miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 109/123 (88%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
||||||||| |||||| ||||||||| || || |||| |||||||||||||| || |||
Sbjct: 74 tacatatatatttatctagattcattaaca-tcaatat-gaatgtgggaaatgctagaat 131
Query: 123 gac 125
|||
Sbjct: 132 gac 134
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 90
Query: 63 ga 64
||
Sbjct: 89 ga 88
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 122/140 (87%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| |||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|||||||||| ||||| ||||||||| || | |||| |||||||||||||| ||||||
Sbjct: 74 gacatatatatctatctagattcattaaca-ttaatat-gaatgtgggaaatgctaaaat 131
Query: 123 gacgttatattatgagacgg 142
||| ||||||| ||| ||||
Sbjct: 132 gac-ttatattgtgaaacgg 150
Score = 69.9 bits (35), Expect = 9e-12
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| |||||| ||||| ||| ||||| ||| |||||||||||
Sbjct: 149 cgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 89 gatagatatatatgtctagattcatta 63
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| | |||| ||||| ||||||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 74 gacatatatatctatctagattcatta 100
Score = 77.8 bits (39), Expect = 4e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 7 tcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctagaca 66
|||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagata 86
Query: 67 tatatagttatctggattcatta 89
||||| | ||| |||||||||
Sbjct: 85 gatatatatgtctagattcatta 63
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| |||||||||| || |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||| | |||||||||
Sbjct: 74 gacatatatatctatttagattcatta 100
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| |||||| |||||||||||||||| | || ||| |||||||| |||||||||||
Sbjct: 149 cgttccacaatataagtcattctagcatttttcacattcatattgatattaatgaatcta 90
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 109 bits (55), Expect = 1e-23
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||| ||||| |||||||||||
Sbjct: 153 cgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatcta 94
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 93 gacatatatatctatctagattcatta 67
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 90
Query: 63 gacatatata 72
||||||||||
Sbjct: 89 gacatatata 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||| ||||||
Sbjct: 14 cgtttcacaatgtaagtcattatagcat 41
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 73
Query: 63 gacatatata 72
||||||||||
Sbjct: 74 gacatatata 83
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 131 cgtttcacaatgtaagtcattctagcat 104
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatcta 73
Query: 63 gacatatata 72
||||||||||
Sbjct: 74 gacatatata 83
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||
Sbjct: 139 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 83
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 90/101 (89%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| | ||| ||| |||| |||| ||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatgga 103
|||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 74 gacatatatatttatctagattcattagca-tcgatatgga 113
Score = 56.0 bits (28), Expect = 1e-07
Identities = 115/140 (82%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||||||| || | || || |||| |||| |||||||||||
Sbjct: 149 cgtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatcta 90
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|| | ||||| | ||| |||||||| ||| ||||||| |||||||| ||||| || |||
Sbjct: 89 gataaatatatatgtctagattcattggca-tcgatat-gaatgtggaaaatgctagaat 32
Query: 123 gacgttatattatgagacgg 142
||| ||| ||||||| ||||
Sbjct: 31 gac-ttacattatgaaacgg 13
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 103 bits (52), Expect = 6e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 73
Query: 63 gacatata 70
||||||||
Sbjct: 74 gacatata 81
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 6e-22
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| | ||| ||| ||||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatcta 90
Query: 63 gacatatatagttatctggattcattag 90
|||||||||| ||||| ||||||||||
Sbjct: 89 gacatatatatctatctagattcattag 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 104/123 (84%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| || || ||| |||||||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|| | ||||| | ||| |||||||||||| || |||| |||||||| ||||| || |||
Sbjct: 74 gatagatatatatgtctagattcattagca-tcaatat-gaatgtggtaaatgttagaat 131
Query: 123 gac 125
|||
Sbjct: 132 gac 134
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| ||||| ||| |||||||| |||||||||||
Sbjct: 149 cgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|| ||||||| |||||| |||||||||
Sbjct: 89 gatatatatatttatctagattcatta 63
Score = 63.9 bits (32), Expect = 5e-10
Identities = 116/140 (82%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||| | | | ||| ||| ||||| ||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattctaactttttccacattcatattaatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|| | ||||| ||||| ||||||||| | || |||| |||||||||||||| || |||
Sbjct: 74 gataaatatatatatctagattcattaata-tcaatat-gaatgtgggaaatgctagaat 131
Query: 123 gacgttatattatgagacgg 142
||| ||||||| ||| ||||
Sbjct: 132 gac-ttatattgtgaaacgg 150
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| ||||| ||| |||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 74 gacatatatatctatctagattcatta 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcat 122
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 107/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| ||| || ||||| ||| |||||||||||||||||||||
Sbjct: 149 cgtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatcta 90
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|| ||||||| ||||| ||||||||| | ||| |||| |||||||||||||| || |||
Sbjct: 89 gaaatatatatctatctagattcattaac-gtcaatat-gaatgtgggaaatgctagaat 32
Query: 123 gac 125
|||
Sbjct: 31 gac 29
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||| | |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 74 gatagatatatatttctagattcatta 100
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||| | ||| ||||| ||| |||||||||||||||||||||
Sbjct: 149 cgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 89 gacatatatatctatctagattcatta 63
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| |||||| || |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|| | ||||| | ||| ||||||||| || || |||| |||||||||||||||| |||
Sbjct: 74 gatagatatatatgtctagattcattacca-tcaatat-gaatgtgggaaatggtggaat 131
Query: 123 gacgttatattatgagacgg 142
||| ||| ||||||| ||||
Sbjct: 132 gac-ttacattatgaaacgg 150
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| ||||| ||| |||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 74 gacatatatatctatctagattcatta 100
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||||||| || | || ||| |||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 89 gatagatatatatgtctagattcatta 63
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 107/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| || ||||| ||| ||||||||| |||||||| ||
Sbjct: 149 cgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatgaatgta 90
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|||||||||| ||||| ||||||||| || || |||| |||||||||||||| || |||
Sbjct: 89 gacatatatatctatctagattcattaaca-tcaatat-gaatgtgggaaatgctagaat 32
Query: 123 gac 125
|||
Sbjct: 31 gac 29
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||| ||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||| | |||||||||
Sbjct: 74 gacatatatatctatttagattcatta 100
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| | ||| ||| |||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaatcta 90
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 107/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||| ||| ||||| ||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatcta 90
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|||||||||| ||||| ||||||||| || | |||| |||||||||||||| ||||||
Sbjct: 89 gacatatatatctatctagattcattaacact-aatat-gaatgtgggaaatgctaaaat 32
Query: 123 gac 125
|||
Sbjct: 31 gac 29
Score = 69.9 bits (35), Expect = 9e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| ||||| ||| ||||| || |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 74 gatagatatatatgtctagattcatta 100
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||||||| || ||||| ||| |||||| || |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 89 gacatatatatctatctagattcatta 63
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| || ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 74 gatagatatatatgtctagattcatta 100
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||| ||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatcta 73
Query: 63 gacatatata 72
||||||||||
Sbjct: 74 gacatatata 83
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | || ||||||||||||| |||| ||||||
Sbjct: 147 cgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatcta 90
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||| ||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 147 cgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatcta 88
Query: 63 gacatatata 72
||||||||||
Sbjct: 87 gacatatata 78
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | || ||||||||||||| |||| ||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaatcta 71
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| ||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 147 cgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 88
Query: 63 gacatatata 72
||||||||||
Sbjct: 87 gacatatata 78
Score = 79.8 bits (40), Expect = 9e-15
Identities = 105/123 (85%), Gaps = 4/123 (3%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| ||||||||||||||||||||||| | | | ||| ||||||||| |||||||| ||
Sbjct: 14 cgttccacaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|||||||||| | ||| ||||||||| || || |||| |||||||||||||| || |||
Sbjct: 74 gacatatata--tgtctagattcattaaca-tcaatat-gaatgtgggaaatgctagaat 129
Query: 123 gac 125
|||
Sbjct: 130 gac 132
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 73
Query: 63 gacat 67
|||||
Sbjct: 74 gacat 78
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 140 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 81
Query: 63 ga 64
||
Sbjct: 80 ga 79
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 130 cgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 71
Query: 63 gaca 66
||||
Sbjct: 70 gaca 67
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
||||||| |||||||||||||||||||| |||||
Sbjct: 14 cgtttcataatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| || || ||||||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaatgaatcta 73
Query: 63 gacatata 70
||||||||
Sbjct: 74 gacatata 81
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||| ||||||||| |||||| | ||| ||| |||||||||
Sbjct: 130 cgtttcacaatataagtcattttagcattttccacattcatattgatg 83
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 73
Query: 63 gaca 66
||||
Sbjct: 74 gaca 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
||||||| |||||||||||||||||||| |||||
Sbjct: 130 cgtttcataatgtaagtcattctagcatttccca 97
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/140 (85%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||| ||||||||||| | || ||||||||||||| |||||||||||
Sbjct: 149 cgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaatcta 90
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|||||||||| ||||| ||||||||| || | |||| |||||||||||||| || |||
Sbjct: 89 gacatatatatctatctagattcattaaca-taaatat-gaatgtgggaaatgctacaat 32
Query: 123 gacgttatattatgagacgg 142
||| ||||||| ||| ||||
Sbjct: 31 gac-ttatattgtgaaacgg 13
Score = 69.9 bits (35), Expect = 9e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| |||||| ||||| ||| ||||| ||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 74 gatagatatatatgtctagattcatta 100
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 148 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 89
Query: 63 gacatat 69
||||||
Sbjct: 88 aacatat 82
Score = 89.7 bits (45), Expect = 9e-18
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 73
Query: 63 g 63
|
Sbjct: 74 g 74
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatct 61
|||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatct 72
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaat 55
|||||||||| ||||||||||||||||| ||||| ||| ||||||||| ||||
Sbjct: 128 cgtttcacaaagtaagtcattctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| |||||||| || ||||| ||| |||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 89 gacatatatatctatctagattcatta 63
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctag 27
|||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 93.7 bits (47), Expect = 6e-19
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| || | ||| ||| ||||||||| |||||||||||
Sbjct: 148 cgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatcta 89
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 88 gacatatatatctatctagattcatta 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||| ||||||||||| ||||||| | ||||| ||| |||||||| |||||||||||
Sbjct: 14 cgttttacaatgtaagttattctagttt-tcccacattcatattgatattaatgaatcta 72
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 73 gatagatatatatgtctagattcatta 99
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 106/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | | | ||| || ||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaatcta 90
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|||||||||| ||||| ||||||||| || || |||| ||||||| ||||||||| |||
Sbjct: 89 gacatatatatctatctagattcattaaca-tcaatat-gaatgtgagaaatggtagaat 32
Query: 123 gac 125
|||
Sbjct: 31 gac 29
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| || || ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|| | ||||| | ||| |||||||||
Sbjct: 74 gatagatatatatgtctagattcatta 100
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 106/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| |||| |||| | |||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatcta 90
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
| |||||||| | ||| ||||||||| || || |||| ||||||| |||||| ||||||
Sbjct: 89 aatatatatagatgtctagattcattaaca-tctatat-gaatgtgagaaatgataaaat 32
Query: 123 gac 125
|||
Sbjct: 31 gac 29
Score = 61.9 bits (31), Expect = 2e-09
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||| ||||||||||| || ||| || || ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
||||| |||| ||| | ||||||| | || || |||| |||||||||||||| || |||
Sbjct: 74 gacatctatatatatttagattcatcaaca-tctatat-gaatgtgggaaatgctagaat 131
Query: 123 gac 125
|||
Sbjct: 132 gac 134
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatcta 73
Query: 63 gacatat 69
|| ||||
Sbjct: 74 gatatat 80
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| ||| | ||| ||||||||| |||||||||||
Sbjct: 143 cgtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatcta 84
Query: 63 gacatatat 71
|||||||||
Sbjct: 83 gacatatat 75
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 106/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||| |||||||||| | |||| ||||| ||||||||||||| | |||||||||
Sbjct: 14 cgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
||||||||| ||||| ||||||||| || || |||| ||||||||||||| ||||||
Sbjct: 74 gacatatatttctatctagattcattaaca-tcaatat-aaatgtgggaaatgctaaaat 131
Query: 123 gac 125
|||
Sbjct: 132 gac 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||| |||||||||| |||||| ||||| ||||||||||||| |||||||||||
Sbjct: 149 cgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatgaatcta 90
Query: 63 ga 64
||
Sbjct: 89 ga 88
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| | ||| ||| |||| |||| ||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagca 92
|||||||||| ||||| ||||||||||||
Sbjct: 74 gacatatatatctatctagattcattagca 103
Score = 50.1 bits (25), Expect = 8e-06
Identities = 85/101 (84%), Gaps = 3/101 (2%)
Strand = Plus / Minus
Query: 42 atattgatggtaatgaatctagacatatatagttatctggattcattagcagtcgatatg 101
||||||||| ||||||||||||| | ||||| | ||| |||||||| ||| |||||||
Sbjct: 110 atattgatgctaatgaatctagatagatatatatgtctagattcattggca-tcgatat- 53
Query: 102 gaatgtgggaaatggtaaaatgacgttatattatgagacgg 142
|||||||| ||||| || |||||| ||| ||||||| ||||
Sbjct: 52 gaatgtggaaaatgctagaatgac-ttacattatgaaacgg 13
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 16 aagtcattctagcatgtcccagatttatattgatggtaatgaatctagacatatatagtt 75
||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 76 atctggattcatta 89
|||| |||||||||
Sbjct: 50 atctagattcatta 37
Score = 67.9 bits (34), Expect = 3e-11
Identities = 93/110 (84%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 16 aagtcattctagcatgtcccagatttatattgatggtaatgaatctagacatatatagtt 75
||||||||||||||| || || ||| ||||||||| ||||||||||||| | ||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 76 atctggattcattagcagtcgatatggaatgtgggaaatggtaaaatgac 125
||| ||||||||| || || |||| |||||||||||||| || ||||||
Sbjct: 61 gtctagattcattaaca-tcaatat-gaatgtgggaaatgctagaatgac 108
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| || || ||| ||||| ||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatcta 90
Query: 63 gacatatata 72
||||||||||
Sbjct: 89 gacatatata 80
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaatgaatcta 73
Query: 63 g 63
|
Sbjct: 74 g 74
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 90
Query: 63 gacatatata 72
||| ||||||
Sbjct: 89 gacttatata 80
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||| ||||||||||||| ||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaatgaatcta 73
Query: 63 gacatatata 72
| ||||||||
Sbjct: 74 ggcatatata 83
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 147 cgtttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatctg 88
Query: 63 gacatat 69
|||||||
Sbjct: 87 gacatat 81
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| || || ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaatcta 73
Query: 63 gacatatata 72
||||||||||
Sbjct: 74 gacatatata 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
||||| |||||||||||||||||||||| |||||
Sbjct: 136 cgttttacaatgtaagtcattctagcatttccca 103
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 131 cgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 72
Query: 63 ga 64
||
Sbjct: 71 ga 70
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||| || |||||||||||
Sbjct: 126 cgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatcta 67
Query: 63 gacatatata 72
||||||||||
Sbjct: 66 gacatatata 57
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 5 tttcacaatgtaagtcattctagcatgtcccagatttatatt 46
|||||||||||||||||||||||||| ||||| ||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 91.7 bits (46), Expect = 2e-18
Identities = 96/110 (87%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 16 aagtcattctagcatgtcccagatttatattgatggtaatgaatctagacatatatagtt 75
||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 76 atctggattcattagcagtcgatatggaatgtgggaaatggtaaaatgac 125
|| | ||||||||| || || |||| |||||||||||||| || ||||||
Sbjct: 61 atttagattcattaaca-tcaatat-gaatgtgggaaatgctagaatgac 108
Score = 67.9 bits (34), Expect = 3e-11
Identities = 93/110 (84%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 16 aagtcattctagcatgtcccagatttatattgatggtaatgaatctagacatatatagtt 75
||||||||||||||| ||||| ||| ||||||||| ||||||||||| | | ||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 76 atctggattcattagcagtcgatatggaatgtgggaaatggtaaaatgac 125
||| ||||||||| || || |||| |||||||||||||| || ||||||
Sbjct: 50 gtctagattcattaaca-tcaatat-gaatgtgggaaatgctagaatgac 3
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| ||||| ||| ||||||||| ||||| |||||
Sbjct: 120 cgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatcta 61
Query: 63 gacatatat 71
|||||||||
Sbjct: 60 gacatatat 52
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 89.7 bits (45), Expect = 9e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||| ||||
Sbjct: 136 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactag 77
Query: 64 acata 68
|||||
Sbjct: 76 acata 72
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| | ||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| || || ||| ||||||||| ||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatcta 90
Query: 63 gacatatat 71
|||||||||
Sbjct: 89 gacatatat 81
Score = 61.9 bits (31), Expect = 2e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattga 48
|||||||||||||||||||||||||||| || || ||| |||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatntctcacattcatattga 59
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| ||||| ||||||||| ||| |||||||||||
Sbjct: 148 cgtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatcta 89
Query: 63 gacatatat 71
|| ||||||
Sbjct: 88 gatatatat 80
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||| ||||||||||||||||||||| || || ||| |||||||||||||||||||||
Sbjct: 14 cgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| |||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 140 cgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatcta 81
Query: 63 gacatatat 71
|||||||||
Sbjct: 80 gacatatat 72
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 9e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| |||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||
Sbjct: 14 cgttccacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatcta 73
Query: 63 gacat 67
|||||
Sbjct: 74 gacat 78
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||| ||||||||||| ||||| ||| |||||||||
Sbjct: 123 cgtttcacaatgtaagacattctagcatttcccacattcatattgatg 76
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatcta 73
Query: 63 gaca 66
||||
Sbjct: 74 gaca 77
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||| |||||||||||||||||||| ||||| ||| |||||||||
Sbjct: 126 cgtttcataatgtaagtcattctagcatttcccacattcatattgatg 79
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||||||
Sbjct: 136 cgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatcta 77
Query: 63 gac 65
|||
Sbjct: 76 gac 74
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| || || ||||||||||||| |||| ||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaatcta 73
Query: 63 g 63
|
Sbjct: 74 g 74
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 105/123 (85%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||| | || |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
||| ||||| | ||| |||||||||||| || |||||| ||||| |||||| ||||||
Sbjct: 74 gacggatatatatgtctagattcattagca-tcaatatgg-atgtgagaaatgctaaaat 131
Query: 123 gac 125
|||
Sbjct: 132 gac 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| || || || ||||||||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatcta 90
Query: 63 gacatatata 72
||||||||||
Sbjct: 89 gacatatata 80
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| | | | ||| ||||||||| |||||||||||
Sbjct: 149 cgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| || ||||||
Sbjct: 89 gacatatatatctatctagagtcatta 63
Score = 75.8 bits (38), Expect = 1e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| |||||||| |||||| ||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactcta 73
Query: 63 gacatatatagttatctggattcattagca 92
|| | ||||| | ||| ||||||||||||
Sbjct: 74 gatagatatatatgtctagattcattagca 103
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| |||| | || |||||||||||
Sbjct: 149 cgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
||||| |||| ||||| |||||||||
Sbjct: 89 gacatctatatatatctagattcatta 63
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 11 aatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctagacatata 70
|||||||||||||||| ||| ||||| ||| |||| | || ||||||||||||| |||||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatata 81
Query: 71 tagttatctggattcatta 89
||| | ||| |||||||||
Sbjct: 82 tagatgtctagattcatta 100
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 73
Query: 63 gacatat 69
||||||
Sbjct: 74 aacatat 80
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 134 cgtttcacaatgtaagtcattctagcat 107
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 85.7 bits (43), Expect = 1e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 120 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||| | ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatcta 73
Query: 63 gacatatatag 73
|| | ||||||
Sbjct: 74 gatagatatag 84
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | || ||| ||||||||| |||||||| ||
Sbjct: 149 cgtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaatata 90
Query: 63 gacatatatagttatctggattcatta 89
||||| |||| ||||| |||||||||
Sbjct: 89 gacatctatatctatctagattcatta 63
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 131 cgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaatcta 72
Query: 63 gacatat 69
||||||
Sbjct: 71 tacatat 65
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaat 55
|||||||||||||||||||||||||||| ||||| ||| ||||| ||| ||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatc 60
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatc 71
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatc 60
||||||||||||||| |||||||||||| || || ||| ||||||||| |||||||||
Sbjct: 132 cgtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| || || ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||
Sbjct: 137 cgtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaatcta 78
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatc 60
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatc 60
||||||| |||||||||||||||||||| ||||| ||| ||||||||| |||||||||
Sbjct: 129 cgtttcataatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 72
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| || || ||||||||||||| |||| ||||||
Sbjct: 136 cgtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaatcta 77
Query: 63 ga 64
||
Sbjct: 76 ga 75
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||||||||||||| |||||| ||||| ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| || || ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| | ||| |||||||||||| |||||||||||
Sbjct: 137 cgtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaatcta 78
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| ||||| ||| ||||||||| |||||||||||
Sbjct: 127 cgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatcta 68
Query: 63 ga 64
||
Sbjct: 67 ga 66
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatcta 73
Query: 63 g 63
|
Sbjct: 74 g 74
Score = 54.0 bits (27), Expect = 5e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcat-tctagcatgtcccagatttatattgatggtaatg 56
|||||||||||||||||||| | |||||| ||||| ||| ||||||||| |||||
Sbjct: 134 cgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 80
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| |||||| | ||| ||||||||||||| |||||||||||
Sbjct: 143 cgtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatcta 84
Query: 63 gacatatat 71
|| ||||||
Sbjct: 83 gagatatat 75
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| || || ||||| ||||||| |||||||| ||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaatgaattta 73
Query: 63 gacatat 69
|| ||||
Sbjct: 74 gatatat 80
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 134 cgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatcta 75
Query: 63 g 63
|
Sbjct: 74 g 74
Score = 54.0 bits (27), Expect = 5e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcat-tctagcatgtcccagatttatattgatggtaatg 56
|||||||||||||||||||| | |||||| ||||| ||| ||||||||| |||||
Sbjct: 14 cgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgctaatg 68
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||| | |||||||||||
Sbjct: 121 cgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatcta 62
Query: 63 gacatatat 71
|||||||||
Sbjct: 61 gacatatat 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||| ||||||||||
Sbjct: 14 cgtttcacaatgtaagttattctagcat 41
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 123 cgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatcta 64
Query: 63 gacat 67
||||
Sbjct: 63 aacat 59
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| | ||| ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| ||||| ||| ||||||||| ||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatcta 73
Query: 63 gacat 67
|||||
Sbjct: 74 gacat 78
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| ||||| ||| ||||||||| ||||||||||
Sbjct: 143 cgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatcta 84
Query: 63 gaca 66
||||
Sbjct: 83 gaca 80
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 9e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| || || ||| ||||| ||| ||||||||||
Sbjct: 129 cgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatcta 70
Query: 63 gacatata 70
||||||||
Sbjct: 69 gacatata 62
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| || || ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatat 45
|||||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 115 cgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| ||||| ||| ||||||||| | || ||||||
Sbjct: 135 cgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatcta 76
Query: 63 gaca 66
||||
Sbjct: 75 gaca 72
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||| ||||||||||| ||||| ||| ||||||||| | ||||||
Sbjct: 14 cgtttcacaatgtaagccattctagcatttcccacattcatattgatgttcatgaat 70
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaa 58
||||||||||||||||||||||||| || ||||| ||||||||||||| |||||||
Sbjct: 142 cgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatgaa 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaa 58
||||||||||| |||||||||||| || ||||| ||| ||||||||| |||||||
Sbjct: 14 cgtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| | ||| ||| ||||||||| |||||||||||
Sbjct: 131 cgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaatcta 72
Query: 63 gacatat 69
||||||
Sbjct: 71 tacatat 65
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaat 55
|||||||||||||||||||||||||||| ||||| ||| ||||| ||| ||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||||||| || ||||| ||| ||||||||| |||||||||||
Sbjct: 127 cgtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaatcta 68
Query: 63 gac 65
|||
Sbjct: 67 gac 65
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||||||||| ||||||| || || || ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacatttatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
||||||||||| |||||||||||||||| ||||| ||| ||||||||
Sbjct: 127 cgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| ||||| ||| |||||||| |||||||||||
Sbjct: 106 cgtttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatcta 47
Query: 63 gacatat 69
|| ||||
Sbjct: 46 gatatat 40
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| ||| | ||| ||||||||| |||||||||||
Sbjct: 114 cgtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaatcta 55
Query: 63 ga 64
||
Sbjct: 54 ga 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| |||| |||| |||||||| ||
Sbjct: 149 cgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaattta 90
Query: 63 gacatatata 72
|||||||||
Sbjct: 89 aacatatata 80
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| | | | ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaatcta 73
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| ||||| ||| ||||| ||| |||||||||||
Sbjct: 123 cgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatcta 64
Query: 63 ga 64
||
Sbjct: 63 ga 62
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| ||||| ||| || | |||| ||||||||| |
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaa 73
Query: 63 gacatatata 72
||||||||||
Sbjct: 74 gacatatata 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 101/123 (82%), Gaps = 4/123 (3%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||| |||||||| |||||| | || ||| |||| |||| |||||||||||
Sbjct: 147 cgtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaatcta 88
Query: 63 gacatatatagttatctggattcattagcagtcgatatggaatgtgggaaatggtaaaat 122
|||||||| | ||| ||||||||| || || | || |||||||||||||| ||||||
Sbjct: 87 tgcatatata--tgtcttgattcattaaca-tctacat-gaatgtgggaaatgctaaaat 32
Query: 123 gac 125
|||
Sbjct: 31 gac 29
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| ||||| ||| |||| || | || ||||||||
Sbjct: 149 cgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatcta 90
Query: 63 gacatatata 72
||||||||||
Sbjct: 89 gacatatata 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||| ||||||||||||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcat 41
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| |||||| |||||||||||| ||| || || ||| ||||||||| |||||||||||
Sbjct: 149 cgttccacaatataagtcattctaacatttctcatattcatattgatgctaatgaatcta 90
Query: 63 gacatatatagttatctggattcattagca 92
||||||||| ||||| |||||||||||
Sbjct: 89 aacatatatatctatctaaattcattagca 60
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 15 taagtcattctagcatgtcccagatttatattgatggtaatgaatctaga 64
||||||||||||| || | ||| ||| ||||||||| |||||||| ||||
Sbjct: 26 taagtcattctagtattttccatattcatattgatgctaatgaatttaga 75
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| ||| ||||||||| ||||| |||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| ||||||||||||||||||||||| ||||| ||| ||||||||| ||||| |||||
Sbjct: 137 cgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgtatcta 78
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| |||||| | || ||| ||||||||| |||||||||||
Sbjct: 123 cgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatcta 64
Query: 63 gacatatata 72
||||||||||
Sbjct: 63 gacatatata 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcatgtccc 35
||||||||||||||||||||||||||| ||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttccc 46
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| ||||| ||| ||||| ||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 123 cgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||||||| || | || ||||||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||| |||||||||||| | | | ||| ||||||||| |||||||| ||
Sbjct: 137 cgtttcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaattta 78
Query: 63 ga 64
||
Sbjct: 77 ga 76
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||||||| || || || ||||||||||||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattctagtatttctcatatttatattgatgataatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||| ||| ||||| ||| ||||||||| |||||||||||
Sbjct: 126 cgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatcta 67
Query: 63 ga 64
||
Sbjct: 66 ga 65
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||| |||||||||||||||| | ||| ||| |||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcattttccacattcatattgatg 61
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatc 60
||||||||||||||||||||| |||||| ||||| ||| ||||||||| |||||||||
Sbjct: 125 cgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatc 68
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||||||||||||| | |||| | ||| ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattttggcattttccacattcatattgatg 61
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||| |||||||| |||||| ||||| ||| ||||||||| |||| ||||||
Sbjct: 127 cgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatcta 68
Query: 63 gacatatata 72
||||| ||||
Sbjct: 67 gacatttata 58
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
||||||||||||||||| ||||||| || |||||
Sbjct: 14 cgtttcacaatgtaagttattctagtatttccca 47
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | | | ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| || || ||| |||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| ||||| ||| |||||||||
Sbjct: 133 cgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 86
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| || || ||| ||||||||| |||||||||||
Sbjct: 118 cgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaatcta 59
Query: 63 ga 64
||
Sbjct: 58 ga 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 15 taagtcattctagcatgtcccagatttatattgatggtaatgaatctagacatatat 71
|||||||||||||||| || || ||| ||||||||| ||||||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 11 aatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||||||| || || ||| ||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||||||||||||||| ||| | ||| ||||||||| ||||||||
Sbjct: 105 cgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaat 49
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
|||||||||||||||||||||||||||| |||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||||||||||||||| | ||| ||| ||||||||| ||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||| |||||||||||||||||||| | ||| ||| |||||||||
Sbjct: 120 cgtttcataatgtaagtcattctagcattttccatattcatattgatg 73
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||||||| || || || ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaatgaatcta 73
Query: 63 gacatatat 71
|||| ||||
Sbjct: 74 gacaaatat 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 tttcacaatgtaagtcattctagcat 30
||||| ||||||||||||||||||||
Sbjct: 119 tttcataatgtaagtcattctagcat 94
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||| ||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatcta 73
Query: 63 gacatata 70
||||||||
Sbjct: 74 gacatata 81
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 75/87 (86%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||||| |||| ||||| ||| ||| | ||| |||||||| ||
Sbjct: 14 cgtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaattta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| ||||| |||||||||
Sbjct: 74 gacatatata--tatctagattcatta 98
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | || ||| ||| | ||| |||||||||||
Sbjct: 147 cgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatcta 88
Query: 63 gacatatata 72
|| |||||||
Sbjct: 87 gatatatata 78
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| | ||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaa 58
||||||||||||||||||||||||||| || || ||| ||||||||| |||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaa 85
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 5 tttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctaga 64
||||| |||||||||||||||||||| | || ||| |||| |||| |||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 65 catatata 72
||||||||
Sbjct: 61 catatata 54
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||| ||||||||||||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatcta 90
Query: 63 gaca 66
||||
Sbjct: 89 gaca 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| |||| || |||| |||| |||||||| ||
Sbjct: 14 cgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaattta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||| |||||||||| | ||| | ||||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | ||| | ||||||||||| |||| ||||||
Sbjct: 130 cgtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaatcta 71
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tttcacaatgtaagtcattctagcat 30
||||||||||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattttagcat 41
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||||||| || ||||| ||| |||||||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatcta 73
Query: 63 gacatatatagt 74
|| | |||||||
Sbjct: 74 gatagatatagt 85
Score = 54.0 bits (27), Expect = 5e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||| | ||| ||||| ||| ||||||||| |||| |||||
Sbjct: 146 cgtttcataatgtaagtcattccaccatttcccacattcatattgatgccaatggatcta 87
Query: 63 gac 65
|||
Sbjct: 86 gac 84
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaa 58
||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||||
Sbjct: 112 cgtttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatatt 46
||||||||||||||||||||| |||||| ||||| ||| |||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaa 58
|||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||||||
Sbjct: 14 cgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| ||| || || || ||| ||||||||| |||||||||||
Sbjct: 138 cgtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatcta 79
Query: 63 gaca 66
||||
Sbjct: 78 gaca 75
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaat 55
|||||||||||||||||||| ||| || | || ||||||||||||| ||||
Sbjct: 15 gtttcacaatgtaagtcattttagtatttgtcacatttatattgatgttaat 66
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||| |||||||||||| ||| | ||| ||| ||||||||| |||||||||||
Sbjct: 130 cgtttcataatataagtcattctaacattttccacattcatattgatgttaatgaatcta 71
Query: 63 gacatata 70
||||||||
Sbjct: 70 gacatata 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||| ||||||||||||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 128 cgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 54.0 bits (27), Expect = 5e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcat-tctagcatgtcccagatttatattgatggtaatgaatct 61
|||||||||||||||||| |||| ||| ||||| ||| ||||||||| ||||||||||
Sbjct: 14 cgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgttaatgaatct 73
Query: 62 aga 64
|||
Sbjct: 74 aga 76
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatct 61
||||||||||| |||||||||||||||| || || ||| ||||||||| ||||||||||
Sbjct: 126 cgtttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaatct 68
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatga 57
||||||| ||||||||||||||||||| || || ||| ||||||||| ||||||
Sbjct: 15 gtttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||| |||||| |||| ||| |||| ||||||||||||||||
Sbjct: 149 cgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaatcta 90
Query: 63 gacatat 69
||||||
Sbjct: 89 aacatat 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||| | |||| || |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacatttatattgat 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
||||||||||| |||||||||||||||| ||||| ||| ||||||||
Sbjct: 127 cgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| || | ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||| | | ||||| |||||||||
Sbjct: 74 gacatagacatatatctagattcatta 100
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||||||||| | || ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatcta 90
Query: 63 gacatat 69
|| ||||
Sbjct: 89 gatatat 83
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatat 45
|||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatat 45
|||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 97 cgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttata 44
|||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 140 cgtttcacaatgtaagtcattctagcatttcccacatttata 99
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatga 57
|||||||||||||||||||||||||||| ||||| ||| |||| |||| ||||||
Sbjct: 121 cgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| ||||| ||| |||| ||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 61
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||| |||||| || |||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||||||||| | ||| |||||||||
Sbjct: 74 gacatatatatgtgtctagattcatta 100
Score = 54.0 bits (27), Expect = 5e-07
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| | || ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|||| ||||| | ||| |||||||||
Sbjct: 89 gacacatatatatgtctagattcatta 63
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||| |||||||||| | || ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||| ||||| |||||| | | | ||||||||||||| |||||||| ||
Sbjct: 137 cgtttcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaattta 78
Query: 63 ga 64
||
Sbjct: 77 ga 76
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| | ||| ||| ||||||||| |||||||| ||
Sbjct: 14 cgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatgta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattga 48
|||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||| ||||||||||||||||
Sbjct: 95 cgtttcacaatataagtcattctagcat 68
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||| || ||| ||||| ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| |||||| |||||||||||||||| | | | ||| ||||||||| |||||||||||
Sbjct: 137 cgttccacaatataagtcattctagcatttactatattcatattgatgttaatgaatcta 78
Query: 63 ga 64
||
Sbjct: 77 ga 76
Score = 50.1 bits (25), Expect = 8e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 102 gaatgtgggaaatggtaaaatgacgttatattatgagacgg 142
|||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 52 gaatgtgggaaatggtaaaatgac-ttacattatgaaacgg 13
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||| || ||| ||||| ||| ||||||||| |||||||||||
Sbjct: 137 cgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatcta 78
Query: 63 ga 64
||
Sbjct: 77 ga 76
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||| |||||| |||||||||||||||| | | | ||| ||||||||| |||||||||||
Sbjct: 14 cgttccacaatataagtcattctagcatttactatattcatattgatgttaatgaatcta 73
Query: 63 ga 64
||
Sbjct: 74 ga 75
Score = 50.1 bits (25), Expect = 8e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 102 gaatgtgggaaatggtaaaatgacgttatattatgagacgg 142
|||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 99 gaatgtgggaaatggtaaaatgac-ttacattatgaaacgg 138
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||||||| | || | |||||||||| |||||||||||
Sbjct: 121 cgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatgaatcta 62
Query: 63 ga 64
||
Sbjct: 61 ga 60
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatg 56
|||||||||||||||||||||||||||| || || ||||||||| ||| |||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacatttatattaatgttaatg 67
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
|||| |||||||||||||||||||||||
Sbjct: 92 cgttccacaatgtaagtcattctagcat 65
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||| ||||||||| | ||| ||| ||||| ||| |||||||||||
Sbjct: 125 cgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaatgaatcta 66
Query: 63 ga 64
||
Sbjct: 65 ga 64
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||||||||||||||| ||| | ||| |||||||| ||||||||
Sbjct: 117 cgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaat 61
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
|||||||||||||||||||||||||||| |||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||| |||||||||| |||| ||| | ||| ||| ||||||||| |||||||||||
Sbjct: 121 cgtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaatcta 62
Query: 63 gacatatat 71
|| ||||||
Sbjct: 61 gatatatat 53
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | |||||| || |||| ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatcta 90
Query: 63 gacatatat 71
|||||||||
Sbjct: 89 gacatatat 81
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | |||||| || |||| ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaatcta 90
Query: 63 gacatatat 71
|||||||||
Sbjct: 89 gacatatat 81
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
|||||| ||||||||||||||||| || ||||| ||| ||| ||||| |||| |||||||
Sbjct: 134 gtttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaatctag 75
Query: 64 acatatata 72
| |||||||
Sbjct: 74 atatatata 66
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||| ||||||||||||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||||||||||||||| || || ||| |||||| || ||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatgaat 70
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 121 cgtttcacaatgtaagtcattctagcat 94
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaat 59
|||||||||||||||||||||||||||| | || |||||||||||| ||||||||
Sbjct: 122 cgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatgaat 66
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||| ||||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcat 41
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||| |||||||||||||||| |||| ||| |||| |||| ||||||||||
Sbjct: 14 cgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatctg 73
Query: 63 gacatatat 71
|||||||||
Sbjct: 74 gacatatat 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||||||| || |||| ||| ||| ||| |||||||||||
Sbjct: 147 cgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaatcta 88
Query: 63 gacatatata 72
| || |||||
Sbjct: 87 gccacatata 78
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||||||||||||| |||||| || || |||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttctcatatttatattgatg 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||| ||||||||| |||||| || || |||||||||||||
Sbjct: 113 cgtttcacaatataagtcattttagcatttctcatatttatattgatg 66
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| | ||| ||| |||||||||
Sbjct: 143 cgtttcacaatgtaagtcattctagcattttccatattcatattgatg 96
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatga 57
|||||||||||||||||||||||||||| | ||| ||| |||| |||| ||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatga 68
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||| ||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaatcta 73
Query: 63 gaca 66
||||
Sbjct: 74 gaca 77
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| || || ||| |||||||| |||||||||||
Sbjct: 117 cgtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatcta 58
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatatt 46
||||||||||| |||||||||||||||| | ||| |||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
||||| ||||||||| |||||||||||| |||||
Sbjct: 98 cgttttacaatgtaaatcattctagcatttccca 65
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| || | ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatcta 73
Query: 63 gaca 66
||||
Sbjct: 74 gaca 77
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| |||| || ||||| |||| |||||||| ||
Sbjct: 149 cgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaattta 90
Query: 63 ga 64
||
Sbjct: 89 ga 88
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||| |||||||||||||||| ||||| ||| |||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatatt 46
||||||||||| |||||||||||||||| ||||| ||| |||||
Sbjct: 110 cgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| | ||| ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatga 57
|||||||||||||||||||||||||| | | ||| ||| ||||||||| ||||||
Sbjct: 143 cgtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatga 89
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| | ||| ||| |||||||||
Sbjct: 122 cgtttcacaatgtaagtcattctagcattttccatattcatattgatg 75
Score = 58.0 bits (29), Expect = 3e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||| |||||||||| | ||| ||| |||||||| || |||||||||
Sbjct: 14 cgtttcacaatgtaagttattctagcattttccacattcatattgat-gttatgaatcta 72
Query: 63 gacat 67
||||
Sbjct: 73 aacat 77
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
|||||||||||||||||||||||||||| || || ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||| ||||||||
Sbjct: 102 cgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| |||| ||| || | |||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaatcta 90
Query: 63 gacatat 69
|||||||
Sbjct: 89 gacatat 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 73/90 (81%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| |||| || |||| ||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagactttctagcattgcccacatacatataaatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcattagca 92
||| ||| | | ||| ||||||||||||
Sbjct: 74 aacacatacatatgtctagattcattagca 103
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| || | ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatcta 90
Query: 63 gacatatatagttatctggattcatta 89
|| ||| | | ||||| |||||||||
Sbjct: 89 gatatagacatatatctagattcatta 63
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||||||||||||| | || ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaatgaatcta 73
Query: 63 gacatat 69
|| ||||
Sbjct: 74 gatatat 80
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatct 61
||||||||||| |||||||||||||||| ||||| ||| | |||||| ||||||||||
Sbjct: 126 cgtttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatct 68
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||| ||||||||||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcat 41
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatga 57
||||||||||||||||||||| |||||| | ||| ||| ||||||||| ||||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| |||| ||| || | |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaatgaatcta 73
Query: 63 gacatat 69
|||||||
Sbjct: 74 gacatat 80
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| |||| ||| |||| |||| |||| ||||||
Sbjct: 125 cgtttcacaatgtaagactttctagcattgcccacattcatatagatgttaataaatcta 66
Query: 63 gacatat 69
|||||||
Sbjct: 65 gacatat 59
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
||||||||||| |||||||||||||||| ||||| ||| ||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tttcacaatgtaagtcattctagcatgtcccagatttatattga 48
||||||||| |||||||||||||||| ||||| ||| |||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
|||||||||||||||||||||||||||| |||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttccca 47
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||| ||||||||||||
Sbjct: 86 cgtttcacaatgtaaatcattctagcat 59
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 113 gtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatga 57
||||||| ||||||||||||| ||||| | ||| ||| ||||||||| ||||||
Sbjct: 14 cgtttcataatgtaagtcattttagcactttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 60.0 bits (30), Expect = 8e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| ||| |||||||| |||| |||||||||||
Sbjct: 128 cgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaatcta 69
Query: 63 gacata 68
||||||
Sbjct: 68 gacata 63
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttata 44
|||||||||||||||||||||||||||| ||| | |||||||
Sbjct: 80 cgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctag 27
|||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| ||| ||| || | |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagactttctagcattatccacattcatttagatgttaatgaatcta 73
Query: 63 gacatatata 72
||||||||||
Sbjct: 74 gacatatata 83
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
|||||||||||||||||||||||||||| |||||
Sbjct: 86 cgtttcacaatgtaagtcattctagcatttccca 53
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcat 30
|||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 8e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattga 48
||||||||||| |||||||||||||||| ||||| ||| |||||||
Sbjct: 105 cgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||| ||||||||||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcat 41
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| |||||| | || ||||| ||| ||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatcta 73
Query: 63 gacatatat 71
|||| ||||
Sbjct: 74 gacagatat 82
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
|||||| ||| |||||||||||||||| | ||| ||| ||| ||||| ||||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacattcatactgatgctaatgaatctag 74
Query: 64 a 64
|
Sbjct: 75 a 75
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||| ||||||||||||| |||||| ||||| ||| |||||||||
Sbjct: 129 cgtttcataatgtaagtcattgtagcatttcccacattcatattgatg 82
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||||||||||| ||| | || || ||||||||| |||||||||||
Sbjct: 122 cgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaatcta 63
Query: 63 g 63
|
Sbjct: 62 g 62
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||| ||| |||| ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaatcta 90
Query: 63 gacat 67
|||||
Sbjct: 89 gacat 85
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 16 aagtcattctagcatgtcccagatttatattgatggtaatgaatctaga 64
||||||||||||||| ||||| ||| ||||||||| ||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 49
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 16 aagtcattctagcatgtcccagatttatattgatggtaatgaatctaga 64
||||||||||||||| ||||| ||| ||||||||| ||||| |||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 75
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 16 aagtcattctagcatgtcccagatttatattgatggtaatgaatc 60
||||||||||||||| ||||| ||| ||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 19 tcattctagcatgtcccagatttatattgatggtaatgaatc 60
|||||||||||| ||||| ||| ||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatcta 90
Query: 63 gacatatat 71
|| ||||||
Sbjct: 89 gaaatatat 81
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatcta 73
Query: 63 gacatatat 71
|| ||||||
Sbjct: 74 gaaatatat 82
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 5 tttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctaga 64
||||||||||||| ||||| |||||| | || |||||||||||| |||||||||||||
Sbjct: 95 tttcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaatctaga 36
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 107 cgtttcacaatgtaagtcattctagcat 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
|||||||||||| |||||||||||||||
Sbjct: 14 cgtttcacaatgcaagtcattctagcat 41
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
|||||| |||||||| | ||||||| | |||| |||||||| ||| ||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcgttgcccacatttatatagatactaatgaatctag 74
Query: 64 acatatat 71
||||||||
Sbjct: 75 acatatat 82
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 99 cgtttcacaatgtaagtcattctagcat 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccc 35
||||||||||||||||||||| |||||| ||||
Sbjct: 14 cgtttcacaatgtaagtcattttagcatttccc 46
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcat 41
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 103 cgtttcacaatgtaagtcattctagcat 76
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||||||||||||||| || || ||| |||| |||| || ||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaatcta 73
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 56.0 bits (28), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
||||||||||||||||| |||||||||| | ||| ||| ||||||||
Sbjct: 116 cgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
||||||||||||||||| |||||||||| | ||| ||| ||||||||
Sbjct: 14 cgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||| ||||| |||||||||||||||| || || |||||||||||||
Sbjct: 84 cgttttacaatataagtcattctagcatttctcacatttatattgatg 37
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||||||||||||||||
Sbjct: 117 cgtttcacaatgtaagtcattctagcat 90
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||| ||||| |||||||||| ||||| ||| | |||||||
Sbjct: 14 cgtttcacaatataagttattctagcatttcccacattcacattgatg 61
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||||||||||||||||||||||| || || || ||| |||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||||||||||||||| || || || |||||||| |||||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatcta 73
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| ||||||||| ||| || | ||| ||| ||||||||| |||||||||||
Sbjct: 121 cgtttcacaatataagtcattttagtattttccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
||||||||||||||||| |||||||||| | ||| ||| ||||||||
Sbjct: 14 cgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
||||||||||||||||| |||||||||| | ||| ||| ||||||||
Sbjct: 116 cgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatat 45
||||||| |||||||||||||||||||| ||||| || |||||
Sbjct: 119 cgtttcataatgtaagtcattctagcatttcccacatctatat 77
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 22 ttctagcatgtcccagatttatattgatggtaatgaatctagacatatata 72
||||||||| |||| ||| |||| |||| |||||||||||||||||||||
Sbjct: 130 ttctagcattgcccacattcatatagatgctaatgaatctagacatatata 80
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagca 29
|||||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagca 40
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | || |||||| |||| ||| || | |||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaatgaatcta 90
Query: 63 gacatat 69
|||||||
Sbjct: 89 gacatat 83
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| |||| ||| | || |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||| ||||| ||| | |||||||||
Sbjct: 74 gacacatataagtatatagattcatta 100
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| ||| ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaatcta 90
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | | ||||||| | || ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaatcta 73
Query: 63 gacatatatagttatctggattcatta 89
|||| | ||| ||||| |||||||||
Sbjct: 74 gacacacatatatatctagattcatta 100
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatat 45
||||||||||| |||||||||||||||| ||||| ||| ||||
Sbjct: 14 cgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| ||||||| ||| | || ||| ||||||||| |||||||||||
Sbjct: 121 cgtttcataatgtaagccattctatcatttttcacattcatattgatgttaatgaatcta 62
Query: 63 ga 64
||
Sbjct: 61 ga 60
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||||||||| |||||||||| ||| ||| |||| |||| |||| ||||||
Sbjct: 128 cgtttcataatgtaagttattctagcattgtccacattcatatagatgttaataaatcta 69
Query: 63 gacata 68
||||||
Sbjct: 68 gacata 63
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| |||| ||| |||| ||| |||||||| ||
Sbjct: 117 cgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaattta 58
Query: 63 gacata 68
||||||
Sbjct: 57 gacata 52
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| |||||| | || | ||||||||| |||||||||||
Sbjct: 121 cgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaatgaatcta 62
Query: 63 ga 64
||
Sbjct: 61 ga 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatat 45
||||| ||||||||||||||| ||| || ||||| ||||||||
Sbjct: 14 cgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
||||||||||||||| | ||||||||| |||| ||| || | |||| |||||||||||
Sbjct: 15 gtttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaatctaa 74
Query: 64 acatat 69
||||||
Sbjct: 75 acatat 80
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
|||||| ||||||| |||||||||||| |||| || |||| |||| ||||||||||||
Sbjct: 122 gtttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaatctag 63
Query: 64 ac 65
||
Sbjct: 62 ac 61
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||| ||||||||||||||||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtccca 36
|||| ||||||||||||||||||||||| |||||
Sbjct: 14 cgttccacaatgtaagtcattctagcatttccca 47
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagc 28
||||||||||||||||||||||||||
Sbjct: 85 cgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 20 cattctagcatgtcccagatttatattgatggtaatgaatctagacatatatagttatct 79
||||||||||| | ||| ||| |||| | || |||||||||||||||| |||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 80 ggattcatta 89
|||||||||
Sbjct: 61 agattcatta 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 20 cattctagcatgtcccagatttatattgatggtaatgaatctagacatatatagttatct 79
||||||| ||| ||||| ||| |||| | || ||||||||||||| |||||||| | |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 80 ggattcatta 89
|||||||||
Sbjct: 42 agattcatta 33
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 5 tttcacaatgtaagtcattctagcatgtcccagatttatattgatg 50
||||| ||| |||||||||||||||| | ||| |||||||||||||
Sbjct: 128 tttcataatataagtcattctagcattttccatatttatattgatg 83
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||||||||||||| ||| || | ||| ||| ||||||||| |||| ||| ||
Sbjct: 14 cgtttcacaatgtaagtcattttagtattttccacattcatattgatgttaataaattta 73
Query: 63 gacata 68
|||||
Sbjct: 74 tacata 79
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 32 tcccagatttatattgatggtaatgaatctagacatatata 72
||||| ||| ||||||||| ||||||| |||||||||||||
Sbjct: 9 tcccacattcatattgatgctaatgaaactagacatatata 49
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 32 tcccagatttatattgatggtaatgaatctagacatatata 72
||||| ||| ||||||||| |||| ||||||||||||||||
Sbjct: 108 tcccacattcatattgatgctaataaatctagacatatata 68
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 8e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| || | ||| ||||||||| |||||||||||
Sbjct: 14 cgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaatcta 73
Query: 63 g 63
|
Sbjct: 74 g 74
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctag 27
|||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
|||||| |||||||| | ||||||||| ||| ||| |||| |||| ||||||||||||
Sbjct: 122 gtttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaatctag 63
Query: 64 acatatata 72
|||| ||||
Sbjct: 62 acatctata 54
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| |||| ||| || | | || |||||||||||
Sbjct: 14 cgtttcacaatgtaagactttctagcattacccacattcatttagttgttaatgaatcta 73
Query: 63 gacat 67
|||||
Sbjct: 74 gacat 78
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| | | ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaatcta 73
Query: 63 gacatatat 71
|||||||||
Sbjct: 74 gacatatat 82
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 8e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 4 gtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctag 63
|||||| |||||||| | ||||||||| |||| |||| ||| |||| ||||||||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgcccacatttttatggatgttaatgaatctag 74
Query: 64 a 64
|
Sbjct: 75 a 75
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 33 cccagatttatattgatggtaatgaatctagacatatata 72
|||| ||| |||| |||| |||||||||||||||||||||
Sbjct: 99 cccacattcatatagatgctaatgaatctagacatatata 60
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattcta 26
||||||||||||||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattcta 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgat 49
|||||||||||| |||||||||||| || | || ||||||||||||
Sbjct: 99 cgtttcacaatgcaagtcattctagtatttttcacatttatattgat 53
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||| ||||||||||||
Sbjct: 95 cgtttcacaatgtaaatcattctagcat 68
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatatt 46
||||||||||||||||||||| ||| || ||||| ||| |||||
Sbjct: 100 cgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| ||||||||| |||| || || || |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagattttctagcattgcccacatatacatagatgttaatgaatcta 73
Query: 63 gacatata 70
|||||||
Sbjct: 74 aacatata 81
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| ||| ||| |||| |||| |||| ||||||
Sbjct: 131 cgtttcacaatgtaagactttctagcattgtccacattcatatagatgttaataaatcta 72
Query: 63 gaca 66
||||
Sbjct: 71 gaca 68
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||| ||||||||||||||||||||
Sbjct: 137 cgtttcataatgtaagtcattctagcat 110
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||| ||||||||||||||||||||
Sbjct: 127 cgtttcataatgtaagtcattctagcat 100
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||||||| ||||||||||||
Sbjct: 14 cgtttcacaatgtaactcattctagcat 41
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 22 ttctagcatgtcccagatttatattgatggtaatgaatctagacatatatagttatctgg 81
||||||||| |||| ||| |||| |||| |||||||||||| || ||||| ||||| |
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 82 attcatta 89
||||||||
Sbjct: 46 attcatta 39
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | ||||||||| |||| || || | |||| |||| ||||||
Sbjct: 149 cgtttcacaatgtaagactttctagcattgcccacatacatttagatgttaataaatcta 90
Query: 63 gacatata 70
||||||||
Sbjct: 89 gacatata 82
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| |||||||| | ||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 131 cgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaatcta 72
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||| ||||||||||||||||||
Sbjct: 14 cgtttcacagtgtaagtcattctagcat 41
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcat 30
||||||||||| ||||||||||||||||
Sbjct: 80 cgtttcacaatataagtcattctagcat 53
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 11 aatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatctagacatata 70
|||||||||||||||| ||| | ||| ||| ||| |||| || ||||||||||||||||
Sbjct: 121 aatgtaagtcattctaacattttccacattcgtatggatgttagtgaatctagacatata 62
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | || ||| || ||| ||| |||| |||| |||||||||||
Sbjct: 149 cgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatcta 90
Query: 63 gacatat 69
|||||||
Sbjct: 89 gacatat 83
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 24 ctagcatgtcccagatttatattgatggtaatgaatctagaca 66
||||||| ||||| ||| ||||||||| ||||||||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagaca 46
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||| | ||||||||| |||| || |||| |||| |||||||||||
Sbjct: 127 cgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaatcta 68
Query: 63 gacatat 69
||||||
Sbjct: 67 aacatat 61
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||||||| |||| | ||||||||| |||| || |||| |||| |||||||||||
Sbjct: 14 cgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaatcta 73
Query: 63 gacatat 69
||||||
Sbjct: 74 aacatat 80
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 22 ttctagcatgtcccagatttatattgatggtaatgaatctagacatatata 72
||||||||| |||| ||| |||| ||| |||||||||||||||||||||
Sbjct: 104 ttctagcattacccacattcatatatatgttaatgaatctagacatatata 54
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | || ||| || ||| ||| |||| |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaatcta 73
Query: 63 gacatat 69
|||||||
Sbjct: 74 gacatat 80
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
|||||||||||||||| | || |||| | |||| ||| || | |||| |||||||||||
Sbjct: 14 cgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgttaatgaatcta 73
Query: 63 gacatat 69
|||||||
Sbjct: 74 gacatat 80
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 22 ttctagcatgtcccagatttatattgatggtaatgaatctagacatatata 72
||||||||| |||| ||| |||| |||| ||||||||||||||| |||||
Sbjct: 9 ttctagcatcacccacattcatatagatgttaatgaatctagacacatata 59
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 3 cgtttcacaatgtaagtcattctagcatgtcccagatttatattgatggtaatgaatcta 62
||||||| ||| |||| | ||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 131 cgtttcataatataagactttctagcattacccatattcatatagatgctaatgaatcta 72
Query: 63 ga 64
||
Sbjct: 71 ga 70
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 22 ttctagcatgtcccagatttatattgatggtaatgaatctagacatatat 71
||||||||| |||| ||| |||| |||| |||||||||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatat 57
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 47 gatggtaatgaatctagacatatata 72
|||| |||||||||||||||||||||
Sbjct: 105 gatgttaatgaatctagacatatata 80
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 22 ttctagcatgtcccagatttatattgatggtaatgaatctagacat 67
||||||||| |||| ||| |||| |||| ||||||||||||||||
Sbjct: 98 ttctagcattgcccacattcatatagatgttaatgaatctagacat 53
