miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00104;mir-10;ABAV01011074.1/24648-24715 45351:Nematostella
vectensis (starlet sea anemone)
Length = 68
Score = 135 bits (68), Expect = 1e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 9 cagtatcgacccgtagatccgaacttgtggagtttcaccacaggctcgtttctacggatc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtatcgacccgtagatccgaacttgtggagtttcaccacaggctcgtttctacggatc 60
Query: 69 aaaactgc 76
||||||||
Sbjct: 61 aaaactgc 68
>RF00104;mir-10;ABLF01019923.1/4047-3973 7029:Acyrthosiphon pisum
(pea aphid)
Length = 75
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cgacccgtagatccgaacttgtg 37
|||||||||||||||||||||||
Sbjct: 7 cgacccgtagatccgaacttgtg 29
>RF00104;mir-10;AALT01443654.1/2056-2125 42254:Sorex araneus
(European shrew)
Length = 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;AAPE01049372.1/3456-3524 59463:Myotis lucifugus
(little brown bat)
Length = 69
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;AANU01118946.1/11450-11381 9544:Macaca mulatta
(rhesus monkey)
Length = 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;ABRQ01450213.1/964-1033 9813:Procavia capensis
(cape rock hyrax)
Length = 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;BX284646.4/46761-46692 7955:Danio rerio
(zebrafish)
Length = 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;BX663520.9/232508-232577 7955:Danio rerio
(zebrafish)
Length = 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;BAAF04030492.1/777-846 8090:Oryzias latipes
(Japanese medaka)
Length = 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;AADG05003176.1/74572-74649 7460:Apis mellifera
(honey bee)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgg 30
>RF00104;mir-10;AAJJ01000960.1/12300-12233 7070:Tribolium
castaneum (red flour beetle)
Length = 68
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 acccgtagatccgaacttgtgg 38
||||||||||||||||||||||
Sbjct: 8 acccgtagatccgaacttgtgg 29
