miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 115/130 (88%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttt 64
Query: 84 atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
| ||||||| ||||||||||| ||| ||| | || ||||||||| |||||||||||||||
Sbjct: 65 a-gattcattaacatcaatatgaatgtgggatatgctagaatga-cttatattgtgaaac 122
Query: 144 gaaggaagta 153
| ||||||||
Sbjct: 123 ggaggaagta 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/119 (85%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| |||||||||||||||| | || ||| ||||||||||| |||| || | |
Sbjct: 121 tttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaatc-taa 63
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||| ||| |||||||| ||||||||| |||| ||||||||||| ||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatga-cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 111 bits (56), Expect = 3e-24
Identities = 104/119 (87%), Gaps = 5/119 (4%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||| ||| ||||||||||||||||||||| |||| |||||||||| |||||| |
Sbjct: 118 tttcataatgtaagtcattctagcattttccatattcatattgatgta----attcatta 63
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||| |||||||||||| ||||||||| |||| ||||||||||| ||||||||
Sbjct: 62 acatcaatatgaatatggaaaatgctagaatga-cttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 8e-19
Identities = 82/94 (87%), Gaps = 4/94 (4%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| ||||||||||||||||||||| |||| ||||||||||| |||| |
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat----t 71
Query: 95 acatcaatataaatatggaaaatactagaatgac 128
|||||||||| |||||||||||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgac 105
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 111 bits (56), Expect = 3e-24
Identities = 108/122 (88%), Gaps = 3/122 (2%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| ||||||||||||||||||||| |||| ||||||||||| | ||||||| |
Sbjct: 120 tttcacaatgtaagtcattctagcattttccatattcatattgatgttta-gattcat-a 63
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||||| ||| |||||||| ||||||| | |||| ||||||||||| ||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaat-aacttacattgtgaaacggagggagtat 4
Query: 155 at 156
||
Sbjct: 3 at 2
Score = 111 bits (56), Expect = 3e-24
Identities = 115/130 (88%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||| ||||||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 84 atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
|||| || | ||||||||||| |||||||||||| ||||||||| |||| ||||||||||
Sbjct: 64 atgaatc-taaacatcaatatgaatatggaaaatgctagaatga-cttacattgtgaaac 121
Query: 144 gaaggaagta 153
| ||||||||
Sbjct: 122 ggaggaagta 131
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 107 bits (54), Expect = 5e-23
Identities = 120/140 (85%), Gaps = 7/140 (5%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtt 63
Query: 83 gatgattc-----atcaacatcaatataaatatggaaaatactagaatgaccttatattg 137
|||| || || ||||||||||| ||| | | ||||| |||||||| |||||||||
Sbjct: 64 aatgaatctagatattaacatcaatatgaatgtaggaaatagtagaatga-cttatattg 122
Query: 138 tgaaacgaaggaagtatata 157
||||||| ||||||||||||
Sbjct: 123 tgaaacggaggaagtatata 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 102/124 (82%), Gaps = 6/124 (4%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat-----gatt 89
||||||||| |||||||||||| |||| | ||| ||||||||||| || ||||
Sbjct: 127 tttcacaatataagtcattctactatttcctacattcatattgatgttaatatctagatt 68
Query: 90 catcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaagga 149
||| ||||||||||| ||||| |||||| ||||||||| |||| ||||||||||| |||
Sbjct: 67 cattaacatcaatatgaatatagaaaatgctagaatga-cttacattgtgaaacggaggg 9
Query: 150 agta 153
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 101 bits (51), Expect = 3e-21
Identities = 118/139 (84%), Gaps = 9/139 (6%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || |||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 83 gat-------gattcatcaacatcaatataaatatggaaaatactagaatgaccttatat 135
|| ||||||| ||||||||||| ||||||| |||| ||||||||| |||| ||
Sbjct: 64 aatgaatctagattcattaacatcaatatgaatatgggaaatgctagaatga-cttacat 122
Query: 136 tgtgaaacgaaggaagtat 154
| ||||||| |||||||||
Sbjct: 123 tatgaaacggaggaagtat 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 105/126 (83%), Gaps = 8/126 (6%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga------- 87
||||| ||| |||||||||||||||||| || |||| ||||||||||| ||||
Sbjct: 129 tttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 70
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaag 147
||||| ||||||||||| ||||||| |||| ||||||||| |||| ||||||||||| ||
Sbjct: 69 ttcattaacatcaatatgaatatgggaaatgctagaatga-cttacattgtgaaacggag 11
Query: 148 gaagta 153
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 104/120 (86%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattc-atc 93
||||||||| |||||||||||||||||| || ||| ||||||||||| |||| || ||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctatt 60
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||||| ||| |||||||| ||| ||||| ||||||||||||||| ||||||||
Sbjct: 59 aacatcaatatgaatgtggaaaatgctataatga-cttatattgtgaaacagaggaagta 1
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/110 (87%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat-gattcatc 93
||||||||| ||||||||| ||||||||||| ||| ||||||||||| || |||||||
Sbjct: 12 tttcacaatataagtcattatagcattttccacattcatattgatgttaatagattcatt 71
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
||||||||||| ||| ||| |||| ||||||||| |||| ||||||||||
Sbjct: 72 aacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaac 120
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/130 (86%), Gaps = 5/130 (3%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||| | | ||||||| ||| |||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgtag 64
Query: 84 atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
|| |||| ||||||||||| ||| |||||||||||| ||||| |||||||||||||||
Sbjct: 65 at---tcattaacatcaatatgaatgtggaaaatactaaaatga-cttatattgtgaaac 120
Query: 144 gaaggaagta 153
| ||||||||
Sbjct: 121 ggaggaagta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 101/120 (84%), Gaps = 4/120 (3%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| ||||||||| ||| ||||||| ||| ||||||||||| |||| |||
Sbjct: 119 tttcacaatataagtcattttagtattttccacattcatattgatgttaatga---atct 63
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||||| ||| |||||||||| | ||||| |||| ||||||||||| ||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatga-cttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 97.6 bits (49), Expect = 5e-20
Identities = 115/133 (86%), Gaps = 6/133 (4%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||| ||||| || ||| |||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 84 atgattc---atcaacatcaatataaatatggaaaatactagaatgaccttatattgtga 140
|||| || || ||||||||||| ||| |||||||| ||||||||| ||||||||||||
Sbjct: 75 atgaatctagat-aacatcaatatgaatgtggaaaatgctagaatga-cttatattgtga 18
Query: 141 aacgaaggaagta 153
|||| ||||||||
Sbjct: 17 aacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 107/124 (86%), Gaps = 5/124 (4%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat---gattca 91
||||||||| ||||||||||||||||||||| ||| ||||||||||| || ||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacattcatattgatgtt-atctagattca 74
Query: 92 tcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaag 151
| ||||||||||| ||| ||| |||| |||||||| |||||||||||||||| ||| ||
Sbjct: 75 ttaacatcaatatgaatgtgggaaatgttagaatga-cttatattgtgaaacggagggag 133
Query: 152 tata 155
||||
Sbjct: 134 tata 137
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 114/134 (85%), Gaps = 5/134 (3%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 84 atga---ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtga 140
|| | | || || |||||||| ||| ||| |||| ||||||||| ||||||||||||
Sbjct: 65 ataaatttagataaatatcaatatgaatgtgggaaatgctagaatga-cttatattgtga 123
Query: 141 aacgaaggaagtat 154
|||| |||||||||
Sbjct: 124 aacggaggaagtat 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 102/122 (83%), Gaps = 4/122 (3%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatg---attca 91
||||||||| |||||||||||||||||| || ||| |||||||| || || ||| |
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgatatttatctaaattta 66
Query: 92 tcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaag 151
| || |||||||||||| |||||||| ||||||||| |||| ||||||||||| ||| ||
Sbjct: 65 ttaatatcaatataaatgtggaaaatgctagaatga-cttacattgtgaaacggagggag 7
Query: 152 ta 153
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 78/87 (89%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||||| |
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatgct- 81
Query: 84 atgattcatcaacatcaatataaatat 110
| |||||| |||||||||||||||||
Sbjct: 80 -taattcattaacatcaatataaatat 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 67/76 (88%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 67 tatttatattgatgttgatgattcatcaacatcaatataaatatggaaaatactagaatg 126
|||||||||||||||| |||| | | | |||||||||||||||||||||| ||||||||
Sbjct: 56 tatttatattgatgttaatgaatta--agcatcaatataaatatggaaaatgctagaatg 113
Query: 127 accttatattgtgaaa 142
| |||||||| |||||
Sbjct: 114 a-cttatattatgaaa 128
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 114/134 (85%), Gaps = 4/134 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| |||||||||||||||||| || ||| ||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttg 76
Query: 84 --atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaa 141
||||||| |||||||||| ||| ||| |||| ||||||||| |||| ||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaa 17
Query: 142 acgaaggaagtata 155
||| ||||||||||
Sbjct: 16 acggaggaagtata 3
Score = 63.9 bits (32), Expect = 7e-10
Identities = 100/121 (82%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattc--at 92
||||||||| |||||||||||||||||| || ||| |||||||||| |||| ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctaga 75
Query: 93 caacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagt 152
|||||||||||| ||| ||| |||| ||||||||| |||| ||| ||||||| ||| |||
Sbjct: 76 caacatcaatatgaatgtgggaaatgctagaatga-cttacattatgaaacggagggagt 134
Query: 153 a 153
|
Sbjct: 135 a 135
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 87.7 bits (44), Expect = 5e-17
Identities = 114/135 (84%), Gaps = 6/135 (4%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| |||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtt 79
Query: 83 gat----gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgt 138
|| ||||||| | ||||||||| ||| ||| |||| ||||||||| |||| |||||
Sbjct: 78 aataaaagattcattaccatcaatatgaatgtgggaaatgctagaatga-cttacattgt 20
Query: 139 gaaacgaaggaagta 153
|||||| ||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 101/123 (82%), Gaps = 5/123 (4%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga----ttc 90
||||||||| |||||||||||||||||| || ||| ||||||||| | |||| ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaatctttt 75
Query: 91 atcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaa 150
|| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||| ||| |
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatga-cttactttgtgaaacggaggga 134
Query: 151 gta 153
|||
Sbjct: 135 gta 137
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 85.7 bits (43), Expect = 2e-16
Identities = 112/135 (82%), Gaps = 13/135 (9%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||||||||| |||||||| | ||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtt 63
Query: 83 gatgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaa 142
|||||||||||||||||| |||| ||| |||||| |||||||||||||
Sbjct: 64 -----------aacatcaatataaatatgagaaatgctaaaatgac-ttatattgtgaaa 111
Query: 143 cgaaggaagtatata 157
|| ||||||||||||
Sbjct: 112 cggaggaagtatata 126
Score = 60.0 bits (30), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||| ||||||||| |||||||| | ||||||||||||||||
Sbjct: 111 tttcacaatataagtcattttagcatttctcatatttatattgatgtt 64
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||||||||||||||||||||| |||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 83 gatga 87
||||
Sbjct: 64 aatga 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| |||||||||||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatggaaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 92 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 150
Query: 146 aggaagta 153
||||||||
Sbjct: 151 aggaagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 95
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 83.8 bits (42), Expect = 7e-16
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||||||| |||| |||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 84 atga 87
||||
Sbjct: 85 atga 82
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| |||||||||||| ||||||||| |||| |||||||||||
Sbjct: 79 gattcattaacatcaatatgaatatggaaaatgctagaatga-cttacattgtgaaacgg 137
Query: 146 aggaagta 153
||| ||||
Sbjct: 138 agggagta 145
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 115/138 (83%), Gaps = 9/138 (6%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtt 82
Query: 83 gatgattc-------atcaacatcaatataaatatggaaaatactagaatgaccttatat 135
|||| || || ||||| ||||| ||| ||| |||| ||||||||| |||| ||
Sbjct: 81 aatgaatctatacatattaacattaatatgaatgtgggaaatgctagaatga-cttacat 23
Query: 136 tgtgaaacgaaggaagta 153
||||||||| ||||||||
Sbjct: 22 tgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 105/126 (83%), Gaps = 8/126 (6%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat-------ga 87
||||||||| |||||||||||||||||| || ||| ||||| ||||| || ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaatatgtataga 75
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaag 147
||||| ||||||||||| ||| |||||||| ||||||||| |||||||||||||||| ||
Sbjct: 76 ttcattaacatcaatatgaatgtggaaaatgctagaatga-cttatattgtgaaacggag 134
Query: 148 gaagta 153
| ||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgat 91
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| || ||||||||||||||||||||| ||||||||| |||| |||||||||||
Sbjct: 80 gattcattaatatcaatataaatatggaaaatgctagaatga-cttacattgtgaaacgg 138
Query: 146 aggaagtatata 157
||| ||||||||
Sbjct: 139 agggagtatata 150
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 113/134 (84%), Gaps = 5/134 (3%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || |||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 84 atga---ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtga 140
|| | | || || |||||||| ||| ||| |||| ||||||||| ||||||||||||
Sbjct: 65 ataaatttagataaatatcaatatgaatgtgggaaatgctagaatga-cttatattgtga 123
Query: 141 aacgaaggaagtat 154
|||| |||||||||
Sbjct: 124 aacggaggaagtat 137
Score = 67.9 bits (34), Expect = 4e-11
Identities = 101/122 (82%), Gaps = 4/122 (3%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat---gattca 91
||||||||| |||||||||||||||||| || ||| |||||||| || || ||| |
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatattgatatttatctaaattta 66
Query: 92 tcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaag 151
| || |||||||||||| ||| |||| ||||||||| |||| ||||||||||| ||| ||
Sbjct: 65 ttaatatcaatataaatgtgggaaatgctagaatga-cttacattgtgaaacggagggag 7
Query: 152 ta 153
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 83.8 bits (42), Expect = 7e-16
Identities = 102/120 (85%), Gaps = 2/120 (1%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgt-tgatgattcatc 93
||||||||| ||||||||| | ||||||||| ||| |||||||||| | ||||||||
Sbjct: 16 tttcacaatgtaagtcattttggcattttccacattcatattgatgtatcttgattcatt 75
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||||| ||| ||| |||| ||| ||||| |||| ||||||||||| ||||||||
Sbjct: 76 aacatcaatatgaatgtgggaaatgctaaaatga-cttacattgtgaaacggaggaagta 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 93/111 (83%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| ||||||||| |||||||| || ||| ||||||||||| |||| ||| |
Sbjct: 123 tttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaatcaaga 64
Query: 95 -acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacg 144
|||||||||| ||| |||||||| | | ||||| |||| |||||||||||
Sbjct: 63 tacatcaatatgaatgtggaaaatgccaaaatga-cttacattgtgaaacg 14
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 115/137 (83%), Gaps = 5/137 (3%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||| ||| ||||||||| ||| ||||| | |||| |||||||||
Sbjct: 137 gtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatgac 78
Query: 83 gatg---attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtg 139
|| |||||| ||||||||||| |||||||||||| |||||||| |||| ||||||
Sbjct: 77 tatctacattcattaacatcaatatgaatatggaaaatgttagaatga-cttacattgtg 19
Query: 140 aaacgaaggaagtatat 156
||||| |||||||||||
Sbjct: 18 aaacggaggaagtatat 2
Score = 69.9 bits (35), Expect = 1e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||| |||||||| |||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaacattttccatattcatattgatgttaatga 68
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 112/133 (84%), Gaps = 5/133 (3%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||| ||||| || ||| |||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 84 atgattc---atcaacatcaatataaatatggaaaatactagaatgaccttatattgtga 140
|||| || || | |||||||| ||||||| |||| ||||||||| |||| |||||||
Sbjct: 76 atgaatctagatagatatcaatatgaatatgggaaatgctagaatga-cttacattgtga 18
Query: 141 aacgaaggaagta 153
|||| ||||||||
Sbjct: 17 aacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 102/122 (83%), Gaps = 4/122 (3%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat---gattca 91
||||||||| |||||||||||||||||| || |||| |||||||| | || ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcatattgatatctatctagattca 75
Query: 92 tcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaag 151
| ||||||||||| ||| ||| |||| |||||||| |||| ||||||||||| ||| ||
Sbjct: 76 ttaacatcaatatgaatgtgggaaatgttagaatga-cttacattgtgaaacggagggag 134
Query: 152 ta 153
||
Sbjct: 135 ta 136
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 100/118 (84%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| |||||||||||||||||| || ||| |||| |||| | ||||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccgcattcatatatatgtcta-gattcatta 74
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagt 152
||||||||| |||| ||||||| ||| |||||| ||||||||||||||| |||||||
Sbjct: 75 tcatcaatatgaatacggaaaatgctaaaatgac-ttatattgtgaaacggaggaagt 131
Score = 63.9 bits (32), Expect = 7e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatg 80
||||||||| ||||||||| ||||||||||| |||| |||||||||
Sbjct: 121 tttcacaatataagtcattttagcattttccgtattcatattgatg 76
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 71 gattcattatcatcaatataaatatgagaaatactagaatga-cttatattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatg 80
||||||||| ||||||||||||| |||| | ||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagtatttctcatatttatattgatg 61
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 110/130 (84%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 25 tactccctcctttc-acaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||| ||||| ||||||||| |||||||| || |||||||||||||| |
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 84 atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
|||| || | |||||||||| ||| ||| |||| |||||||| |||| ||||||||||
Sbjct: 65 atgaatc-tagacatcaatatgaatgtgggaaatgctagaatg-tcttacattgtgaaac 122
Query: 144 gaaggaagta 153
| ||||||||
Sbjct: 123 ggaggaagta 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 101/120 (84%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| |||| ||||||||||||| || ||| |||||||||| | ||||||| |
Sbjct: 121 tttcacaatgtaagacattctagcatttcccacattcatattgatgtcta-gattcatta 63
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
||||||||||||||||| |||| ||| ||||| |||| |||||| |||| ||| |||||
Sbjct: 62 gcatcaatataaatatgggaaatgctataatga-cttacattgtggaacggagggagtat 4
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 111/132 (84%), Gaps = 5/132 (3%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || ||| |||| ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 63
Query: 83 gatgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaa 142
| |||| |||||| |||| ||| ||| |||| |||||||||| ||| |||||||||
Sbjct: 64 aac---tcattaacatcgatatgaatgtgggaaatgctagaatgac-ttacattgtgaaa 119
Query: 143 cgaaggaagtat 154
|| |||||||||
Sbjct: 120 cggaggaagtat 131
Score = 61.9 bits (31), Expect = 3e-09
Identities = 98/119 (82%), Gaps = 4/119 (3%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| |||||||||||||||||| || ||| |||| |||||| |||| | |
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga---gtta 63
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||| |||| ||| ||| |||| ||||||||| |||| ||||||||||| ||| ||||
Sbjct: 62 acatcgatatgaatgtgggaaatgctagaatga-cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 77.8 bits (39), Expect = 5e-14
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || |||| |||||||||||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 81
Query: 83 gatga 87
||||
Sbjct: 80 aatga 76
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||||| |||| ||||||||| |||| |||||||||||
Sbjct: 73 gattcattaacatcaatatgaatatgggaaatgctagaatga-cttacattgtgaaacgg 131
Query: 146 aggaagta 153
||| ||||
Sbjct: 132 agggagta 139
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 77.8 bits (39), Expect = 5e-14
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || |||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 83 gatga 87
||||
Sbjct: 64 aatga 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||||| |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 77.8 bits (39), Expect = 5e-14
Identities = 111/132 (84%), Gaps = 4/132 (3%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| | ||| | |||||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 84 at--gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaa 141
|| ||||||| || |||||| | ||| ||| |||| ||||||||| |||||||||||||
Sbjct: 65 atgagattcattaatatcaatgtgaatgtgggaaatgctagaatga-cttatattgtgaa 123
Query: 142 acgaaggaagta 153
||| ||||||||
Sbjct: 124 acggaggaagta 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 99/121 (81%), Gaps = 3/121 (2%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga--ttcat 92
||||||||| |||||||||||||||||| || ||| | |||||| || |||| ||||
Sbjct: 124 tttcacaatataagtcattctagcatttcccacattcacattgatattaatgaatctcat 65
Query: 93 caacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagt 152
|| |||||| | ||| || |||| ||||||||| |||||||||||||||| ||| |||
Sbjct: 64 taatatcaatgtgaatgtgtgaaatgctagaatga-cttatattgtgaaacggagggagt 6
Query: 153 a 153
|
Sbjct: 5 a 5
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | |||||||||||||||| ||||||||||||||| |||| |||||||||||
Sbjct: 71 gattcattagcatcaatataaatatgaaaaatactagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagtatat 156
||| |||||||
Sbjct: 12 agggagtatat 2
Score = 69.9 bits (35), Expect = 1e-11
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| ||||||||||||| ||||| | ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatg 61
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 108/130 (83%), Gaps = 9/130 (6%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| |||||||||||||||||| | |||| |||||||| ||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 84 atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
|||| || | ||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 66 atgaatc-------taaatataaatgtggaaaatgctagaatgac-ttatattgtgaaac 15
Query: 144 gaaggaagta 153
| ||||||||
Sbjct: 14 ggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatatt 76
||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 111/132 (84%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || ||| ||||| ||| |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 83 gatgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaa 142
|||| || | | |||||||| ||| ||| |||| ||||||||| |||| |||||||||
Sbjct: 73 aatgaatc-tagatatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaa 16
Query: 143 cgaaggaagtat 154
|| |||||||||
Sbjct: 15 cggaggaagtat 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 100/119 (84%), Gaps = 2/119 (1%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| |||||||||||||||||| || ||| |||||||| | | ||||||| |
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatatcta-gattcatta 74
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||| ||||| ||| ||| |||| ||||||||| |||||||||||||||| ||| ||||
Sbjct: 75 gcattaatatgaatgtgggaaatgctagaatga-cttatattgtgaaacggagggagta 132
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 75.8 bits (38), Expect = 2e-13
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgat 91
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| || ||||||||||||||||||||| ||| ||||| |||| |||||||||||
Sbjct: 80 gattcattaatatcaatataaatatggaaaatgctataatga-cttacattgtgaaacgg 138
Query: 146 aggaagtatata 157
||| ||||||||
Sbjct: 139 agggagtatata 150
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 84 atga 87
||||
Sbjct: 98 atga 95
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| |||||||| ||||||||| |||| |||||||||||
Sbjct: 92 gattcattaacatcaatatgaatgtggaaaatgctagaatga-cttacattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 111/132 (84%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || ||| ||||| ||| |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 83 gatgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaa 142
|||| || | | |||||||| ||| ||| |||| ||||||||| |||| |||||||||
Sbjct: 64 aatgaatc-tagatatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaa 121
Query: 143 cgaaggaagtat 154
|| |||||||||
Sbjct: 122 cggaggaagtat 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 100/119 (84%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| |||||||||||||||||| || ||| |||||||| | | ||||||| |
Sbjct: 121 tttcacaatgtaagtcattctagcatttcccacattcatattgatatcta-gattcatta 63
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||| ||||| ||| ||| |||| ||||||||| |||||||||||||||| ||| ||||
Sbjct: 62 gcattaatatgaatgtgggaaatgctagaatga-cttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaag 147
||||| ||||||||||||||| ||| |||||||||||||| |||| ||||||||||| ||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatga-cttacattgtgaaacggag 145
Query: 148 gaagta 153
||||||
Sbjct: 146 gaagta 151
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaag 147
||||| ||||||||||| ||| ||| ||||| |||||||| |||||||||||||||| ||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatga-cttatattgtgaaacggag 11
Query: 148 gaagtata 155
| ||||||
Sbjct: 10 ggagtata 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||||||| |||| || ||||||||||||||| ||||
Sbjct: 140 tttcacaatgtaagtcattctagtatttcccacatttatattgatgttaatga 88
Score = 52.0 bits (26), Expect = 3e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||| |||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 92/109 (84%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 46 aagtcattctagcattttccntatttatattgatgttgat-gattcatcaacatcaatat 104
||||||||||| ||||| || ||||| | ||||||| | ||||||| |||||||||||
Sbjct: 112 aagtcattctaacatttcccacatttacagtgatgtttctagattcattaacatcaatat 53
Query: 105 aaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||| |||||||| ||||||||| |||| ||||||||||| ||| ||||
Sbjct: 52 gaatgtggaaaatgctagaatga-cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 114/138 (82%), Gaps = 9/138 (6%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtt 82
Query: 83 gatgattc-------atcaacatcaatataaatatggaaaatactagaatgaccttatat 135
|||| || || ||||| ||||| ||| ||| |||| ||||||||| |||| ||
Sbjct: 81 aatgaatctatacatattaacattaatatgaatgtgggaaatgctagaatga-cttacat 23
Query: 136 tgtgaaacgaaggaagta 153
||||||||| ||||||||
Sbjct: 22 tgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 104/126 (82%), Gaps = 8/126 (6%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat-------ga 87
||||||||| |||||||||||||||||| || ||| ||||| ||||| || ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattaatgttaatatgtataga 75
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaag 147
||||| ||||||||||| ||| ||| |||| ||||||||| |||||||||||||||| ||
Sbjct: 76 ttcattaacatcaatatgaatgtgggaaatgctagaatga-cttatattgtgaaacggag 134
Query: 148 gaagta 153
| ||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 114/136 (83%), Gaps = 8/136 (5%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| ||||||||||||||||||| | |||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
Query: 84 -atg-----attcatcaacatcaatataaatatggaaaatactagaatgaccttatattg 137
||| |||||| ||||||||||| ||| |||||||| |||||||| ||||||||
Sbjct: 65 tatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatga-cttatatta 123
Query: 138 tgaaacgaaggaagta 153
||||||| ||||||||
Sbjct: 124 tgaaacggaggaagta 139
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||| ||| |||||||||||| |||||||| ||| ||||||||||| ||||
Sbjct: 128 tttcataatataagtcattctaacattttccacattcatattgatgttaatga 76
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 73.8 bits (37), Expect = 7e-13
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgt 81
||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 141 tttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||| |||||||||||| ||||||||| |||| ||||||||||| ||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatga-cttacattgtgaaacggaggaagta 152
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||||||| ||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 89 tcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaagg 148
|||| |||||| |||| ||| |||||||| |||||||||| ||| ||||||||||| |||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgac-ttacattgtgaaacggagg 10
Query: 149 aagta 153
||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 73.8 bits (37), Expect = 7e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtt 87
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||||||||||| |||| ||||||||| |||| ||||||||||| ||| ||||
Sbjct: 87 aacatcaatataaatatgagaaatgctagaatga-cttacattgtgaaacggagggagta 145
Score = 44.1 bits (22), Expect = 6e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 96 catcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||| ||| ||| |||| ||| |||||| ||| ||||||||||| ||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgac-ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 73.8 bits (37), Expect = 7e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||||| ||| |||||||| ||||||||| |||| ||||||||||| ||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatga-cttacattgtgaaacggagggagta 5
Query: 154 tat 156
|||
Sbjct: 4 tat 2
Score = 54.0 bits (27), Expect = 7e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 38 cacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 132 cacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 73.8 bits (37), Expect = 7e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtt 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||||||| | |||||||| ||||||||| |||| ||||||||||| ||| ||||
Sbjct: 81 aacatcaatataattgtggaaaatgctagaatga-cttacattgtgaaacggagggagta 139
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||||| ||||||||| ||||||||| ||||||||| | | ||||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||||||||||||| ||| |||| ||||||||| ||||||||||||||||
Sbjct: 90 gattcattaacatcaatataaacgtgggaaatgctagaatga-cttatattgtgaaacgg 148
Query: 146 aggaagtat 154
|||||||||
Sbjct: 149 aggaagtat 157
Score = 69.9 bits (35), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 83 gatga 87
||||
Sbjct: 64 aatga 68
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || |||||||||||||| ||||
Sbjct: 145 tttcacaatataagtcattctagcatttcccacgtttatattgatgttaatga 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 7e-13
Identities = 81/95 (85%), Gaps = 6/95 (6%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||||||||| ||||||||||| ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtt 63
Query: 83 gatgattcatcaacatcaatataaatatggaaaat 117
||||| ||||||||||| ||| ||||||||
Sbjct: 64 aatgat-----aacatcaatatgaatgtggaaaat 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 108/131 (82%), Gaps = 7/131 (5%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||| | ||| ||||||||||| ||| |||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtt 70
Query: 83 gatgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaa 142
|||| ||||||||||| ||| |||||||| ||| ||||| |||| |||||||||
Sbjct: 69 -----atcattaacatcaatatgaatgtggaaaatgctaaaatga-cttacattgtgaaa 16
Query: 143 cgaaggaagta 153
|| ||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 110/130 (84%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||||||| |||| |||| || |
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat--atatat 73
Query: 84 atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
|| |||||| |||| |||||| ||| || |||| ||||||||| |||| ||||||||||
Sbjct: 72 at-attcattaacagcaatatgaatgtgagaaatgctagaatga-cttacattgtgaaac 15
Query: 144 gaaggaagta 153
| ||||||||
Sbjct: 14 ggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 98/120 (81%), Gaps = 4/120 (3%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatca 94
||||||||| |||||||||||||||||| | ||| |||||| |||| |||| ||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgctgttaatga---atat 72
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
| || |||| |||||||||||| ||||||||| |||| ||||||||||| ||| |||||
Sbjct: 73 atatatatatgaatatggaaaatgctagaatga-cttacattgtgaaacggagggagtat 131
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 71.9 bits (36), Expect = 3e-12
Identities = 114/139 (82%), Gaps = 10/139 (7%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||| |||||||||||||| | ||| |||||||||||
Sbjct: 142 gtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtt 83
Query: 83 gatga--------ttcatcaacatcaatataaatatggaaaatactagaatgaccttata 134
|||| ||||| ||||||||||| ||| ||| |||| ||||||||| |||| |
Sbjct: 82 aatgaatcaatgattcattaacatcaatatgaatgtgggaaatgctagaatga-cttaca 24
Query: 135 ttgtgaaacgaaggaagta 153
|||||||||| ||||||||
Sbjct: 23 ttgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcat 92
||||||||| |||||||||||||||||| || ||| ||||||||||| |||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcat 73
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 101/121 (83%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat--gattcat 92
|||||| || |||||||||||||||||| | ||| ||||||||| | || |||||||
Sbjct: 16 tttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatgagattcat 75
Query: 93 caacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagt 152
| ||||||||| ||| || |||| ||||||||| |||||||||||||||| |||||||
Sbjct: 76 tagcatcaatatgaatgtgagaaatgctagaatga-cttatattgtgaaacggaggaagt 134
Query: 153 a 153
|
Sbjct: 135 a 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 124 tttcacaatataagtcattctagcattt 97
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||||||||| |||||||| |||| |||||||||||
Sbjct: 91 gattcattaacatcaatatgaatgtggaaaatattagaatga-cttacattgtgaaacgg 149
Query: 146 aggaagtatata 157
||| ||||||||
Sbjct: 150 agggagtatata 161
Score = 60.0 bits (30), Expect = 1e-08
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||| ||||||| ||| |||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 84 atga 87
||||
Sbjct: 97 atga 94
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||| ||||||||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattaacattaatataaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagtatata 157
||||||||||||
Sbjct: 12 aggaagtatata 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||||||||| ||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatga 68
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 137 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 85
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacg 144
|||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacg 139
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 69.9 bits (35), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 99
Query: 83 gatga 87
||||
Sbjct: 98 aatga 94
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 91 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 149
Query: 146 aggaagta 153
||| ||||
Sbjct: 150 agggagta 157
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 114/137 (83%), Gaps = 8/137 (5%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg-tt 82
|||||||||| ||||||||| ||||||||| ||||||||||| ||| ||||||||| |
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
Query: 83 gat-----gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattg 137
|| ||||||| | |||||||||||||||| |||| ||| ||||| |||| ||||
Sbjct: 79 tatgtctagattcattagcatcaatataaatatgagaaatgctaaaatga-cttacattg 21
Query: 138 tgaaacgaaggaagtat 154
||||||| |||||||||
Sbjct: 20 tgaaacggaggaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatg 80
||||||||| ||||||||| |||||||| | ||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttctcatatttatattgatg 61
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||||| ||||||||||||||| | |||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 83 gatga 87
||||
Sbjct: 64 aatga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||||| | |||||||| ||||||| | |||| |||||||||||
Sbjct: 71 gattcattaacatcaatataattgtggaaaatgctagaat-aacttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| | ||||||||| |||||||||||||||||||||| |||||| |||| |||| |
Sbjct: 70 attcattagcatcaatatgaatatggaaaatactagaatga-cttatactgtggaacgga 12
Query: 147 ggaagta 153
|||||||
Sbjct: 11 ggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 45 taagtcattctagcattttccntatttatattgatg 80
||||||||||||| ||||||| |||| |||||||||
Sbjct: 26 taagtcattctagtattttccatattcatattgatg 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 25 tactccctcctttc-acaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||| ||||| |||||||||||| ||||| | |||| |||||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatg 102
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatg 102
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||| ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 92 gattcattagcatcaatatgaatatagaaaatgctagaatgac-ttatattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatga 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 89 tcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaagg 148
|||| |||||||||| ||| |||||||| |||||||||| ||| ||||||||||| |||
Sbjct: 68 tcattaacatcaatacgaatgtggaaaatgctagaatgac-ttacattgtgaaacggagg 10
Query: 149 aagtat 154
||||||
Sbjct: 9 aagtat 4
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 69.9 bits (35), Expect = 1e-11
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatg 96
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||||||| |||||||| ||| ||||| ||||||||||||||||
Sbjct: 86 gattcattagcatcaatataaatgtggaaaatgctaaaatga-cttatattgtgaaacgg 144
Query: 146 aggaagtat 154
||| |||||
Sbjct: 145 agggagtat 153
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||| ||||||| || |||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 53/59 (89%), Gaps = 3/59 (5%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||||||| ||||||||| |||||||||||||||||| | |||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtt 100
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||||| |||| || |||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgcttgaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 84 atga 87
||||
Sbjct: 98 atga 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 92 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttcc 65
|||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttcc 46
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||| |||||||||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattaacaccaatataaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcctttc-acaatntaagtcattctagcattttccntatttatattgat 79
||||||||||| ||| ||||| ||||||||||||||||||| | ||| ||||||||
Sbjct: 159 gtactccctccgttccacaatataagtcattctagcatttttcacattcatattgat 103
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| || |||||||| ||| || ||||| |||||||||| |||||||||| ||||
Sbjct: 92 gattcattaatatcaatatgaatgtgaaaaatgctagaatgac-ttatattgtggaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 84 atga 87
||||
Sbjct: 89 atga 86
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 83 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 141
Query: 146 aggaagta 153
||| ||||
Sbjct: 142 agggagta 149
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||| |||||| ||| |||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 84 atga 87
||||
Sbjct: 92 atga 89
Score = 65.9 bits (33), Expect = 2e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgt 81
||||||||| ||||||||||||||||||||| ||| ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||| ||| |||||||| |||||||||| ||| ||||||||||| ||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgac-ttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 89 tcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaagg 148
|||| ||||||||||| ||| ||||||| ||||||||| |||| ||||||||||| |||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatga-cttacattgtgaaacggagg 147
Query: 149 aagta 153
||||
Sbjct: 148 gagta 152
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||| ||||| || |||||||||| |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 84 atga 87
||||
Sbjct: 97 atga 94
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||| ||||||||||||| |||| |||||||| |||| |||||||||||
Sbjct: 91 gattcattaacattaatataaatatgggaaatgttagaatga-cttacattgtgaaacgg 149
Query: 146 aggaagta 153
||| ||||
Sbjct: 150 agggagta 157
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||| ||||||| || |||| |||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 84 atga 87
||||
Sbjct: 96 atga 93
Score = 60.0 bits (30), Expect = 1e-08
Identities = 53/59 (89%), Gaps = 3/59 (5%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||||||| ||||||||| |||||||||||||||||| | |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtt 61
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||||| |||| || |||||| |||| |||||||||||
Sbjct: 90 gattcattaacatcaatatgaatatgggaaatgcttgaatga-cttacattgtgaaacgg 148
Query: 146 aggaagta 153
||| ||||
Sbjct: 149 agggagta 156
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||| |||||||| || |||| |||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 84 atga 87
||||
Sbjct: 89 atga 86
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||||| |||| ||| ||||| ||||||||||||||||
Sbjct: 83 gattcattaacatcaatatgaatatgggaaatgctaaaatga-cttatattgtgaaacgg 141
Query: 146 aggaagta 153
||| ||||
Sbjct: 142 agggagta 149
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 84 atga 87
||||
Sbjct: 98 atga 95
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
|||||||||||||| |||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 92 gattcatcaacatctatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 150
Query: 146 aggaagtat 154
||| |||||
Sbjct: 151 agggagtat 159
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||||||| |||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 84 atga 87
||||
Sbjct: 61 atga 58
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaag 147
||||| ||||||| ||||||| ||| |||| |||||||||| ||| ||||||||||| ||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgac-ttagattgtgaaacggag 115
Query: 148 gaagtatat 156
| |||||||
Sbjct: 116 ggagtatat 124
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||| |||| ||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 84 atga 87
||||
Sbjct: 98 atga 95
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||| | |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatataggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| | |||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatga 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| ||||||||||| ||| |||| || ||||||||| |||| ||||||||||| |
Sbjct: 93 attcattaacatcaatatgaatgcggaatatgctagaatga-cttacattgtgaaacgga 151
Query: 147 ggaagtat 154
|| |||||
Sbjct: 152 gggagtat 159
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| ||||||||||| ||| ||| ||||| |||||||| |||| ||||||||||| |
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatga-cttacattgtgaaacgga 151
Query: 147 ggaagta 153
|||||||
Sbjct: 152 ggaagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||| |||| || ||| ||||||||||| ||||
Sbjct: 147 tttcacaatgtaagtcattctaatatttcccacattcatattgatgttaatga 95
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| |||||||||||||| || ||||| ||||||||| |||| ||||||||||| |
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatga-cttacattgtgaaacgga 124
Query: 147 ggaagtatat 156
||||||||||
Sbjct: 125 ggaagtatat 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||||||||||||| | |||||||||||||| ||||
Sbjct: 120 tttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaatga 68
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 111/133 (83%), Gaps = 7/133 (5%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| |||||||||||| |||||||| ||| |||| || ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat--atattc 62
Query: 84 at---gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtga 140
|| ||||||| ||||| ||||| |||||||||||| |||||| || |||| |||||||
Sbjct: 63 atctagattcattaacattaatatgaatatggaaaatgctagaagga-cttacattgtga 121
Query: 141 aacgaaggaagta 153
|||| ||||||||
Sbjct: 122 aacggaggaagta 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||| |||||||||||||| |||| ||||| ||||| ||||
Sbjct: 123 tttcacaatgtaagtccttctagcattttccatattcatattaatgttaatga 71
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtatat 156
|||||||||||| || ||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatga-cttgcattgtgaaacggaggaagtatat 111
Query: 157 a 157
|
Sbjct: 112 a 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||| |||||||||||| ||||| | ||||||||||||
Sbjct: 97 tttcacaatgcaagtcattctagtatttttcacatttatattgat 53
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattcta 56
|||||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 111/135 (82%), Gaps = 7/135 (5%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| |||||||||||||||||| || ||| ||||||||| |
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 84 at-----gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgt 138
|| ||||||| | ||||||||| ||| ||| |||| ||||||||| |||| |||||
Sbjct: 78 atgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatga-cttacattgt 20
Query: 139 gaaacgaaggaagta 153
|||||| ||| ||||
Sbjct: 19 gaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 111/135 (82%), Gaps = 7/135 (5%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 84 at-----gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgt 138
|| ||||||| | ||||||||| ||| ||| |||| ||||||||| |||| ||| |
Sbjct: 65 atgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatga-cttacattat 123
Query: 139 gaaacgaaggaagta 153
|||||| ||| ||||
Sbjct: 124 gaaacggagggagta 138
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 110/133 (82%), Gaps = 5/133 (3%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| ||||||||||||| |||| || |||| ||||||||| |
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 84 atgattc---atcaacatcaatataaatatggaaaatactagaatgaccttatattgtga 140
|||| || | | ||||||||| |||||| |||||||||||| | |||| |||||||
Sbjct: 76 atgaatctagactagcatcaatatgaatatgagaaatactagaatta-cttacattgtga 18
Query: 141 aacgaaggaagta 153
|||| ||||||||
Sbjct: 17 aacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 100/122 (81%), Gaps = 4/122 (3%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgat---gattca 91
||||||||| ||||| ||||||| |||| | |||| ||||||||| | | ||||||
Sbjct: 16 tttcacaatgtaagtaattctagtatttctcatattcatattgatgctagtctagattca 75
Query: 92 tcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaag 151
| | ||||||||| ||||||| |||||||||||||| |||| ||| ||||||| ||| ||
Sbjct: 76 ttagcatcaatatgaatatgggaaatactagaatga-cttacattatgaaacggagggag 134
Query: 152 ta 153
||
Sbjct: 135 ta 136
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||| ||| ||| ||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 60 atcaatatgaatgtgggaaatactagaatgac-ttatattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||| ||||||||||||| |||| || ||| ||||||||
Sbjct: 16 tttcacaatataagtcattctagtatttcccacattcatattgat 60
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgt 81
||||||||| |||||||||||||||||| || |||| ||||||||||
Sbjct: 131 tttcacaatgtaagtcattctagcatttcccatattcatattgatgt 85
Score = 63.9 bits (32), Expect = 7e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||||| ||||||| |||| |||||||||| ||| ||||||||||| |||||||||
Sbjct: 85 acatcaatatgaatatgggaaatgctagaatgac-ttacattgtgaaacggaggaagtat 143
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||| ||| |||||||| ||||| ||| |||||| |||||||||||||||
Sbjct: 71 gattcattaacattaatgtaaatatgaaaaatgctaaaatgac-ttatattgtgaaacgg 13
Query: 146 aggaagtatata 157
| ||||||||||
Sbjct: 12 aagaagtatata 1
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| |||||||| ||||||||| |||| ||| |||||||
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatga-cttacattatgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||| ||| ||||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgttaatga 68
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| | ||| ||||||||||| ||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatga 86
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttcc 65
||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctagcattttcc 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatt 70
|||||||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatatt 51
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| |||||||| ||||||||| |||| ||| |||||||
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatga-cttacattatgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||| ||| ||||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcatattgatgttaatga 68
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 135 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
||||| ||||||||||| ||| ||| |||| ||||||||| |||| ||||||||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaac 136
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||| | |||| ||||||||| ||||||||||| ||||
Sbjct: 80 gattcattaacatcaatatgaatatagtaaatgctagaatga-cttatattgtggaacgg 138
Query: 146 aggaagta 153
||||||||
Sbjct: 139 aggaagta 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 38 cacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
|||||| |||||||||||||||||| | |||| ||||||||||| ||||
Sbjct: 132 cacaatataagtcattctagcatttactatattcatattgatgttaatga 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 54/64 (84%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| ||||||||| || ||||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 63.9 bits (32), Expect = 7e-10
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgt 81
|||||||||| ||||||||| ||| ||||||||||||||| | ||||| |||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 58.0 bits (29), Expect = 4e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 113 aaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 44 aaaatactagaatgac-ttatattgtgaaacgaagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
||||||||| ||||||| ||||| ||||||||| ||| ||||||||||| ||| |||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgat-ttacattgtgaaacggagggagtat 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcatttt 63
||||||||| ||||||||||||| |||||
Sbjct: 16 tttcacaatataagtcattctagtatttt 44
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatg 80
||||||||| |||||||||||||||||| || |||| |||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 96 catcaatataaatatggaaaatactagaatgaccttatattgtgaaacg 144
||||||||| ||||||| |||| |||||||||| |||||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgac-ttatattgtgaaacg 14
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 100 aatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||| ||| ||| |||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgac-ttatattgtgaaacggaggaagta 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 108 tttcacaatataagtcattctagcattt 81
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||||| | |||| ||||||||| ||||||||||| ||||
Sbjct: 71 gattcattaacatcaatatgaatatagtaaatgctagaatga-cttatattgtggaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 38 cacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
|||||| |||||||||||||||||| | |||| ||||||||||| ||||
Sbjct: 19 cacaatataagtcattctagcatttactatattcatattgatgttaatga 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 54/64 (84%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| ||||||||| || ||||| || ||| |||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 84 atga 87
||||
Sbjct: 86 atga 83
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 63.9 bits (32), Expect = 7e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||||| ||| |||||||||||| ||||| |||| ||||||||||| ||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatactaaaatga-cttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||| ||||||||| ||| ||||||| ||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagtattttccacattcatattgatgtt 63
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| || |||||||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatggatgtggaaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatccatattgatgttaatga 68
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||| |||||| ||| ||| |||||||||||||| |||| |||||||||||
Sbjct: 92 gattcattaacaacaatatgaatgtgggaaatactagaatga-cttacattgtgaaacgg 150
Query: 146 aggaagtatat 156
||| |||||||
Sbjct: 151 agggagtatat 161
Score = 52.0 bits (26), Expect = 3e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||| |||| || ||| |||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 84 atga 87
||||
Sbjct: 98 atga 95
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| || |||| |||||||||| |||||||||||||||
Sbjct: 61 gattcattaacatcaatatgaatgtgagaaatgctagaatgac-ttatattgtgaaacgg 119
Query: 146 aggaagta 153
||||||||
Sbjct: 120 aggaagta 127
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| | ||| ||||||||||| ||||
Sbjct: 116 tttcacaatataagtcattctagcatttctcacattcatattgatgttaatga 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 61.9 bits (31), Expect = 3e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||||| ||||||||| ||| ||||| ||||||||| | |||||||||||||
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgat 51
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 61.9 bits (31), Expect = 3e-09
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||| |||||||||||||||||| || |||| ||||||||
Sbjct: 126 tttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||| ||||||| |||| |||||||||| ||| ||||||||||| ||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgac-ttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||||| ||||||||| |||||||||||||||||| || ||| ||||||||
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 103
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||| ||||| ||| ||||||| ||||||||| |||||||||||||||
Sbjct: 71 gattcattaacattaatatgaatgtggaaaaagttagaatgac-ttatattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| || |||||||| ||| ||| |||| |||||||||| |||||||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaatgctagaatgac-ttatattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||| | |||||| ||| ||||| ||||| ||||
Sbjct: 16 tttcacaatataagtcattctaactttttccacattcatattaatgttaatga 68
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttcc 65
|||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttcc 117
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| |||||||||||| ||||||| |||| |||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| | |||| |||| ||| |||||||| |||||||||| ||| ||||||||||| |
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgac-ttacattgtgaaacgga 151
Query: 147 ggaagtat 154
|| |||||
Sbjct: 152 gggagtat 159
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 aggtagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcatttt 63
||||||||| |||||||||||||||||||
Sbjct: 129 tttcacaatgtaagtcattctagcatttt 101
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 61.9 bits (31), Expect = 3e-09
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||| ||||||||||||| || ||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgtt 63
Query: 83 gatga 87
||||
Sbjct: 64 catga 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 133 tttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| ||||||||||| ||| ||| |||| |||||||| |||| ||||||||||| |
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatg-gcttacattgtgaaacgga 12
Query: 147 ggaagta 153
|| ||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttcc 65
|||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttcc 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||| | |||| ||| |||||||| |||||||||| ||| |||||||||||
Sbjct: 92 gattcattaacacctatatgaatgtggaaaatgctagaatgac-ttacattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 61.9 bits (31), Expect = 3e-09
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||| ||| |||||||||||||||||| | |||| |||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtt 63
Query: 83 gatga 87
||||
Sbjct: 64 aatga 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| |||||| |||| ||||||||| |||| ||| |||||||
Sbjct: 71 gattcattaacatcaatatgaatatgagaaatgctagaatga-cttacattatgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| ||||||||||| ||| | |||||| ||||||||| |||| |||||| |||| |
Sbjct: 70 attcattaacatcaatatgaatgtagaaaatgctagaatga-cttacattgtggaacgga 12
Query: 147 ggaagtatata 157
|||||||||||
Sbjct: 11 ggaagtatata 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcctttc-acaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||| ||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 98
Query: 83 gatga 87
||||
Sbjct: 97 aatga 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 38 cacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
|||||| |||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgttaatga 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| ||| |||| ||||||||| |||| |||||| ||||
Sbjct: 90 gattcattaacatcaatatgaatgtgggaaatgctagaatga-cttacattgtggaacgg 148
Query: 146 aggaagta 153
||| ||||
Sbjct: 149 agggagta 156
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 112/135 (82%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatatt---gatg 80
|||||||||| ||||||||| |||||||||||||||||| || ||| ||||| |||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatattatatatg 64
Query: 81 ttgatgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtga 140
| | ||||||| || || ||||| ||| ||| |||| ||||||||| |||| |||||||
Sbjct: 65 tcta-gattcattaatataaatatgaatgtgggaaatgctagaatga-cttacattgtga 122
Query: 141 aacgaaggaagtata 155
|||| ||||||||||
Sbjct: 123 aacggaggaagtata 137
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 124 tttcacaatgtaagtcattctagcattt 97
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| |||| |||||||||||||| | |||||||||||||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatg 102
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||||||| || ||||| |||||||| ||||||||||||||||
Sbjct: 92 gattcattatcatcaatataaatgtgaaaaatgctagaatg-gcttatattgtgaaacgg 150
Query: 146 aggaagtata 155
||| ||||||
Sbjct: 151 agggagtata 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||| ||||| ||| ||| |||| ||| |||||| |||||||||||||||
Sbjct: 71 gattcattaacataaatatgaatgtgggaaatgctacaatgac-ttatattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatt 70
||||||||| ||||||||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatatt 51
Score = 58.0 bits (29), Expect = 4e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 106 aatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||||||| ||||||||| |||| ||||||||||| |||||||||
Sbjct: 51 aatatggaaaatgctagaatga-cttacattgtgaaacggaggaagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| |||||||||||||||||| | ||| |||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 84 atga 87
||||
Sbjct: 63 atga 60
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcatttt 63
||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttt 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| ||||| | ||| ||| ||| |||| | |||||||| ||||||||||||||| |
Sbjct: 70 attcattaacatgagtatgaatgtgggaaatgccagaatgac-ttatattgtgaaacgga 12
Query: 147 ggaagtat 154
||||||||
Sbjct: 11 ggaagtat 4
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattga 78
||||||||||| ||||||||| |||||||||||||||||| || ||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 48.1 bits (24), Expect = 4e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcatt 61
||||||||| |||||||||||||||||
Sbjct: 93 tttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| ||||| ||||||||||||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| ||||| ||||||||||||||| ||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||| ||| |||||||| ||||||| || ||| ||||||||||| ||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataac-ttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 50.1 bits (25), Expect = 1e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||| |||||| ||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattaacaacaatatgaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagtat 154
||| |||||
Sbjct: 12 agggagtat 4
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcattt 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||||| |||| ||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttc 64
|||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttc 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||| ||||| | ||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatga 68
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| ||||| ||||||||||||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 54.0 bits (27), Expect = 7e-07
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| ||||| |||||||||||| || ||| ||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||| ||| |||||||| ||||||| || ||| ||||||||||| ||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataac-ttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||||||||| || |||| |||||||||| ||||||||| ||||| |||||||||
Sbjct: 36 acatcaatataaatgtgagaaatgctagaatgac-ttatattgtaaaacggaggaagtat 94
Query: 155 at 156
||
Sbjct: 95 at 96
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 39 acaatntaagtcattctagcattttccntatttatattgatgt 81
||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 78 acaatataagtcattctagcatttctcacatttatattgatgt 36
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 109/131 (83%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| |||||||||||||||||| | ||| ||||| |||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt--tgtct 73
Query: 84 atgattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
| ||||||| ||||||||||| ||| || |||||||||||||| |||| ||| ||||||
Sbjct: 72 a-gattcattaacatcaatatgaatgtgagaaatactagaatga-cttacattatgaaac 15
Query: 144 gaaggaagtat 154
| |||||||||
Sbjct: 14 ggaggaagtat 4
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 60.0 bits (30), Expect = 1e-08
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| ||| |||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 84 atga 87
||||
Sbjct: 102 atga 99
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||| ||| ||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 96 gattcattaacatcactatgaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 154
Query: 146 aggaagta 153
||| ||||
Sbjct: 155 agggagta 162
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| |||||||||||||||||| || ||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| |||||||||||| |||||||| ||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgat 103
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||| ||| ||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattaacatcactatgaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| || |||||||| ||| |||||||| ||||||||| ||| |||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtggaaaatgttagaatgac-ttacattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 60.0 bits (30), Expect = 1e-08
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatat 75
|||||||||| ||||||||| |||||||||||||||||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttata 74
|||||||||| ||||||||| |||||||||||||||||| || |||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 54.0 bits (27), Expect = 7e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatat 75
||||||||| |||||||||||||||||| || ||||||||
Sbjct: 95 tttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 101 atataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtatata 157
|||||||| ||| |||| |||||||||| ||| ||||||||||| ||| ||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgac-ttacattgtgaaacggagggagtatata 1
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| |||||||||||||||||| || ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtatat 156
|||||||| ||| ||| |||| |||||||||| ||||||||||||||| ||| |||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgac-ttatattgtgaaacggagggagtatat 2
Query: 157 a 157
|
Sbjct: 1 a 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattga 78
||||||||| |||||||||||||||||| || ||| |||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 84 atga 87
||||
Sbjct: 98 atga 95
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||| ||||| ||| |||| ||| |||||||||| ||| |||||||||||
Sbjct: 92 gattcattaacattaatatgaatgtggagaatgctagaatgac-ttacattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattt 62
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcatt 61
|||||||||| ||||||||| ||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattt 62
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 115 tttcacaatgtaagtcattctagcattt 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| || |||||||| ||| | | |||| |||||||||| ||| ||||||||||| |
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgac-ttacattgtgaaacgga 119
Query: 147 ggaagta 153
|||||||
Sbjct: 120 ggaagta 126
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 110 tggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||||||||||||||| |||| ||||||||||| |||||||||
Sbjct: 47 tggaaaatactagaatga-cttacattgtgaaacggaggaagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttcc 65
||||||||| ||||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagtattttcc 46
Score = 48.1 bits (24), Expect = 4e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 114 aaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 101 aaatcctagaatgac-ttatattgtgaaacggaggaagta 139
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattt 62
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| ||||||||||| ||| | | |||| ||||||||| |||| ||||||||||| |
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatga-cttacattgtgaaacgga 107
Query: 147 ggaagta 153
|||||||
Sbjct: 108 ggaagta 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| | ||| ||||||||||| ||||
Sbjct: 103 tttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatga 51
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttat 73
||||||||| |||||||||||||||||||| |||||||
Sbjct: 78 tttcacaatataagtcattctagcattttctatatttat 40
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 103 ataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||| |||||| |||||||||| ||||||||||||||| || |||||
Sbjct: 40 ataaatatagaaaatgctagaatgac-ttatattgtgaaacggagtaagta 89
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||||||| ||| |||| | | ||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatataaatgtgggaaatgcaaaaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||| | |||||| || ||||||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaatga 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 25 tactccctcctt-tcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| | ||||||| |||||||||||||||||| || ||| ||||||||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgat 103
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 112/138 (81%), Gaps = 7/138 (5%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| ||||||||| |||||||| || ||| ||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgtca 79
Query: 84 at-----gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgt 138
| ||||||| | ||||| ||| ||| |||||||| |||||||||| ||||||| |
Sbjct: 78 ctatctagattcattagcatcagtatgaatgtggaaaatgctagaatgac-ttatattat 20
Query: 139 gaaacgaaggaagtatat 156
||||| |||||||||||
Sbjct: 19 gaaacagaggaagtatat 2
Score = 48.1 bits (24), Expect = 4e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttcc 65
||||| ||| |||||||||||||||||||||
Sbjct: 16 tttcataatataagtcattctagcattttcc 46
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||| ||||||| ||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattaacgtcaatatgaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||||||||| || ||| ||||||| ||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgacgttaatga 68
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttcc 65
||||||||| |||||||||||||||||||||
Sbjct: 97 tttcacaatgtaagtcattctagcattttcc 67
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 101 atataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
|||||| | |||||||| |||||||||| ||| ||||||||||| |||||||||
Sbjct: 57 atataattgtggaaaatgctagaatgac-ttacattgtgaaacggaggaagtat 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattt 62
||||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| || |||||||| ||| || ||||||||||||||| |||| |||||||||||
Sbjct: 92 gattcattaaaatcaatatgaatgtgaaaaatactagaatga-cttacattgtgaaacgg 150
Query: 146 aggaagta 153
||| ||||
Sbjct: 151 agggagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||||| ||||||||| |||||||||||| ||||| || ||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgat 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
|||||||||| ||||||||| ||||||||||||| ||||| | ||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgat 103
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||||| |||| ||||||| ||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattaacatccatatgaatatgggtaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattt 120
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||||||||||| || |||| |||| |||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctagcattacccatattcatatggatgttaatga 68
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgt 81
|||||||||| ||||| ||| |||||||||||||||||| || ||| ||||||||||
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgt 95
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||||||||| ||| ||| |||| ||||||||| ||| |||||||||||
Sbjct: 71 gattcattgacatcaatatgaatgtgggaaatgatagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagtata 155
||||||||||
Sbjct: 12 aggaagtata 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgt 81
||||||||| |||||||||||| ||||| || ||| ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatattgatgt 62
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| |||||||||||| | || ||||| ||||||||| |||| |||||||||||
Sbjct: 64 gattcattaacatcaatatatacgtgaaaaatgctagaatga-cttacattgtgaaacgg 122
Query: 146 aggaagta 153
||||||||
Sbjct: 123 aggaagta 130
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||||||||||||| | | |||||||||||| ||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaatga 67
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||| ||| ||| |||| |||||||||| ||| |||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatg 80
||||||||| |||||||||||||||||| || ||| |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcattt 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||| ||| | | |||| |||||||||| |||||||||||||||
Sbjct: 86 gattcattagcatcaatatgaatgtaggaaatgctagaatgac-ttatattgtgaaacgg 144
Query: 146 aggaagta 153
||| ||||
Sbjct: 145 agggagta 152
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 100/123 (81%), Gaps = 5/123 (4%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgattcatc- 93
||||||||| |||||||||||||||||| | ||| |||||||| || |||| || |
Sbjct: 16 tttcacaatataagtcattctagcatttctcatatagatattgatattaatgaatctaca 75
Query: 94 ---aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaa 150
|||||||| || ||| || ||||| ||| ||||| |||||||||||||||| |||||
Sbjct: 76 tataacatcaacatgaatgtgaaaaatgctaaaatga-cttatattgtgaaacggaggaa 134
Query: 151 gta 153
|||
Sbjct: 135 gta 137
Score = 54.0 bits (27), Expect = 7e-07
Identities = 93/114 (81%), Gaps = 5/114 (4%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt----gatgattc 90
||||||||| ||||||||| ||||||||| | ||| || |||||||| | |||||
Sbjct: 126 tttcacaatataagtcattttagcatttttcacattcatgttgatgttatatgtagattc 67
Query: 91 atcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacg 144
|| || |||||||| ||||| |||| |||||||||| |||||||||||||||
Sbjct: 66 attaatatcaatatctatatgagaaatgctagaatgac-ttatattgtgaaacg 14
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||| ||||| ||| ||| |||| ||| |||||| |||||||||||||||
Sbjct: 92 gattcattaacattaatatgaatgtgggaaatgctaaaatgac-ttatattgtgaaacgg 150
Query: 146 aggaagta 153
||||||||
Sbjct: 151 aggaagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||||||| ||||||||| ||||||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 98 tcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||| ||| ||| |||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgac-ttatattgtgaaacggaggaagta 114
Score = 52.0 bits (26), Expect = 3e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattga 78
||||||||| |||||||||||||||||| || ||| |||||||
Sbjct: 103 tttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 50.1 bits (25), Expect = 1e-05
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtatat 156
|||||||| ||| |||||| | |||||||||| ||||||||||||||| ||| |||||||
Sbjct: 59 atcaatatgaatgtggaaa-tgctagaatgac-ttatattgtgaaacggagggagtatat 2
Query: 157 a 157
|
Sbjct: 1 a 1
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||||||| ||| |||| ||| ||||| |||| ||||||||||
Sbjct: 92 gattcattaacatcaatataaatgtgggaaatgctaaaatga-cttactttgtgaaacgg 150
Query: 146 aggaagta 153
||||||||
Sbjct: 151 aggaagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
|||||||| ||||||||| |||||||| || ||||||||||||||| ||||
Sbjct: 147 tttcacaaagtaagtcattttagcatttcccacatttatattgatgttaatga 95
Score = 52.0 bits (26), Expect = 3e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| |||||||| ||||||||| | |||||| || |||||||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 84 atga 87
||||
Sbjct: 65 atga 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||||||| ||| |||| | | ||||| |||| ||||||||||
Sbjct: 71 gattcataaacatcaatataaatgtgggaaatgcaaaaatga-cttactttgtgaaacgg 13
Query: 146 aggaagtatata 157
||| ||||||||
Sbjct: 12 agggagtatata 1
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| ||||| ||||||||||||| | ||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatg 61
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| ||| ||||| |||||||||| |||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatg 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||| ||| || ||||| ||||||| || ||| |||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgaaaaatgctagaataac-ttacattgtgaaacgg 13
Query: 146 aggaagtatat 156
||| |||||||
Sbjct: 12 agggagtatat 2
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||||| ||||||||| |||||||||||| ||||| || ||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgat 60
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattt 120
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttcc 65
|||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttcc 46
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 54.0 bits (27), Expect = 7e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttc 64
||||||||| ||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttc 45
Score = 54.0 bits (27), Expect = 7e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttc 64
||||||||| ||||||||||||||||||||
Sbjct: 101 tttcacaatgtaagtcattctagcattttc 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 87 attcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaa 146
|||||| ||||||||||| || || ||||| |||||||||| ||| ||||||||||| |
Sbjct: 69 attcattaacatcaatatggatgtg-aaaatgctagaatgac-ttacattgtgaaacgga 12
Query: 147 ggaagta 153
|||||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttcc 65
|||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttcc 46
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| |||||||||||| ||||| || ||| ||||||||||| ||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatga 68
Score = 54.0 bits (27), Expect = 7e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttc 64
||||||||| ||||||||||||||||||||
Sbjct: 132 tttcacaatgtaagtcattctagcattttc 103
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacg 144
||||||| ||||||||||| ||| ||| |||| |||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgttagaatga-cttacattgtgaaacg 14
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttcc 65
|||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttcc 46
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatga 87
||||||||| ||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 16 tttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatga 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 88 ttcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaag 147
||||| ||||||||||| ||| ||| |||| ||||||||| ||| ||||||||||| ||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatga-cttgcattgtgaaacggag 11
Query: 148 gaagta 153
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatg 80
|||||||||| ||||||||| |||||||||||| ||||| || ||| |||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatg 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 97 atcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||| ||| || |||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgac-ttatattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||| ||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 118 tttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||||| ||| ||| |||| ||||||||| |||| ||| ||||||| ||||||||
Sbjct: 71 aacatcaatatgaatgtgggaaatgctagaatga-cttacattatgaaacggaggaagta 129
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttc 64
|||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttc 45
Score = 50.1 bits (25), Expect = 1e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| || |||||||| ||| ||| ||||||||||||| |||| |||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaatactagaatg-tcttacattgtgaaacgg 150
Query: 146 aggaagtat 154
||| |||||
Sbjct: 151 agggagtat 159
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| || |||||||||||||||| |||| |||||||||||
Sbjct: 71 gattcattaacatcaatatttctagtgaaaatactagaatga-cttacattgtgaaacgg 13
Query: 146 aggaagta 153
||| ||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| ||||| ||| ||||||||||||||||| || |||| |||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 84 atga 87
||||
Sbjct: 98 atga 95
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgttg 83
|||||||||| |||||| || ||||||| |||| |||||||| ||| |||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 84 atga 87
||||
Sbjct: 70 atga 67
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcat 60
|||||||||| ||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
Score = 46.1 bits (23), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||| ||| |||||||||||||||||| || ||| ||||||||
Sbjct: 104 tttcataatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||| |||||||||||||||||| | ||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacatttatattaatgtt 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||| ||||||||| || |||| |||||||||| ||| ||||||||||| ||||||||
Sbjct: 63 aacattaatataaatgtgagaaatgctagaatgac-ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||| |||||||| |||||||| || |||| |||||||||||
Sbjct: 125 tttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||||||||| ||||||| |||| ||| ||||| ||| ||||||||||| ||||||||
Sbjct: 78 aacatcaatatgaatatgggaaatgctaaaatga-cttgcattgtgaaacggaggaagta 136
Query: 154 t 154
|
Sbjct: 137 t 137
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 127 tttcacaatgtaagtcattctagcattt 100
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 78 tttcacaatgtaagtcattctagcattt 51
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 116 atactagaatgaccttatattgtgaaacgaaggaagtat 154
||||||||||||| ||| ||||||||||| |||||||||
Sbjct: 41 atactagaatgac-ttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 114 aaatactagaatgaccttatattgtgaaacgaaggaagtata 155
|||| |||||||||| ||| ||||||||||| ||||||||||
Sbjct: 43 aaatgctagaatgac-ttacattgtgaaacggaggaagtata 3
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattt 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcat 60
||||||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcatttt 63
|||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttt 92
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagc 58
||||||||||| ||||||||| ||||||||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagc 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 38 cacaatntaagtcattctagcattt 62
|||||| ||||||||||||||||||
Sbjct: 19 cacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||||||| ||||| ||| |||||||||||||||||| | |||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcattt 92
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 100 aatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtata 155
||||| ||| ||| |||| |||||||||| ||| ||||||||||| ||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgac-ttacattgtgaaacggaggaagtata 132
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
|||||||||| ||||||||| ||||| |||||||||||| || ||| | |||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtt 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 115 tttcacaatgtaagtcattctagcattt 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 114 aaatactagaatgaccttatattgtgaaacgaaggaagtatat 156
|||| |||||||||| ||| ||||||||||| |||||||||||
Sbjct: 88 aaatgctagaatgac-ttacattgtgaaacggaggaagtatat 129
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 84 tttcacaatgtaagtcattctagcattt 57
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattt 62
||||||||||| ||||||||| ||| ||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaactcattctagcattt 43
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattt 62
||||||||| ||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||| ||| || |||| |||||||||| ||| ||||||||||| ||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgac-ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgttgatgat 88
||||| ||| ||||||||| ||||| ||||| ||| ||||||||||| |||||
Sbjct: 16 tttcataatgtaagtcattttagcactttccacattcatattgatgttaatgat 69
Score = 46.1 bits (23), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgat 79
||||||||| ||||||||||||||| || || ||| ||||||||
Sbjct: 112 tttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||| ||| ||| |||| ||| |||||| ||| |||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctaaaatgac-ttacattgtgaaacgg 13
Query: 146 aggaagta 153
||||||||
Sbjct: 12 aggaagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcattt 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 120 tagaatgaccttatattgtgaaacgaaggaagta 153
||||||||| ||||||| ||||||||||||||||
Sbjct: 37 tagaatgac-ttatattatgaaacgaaggaagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 26 actccctcc-tttcacaatntaagtcattctagcattt 62
||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcattt 120
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcatt 61
||||||||||| ||||| ||| |||||||||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 48.1 bits (24), Expect = 4e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttcc 65
||||||||| ||||||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcactttcc 46
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| | ||||||||| ||| ||| |||| ||| |||||| ||| |||||||||||
Sbjct: 77 gattcattagcatcaatatgaatgtgggaaatgctaaaatgac-ttacattgtgaaacgg 135
Query: 146 aggaagta 153
||||||||
Sbjct: 136 aggaagta 143
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcattt 62
|||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 96 catcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagtat 154
||||||||| ||| || |||||||||||||| |||| ||||||||||| ||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatga-cttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacga 145
||||||| ||||||||||| ||| || |||||||| ||||| |||| |||||||||||
Sbjct: 81 gattcattaacatcaatatgaatgtgagaaatactaaaatga-cttacattgtgaaacgg 139
Query: 146 aggaagta 153
||| ||||
Sbjct: 140 agggagta 147
Score = 46.1 bits (23), Expect = 2e-04
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| ||||||||| ||| |||| | ||| |||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 83 gatga 87
||||
Sbjct: 88 aatga 84
Score = 44.1 bits (22), Expect = 6e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 94 aacatcaatataaatatggaaaatactagaatgaccttatattgtgaaac 143
||||||||||||||| || |||||||| ||||| |||| ||||||||||
Sbjct: 63 aacatcaatataaatgtgacaaatactaaaatga-cttacattgtgaaac 15
Score = 44.1 bits (22), Expect = 6e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||| ||||||||| ||| |||| | |||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagtatttgtcacatttatattgatgtt 63
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaa 124
||||||| |||||| ||||||||||||| ||| ||||||
Sbjct: 71 gattcattaacatctatataaatatggacaatgctagaa 109
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 95 acatcaatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
|||||||||| ||| || ||||||||| |||||| ||| ||||||||||| ||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgac-ttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcatt 61
|||||||||| ||||| ||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgaccttatattgtgaaacg 144
||||||| |||||| | |||||| |||| |||||||||| | ||||| |||||||||||
Sbjct: 52 gattcattaacatctaaataaatgtggacaatactagaaag-ccttacattgtgaaacg 109
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcatt 61
|||||||||| ||||| ||| |||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 24 gtactccctcc-tttcacaatntaagtcattctagcattttccntatttatattgatgtt 82
||||||||||| ||||||||| |||| | |||||||||| ||| ||| |||| ||||||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtt 100
Query: 83 gatga 87
||||
Sbjct: 99 aatga 95
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgac 128
||||||| ||||||||||| ||| ||| |||| ||||||||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaatgac 108
Score = 46.1 bits (23), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 46 aagtcattctagcattttccntatttatattgatgttgatga 87
||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatga 69
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 25 tactccctcc-tttcacaatntaagtcattctagcatt 61
|||||||||| ||||| ||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 25 tactccctcc-tttcacaatntaagtcattctag 57
|||||||||| ||||||||| |||||||||||||
Sbjct: 156 tactccctccgtttcacaatataagtcattctag 123
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 46 aagtcattctagcattttccntatttatattgatgttgatga 87
||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatga 42
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgac 128
||||||| ||||||||||| ||| ||| |||| ||||||||||
Sbjct: 45 gattcattaacatcaatatgaatgtgggaaatgctagaatgac 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 86 gattcatcaacatcaatataaatatggaaaatactagaatgac 128
||||||| ||||||||||| ||| ||| |||| ||||||||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaatgac 108
Score = 46.1 bits (23), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 46 aagtcattctagcattttccntatttatattgatgttgatga 87
||||||||||||||||| || ||| ||||||||||| ||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatga 69
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 100 aatataaatatggaaaatactagaatgaccttatattgtgaaacgaaggaagta 153
||||| ||| ||| |||||||| |||||| ||| ||||||||||| ||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgac-ttacattgtgaaacggaggaagta 109
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 44.1 bits (22), Expect = 6e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 46 aagtcattctagcattttccntatttatattgatgtt 82
||||||||||||||||| || ||| |||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgtt 37
Score = 44.1 bits (22), Expect = 6e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 46 aagtcattctagcattttccntatttatattgatgtt 82
||||||||||||||||| || ||| |||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgtt 87
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 129 cttatattgtgaaacgaaggaagtat 154
|||||||||||||||| |||||||||
Sbjct: 29 cttatattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 129 cttatattgtgaaacgaaggaagtat 154
|||||||||||||||| |||||||||
Sbjct: 112 cttatattgtgaaacggaggaagtat 137
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 44.1 bits (22), Expect = 6e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 35 tttcacaatntaagtcattctagcatttt 63
||||| ||| |||||||||||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttt 44
