miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 121/130 (93%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| |||||||||||||| |||||| |||||| || ||||||| |||||| |||
Sbjct: 65 atgaatctatacatatatatttat-ctagattcattaacatcaatatgaatgtggg-aaa 122
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 123 tgctagaatg 132
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 149 bits (75), Expect = 1e-35
Identities = 109/119 (91%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 160 atatactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatg 101
Query: 61 ttaatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtggg 119
|||||||||||| |||||||||| ||| |||||| ||||||||| ||||||| ||||||
Sbjct: 100 ttaatgaatctagacatatatatctat-ctagattcattaatatcaatatgaatgtggg 43
Score = 71.9 bits (36), Expect = 3e-12
Identities = 98/116 (84%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||| ||||||||||| ||||||| ||| ||| ||| |||||||| ||
Sbjct: 4 atactccctccgttttacaatgtaagttattctag-ttttcccacattcatattgatatt 62
Query: 63 aatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgg 118
|||||||||| | | |||||| | | |||||| |||||| || ||||||| |||||
Sbjct: 63 aatgaatctagatagatatatatgt-ctagattcattaacatcaatatgaatgtgg 117
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 118/130 (90%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| |||||||||| ||| |||||| |||||| |||||||||| |||||| |||
Sbjct: 65 atgaatctagacatatatatctat-ctagattcattaacattaatatgaatgtggg-aaa 122
Query: 124 tgctaaaatg 133
||||||||||
Sbjct: 123 tgctaaaatg 132
Score = 87.7 bits (44), Expect = 4e-17
Identities = 99/116 (85%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| ||||||||| |||||||| ||| ||| ||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtggg 119
||||||||| | | |||||| | | |||||| |||||| || ||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgt-ctagattcattaacatcaatatgaatgtggg 44
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 118/130 (90%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| |||||||||| ||| |||||| |||||| | |||||||| |||||| |||
Sbjct: 98 atgaatctagacatatatatctat-ctagattcattaacactaatatgaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||||||||||
Sbjct: 40 tgctaaaatg 31
Score = 93.7 bits (47), Expect = 7e-19
Identities = 99/115 (86%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgg 118
||||||||| | | |||||| | | |||||| |||||| |||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgt-ctagattcattaacattaatatgaatgtgg 118
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 117/130 (90%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| |||||||||| ||| |||||| ||||||||| ||||||| |||||| |||
Sbjct: 65 atgaatctagacatatatatctat-ctagattcattaatatcaatatgaatgtggg-aaa 122
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 123 tgctagaatg 132
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/130 (86%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||| |||||||||||||||||||||||||| ||| ||| |||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| | | |||||| | | |||||| |||||| || ||||| | |||||| |||
Sbjct: 98 atgaatctagatagatatatatgt-ctagattcattaacatcaatataaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||| ||||||
Sbjct: 40 tgcaaaaatg 31
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 104/114 (91%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtg 117
||||||||| |||||||||| ||| ||||| ||||||||| ||||||| ||||
Sbjct: 65 atgaatctagacatatatatctat-ttagattcattaatatcaatatgaatgtg 117
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||| |||||| ||||||||||||||||||| || ||| |||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 64 atgaatctaaacatatatat 83
||||||||||| | ||||||
Sbjct: 98 atgaatctaaatagatatat 79
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 135 bits (68), Expect = 2e-31
Identities = 71/72 (98%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgata 90
Query: 61 ttaatgaatcta 72
||||||||||||
Sbjct: 89 ttaatgaatcta 78
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaatc 70
|||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 118/132 (89%), Gaps = 2/132 (1%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||||||| |||| |||||||||||||| || |||||||||||||
Sbjct: 160 tatactccctccgtttcacaatataagccattctagcatttttcacatttatattgatga 101
Query: 62 taatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggca 121
||||||||||| |||||||||| ||| |||||| |||||| || ||||||| |||||| |
Sbjct: 100 taatgaatctagacatatatatctat-ctagattcattaacataaatatgaatgtggg-a 43
Query: 122 aatgctaaaatg 133
||||||| ||||
Sbjct: 42 aatgctacaatg 31
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| ||||||||| |||||||| ||| ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 133 bits (67), Expect = 8e-31
Identities = 116/130 (89%), Gaps = 3/130 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
|||||||||||||||| || | | |||||| |||||| || ||||||| |||||| |||
Sbjct: 97 atgaatctaaacatatgta--tgtgctagattcattaacatcaatatgaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 40 tgctagaatg 31
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 104/115 (90%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgg 118
||||||||| | |||||||||||| |||||| |||||| |||||||||| |||||
Sbjct: 98 atgaatctagatatatatatttat-ctagattcattaacattaatatgaatgtgg 45
Score = 107 bits (54), Expect = 5e-23
Identities = 113/130 (86%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| |||||||||||| | ||||||| ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| | | |||||| ||| |||||| ||||||||| ||||||| |||||| |||
Sbjct: 65 atgaatctagataaatatatatat-ctagattcattaatatcaatatgaatgtggg-aaa 122
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 123 tgctagaatg 132
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 79/83 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 64 atgaatctaaacatatatattta 86
||||||||| |||||||||||||
Sbjct: 98 atgaatctagacatatatattta 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| || ||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63
Query: 63 aat 65
|||
Sbjct: 64 aat 66
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 104/115 (90%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgg 118
||||||||| |||||||||| ||| ||||| ||||||||| ||||||| |||||
Sbjct: 65 atgaatctagacatatatatctat-ttagattcattaatatcaatatgaatgtgg 118
Score = 115 bits (58), Expect = 2e-25
Identities = 114/130 (87%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||||| | |||||| | | |||||| |||||| || | ||||| |||||| |||
Sbjct: 98 atgaatctaaatagatatatatgt-ctagattcattaacatcactatgaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 40 tgctagaatg 31
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 129 bits (65), Expect = 1e-29
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 64 atgaatcta 72
|||||||||
Sbjct: 85 atgaatcta 77
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 9 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaa 68
||||||||||| |||||||||||||||||||||| || |||||||||||||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 69 tcta 72
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 127 bits (64), Expect = 5e-29
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 65 atgaatctagacatatatat 84
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/69 (94%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 98 ataaatcta 90
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 127 bits (64), Expect = 5e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 149 atatactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgata 90
Query: 61 ttaatgaatcta 72
||||||||||||
Sbjct: 89 ttaatgaatcta 78
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaatc 70
|||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 71 ta 72
||
Sbjct: 72 ta 73
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 64 atgaatctaaacatatatat 83
||||||||| || |||||||
Sbjct: 98 atgaatctagacttatatat 79
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||| |||||||||||||| |||| ||| |||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 64 atgaatctaaacatatatat 83
||||||||| |||||||||
Sbjct: 65 atgaatctaggcatatatat 84
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 127 bits (64), Expect = 5e-29
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 96 atgaatctagacatatatat 77
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/69 (94%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 63 ataaatcta 71
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 127 bits (64), Expect = 5e-29
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||
Sbjct: 2 atatacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatg 61
Query: 61 ttaatgaatctaaacatatatatt 84
|||||||||||| |||||||||||
Sbjct: 62 ttaatgaatctagacatatatatt 85
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 64 atgaat 69
||||||
Sbjct: 88 atgaat 83
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 103/115 (89%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||||||||||||||||||| | ||| || ||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 63 aatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtg 117
|||||||||| |||||||||| ||| |||||| |||||| || ||||||| ||||
Sbjct: 99 aatgaatctagacatatatatctat-ctagattcattaacatcaatatgaatgtg 46
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||| |||||||||||||||||||||||||| ||||| || ||| ||||||||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 100/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||| ||
Sbjct: 161 atatactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttg 102
Query: 61 ttaatgaatctaaacatatatatttatcctagatccattaatattaatatg 111
|||||||||||| |||||||||| ||| |||||| |||||| || ||||||
Sbjct: 101 ttaatgaatctagacatatatatctat-ctagattcattaacatcaatatg 52
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 102/114 (89%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||| ||||| ||| ||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtg 117
||||||||| |||||||||| ||| |||||| |||||| || ||||||| ||||
Sbjct: 65 atgaatctagacatatatatctat-ctagattcattaaaatcaatatgaatgtg 117
Score = 111 bits (56), Expect = 3e-24
Identities = 102/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtggg 119
||||||||| | | |||||| | | |||||| ||||||||| ||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgt-ctagattcattaatatcaatatgaatgtggg 44
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 123 bits (62), Expect = 8e-28
Identities = 90/98 (91%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 64 atgaatctaaacatatatatttatcctagatccattaa 101
||||||||| |||||||||| ||| |||||| ||||||
Sbjct: 102 atgaatctagacatatatatctat-ctagattcattaa 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 112/134 (83%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatt----tatattgat 59
|||| |||||||||||||||||||||||||||||||||| |||||| ||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 60 gttaatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtggg 119
||||||||||||| | | |||||| | | |||||| |||||| || | ||||| ||||||
Sbjct: 65 gttaatgaatctagatagatatatatgt-ctagattcattaacatcactatgaatgtggg 123
Query: 120 caaatgctaaaatg 133
|||||||| ||||
Sbjct: 124 -aaatgctagaatg 136
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 8e-28
Identities = 102/114 (89%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtg 117
||||||||| |||||||||| ||| |||||| ||||| ||| ||||||| ||||
Sbjct: 98 atgaatctagacatatatatctat-ctagattcattagtatcaatatgaatgtg 46
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| |||||||||||||||||| || ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 64 atgaatcta 72
|||||||||
Sbjct: 79 atgaatcta 71
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatt 50
||||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagcatttcccatatt 51
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 76/81 (93%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100
Query: 63 aatgaatctaaacatatatat 83
||||||| |||||||||||||
Sbjct: 99 aatgaatttaaacatatatat 79
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 64 atgaatctaaacatatatatttatc 88
||||||||| |||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatc 74
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 63 aatgaatcta 72
||||| ||||
Sbjct: 64 aatgactcta 73
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatt 50
||||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 140 atacttcctccgtttcataatgtaagtcattctagcatttcccatatt 93
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 64 atgaatctaaacatatatatttatc 88
||||||||| |||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatc 89
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcattt 107
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||| ||||||||||| |||| ||||||||||| ||||| ||| ||||| | |||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatttacagtgatgtt 76
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 81 aatgaatcta 72
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| ||||||||||||||| |||||||||||| |||| | | ||| |||||||||
Sbjct: 141 atatacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatg 82
Query: 61 ttaat 65
|||||
Sbjct: 81 ttaat 77
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 117/133 (87%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||||||||||||||||||||| |||||||||| | |||||| ||| |||||||||||||
Sbjct: 2 atatactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatg 61
Query: 61 ttaatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggc 120
|| ||||||||| |||||||| | ||| |||||| |||||| || ||||| | ||||||
Sbjct: 62 tttatgaatctagacatatatttctat-ctagattcattaacatcaatataaatgtggg- 119
Query: 121 aaatgctaaaatg 133
|||||||||||||
Sbjct: 120 aaatgctaaaatg 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||| |||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 64 atgaatctaaacatat 79
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 64 at 65
||
Sbjct: 65 at 66
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 2 atatactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Query: 61 ttaatgaatcta 72
|||||| |||||
Sbjct: 62 ttaatgtatcta 73
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| |||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 148 tatacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgt 89
Query: 62 taatgaatcta 72
||||| |||||
Sbjct: 88 taatgtatcta 78
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 2 atatactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatg 61
Query: 61 ttaatgaatcta 72
|||||||||||
Sbjct: 62 ctaatgaatcta 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 64 atgaat 69
||||||
Sbjct: 86 atgaat 81
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 2 atatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatg 61
Query: 61 ttaatgaatctaaacatatatatttatc 88
|||||||||| |||||||||||||||
Sbjct: 62 ccaatgaatctagacatatatatttatc 89
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||||||| ||||| || || |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 96 atgaatctagacatatatat 77
Score = 117 bits (59), Expect = 5e-26
Identities = 116/133 (87%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||||||| ||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 2 atatacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatg 61
Query: 61 ttaatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggc 120
||||||||| || |||||||||| | |||||| |||||| || ||||||| ||||||
Sbjct: 62 ttaatgaatgtagacatatatatgt---ctagattcattaacatcaatatgaatgtggg- 117
Query: 121 aaatgctaaaatg 133
|||||||| ||||
Sbjct: 118 aaatgctagaatg 130
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 117 bits (59), Expect = 5e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatctaaacatatata 82
||||||||| |||||||||
Sbjct: 65 atgaatctagacatatata 83
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttt 43
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcatttt 101
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||| ||||| ||| ||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaa 101
||||||||| |||||||||| ||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatatctat-ctagattcattaa 101
Score = 81.8 bits (41), Expect = 3e-15
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||||||||||||||||||||||||||||||||| || ||| |||| |||
Sbjct: 159 atacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtt 100
Query: 63 aatgaatctaaacatatatatttatcctagatccattaatattaatatgactgtggg 119
|||||||||| | | |||||| | | |||||| ||||||||| ||||||| ||||||
Sbjct: 99 aatgaatctagatagatatatatgt-ctagattcattaatatcaatatgaatgtggg 44
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 115 bits (58), Expect = 2e-25
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaa 101
||||||||| |||| ||||| ||| |||||| ||||||
Sbjct: 98 atgaatctagacatctatatatat-ctagattcattaa 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||| |||||| || |||||||||||||||| ||||| ||| ||| |||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 64 atgaatctaaacatatata 82
||||||||| | |||||||
Sbjct: 65 atgaatctagatatatata 83
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 64 atgaatctaaacatatat 81
||||||||| | ||||||
Sbjct: 97 atgaatctagatatatat 80
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||||||||| ||||||||||||||||||||||| || ||| ||||||||| |
Sbjct: 4 atacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 64 atgaatctaaacatatat 81
||||||||| ||||||||
Sbjct: 89 atgaatctagacatatat 72
Score = 50.1 bits (25), Expect = 1e-05
Identities = 106/130 (81%), Gaps = 11/130 (8%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||| ||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttccc------acattgatgtta 57
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| | | |||||| | |||||| |||||| || ||||||| | |||| |||
Sbjct: 58 atgaatctagatagatatatgt---ctagattcattaacatcaatatgaatatggg-aaa 113
Query: 124 tgctaaaatg 133
||||||||||
Sbjct: 114 tgctaaaatg 123
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 98/110 (89%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtt 100
Query: 63 aatgaatctaaacatatatatttatcctagatccattaatattaatatga 112
||||||| || |||| ||||| ||| |||||| |||||| || |||||||
Sbjct: 99 aatgaatatagacatctatatctat-ctagattcattaacatcaatatga 51
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 114/130 (87%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
|||||| || |||||||||| ||| |||||| |||||| || ||||||| |||||| |||
Sbjct: 98 atgaatgtagacatatatatctat-ctagattcattaacatcaatatgaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 40 tgctagaatg 31
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 2 atatacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatg 61
Query: 61 ttaatgaat 69
|||||||||
Sbjct: 62 ttaatgaat 70
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||||||||||||||| ||||||||||||| ||| ||||| |||||| |||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcat 32
|||||||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 85 ataaatcta 77
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||| ||||||||||||||||||||||||| |||||||| ||| ||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatctaaacatata 80
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagt 29
|||||||||||||||||||||||||||
Sbjct: 108 atactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 64 atgaatcta 72
|||||||||
Sbjct: 89 atgaatcta 81
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatctaaacat 77
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 79 ataaatcta 71
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
|||||||||| ||||||||||||||||||| ||||||||| || | ||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 63 aatgaatct 71
|||||||||
Sbjct: 97 aatgaatct 89
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 113 bits (57), Expect = 8e-25
Identities = 73/77 (94%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 2 atatactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatg 61
Query: 61 ttaatgaatctaaacat 77
|| ||||||||||||||
Sbjct: 62 tt-atgaatctaaacat 77
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||| |||||||| |||| ||| ||| |||||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 63 aatgaatctaaacatatatatttatcctagatccattaatattaatat 110
|||||||||| |||||||||| ||| |||||| |||||| || |||||
Sbjct: 99 aatgaatctagacatatatatctat-ctagattcattaacatcaatat 53
Score = 103 bits (52), Expect = 7e-22
Identities = 101/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtggg 119
||||||||| | | |||||| | | |||||| ||||||||| ||||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgt-ctagattcattaatatcaatatgaatgtggg 119
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 2 atatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatg 61
Query: 61 ttaatgaatctaaacatatatatttatc 88
|||||||||| |||||||||| ||||
Sbjct: 62 ccaatgaatctagacatatatatctatc 89
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||| ||| | || || ||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||| ||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 64 atgaatctaaacatat 79
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 77.8 bits (39), Expect = 4e-14
Identities = 61/69 (88%), Gaps = 7/69 (10%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattttc-------atattgatgtta 91
Query: 64 atgaatcta 72
|||||||||
Sbjct: 90 atgaatcta 82
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 98 atgaatctagacatatatat 79
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 63 aatgaatctaaacatatata 82
||||||||||| |||||||
Sbjct: 99 gatgaatctaaatatatata 80
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||| ||||||||||| || ||||| || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 64 atgaatctaaacatatatat 83
||||||||| |||| |||||
Sbjct: 65 atgaatctagacatctatat 84
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 64 atgaatctaaacatat 79
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 64 at 65
||
Sbjct: 65 at 66
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| |
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94
Query: 63 aatgaatctaaacatatat 81
|||||||||| | ||||||
Sbjct: 93 aatgaatctagagatatat 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| |||||||| || ||||| ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 4 atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 63 aatgaatctaaacat 77
|||||||||| ||||
Sbjct: 64 aatgaatctagacat 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||| |||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 63 aatgaatctaaacatata 80
|||||||||| |||||||
Sbjct: 64 aatgaatctagacatata 81
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||
Sbjct: 140 atactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/130 (86%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||| ||||||||| |||||||||||||| | ||||| ||| ||| ||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| |||||||||| ||| |||||| |||||| | ||||||| |||||| |||
Sbjct: 98 atgaatctagacatatatatctat-ctagattcattaacaacaatatgaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 40 tgctagaatg 31
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 64 at 65
||
Sbjct: 65 at 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||| ||||||||||||||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| ||||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 64 atgaa 68
|||||
Sbjct: 89 atgaa 85
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 64 atgaatctaaacata 78
||||| ||| |||||
Sbjct: 86 atgaaactagacata 72
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||| |||||| |||||||||||| ||||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 64 atgaatctaaacatatatatttatc 88
|||||||||||||||||||| ||||
Sbjct: 98 atgaatctaaacatatatatctatc 74
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||| |||| | ||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 64 atgaatcta 72
|||||||||
Sbjct: 70 atgaatcta 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||| |||||||||| ||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 64 at 65
||
Sbjct: 61 at 62
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 134 atatacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatg 75
Query: 61 ttaatgaat 69
|||||||||
Sbjct: 74 ttaatgaat 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttc 44
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttc 45
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||| || |
Sbjct: 137 tatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatat 78
Query: 62 taatgaatctaaacatatata 82
||||||||||| |||||||||
Sbjct: 77 taatgaatctagacatatata 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatatt 56
||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||
Sbjct: 4 atactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 64 atgaatcta 72
|||||||||
Sbjct: 76 atgaatcta 68
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
|||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 64 atgaatcta 72
|||||||||
Sbjct: 74 atgaatcta 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
|||||||||||||||| |||||||||||||||| ||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||||||||| ||||||||||||| || ||| |||||||||
Sbjct: 2 atatactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatg 61
Query: 61 ttaatgaatcta 72
|||||||||||
Sbjct: 62 ctaatgaatcta 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||| ||||| |||||||||| | ||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 64 atgaat 69
||||||
Sbjct: 86 atgaat 81
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 103 bits (52), Expect = 7e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||||||||||||| || ||| ||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 64 atgaatctaaacatatatat 83
||||||||| | ||||||||
Sbjct: 96 atgaatctagatatatatat 77
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| ||||||||||||||| ||||||||||| |||||| ||| ||| ||| | |||||
Sbjct: 4 atacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtt 63
Query: 63 aatgaatctaaacatatatat 83
||||||| || ||||||||||
Sbjct: 64 aatgaatttagacatatatat 84
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 64 atga 67
||||
Sbjct: 92 atga 89
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||| | ||| |||||||||||| ||| ||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||
Sbjct: 124 atatactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatg 65
Query: 61 ttaatgaa 68
||||||||
Sbjct: 64 ttaatgaa 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatatt 56
|||| ||||||||||||||||||||||||| |||||||| ||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 101 bits (51), Expect = 3e-21
Identities = 89/101 (88%), Gaps = 3/101 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 64 atgaatctaaacatatatatttatcctagatccattaatat 104
||| ||||| |||||||| | | ||||||||||||||||
Sbjct: 69 atggatctagacatatatctat---ctagatccattaatat 32
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagt 29
|||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaatc 70
|||||||
Sbjct: 65 atgaatc 71
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 64 atgaatc 70
|||||||
Sbjct: 81 atgaatc 75
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 64 atgaatctaaa 74
|||||||||||
Sbjct: 66 atgaatctaaa 56
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatatt 56
|||| ||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||
Sbjct: 160 tatactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgt 101
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| ||||||||||||||||||||| ||| || |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 62 taatgaatcta 72
||||||||||
Sbjct: 63 caatgaatcta 73
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 64 atgaatc 70
|||||||
Sbjct: 65 atgaatc 71
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 64 atgaatc 70
|||||||
Sbjct: 78 atgaatc 72
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatg 66
|||||||||||||||||||||||||||||||||||| || ||| |||||||||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 67 aatctaaacatatat 81
|||||| ||||||||
Sbjct: 95 aatctagacatatat 81
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcat 40
||||||||||||||||||||||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 9 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaa 68
||||||||||||||| ||||||||| ||||||||||| |||| ||||||||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 69 tctaaacatatatat 83
|||| ||||||||||
Sbjct: 67 tctagacatatatat 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 gtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| |||||||||||||||| | ||| ||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 64 atgaatctaaacat 77
||||||||||||||
Sbjct: 72 atgaatctaaacat 59
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||||||| |||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 137 tatactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgt 78
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 77 taatgaatcta 67
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/130 (86%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||| |||||||| || || ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| |||||||||| | |||||| ||||||||| | ||||| |||||| |||
Sbjct: 98 atgaatctagacatatatatccgt-ctagattcattaatataagtatgaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 40 tgctagaatg 31
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| |||||||||||||||||||||||||||||||||| ||| ||| ||| | || |
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatat 62
Query: 62 taatgaatcta 72
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/130 (86%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| ||||||||| ||| |||| ||| ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaaa 123
||||||||| | |||||||| ||| |||||| |||||| | ||||||| |||||| |||
Sbjct: 98 atgaatctagaaatatatatctat-ctagattcattaacgtcaatatgaatgtggg-aaa 41
Query: 124 tgctaaaatg 133
||||| ||||
Sbjct: 40 tgctagaatg 31
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||| |||||||||| |||| ||||||||| ||| ||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 64 atgaatctaaacatatat 81
||||||||| | ||||||
Sbjct: 70 atgaatctagatatatat 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
|||||||||||||||||||||||| |||||| | |||||||| |||||| ||||
Sbjct: 2 atatactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 64 at 65
||
Sbjct: 65 at 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||| ||||||||||||||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||| | | ||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 64 atgaatctaaacatatat 81
||||||||| ||||||||
Sbjct: 92 atgaatctagacatatat 75
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 97.6 bits (49), Expect = 5e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 64 a 64
|
Sbjct: 65 a 65
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 125 atatacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatg 66
Query: 61 ttaa 64
||||
Sbjct: 65 ttaa 62
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||||||||| | | ||| ||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 63 atgaatcta 55
Score = 87.7 bits (44), Expect = 4e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatt 50
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttccatatt 51
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 64 atgaatcta 72
|||||||||
Sbjct: 76 atgaatcta 68
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||| ||||||||||||||||||||| ||||||| |||| |||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||||||| ||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 64 atgaatctaaacatata 80
||||||||||| |||||
Sbjct: 98 atgaatctaaatatata 82
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | |||||||||| ||| ||| || | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 64 atgaatctaaacat 77
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
|||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| || ||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 64 atgaa 68
|||||
Sbjct: 91 atgaa 87
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||||||| |||||||||||| |||| ||| ||| ||||||||||
Sbjct: 3 tatactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgt 62
Query: 62 taatgaa 68
|||||||
Sbjct: 63 taatgaa 69
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 64 atgaatcta 72
|||||||||
Sbjct: 92 atgaatcta 84
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| |||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 3 tatacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgt 62
Query: 62 taatgaatctaaacat 77
|||||||||| ||||
Sbjct: 63 caatgaatctagacat 78
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 64 atgaatcta 72
|||||||||
Sbjct: 70 atgaatcta 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||| ||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtattt 43
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| || ||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtc 84
Query: 63 aatg 66
||||
Sbjct: 83 aatg 80
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 64 atgaatctaaacatata 80
||||||||| |||||||
Sbjct: 79 atgaatctagacatata 63
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||| |||||||||| |||||||| | |||||||||| ||||||||||||| ||||||
Sbjct: 138 atactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtt 79
Query: 63 aatgaatctaaacata 78
|||||||||| |||||
Sbjct: 78 aatgaatctagacata 63
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 64 atgaatct 71
||||||||
Sbjct: 65 atgaatct 72
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 64 at 65
||
Sbjct: 77 at 76
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 95.6 bits (48), Expect = 2e-19
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 26 aagtcattctagcattttccatatttatattgatgttaatgaatctaaacatatatattt 85
||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 86 atcctagatccattaatattaatatgactgtg 117
|| |||||| |||||| || ||||||| ||||
Sbjct: 50 at-ctagattcattaacatcaatatgaatgtg 20
Score = 71.9 bits (36), Expect = 3e-12
Identities = 92/108 (85%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 26 aagtcattctagcattttccatatttatattgatgttaatgaatctaaacatatatattt 85
||||||||||||||||| || ||| ||||||||||||||||||||| | | |||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 86 atcctagatccattaatattaatatgactgtgggcaaatgctaaaatg 133
| |||||| |||||| || ||||||| |||||| |||||||| ||||
Sbjct: 61 gt-ctagattcattaacatcaatatgaatgtggg-aaatgctagaatg 106
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||||||||||||||| |||||||| |||||||| ||||||| |||||||||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 63 aatgaatctaaacatatata 82
||| |||||| |||| ||||
Sbjct: 77 aataaatctagacatttata 58
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||||||||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtattt 43
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 95.6 bits (48), Expect = 2e-19
Identities = 95/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 26 aagtcattctagcattttccatatttatattgatgttaatgaatctaaacatatatattt 85
||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 86 atcctagatccattaatattaatatgactgtgggcaaatgctaaaatg 133
|| ||||| |||||| || ||||||| |||||| |||||||| ||||
Sbjct: 61 at-ttagattcattaacatcaatatgaatgtggg-aaatgctagaatg 106
Score = 87.7 bits (44), Expect = 4e-17
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 26 aagtcattctagcattttccatatttatattgatgttaatgaatctaaacatatatattt 85
||||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 86 atcctagatccattaatattaatatgactgtgggcaaatgctaaaatg 133
| |||||| |||||| || ||||||| |||||| |||||||| ||||
Sbjct: 50 gt-ctagattcattaacatcaatatgaatgtggg-aaatgctagaatg 5
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 93.7 bits (47), Expect = 7e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||||||||||||||||||| | |||||||||| |||| ||| || | ||||
Sbjct: 2 atatacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatg 61
Query: 61 ttaatgaatctaaacatatatat 83
|||||||||||| ||||||||||
Sbjct: 62 ttaatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 5 actccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaa 64
||||||||||||||| |||||||||||||||||||||| ||| ||| |||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 65 tgaatctaaacatatatat 83
|||||||| ||||||||||
Sbjct: 97 tgaatctagacatatatat 79
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||||||||| | ||||| |||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 64 atgaatcta 72
||||||||
Sbjct: 65 gtgaatcta 73
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||
Sbjct: 105 atactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatttt 43
|||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttt 44
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 63 aatgaatctaa 73
| |||||||||
Sbjct: 64 agtgaatctaa 74
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| |||||| ||||||||||||| ||||||||| || ||| | | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 64 atgaatctaaacatatata 82
|||||||| |||||||||
Sbjct: 98 gtgaatctagacatatata 80
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 64 atgaatc 70
|||||||
Sbjct: 74 atgaatc 68
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| ||||||||||||||||||||||| | |||||||||| ||| ||||||||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||||||||||| | ||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 64 atgaatctaaacata 78
||||||||| |||||
Sbjct: 65 atgaatctagacata 79
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| ||||||||||||||||||| | || ||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 2 atatactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttata 54
|||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 12 ccgtttcacaatgtaagtcattctagcattttccatatttatat 55
||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatg 66
|||||||||||||||||||||||||||||||||||| || ||| ||||| |||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 67 aatctaaacatata 80
|||||| |||||||
Sbjct: 75 aatctagacatata 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||| ||| ||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 64 atgaatctaaacatatat 81
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||| ||||||| | |||||| | | ||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| | | ||| ||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 64 atgaat 69
||||||
Sbjct: 54 atgaat 49
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||||||||||| |||||| || || ||||||||| |
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 72 aatgaatcta 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattt 42
||||||||||||||||| |||||||||||| |||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcattt 43
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 84 ataaatcta 76
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| ||||||||||| |||||||||||||||||||||| ||| ||| |||||||| ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 56 aatgaatcta 47
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcat 40
|||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 140 atactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/75 (86%), Gaps = 8/75 (10%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttcc--------atatttata 54
||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagtattttccacatcaatatatttata 63
Query: 55 ttgatgttaatgaat 69
|||||||||||||||
Sbjct: 64 ttgatgttaatgaat 78
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||| ||||||||||||| ||||| ||||||||| ||||||||||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 64 atgaatcta 72
|||||||||
Sbjct: 46 atgaatcta 38
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcatt 33
||||| |||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||| ||||||||| ||||||||||| |||| ||| |||| |||||
Sbjct: 139 tatactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgt 80
Query: 62 taatgaatctaaacata 78
|||| |||||| |||||
Sbjct: 79 taataaatctagacata 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||| ||||||||||| ||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcatt 42
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| | ||||||||||||| ||||||||| ||||||||| |||||||| ||| |||
Sbjct: 2 atatacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatg 61
Query: 61 ttaatgaatctaaacatatat 81
|||||||||||| ||| ||||
Sbjct: 62 ttaatgaatctagacagatat 82
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 8 ccctccgtttcacaatgtaagtcattctagcatttt 43
|||||||||||||||| ||||||||| || ||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttt 91
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcat-tctagcattttccatatttatattgatgtt 62
||||||||||||||||||||||||||||| | |||||||| ||| ||| ||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 63 aatg 66
||||
Sbjct: 83 aatg 80
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
|||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||| ||| ||| ||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 64 atgaatcta 72
|||||||||
Sbjct: 72 atgaatcta 64
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||| || ||||| ||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||| |||||| |||||||||||||||||| | ||||| ||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 64 atgaatcta 72
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||||||||||| | ||||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| ||||||||||||||||||| | || ||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 64 atgaatcta 72
|||||||||
Sbjct: 83 atgaatcta 75
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcat-tctagcattttccatatttatattgatgtt 62
||||||||||||||||||||||||||||| | |||||||| ||| ||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 63 aatg 66
||||
Sbjct: 65 aatg 68
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 81.8 bits (41), Expect = 3e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
|||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||| |||||| |||||||||||||||||| | ||||| ||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||| || ||||| ||| ||| ||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 64 atgaatcta 72
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||| ||| ||| ||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 133 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||| ||||||||||||| ||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcattt 90
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 64 atgaa 68
|||||
Sbjct: 65 atgaa 69
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattct 35
|||||||| |||||||||||| ||||||||||
Sbjct: 100 tactcccttcgtttcacaatgcaagtcattct 69
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||||||||||||| ||| |||| || ||| ||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 64 atgaatcta 72
|||||||||
Sbjct: 87 atgaatcta 79
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| |||||||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtta 64
Query: 64 at 65
||
Sbjct: 65 at 66
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| ||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 64 atgaatcta 72
|||||||||
Sbjct: 70 atgaatcta 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
||||||||||||||||||||||||||||||| | | |||||||| ||| ||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 64 a 64
|
Sbjct: 65 a 65
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 63 aatga 67
|||||
Sbjct: 71 aatga 67
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| |||||||||||||||||| || ||| ||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 64 atgaatcta 72
|||||||||
Sbjct: 67 atgaatcta 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
|||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagt-cattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||| | |||| ||||| ||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 65 aatgaatcta 74
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| |||||||| ||| ||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 64 atgaatctaaacatatatat 83
||||||| | ||||||||||
Sbjct: 65 atgaatcaagacatatatat 84
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||| |||||||| ||||||||| || ||| |||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 64 atgaatctaaacatatatat 83
||||||||| |||||||||
Sbjct: 96 atgaatctatgcatatatat 77
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||| ||||||| ||| ||| |||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 64 atgaatctaaacatat 79
||||||||||||||||
Sbjct: 98 atgaatctaaacatat 83
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||||||||||||| || |||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||| |
Sbjct: 132 tatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtac 73
Query: 62 taatgaatctaaacatatat 81
||||||||||| ||||||||
Sbjct: 72 taatgaatctagacatatat 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcattt 43
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
||||||||||||||||||||||||||| | || ||| ||| |||| ||| |||| |||||
Sbjct: 160 tatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 101
Query: 62 taatgaatctaaacatatatatttatc 88
||||||||||| |||||| ||| ||||
Sbjct: 100 taatgaatctagacatatgtatatatc 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||| |||| | |||||| ||| ||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 64 atgaa 68
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| ||||| ||||| ||||||||||||||||||||| || ||| |||| ||||
Sbjct: 135 atatacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatg 76
Query: 61 ttaatgaatctaaacatatatat 83
|||||||||||| ||||||||||
Sbjct: 75 ttaatgaatctagacatatatat 53
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcatt 41
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 atatactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatt 50
||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatatt 51
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttcca 46
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttcca 74
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattga 58
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattctagcatt 41
||||||||||||| |||||||||||||||||
Sbjct: 97 tccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
||||||||||||||||||||||||||| |||||||||| ||| || || || |||||
Sbjct: 3 tatactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgt 62
Query: 62 taatgaatctaaacatata 80
|||||||||||||||||||
Sbjct: 63 taatgaatctaaacatata 81
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| ||||||||||| ||||||||||||||||| |||| || ||| |||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 63 aatgaatctaaacatatat 81
|||||||||| ||| ||||
Sbjct: 64 aatgaatctagacaaatat 82
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||| ||||| ||||||||||||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcattt 92
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
||||||||||||||||||||||||||| | || ||| ||| |||| ||| |||| |||||
Sbjct: 3 tatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 62
Query: 62 taatgaatctaaacatatatatttatc 88
||||||||||| |||||| ||| ||||
Sbjct: 63 taatgaatctagacatatgtatatatc 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||| |||| | |||||| ||| ||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 64 atgaa 68
|||||
Sbjct: 98 atgaa 94
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 64 atgaatctaaacata 78
|| ||| || |||||
Sbjct: 65 ataaatttatacata 79
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcatt 33
|||||||||||||||||||||||||| ||||
Sbjct: 111 atactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 64 atg 66
|||
Sbjct: 65 atg 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 2 atatactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 15 tttcacaatgtaagtcattctagcattttccatatttatattga 58
||||||||| |||||||||||||||||| ||| ||| |||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 101/119 (84%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | |||||||||| |||||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaa 122
||||||||| ||| |||||| | | |||||| |||||| || |||||| |||||||||
Sbjct: 98 atgaatctagacacatatatatgt-ctagattcattaacatctatatgaatgtgggcaa 41
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||||| |||||| ||| ||| ||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||||||||||||||||| | | ||| |||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 64 atgaat 69
||||||
Sbjct: 66 atgaat 61
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt-cacatccatattgatgtta 63
Query: 64 atgaat 69
||||||
Sbjct: 64 atgaat 69
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 8 ccctccgtttcacaatgtaagtcattctagcattttc 44
|||||||||||||||||||||||||||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattttc 72
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||| ||| ||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 64 atgaatctaaacatatat 81
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||| | | ||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 64 atgaat 69
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatg 66
||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 67 aatcta 72
||||||
Sbjct: 68 aatcta 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| ||||||||| ||||||||| || ||| || |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||||||||||||||| |||||||||||| ||||| || ||||||||||||
Sbjct: 111 atatacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgata 52
Query: 61 ttaat 65
|||||
Sbjct: 51 ttaat 47
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattcta 36
|||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||||| |||||||||| ||| ||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 64 atgaatctaaacatata 80
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||||| |||||||| | ||||||||||
Sbjct: 124 tatactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||||||||||||| ||||||||| || | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 64 atgaatcta 72
|||||||||
Sbjct: 70 atgaatcta 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
|||||||||||||| ||||||||||||||| ||| |||| ||| ||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||| ||||||||| ||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcattt 69
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
||||| |||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 109 atacttcctccgtttcacaatgtaagtcattctagcattttccacaattatat 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | |||||||||| | ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||| | |||||||||| |||| ||| |||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 64 atgaatcta 72
|||||||||
Sbjct: 96 atgaatcta 88
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||||||||||||||||||||| | | ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| ||||||||||||||||||||| ||| || ||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 64 atgaat 69
||||||
Sbjct: 98 atgaat 93
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||||||| |||| ||| |||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 64 atgaatcta 72
|| ||||||
Sbjct: 80 ataaatcta 72
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||||||||||||||||||||||||||| | || ||||||| |||||||| |||| ||||
Sbjct: 2 atatactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatg 61
Query: 61 t 61
|
Sbjct: 62 t 62
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| |||||| ||||||||||||||||| |||| ||| ||| ||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 64 atgaatctaaacatatatatt 84
|| |||||| | |||||||||
Sbjct: 84 ataaatctagatatatatatt 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| ||||||||||||||||||||||| || ||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 64 at 65
||
Sbjct: 65 at 66
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||| | |||||||||||||||| ||||||||| ||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 64 atgaatctaaacatata 80
|||||||| |||||||
Sbjct: 78 gtgaatctagacatata 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||| |||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacattt 43
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||| ||||||| |||||| || ||| ||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 64 atgaatcta 72
|||||||||
Sbjct: 70 atgaatcta 62
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
|||||||||||||||||||| |||||||||||||||||| ||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| ||||||||||||| ||||| |||||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||||||| |||||||||||||||||||||||||| || ||| ||| ||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||| |||||| ||| |||||||||||||||||||||| ||| ||| |||||
Sbjct: 2 atatacttcctctgtttcataatataagtcattctagcattttccacattcatactgatg 61
Query: 61 ttaatgaatcta 72
|||||||||||
Sbjct: 62 ctaatgaatcta 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||| ||||||||||||| |||||||| ||| ||| ||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| |||||||||||||||||| || ||| ||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 64 atgaatct 71
||||||||
Sbjct: 75 atgaatct 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| ||||||| ||||||||||||||||||||| || ||| ||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| ||||||||||||||| | |||||||||| ||| ||| || | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 64 atgaatctaaacatat 79
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt--ttccatatttatattgatgt 61
||||||||||||||||||||||||| | || ||||||| | |||| ||||| ||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 62 taatgaatctaaaca 76
|||||||||||||||
Sbjct: 100 taatgaatctaaaca 86
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| |||||| |||||||| | |||||||||| |||| ||| |||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 64 atgaatctaaacatatatat 83
||||||||| |||| |||||
Sbjct: 72 atgaatctagacatctatat 53
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||| | |||||||||| ||| || |||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 64 atgaatctaaacatat 79
||||||||||||||||
Sbjct: 76 atgaatctaaacatat 61
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||| | |||||||||| ||| || |||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 64 atgaatctaaacatat 79
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| |||||||||||||||||| ||| ||| | |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 64 atgaatct 71
||||||||
Sbjct: 75 atgaatct 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| |||||||||||||||||| || ||| | |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 64 atga 67
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | |||||||||| ||||||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 64 atgaatctaaacatat 79
||||||||| ||||||
Sbjct: 65 atgaatctagacatat 80
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||| | |||||| ||| ||| | |||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 63 aatgaatctaaa 74
||||||||||||
Sbjct: 99 aatgaatctaaa 88
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcatt 41
||||||||||||||||||||||||| |||||||||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| ||||||||| ||||| |||||||||||||||||| || |||||||||||||
Sbjct: 96 atatacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatg 37
Query: 61 ttaatga 67
| |||||
Sbjct: 36 taaatga 30
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcatt 33
|||||||| |||||||||||||| |||||||||
Sbjct: 2 atatactctctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| ||||||||||| |||||||| | |||||||||| || | ||| |||| ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtt 63
Query: 63 aatgaatctaaacatatat 81
|||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatat 82
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | |||||| || |||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 64 atgaatctaaaca 76
|||||||||||||
Sbjct: 98 atgaatctaaaca 86
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 59
||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||
Sbjct: 2 atatactccctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattga 58
|||| ||||||||||||||| |||||||||||||||||| ||| ||| |||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||||||||||||||| ||| ||||| || ||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattga 58
|||||||||| ||||| ||||||||||||||||| ||||| || ||| |||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||| |||||||||||||||||| ||||||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatatt 56
|||| ||||||||||||||| |||||||||||||||||| ||| ||| |||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattt 42
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 129 atatacttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||||||| ||||| |||||||||||| ||| ||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
|||||||||||| |||||| ||||||||||||| || |||||| || |||||||||||||
Sbjct: 146 atatactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcat 40
|||||||||||||||||||||||||||| ||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||||||||||||||||||| | |||||||||| ||| ||| || | |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 63 aatgaatctaaacatat 79
|||||||||| ||||||
Sbjct: 99 aatgaatctagacatat 83
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | |||||||||| ||| || |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 64 atgaatctaaaca 76
|||||||||||||
Sbjct: 65 atgaatctaaaca 77
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||||| |||||||||| ||| ||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||| |||||||| | || ||||||| ||||| || | |||||
Sbjct: 158 tatactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgt 99
Query: 62 taatgaatctaaacatat 79
||||||||||| ||||||
Sbjct: 98 taatgaatctagacatat 81
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatg 66
|||||||||||||||||||||| | |||||| ||| |||| |||||| | ||||||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 67 aatct 71
|||||
Sbjct: 55 aatct 51
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttcca 46
||||||||||||||||||||||||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattgtcca 47
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||||||| ||||| |||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 64 atgaatctaaaca 76
|||||||||||||
Sbjct: 65 atgaatctaaaca 77
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | || ||||||| ||||||| || | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 64 atgaatctaaacatat 79
||||||||| ||||||
Sbjct: 98 atgaatctagacatat 83
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcattttccacctttataaggatgtt 63
Query: 63 a 63
|
Sbjct: 64 a 64
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||| ||||||| ||||||||||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcattt 108
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||||||| ||||||||||||| |||| ||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 97/116 (83%), Gaps = 4/116 (3%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||| | ||||| ||| ||| ||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtggg 119
||| ||||| || ||||| ||| |||||| ||||| ||| ||||||| ||||||
Sbjct: 95 atggatctagac---tatatctat-ctagattcattagtatcaatatgaatgtggg 44
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||||||| || ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||||||| | |||||||||| ||| ||| | || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 64 atgaatctaaacatatata 82
||||||||| ||| |||||
Sbjct: 65 atgaatctagacacatata 83
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | |||||||||| ||| ||| |||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 64 atgaatcta 72
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 9 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaa 68
||||||||||| ||| ||||||||||||||||| ||| ||| |||| ||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 69 tctaaacatatat 81
||| ||||||||
Sbjct: 70 tctggacatatat 82
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctag 37
|||||||||||||||||||| |||||||||||||
Sbjct: 156 tactccctccgtttcacaatataagtcattctag 123
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||| |||||||| | |||||||||| ||| ||| |||| |||||
Sbjct: 3 tatactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Query: 62 taatgaat 69
||||||||
Sbjct: 63 taatgaat 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcatt 105
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
|||||||||||||||| |||||||||||||||||||||| ||| || |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacatctatat 77
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttcca 46
||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagtattttcca 47
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggattt 101
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
||||||||||||||||||||||||||| | ||||| |||| ||| ||| |||| ||||
Sbjct: 160 tatactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgc 101
Query: 62 taatgaatctaaacat 77
||||||||||| ||||
Sbjct: 100 taatgaatctagacat 85
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | |||||||||| ||| ||| |||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 64 atgaatctaaacatat 79
|| |||||| ||||||
Sbjct: 74 ataaatctagacatat 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||| | |||||| | ||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| ||||||||||| |||||||| | |||||||||| ||| ||| |||| |||||
Sbjct: 160 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 101
Query: 62 taatgaatctaaacatatat 81
||||||||||| | ||||||
Sbjct: 100 taatgaatctagaaatatat 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 98/119 (82%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | || ||||||| || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaa 122
||||||||| ||| | |||| | | |||||| |||||| || |||||| |||||||||
Sbjct: 65 atgaatctagacacacatatat-ttctagattcattaacatctatatgaatgtgggcaa 122
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||| ||||| |||||||| | |||||||||| |||| ||| |||| ||||
Sbjct: 2 atatactccctccatttcataatgtaagactttctagcattgtccacattcatatagatg 61
Query: 61 ttaatgaatcta 72
||||| ||||||
Sbjct: 62 ttaataaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcatt 41
||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 127 atatactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||| ||||||||||| |||||||| | |||||||||| ||| ||| |||| |||||
Sbjct: 3 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Query: 62 taatgaatctaaacatatat 81
||||||||||| | ||||||
Sbjct: 63 taatgaatctagaaatatat 82
Score = 61.9 bits (31), Expect = 3e-09
Identities = 98/119 (82%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | || ||||||| || ||| |||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaa 122
||||||||| ||| | |||| | | |||||| |||||| || |||||| |||||||||
Sbjct: 98 atgaatctagacacacatatat-ttctagattcattaacatctatatgaatgtgggcaa 41
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 10 ctccgtttcacaatgtaagtcattctagcattttccatatttat 53
|||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 83 ctccgtttcacaatataagtcattctagcattttctatatttat 40
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcat 40
||||| ||||||||||||| ||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacagtgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||||||||||||||||||| | |||||||| || ||| ||| || | ||||
Sbjct: 142 atatacttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatg 84
Query: 61 ttaatgaatctaaacatat 79
||| |||||||||||||||
Sbjct: 83 ttattgaatctaaacatat 65
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcatt 41
||||||| ||||||||||||||| |||| | ||||||||||
Sbjct: 2 atatacttcctccgtttcacaatctaagcctttctagcatt 42
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttcca 46
|||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttcca 47
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagc 38
|||||||||||||||||||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattt 42
||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 2 atatacttcctccgttccacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 99/119 (83%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | | |||||||| || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaa 122
||||||||| ||| | |||| ||| |||||| |||||| || || ||| |||||||||
Sbjct: 65 atgaatctagacacacatatatat-ctagattcattaacatctatgtgaatgtgggcaa 122
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | || || |||| ||| ||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 64 atgaatctaaacatatat 81
||||||||| | ||||||
Sbjct: 98 atgaatctagatatatat 81
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcattt 57
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcattt 43
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatg 66
||||||||||||| |||||||| | |||||||||| |||| ||| |||| |||||||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 67 aatcta 72
||||||
Sbjct: 45 aatcta 40
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
|||||||||| |||||| ||||||| ||||||||||||| ||| || |||| ||||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 73 aatgaatcta 64
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 7 tccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatg 66
||||||||||||| |||||||| | |||||||||| ||||||| |||| |||||||| |
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 67 aatcta 72
||||||
Sbjct: 68 aatcta 73
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||||||||||| ||| |||||| |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 64 atgaatctaaacatatat 81
||||||||| || |||||
Sbjct: 65 atgaatctagacttatat 82
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcatt 99
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| ||| |||| | |||||||||| ||||||| |||| |||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 64 atgaatcta 72
|||||||||
Sbjct: 80 atgaatcta 72
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||| |||||| ||| |||||| |||||||||| |||||| |||| |||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | |||||||||| || || |||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 64 atgaatctaaaca 76
|||||||||||||
Sbjct: 98 atgaatctaaaca 86
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 25 taagtcattctagcattttccatatttatattgatgttaatgaatctaaacatatat 81
|||||||||||||||||| || ||| ||||||||| ||||||||||| ||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 21 aatgtaagtcattctagcattttccatatttatattgatgttaatgaat 69
|||||||||||||||||||||| || ||| ||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 10 ctccgtttcacaatgtaagtcattctagcattt 42
|||||||||||||||||||||||||||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcattt 51
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctag 37
||||| |||||||||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| |||| ||||||| ||||| |||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 64 atgaatctaaaca 76
|||||| ||||||
Sbjct: 77 atgaatttaaaca 65
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| |||| ||||||| ||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 64 atgaatctaaaca 76
|||||| ||||||
Sbjct: 65 atgaatttaaaca 77
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | |||||||||| ||| || |||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 64 atgaatcta 72
|||||||||
Sbjct: 87 atgaatcta 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| |||||| |||||||| | |||||||||| ||| |||| ||| |||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 64 atgaatcta 72
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | || ||||||| |||| |||||| | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 64 atgaatcta 72
|||||||||
Sbjct: 96 atgaatcta 88
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||| |||||||| | ||||| |||| |||| | ||||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctaccattgtccaca--tatatagatgtt 61
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 62 aatgaatcta 71
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | |||||||||| ||| || || | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 64 atgaatctaaacatata 80
|| |||||| |||||||
Sbjct: 98 ataaatctagacatata 82
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| |||||||||||||||||||| | || ||| ||| | ||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 64 atgaatctaaacatat 79
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| | | |||| | |||||| ||| ||||| || |||| ||||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 64 atgaatctaaacatatatat 83
||||||||||||| ||||||
Sbjct: 98 atgaatctaaacacatatat 79
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||| ||||| |||| | ||||| |||| ||| || ||||| |||||||
Sbjct: 134 tactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtta 75
Query: 64 atgaatctaaacatatatat 83
||||||||||||| ||||||
Sbjct: 74 atgaatctaaacacatatat 55
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||||||||||||||| | | |||| | |||||||||| ||| ||| |||| ||||
Sbjct: 163 atatactccctccgtttcatattataagactttctagcattgcccacattcatatagatg 104
Query: 61 ttaatgaatcta 72
||||||||||||
Sbjct: 103 ttaatgaatcta 92
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| ||||||||||| | | |||| | |||||||||| ||| ||| |||| ||||
Sbjct: 2 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 61
Query: 61 ttaatgaatctaaacatatat 81
|||||||||||| | ||||||
Sbjct: 62 ttaatgaatctatatatatat 82
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| | | |||| | |||||||||| ||| ||| |||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 72 atgaatctagacatatatat 53
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 63.9 bits (32), Expect = 6e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 30 cattctagcattttccatatttatattgatgttaatgaatctaaacatatatatttatcc 89
||||||||||||||||| ||| |||| | |||||||||||||| |||| ||||| ||| |
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatat-c 59
Query: 90 tagatccattaa 101
||||| ||||||
Sbjct: 60 tagattcattaa 71
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| |||| ||| | |||||||||| ||| ||| || | |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 64 atgaatctaaacatatatat 83
||||||||||||| ||||||
Sbjct: 65 atgaatctaaacacatatat 84
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||||||||||||||||||| | ||||| |||| | || | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtta 99
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 98 atgaatctagacatatatat 79
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||||||||||||||||||| | || |||| || ||| ||| || | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 63 aatgaatctaaacatatatattta 86
|||||||||| |||||| ||||||
Sbjct: 64 aatgaatctagacatatgtattta 87
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
||||||||||||||||||| |||||||| | || |||||| |||||||||||||
Sbjct: 2 atatactccctccgtttcataatgtaagactttttagcatcgtccatatttatat 56
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 55
||||||||||||||||||||||| |||| | || |||||| |||||||||||||
Sbjct: 2 atatactccctccgtttcacaatataagactttttagcatcgtccatatttatat 56
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 26 aagtcattctagcattttccatatttatattgatgttaatgaatcta 72
||||||||||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 26 aagtcattctagcattttccatatttatattgatgttaatgaatcta 72
||||||||||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 77
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 98/119 (82%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
||||||||| |||||| |||||||| | || ||||||| ||| ||| |||| ||| | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 64 atgaatctaaacatatatatttatcctagatccattaatattaatatgactgtgggcaa 122
|||||||||||||||||| | | | |||||| |||||| || |||||| |||||||||
Sbjct: 98 atgaatctaaacatatatgtgtgt-ctagattcattaacatatatatgaatgtgggcaa 41
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||| |||| |||||| |||||||| | ||||||| || ||| ||| |||| |||||
Sbjct: 4 atacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtt 63
Query: 63 aatgaatcta 72
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcatt 33
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatatt 56
|||| ||||||||||||||||||||||||| ||| |||| ||| ||| |||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||| |||||||||| ||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcatt 46
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagc 38
||||||| ||||||||||| |||||||||| |||||||
Sbjct: 2 atatacttcctccgtttcataatgtaagtctttctagc 39
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||| | | |||| | ||||| |||| ||| ||| |||| |||| |
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
Query: 63 aatgaatctaaacatatatat 83
|||||||||| ||||||||||
Sbjct: 79 aatgaatctagacatatatat 59
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| |||| |||||| |||||||| | ||||||| || ||| |||||||| |||
Sbjct: 2 atatacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagata 61
Query: 61 ttaatgaatctaaacatatat 81
||||||||||| ||||||||
Sbjct: 62 ctaatgaatctagacatatat 82
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| |||||||| | |||||||||| ||| ||| |||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 64 atgaatcta 72
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 26 aagtcattctagcattttccatatttatattgatgttaatgaatc 70
||||||||||||||||| ||| ||| ||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 29 tcattctagcattttccatatttatattgatgttaatgaatc 70
|||||||||||||| ||| ||| ||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||||||||||||||| | | |||| | |||||||||| ||| ||| |||| |||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 64 atgaatcta 72
|||||||||
Sbjct: 99 atgaatcta 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||| | | |||| | |||||||||| ||| ||| |||| |||||
Sbjct: 3 tatactccctccgtttcatattataagactttctagcattacccacattcatatagatgt 62
Query: 62 taa 64
|||
Sbjct: 63 taa 65
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1 atatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatg 60
||||||| ||||||||||| | | |||| | |||||||||| ||| ||| |||| ||||
Sbjct: 129 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 70
Query: 61 ttaatgaatctaaacat 77
|||||||||||| ||||
Sbjct: 69 ttaatgaatctagacat 53
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgt 61
|||||||||||||||||| ||||||| | || ||||||| ||| ||| |||| |||||
Sbjct: 144 tatactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgt 85
Query: 62 taatgaat 69
||||||||
Sbjct: 84 taatgaat 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcatt 41
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtta 63
|||| ||||||||||| | | |||| | |||||||||| ||| ||| |||| |||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 64 atgaatctaaacatatatat 83
||||||||| ||||||||||
Sbjct: 98 atgaatctagacatatatat 79
Score = 50.1 bits (25), Expect = 1e-05
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 3 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgtt 62
||||||||||||||||| | | |||| | |||||||||| ||| | | |||| ||||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtt 63
Query: 63 aatgaatctaaacatatatat 83
|||||| ||| ||| ||||||
Sbjct: 64 aatgaacctatacacatatat 84
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 tactccctccgtttcacaatgtaagtcattctagca 39
||||||||||||||||||||||||| | ||||||||
Sbjct: 98 tactccctccgtttcacaatgtaagactttctagca 63
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 76/91 (83%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 32 ttctagcattttccatatttatattgatgttaatgaatctaaacatatatatttatccta 91
|||||||||| ||| ||| |||| |||||||||||||||| || |||||| ||| |||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatat-cta 48
Query: 92 gatccattaatattaatatgactgtgggcaa 122
||| |||||| || |||||| |||||||||
Sbjct: 47 gattcattaacatatatatgaatgtgggcaa 17
Score = 46.1 bits (23), Expect = 1e-04
Identities = 75/91 (82%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 32 ttctagcattttccatatttatattgatgttaatgaatctaaacatatatatttatccta 91
|||||||||| ||| ||| |||| ||||||||||||||| | |||||||| | ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgt-gccta 67
Query: 92 gatccattaatattaatatgactgtgggcaa 122
||| |||||| || |||||| |||||||||
Sbjct: 68 gattcattaacatctatatgaatgtgggcaa 98
