miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 74 atgaatctaa--acatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||||| | |||||| | | || |||| | || | |||||||||| |||| |||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 133/158 (84%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata 70
||||||||||| ||||||||||| |||||||||||||||||| |||||| ||||| |
Sbjct: 2 atctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtg 61
Query: 71 ttaatgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatgggga 128
|||||||||||| || ||||||||||||| |||| | ||||||||||| ||| || |
Sbjct: 62 ttaatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaa 121
Query: 129 atactaaaatgacttacattgggaaacggaggaagtac 166
|| ||| ||||||||| |||| | |||||||| |||||
Sbjct: 122 atgctagaatgacttatattgtggaacggagggagtac 159
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 135/156 (86%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||||||||||| | |||||||||||| || ||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtt 100
Query: 73 aatgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| |||||||| |||| || |||| | || | ||||| ||| |||| |||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||||||| ||||||||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| |||||||| |||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | |||||| | | || |||| | || || ||||| ||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 134/155 (86%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 74 atgaatctaaacatatatct--atttaaattcctcaatatcaatataaatatggggaata 131
||||||||| |||||||| | | || |||| | || ||| |||| |||||||| |||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
||| |||||||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||||||||||| || |||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 9e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||| ||| || |||| | || |||||||| ||| |||| |||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 73 aatgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaat 130
||||||||| | | |||||| | | || |||| | || |||||||| ||||||| |||
Sbjct: 99 aatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagtac 166
||| |||||||||||||| |||||||||| |||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 129 bits (65), Expect = 1e-29
Identities = 132/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 74 atgaatctaaacatatatctat-ttaaattcctcaatatcaatataaatatggggaatac 132
|||||||||||||||| | | | || |||| | || |||||||| ||| |||| ||| |
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 133 taaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatcta-aacatatatctatttaaattcctcaatatcaatataaatatggggaatac 132
||||||||| ||||| || | |||| |||| | || |||||||| ||| |||| ||| |
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 133 taaaatgacttacattgggaaacggaggaagtact 167
|| |||||||||||||| |||||||||| ||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagtact 159
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||| ||||||| |||||||||||||||||| |||||||||||| |||||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 73 aatgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaat 130
||||||||| | | |||||| | | || |||| | || |||||||||||| |||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagtac 166
| |||||||||||||||| ||||||||||||||||
Sbjct: 39 gcaaaaatgacttacattgtgaaacggaggaagtac 4
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| | |||||| |||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | ||||||||||| ||| |||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| || ||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 6e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||||||||| |||||||||| | || ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 73 aatgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| || ||||||||||||| |||| | ||||||||||| ||| ||| |||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaat 123
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||| ||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 74 atgaatctaaacatatatctattt--aaattcctcaatatcaatataaatatggggaata 131
||||||||||| | |||| ||| | | |||| | || |||| ||| ||| |||| |||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | || |||||||| ||| || ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 121 bits (61), Expect = 3e-27
Identities = 133/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||| |||||||||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | |||||| | | || |||| | ||||||||||| ||| |||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtact 167
|| |||||||||||||| |||||||||| ||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtact 3
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||| || | |||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 74 atgaatctaaaca--tatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||| || ||| ||||||||| || |||| | || |||||||| ||||| || |||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| | ||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||||||||| ||||||||||||||||||||| ||||| || ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | || || ||||| ||| |||| |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| ||||||||| |||| |||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 10 catctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttat 69
|||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1 catctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttat 60
Query: 70 attaatgaatcta 82
||||||||||||
Sbjct: 61 gttaatgaatcta 73
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| |||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 153 ctactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgct 94
Query: 73 aatgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatac 132
|||||||||| ||||||||| || |||| | | |||||||| ||| |||| ||| |
Sbjct: 93 aatgaatctagacatatatc----tagattcattagcatcaatatgaatgtgggaaatgc 38
Query: 133 taaaatgacttacattgggaaacggaggaagtac 166
|| |||||||||||||| ||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtac 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||||||||||||||| | || |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| | |||||| | | ||||||| | || || | ||| ||| |||| ||| |
Sbjct: 96 atgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcc 37
Query: 134 aaaatgacttacattgggaaacggaggaagta 165
| ||||||||| |||| |||||||||||||||
Sbjct: 36 agaatgacttatattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||||||||||||||| |||||| |||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
|||||| || |||||||| ||| || |||| | || || | ||| ||| || ||| ||
Sbjct: 65 atgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgct 124
Query: 134 aaaatgacttacattgggaaacggaggaagtac 166
| |||||||||||||| |||||||||| |||||
Sbjct: 125 agaatgacttacattgtgaaacggagggagtac 157
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| |||| ||||||||||||||||||| ||||| ||| ||||||||| || |
Sbjct: 159 ctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgct 100
Query: 73 aatgaatctaaacat--atatctatttaaattcctcaatatcaatataaatatggggaat 130
||||||||||||||| |||||||| ||||||| | | |||||||| ||||||| |||
Sbjct: 99 aatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
|||| ||||||||| | || | |||||||||||||
Sbjct: 39 actagaatgacttatactgtggaacggaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| |||| |||| ||||||||||||||| ||||| || ||||||||| || |
Sbjct: 4 ctacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgct 63
Query: 73 aatgaat 79
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 119 bits (60), Expect = 1e-26
Identities = 130/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||||||||||||| ||||||||| |||||| ||||| || ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| | ||||||| ||||||| | | |||||| ||||| || | ||| ||
Sbjct: 92 atgaatctagagatatatc----taaattcattagcatcaatgtaaatgtgagaaatgct 37
Query: 134 aaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||||| ||||||||||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagtac 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 122/152 (80%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| |||||||| ||||||| | ||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
|||||| || | |||| |||| |||| | | |||||||||||| ||| ||| ||
Sbjct: 65 atgaatttagatatatctctag----attcattagcatcaatataaatgtggaaaatgct 120
Query: 134 aaaatgacttacattgggaaacggaggaagta 165
||||||||||| |||| |||||||||| ||||
Sbjct: 121 aaaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||| ||||||| |||||||||||| || ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtt 63
Query: 73 aatgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| || |||||||||| || |||| | || || ||||| ||| |||| |||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaat 123
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
||||||||||||| |||| |||||||||||||||
Sbjct: 124 gctaaaatgacttatattgtgaaacggaggaagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||| ||| ||||||||||||||||||||| |||||||| |||||||||||| || |
Sbjct: 160 tctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgt 101
Query: 72 taatgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaa 129
|||||||||| | | |||||| | | || |||| | || |||||||| ||| |||| ||
Sbjct: 100 taatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaa 41
Query: 130 tactaaaatgacttacattgggaaacggaggaagta 165
| ||| |||||||||||||| |||||||||| ||||
Sbjct: 40 tgctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | |||||| | | || |||| | || |||||||| ||| |||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| |||||||||||| |||| |||||||||||| || ||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 73 aatgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaat 130
||||||| || || |||||||||| || |||| | || |||||||| ||| |||| |||
Sbjct: 99 aatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| |||||||||||||||||||||||| | |||| |||||||||||| || ||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtt 63
Query: 73 aatgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaat 130
||||||||| | | |||||| ||| || |||| | ||||||||||| ||| |||| |||
Sbjct: 64 aatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaat 123
Query: 131 actaaaatgacttacattgggaaacggaggaagtac 166
||| ||||||||| |||| |||||||||| |||||
Sbjct: 124 gctagaatgacttatattgtgaaacggagggagtac 159
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 74 atgaatctaaacatatat 91
||||||||| | ||||||
Sbjct: 98 atgaatctagatatatat 81
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 8e-25
Identities = 129/153 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||||||||||||||||||||||||||||| ||| || ||||| || |||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
|||||||| |||||| |||| || |||| | || |||||||| ||| |||| ||| ||
Sbjct: 96 atgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 134 aaaatgacttacattgggaaacggaggaagtac 166
| |||||||||||||| |||||||||| |||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagtac 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| | | || | | | |||| | || ||||||||||| |||| ||| ||
Sbjct: 65 atgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgct 124
Query: 134 aaaatgacttacattgggaaacggaggaagta 165
| ||||||||| |||| |||||||||||||||
Sbjct: 125 agaatgacttatattgtgaaacggaggaagta 156
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 132/156 (84%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||| ||||| |||||||||||| || |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 73 aatgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| || |||||||||| || |||| | | ||||||||| ||| || | |||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagtac 166
||| ||||||||| |||| ||||||||||||||||
Sbjct: 39 gctagaatgacttatattgtgaaacggaggaagtac 4
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||||||||||||||||||||||||||||| ||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 74 atgaatctaaacatat 89
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 74 at 75
||
Sbjct: 65 at 66
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||||||||||||||||||||||| | ||||||||| || |
Sbjct: 159 ctactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgct 100
Query: 73 aatgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| |||||||| |||| || | || | || ||||||| ||| ||| |||
Sbjct: 99 aatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||||||||||||| ||||||| |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 74 atgaatcta 82
|||| ||||
Sbjct: 65 atgactcta 73
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 73 aatgaatctaaacatatatctatt--taaattcctcaatatcaatataaatatggggaat 130
|||||||||| |||||||| | | |||||| | ||||| ||||| ||| ||| |||
Sbjct: 99 aatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 39 gctataatgacttacattgtgaaacggagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 74 atgaatcta--aacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|| ||| || | |||||| | | || |||| | || |||||||| ||| |||| |||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||| |||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| |||||||| | | || |||| | || |||||||| ||| | | ||| ||
Sbjct: 96 atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37
Query: 134 aaaatgacttacattgggaaacggaggaagta 165
| |||||||||||||| | |||||||||||||
Sbjct: 36 agaatgacttacattgtggaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 128/153 (83%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||| |||||| ||||||||||||||||||| ||||||||||| || |||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
|||||| || |||||||| | | || |||| | || |||||||| ||| |||| ||| ||
Sbjct: 65 atgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatgct 124
Query: 134 aaaatgacttacattgggaaacggaggaagtac 166
| |||||||||||||| | |||||||| |||||
Sbjct: 125 agaatgacttacattgtggaacggagggagtac 157
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||| |||| |||||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | || |||||||| || ||| |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
||| |||||||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||||||||||||| ||||| |||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | |||||| | | || |||| | || | |||||| ||| |||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||| ||||||||| | |||||| |||||| ||||| || ||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 74 atgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| |||||||| |||| || |||| | || |||||||||||| |||| |||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||| ||| ||||||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagtac 159
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||||||||| ||||||||| |||||||| |||||| ||||| || |||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | | |||| | | || |||| | || |||||||||||| |||| |||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
| |||||||||||| ||| |||||||||| ||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 131/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||| ||||| |||||||||||| || |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | ||||||||||| ||| | ||||| |
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgt-gggaaaa 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| ||| |||||||||| ||||||||| ||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 126/154 (81%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||| ||||| ||||| ||||||| ||| |||||||||||| ||||||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | |||||| | | || |||| | || |||||||| ||| ||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||| | ||||||||| || ||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 74 atgaatctaaaca--tatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| ||| ||||| |||||| |||| |||| ||| |||| ||| |||| |||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| ||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 74 atgaatctaaacatatat 91
||||||||||| ||||||
Sbjct: 98 atgaatctaaatatatat 81
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 107 bits (54), Expect = 5e-23
Identities = 129/153 (84%), Gaps = 7/153 (4%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||||||||||||||||| |||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 74 atgaatctaaacatatatctatttaaattcc-tcaatatcaatataaatatggggaatac 132
||||| ||| | ||||||||| || | | || |||||||||||| |||| |||||
Sbjct: 65 atgaaactaca------tctatttaagtttcattaacatcaatataaatgtgggaaatac 118
Query: 133 taaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||||||||
Sbjct: 119 tagaatgacttacattgtgaaacggaggaagta 151
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||| ||| ||||||||||| ||||||||||||| |||| |||||| ||||| || |
Sbjct: 153 tctacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgt 94
Query: 72 taatgaa 78
|||||||
Sbjct: 93 taatgaa 87
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 75 atgaatctagacatatat 58
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| | ||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||| ||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 77 aatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||| ||| |||| |||||| ||||| || |
Sbjct: 159 ctactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggt 100
Query: 73 aatgaatcta--aacatatatctatttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| || |||||||||| || |||| | || ||||||| ||| |||| |||
Sbjct: 99 aatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagtac 166
||| |||||||||||||| ||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtac 4
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 74 atgaatctaaacatatatctatt--taaattcctcaatatcaatataaatatggggaata 131
||||||||| | | |||| |||| || |||| | | |||||||| ||| |||| |||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||||||||||||| |||| |||||||||| ||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
||||||||||| ||| || | ||| ||| |||||||||||||| |||||||||| |||||
Sbjct: 63 aatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggagtac 4
Query: 167 t 167
|
Sbjct: 3 t 3
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||| |||||||||||||||||| || |||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatatt 90
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||| |||||||| |||||| |||||| || |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgct 100
Query: 73 aatgaatctaaacatatatcta--tttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| |||||||| | | || |||| | ||||| | ||| ||| |||| |||
Sbjct: 99 aatgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||| | | || |||| | | |||||||| || || | |||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
|||||||||||||||||| |||||||||| ||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 8e-22
Identities = 127/152 (83%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||||||| ||||||||||||||||||||| || |||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| ||||||| | | | |||| | || ||| | || ||| |||| ||| ||
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 134 aaaatgacttacattgggaaacggaggaagta 165
|||||||||||||||| |||||||||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| ||||||||| |||||||| ||||||||| | || ||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtt 63
Query: 73 aatgaatctaaacatatat 91
|||||||| | ||||||||
Sbjct: 64 aatgaatcaagacatatat 82
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 124/147 (84%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| | |||||| || ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | || |||||||| ||| || | |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 132 ctaaaatgacttacattgggaaacgga 158
|| |||||||||||||| ||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||| | ||||||||||| |||||||||||| ||||| ||||||||||||| || |||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | |||||| | | || |||| | |||||||| || ||| | | |||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 74 atgaatctaaacatatatctat--ttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || ||||| ||| || |||| | | ||| |||| ||| ||| |||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
||| |||||| ||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagtac 4
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| || |||||||||||||| | ||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 74 atgaatctaaacatatatcta--tttaaattcctcaatatcaatataaatatggggaata 131
||||||||| ||||||| || | || |||| | || |||||||| ||| ||| |||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 103 bits (52), Expect = 8e-22
Identities = 134/160 (83%), Gaps = 6/160 (3%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||||||||| |||||||||| | || ||
Sbjct: 163 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 104
Query: 73 aatgaatctaaac--atatatctatttaaattcctcaatatca----atataaatatggg 126
|||||||||| || |||||||||| || |||| | || |||| ||| |||||| |
Sbjct: 103 aatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcg 44
Query: 127 gaatactaaaatgacttacattgggaaacggaggaagtac 166
||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 8e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 74 atgaatctaaacatat 89
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 74 at 75
||
Sbjct: 65 at 66
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||| ||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | || |||| ||| || | |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
Score = 97.6 bits (49), Expect = 5e-20
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| | |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 74 atgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||| | | |||||| | | || |||| | ||||||||||| ||| |||| |||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtact 167
|| |||||||||||||| |||||||||| ||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagtact 3
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| |||||||| |||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 74 atgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| || |||||||||| || |||| | || |||||||| || | ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaata 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 129/156 (82%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcac-attcatatttatat 71
||||||||| ||||||||||| ||||||||||||| ||||| ||| | ||||| || |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagtatttt-cactagaaatattgatgt 62
Query: 72 taatgaatctaaacatatatctattt--aaattcctcaatatcaatataaatatggggaa 129
||||||||||| | | |||| ||| | | |||| | ||||||||||| ||| |||| ||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaa 122
Query: 130 tactaaaatgacttacattgggaaacggaggaagta 165
||||| |||| ||||||||| |||||||||| ||||
Sbjct: 123 tactagaatgtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 17 tcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatattaatg 76
||||| ||||||||||| |||||||||||||||||| |||||||||||||||| | ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 77 aatctaaacatata 90
|||||| |||||||
Sbjct: 75 aatctagacatata 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 17 tcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||| ||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 131/156 (83%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||||||| ||||||||||| |||||||||| ||||||| || ||||||||| || |
Sbjct: 3 tctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgt 62
Query: 72 taatgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaa 129
||||||||||| |||||||| |||| || ||| | || |||||||||||| || ||
Sbjct: 63 taatgaatctagacatatatatctatatagatttattaacatcaatataaatgtga--aa 120
Query: 130 tactaaaatgacttacattgggaaacggaggaagta 165
| ||| |||||||||||||| |||||||||| ||||
Sbjct: 121 tgctagaatgacttacattgtgaaacggagggagta 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||| || ||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagca--tttcacatttatattgatgtt 100
Query: 73 aatgaatc--taaacatatatctatttaaattcctcaatatcaatataaatatggggaat 130
||| |||| || | |||||| | | || |||| | || |||||||| |||||||| |||
Sbjct: 99 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||| ||||
Sbjct: 39 gcttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/153 (83%), Gaps = 7/153 (4%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 73 aatgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatac 132
|||||||||| | || || || |||| | || |||||||| ||| |||| ||| |
Sbjct: 90 aatgaatctaga---atgtc----tagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 133 taaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 8e-19
Identities = 126/153 (82%), Gaps = 7/153 (4%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 73 aatgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatac 132
|||||||||| |||| | || |||| | || |||||||| ||| |||| ||| |
Sbjct: 64 aatgaatctagacat-------tctagattcattaacatcaatatgaatgtgggaaatgc 116
Query: 133 taaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||| ||||
Sbjct: 117 tagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||| ||||| || ||| ||||| || ||
Sbjct: 158 ctactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtt 99
Query: 73 aatgaatctaaacatata-tctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||||| | ||||| ||||| || |||| | | |||||||| ||| || | |||
Sbjct: 98 aatgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 128/153 (83%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||||| |||| |||||||||||||||||| ||||||||||||| || ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 74 atgaatctaaaca-tatatctatttaaattcctcaatatcaatataaatatggggaatac 132
||||||||| | | |||| ||| || |||| | || || |||||||||||||| |||
Sbjct: 65 atgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatgt 124
Query: 133 taaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||| ||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 131/156 (83%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||||||| ||||||||||| |||||||||| ||||||| || ||||||||| || |
Sbjct: 158 tctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgt 99
Query: 72 taatgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaa 129
||||||||||| |||||||| |||| || ||| | || |||||||||||| || ||
Sbjct: 98 taatgaatctagacatatatatctatatagatttattaacatcaatataaatgtga--aa 41
Query: 130 tactaaaatgacttacattgggaaacggaggaagta 165
| ||| |||||||||||||| |||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||| || ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagca--tttcacatttatattgatgtt 61
Query: 73 aatgaatc--taaacatatatctatttaaattcctcaatatcaatataaatatggggaat 130
||| |||| || | |||||| | | || |||| | || |||||||| |||||||| |||
Sbjct: 62 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 121
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||| ||||
Sbjct: 122 gcttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||||||||||||| |||||||| || ||||||||| || |||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 74 atgaatctaaacatatatctat 95
||||||||| ||||||||||||
Sbjct: 89 atgaatctagacatatatctat 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| |||||||| ||| ||||||||||||| |||| |||||||||| ||||
Sbjct: 94 atcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| || ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 122/146 (83%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 17 tcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatattaatg 76
||||| ||||||||||| |||||||||||||||||| ||||||||||||| || | ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 77 aatctaaacatatatcta--tttaaattcctcaatatcaatataaatatggggaatacta 134
|||||| |||||||| || | || |||| | || ||||||| ||| || | || |||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 135 aaatgacttacattgggaaacggagg 160
|||||||||||||| ||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
Score = 73.8 bits (37), Expect = 7e-13
Identities = 119/146 (81%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 17 tcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatattaatg 76
||||| ||||||||||| |||||||||||||||| | ||||||||||||| | || ||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 77 aatctaaacat--atatctatttaaattcctcaatatcaatataaatatggggaatacta 134
|||||| |||| |||| | | || |||| | | |||||||| ||| || | ||| |||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 135 aaatgacttacattgggaaacggagg 160
|||||||||||||| ||||||||||
Sbjct: 128 gaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 97.6 bits (49), Expect = 5e-20
Identities = 128/153 (83%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| |||||||||| | ||||| |||||||||||| ||
Sbjct: 156 ctactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcc 97
Query: 73 aatgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatac 132
|||| ||||| || ||||||||| || |||| | | ||||||||| ||| |||| |||||
Sbjct: 96 aatggatctagac-tatatctatctagattcattagtatcaatatgaatgtgggaaatac 38
Query: 133 taaaatgacttacattgggaaacggaggaagta 165
|| ||||||||| |||| |||||||||||||||
Sbjct: 37 tagaatgacttatattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||||||||||||||||| |||| |||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||||||||||||||||||||||||||||| ||||||||||||| || |||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 74 atgaatcta 82
|||||||||
Sbjct: 67 atgaatcta 59
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagtact 167
|||||||||||||| |||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtact 3
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||||||| ||| || | ||| ||| ||||||||| |||| |||||||||||||||||
Sbjct: 72 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagtact 129
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 118/143 (82%), Gaps = 10/143 (6%)
Strand = Plus / Plus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatcta 73
Query: 83 aacatatatctatttaaattcctcaatatcaatataaatatggggaatactaaaatgact 142
|| || |||| | ||||||||||||||||||| ||| ||| |||||||
Sbjct: 74 ----------gatgtagattcattaatatcaatataaatatggaaaatgctagaatgact 123
Query: 143 tacattgggaaacggaggaagta 165
||||||| |||||||||| ||||
Sbjct: 124 tacattgtgaaacggagggagta 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| || ||| ||||| ||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 74 atgaatcta 82
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| |||||||||||||||||| ||| ||||||||| |||||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 73 aatgaatctaaa 84
||||||||||||
Sbjct: 67 aatgaatctaaa 56
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatattta 68
||||| ||| ||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatattta 59
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 93 tatttaaattcctcaatatcaatataaatatggggaatactaaaatgacttacattggga 152
|||||| |||| | ||||||||||| |||||| | ||| ||| ||||||||||||| ||
Sbjct: 54 tatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 113
Query: 153 aacggaggaagta 165
|||||||| ||||
Sbjct: 114 aacggagggagta 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||| ||| ||| ||| ||||||||| |||| |||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 118/143 (82%), Gaps = 10/143 (6%)
Strand = Plus / Plus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 14 cgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatcta 73
Query: 83 aacatatatctatttaaattcctcaatatcaatataaatatggggaatactaaaatgact 142
|| || |||| | ||||||||||||||||||| ||| ||| |||||||
Sbjct: 74 ----------gatgtagattcattaatatcaatataaatatggaaaatgctataatgact 123
Query: 143 tacattgggaaacggaggaagta 165
||||||| |||||||||| ||||
Sbjct: 124 tacattgtgaaacggagggagta 146
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||| ||||||||| || ||| ||||| ||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 74 atgaatcta 82
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| |||||||||||||||||||||||||||| | |||||||||||| || ||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 73 aatgaatctaaacat 87
|||||||||||||||
Sbjct: 73 aatgaatctaaacat 59
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| || ||| ||||||||| |||| |||||||||||||||
Sbjct: 77 atcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 93.7 bits (47), Expect = 8e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||| ||| ||||||| |||||||||||||||| |||||| |||||||||||| || |
Sbjct: 141 tctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgt 82
Query: 72 taatgaatctaaacatata 90
||||||||||| |||||||
Sbjct: 81 taatgaatctagacatata 63
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacatt 60
||||||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatttttcacatt 51
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| ||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 74 atgaatctaaacatatat 91
|||||| |||||||||||
Sbjct: 98 atgaatttaaacatatat 81
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||| |||||| | |||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 74 atgaatctaaa--catatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| | ||||||| | ||||||||| | | ||| |||| ||| ||| |||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||||||| ||| |||| ||| ||| |||||||||||||| |||||||||| |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggtagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||| ||||||||||||||||||| |||| ||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcattttgtacatacatatt 88
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagtac 166
|||||||||||||| ||||||||||||||||
Sbjct: 111 aatgacttacattgtgaaacggaggaagtac 141
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
||||||| || ||||||||||| |||||||||||| ||||| |||||||||||| || |
Sbjct: 3 tctactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgt 62
Query: 72 taatgaatctaaacatat 89
||||||||||||||||||
Sbjct: 63 taatgaatctaaacatat 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttt 53
||||| || ||||||||||| |||||||||||||||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcatttt 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggag 159
|||||||| ||| |||| ||| || |||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||||||||||||||||| ||| ||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcata 64
|||| ||| ||||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata 95
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||||||| |||||| | ||| ||| ||||||||||||| |||||||||| |||||
Sbjct: 60 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtac 4
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| || ||||||||| || |||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 74 atgaatcta 82
|||||||||
Sbjct: 85 atgaatcta 77
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||| ||| |||||||||||||||||| ||||||| ||||| || ||||| ||||||
Sbjct: 14 cgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||||||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 90 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||| ||||| ||||||||| ||||| ||||| || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 74 atgaat 79
||||||
Sbjct: 86 atgaat 81
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 74 atgaatcta 82
|||||||||
Sbjct: 72 atgaatcta 64
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 108 atatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 62 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 62
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 74 atgaatcta 82
||| |||||
Sbjct: 65 atgtatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||| |||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 74 atgaatcta 82
||| |||||
Sbjct: 86 atgtatcta 78
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatctaaacatata 90
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||||||| ||| |||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| |||||||||||||||||||||||||||||| |||||||| ||| |||||
Sbjct: 4 ctactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatt 63
Query: 73 aatga 77
|||||
Sbjct: 64 aatga 68
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| |||||||||||||||||||||||||||||| |||||||| ||| |||||
Sbjct: 136 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatt 77
Query: 73 aatgaatct 81
|||||||||
Sbjct: 76 aatgaatct 68
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||| | ||| |||| ||| ||| ||||||||| |||| |||||||||||||||
Sbjct: 77 aatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 135
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| ||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 108 atatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 75 atatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/154 (82%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||||||| ||||||| ||| |||||||||||||||||| |||||||||||| || |
Sbjct: 154 tctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgt 95
Query: 72 taatgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
|||||||||| ||| || || || |||| | | |||||||| ||| |||| |||
Sbjct: 94 caatgaatctagacagatgtc----tagattcattgacatcaatatgaatgtgggaaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
|| |||||||||||||| |||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 123/152 (80%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||| ||||| |||||||||||| || | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| || |||| | || |||| | | |||||||| ||| |||| ||| ||
Sbjct: 65 atgaatctagac----atctgtctagattcattgacatcaatatgaatgtgggaaatgct 120
Query: 134 aaaatgacttacattgggaaacggaggaagta 165
| ||||||||||||| |||||||||| ||||
Sbjct: 121 agaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 74 atgaatcta 82
|||||||||
Sbjct: 75 atgaatcta 67
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatatt 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||| ||| ||||||||| |||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/154 (81%), Gaps = 8/154 (5%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| |||||||| |||| | || |||||||| ||| |||| ||| ||
Sbjct: 65 atgaatctagacatatat--------attcattaacatcaatatgaatgtgggaaatgct 116
Query: 134 aaaatgacttacattgggaaacggaggaagtact 167
| |||||||||||||| ||||||| || ||||||
Sbjct: 117 agaatgacttacattgtgaaacggggggagtact 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 124/152 (81%), Gaps = 8/152 (5%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
||||||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
|||| |||||| | | || |||| | || || ||||||||| |||| ||| ||
Sbjct: 88 atga--------atatatatgtctagattcattaacattaatataaatgtgggaaatgct 37
Query: 134 aaaatgacttacattgggaaacggaggaagta 165
| |||||||||||||| |||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 87.7 bits (44), Expect = 5e-17
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||| ||| ||||||| ||| |||||||||||||||||| |||||||||||| || |
Sbjct: 131 tctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgt 72
Query: 72 taatgaatctaaacatatatctat 95
||||| ||||| ||||||||||||
Sbjct: 71 taatggatctagacatatatctat 48
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| ||||||||||||| |||||||||||||||
Sbjct: 74 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 129
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata 70
||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| ||
Sbjct: 152 atctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatg 93
Query: 71 ttaatgaa 78
||||||||
Sbjct: 92 ttaatgaa 85
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||| ||| ||||||||||||||||||| |||||||||||| || ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||||||||||||||||||||||||||||| ||||||||||||| || ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 74 atgaatct 81
||||||||
Sbjct: 75 atgaatct 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||||| ||||||| || |||||||||||||||||| |||||||||||||
Sbjct: 3 tctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatatt 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| || | ||| ||| ||||||||| |||| |||||||||||||||
Sbjct: 80 atcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 135
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||| | ||||||| ||| |||||||||| | ||||| |||||||||||| || |
Sbjct: 159 ctactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggt 100
Query: 73 aatgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaat 130
|||||||||| || |||||||||| || |||| | || | |||||| ||| |||| |||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
||| |||||||||||||| |||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||| |||||||||||||| ||||||||||||| || |||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 74 atgaatc 80
|||||||
Sbjct: 81 atgaatc 75
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatc 80
|||||||
Sbjct: 65 atgaatc 71
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| ||||||||||||||||| |||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 74 atgaatctaaacatatatc--tatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| ||| | ||| ||| ||||||| | || ||| ||||| || |||| |||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| ||||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatt 51
|||| ||| ||||||| ||| |||||||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/110 (85%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttttcacattcatatttatattaatgaatctaaac--atatatct 93
||||||||||||||||| |||||||||||| || |||||||||||| || ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 94 atttaaattcctcaatatcaatataaatatggggaatactaaaatgactt 143
||||| |||| | || |||||||| ||| |||| ||| ||| ||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 36 aagtcattctagcatttttcacattcatatttatattaatgaatctaaa 84
||||||||||||||||| |||||||||||| || ||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaa 62
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||| ||| ||||||||||||||||||| |||||||||||| || ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata 70
||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||
Sbjct: 149 atctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatg 90
Query: 71 ttaatgaatctaaacata 88
|||||||| ||| |||||
Sbjct: 89 ttaatgaaactagacata 72
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacat 59
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttcacat 50
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttca 56
|||||||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttca 62
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 10 catctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttat 69
|||||||||||| |||||||| || ||||||| |||| |||||| |||||||||||| ||
Sbjct: 134 catctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgat 75
Query: 70 attaatgaatctaaacatatat 91
|||||||||||| | ||||||
Sbjct: 74 gttaatgaatctagatatatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| ||||||||||| |||||| | |||||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
||||||||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||| ||| |||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||| ||| |||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| |||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 74 at 75
||
Sbjct: 65 at 66
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
|||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||| ||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 63 aatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||| ||| |||| ||| ||| ||||||||| |||| |||||||||||||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| ||||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 74 atgaatctaaacat 87
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||| | |||| || ||| |||||||||||| ||||| ||||||||||| | ||
Sbjct: 4 ctactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtt 63
Query: 73 aatgaatctaaacatatat 91
|||||||||| | ||||||
Sbjct: 64 aatgaatctagatatatat 82
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||| ||||
Sbjct: 129 aatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 70 atgaatctagacatatat 53
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||| ||| ||||||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 140 acttacattgggaaacggaggaagtac 166
|||||||||| ||||||||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 7e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||| ||||||||||||| |||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 74 atgaatctaaacat 87
||||||||||||||
Sbjct: 64 atgaatctaaacat 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||| ||| ||||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 132 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatatt 79
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||||||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 76 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 17 tcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatattaatg 76
||||| |||||||||||||||||||||||||||||| ||| || ||||| |||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 77 aatcta 82
||||||
Sbjct: 68 aatcta 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcat 63
|||| ||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcat 88
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
||||||||||||| |||| ||||||||||||||||
Sbjct: 104 ctaaaatgacttatattgtgaaacggaggaagtac 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggagg 160
||||||||||| ||||| | ||| ||| ||||||||| |||| ||||||||||
Sbjct: 63 aatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| || ||||||||| || |||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 74 atgaatcta 82
|||||||||
Sbjct: 79 atgaatcta 71
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||||||| |||||||| ||| ||| |||||||||||||| |||||||||| ||||||
Sbjct: 84 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagtact 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 119 aatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||||||||||||| |||||||||||||||
Sbjct: 51 aatatgggaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||| ||| ||||||| ||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatatt 87
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||| | ||| |||||||||||||||||| |||||||||||||||
Sbjct: 60 atcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| |||||||| ||| ||| ||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 74 atgaatctaaacatata 90
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||| ||||||||||||| |||| |||||||||| ||||
Sbjct: 84 atcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
||||||||| ||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatatt 100
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 31 aatataagtcattctagcatttttcacattcatatttatattaatgaatctaaacatata 90
|||||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagacatata 49
Query: 91 t 91
|
Sbjct: 48 t 48
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 35 taagtcattctagcatttttcacattcatatttatattaatgaat 79
|||||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 5 taagtcattctagcatttctcacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/153 (82%), Gaps = 11/153 (7%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| ||| ||| ||||| || |||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
|| |||||| | || |||||| || ||| ||||||| ||| |||| ||| ||
Sbjct: 85 ataaatctaga--tagatctatcta------tca---tcaatatgaatgtgggaaatgct 37
Query: 134 aaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||||| ||||||||||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagtac 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||| | ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 90 atcaatataaatatgagaaatgctagaatgacttacattgtgaaacggagggagta 145
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||| |||||||||| |||||||| || ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 74 atgaatcta 82
|||||||||
Sbjct: 71 atgaatcta 63
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 17 tcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
||||| |||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||| ||||
Sbjct: 102 aatgacttacattgtgaaacggagggagta 131
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||||||| |||||||| ||| ||| |||||||||||||| |||||||||| ||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagtact 3
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 119 aatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||||||||||||| |||||||||||||||
Sbjct: 93 aatatgggaaatgctagaatgacttacattatgaaacggaggaagta 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||| ||| ||||||| ||| ||||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcattt 101
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||||| |||| |||||||||||| || ||
Sbjct: 153 ctactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtt 94
Query: 73 aatga 77
|||||
Sbjct: 93 aatga 89
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||||||||||||||||| |||||||||||| ||||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 74 atgaatcta 82
|||||||||
Sbjct: 55 atgaatcta 47
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||| ||| |||| ||| ||| ||||||||||||| |||||||||||||||
Sbjct: 57 aatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcat 50
||||||||| ||||||||||| ||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcat 41
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 74 atgaatcta 82
|||||||||
Sbjct: 70 atgaatcta 62
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 24 gtttcacaatataagtcattctagcatttttcacattcatatttatattaat 75
|||||||||||||||||||| ||||||||| |||||||||||| || |||||
Sbjct: 11 gtttcacaatataagtcattatagcattttccacattcatattgatgttaat 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||||||||||||| ||||| |||| ||||
Sbjct: 75 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagggagta 130
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||||||| |||||||| ||| ||| |||||||||||||| |||||||||| ||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagtact 3
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||||||||||||||||| || ||||||||| || |||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 74 atgaatcta 82
|||||||||
Sbjct: 80 atgaatcta 72
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| |||||||| ||| ||| ||||||||||||| |||||||||||||||
Sbjct: 85 atcaatatgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 140
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| || |||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 74 atgaatcta 82
|||||||||
Sbjct: 87 atgaatcta 79
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||||||| ||| || | |||||||||||||||||||||| |||||||||| |||||
Sbjct: 92 atcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggagggagtac 148
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||||||||||||| ||| ||||| |||||||||||| || |||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 74 atgaatcta 82
|||||||||
Sbjct: 70 atgaatcta 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 75 atcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggaggaagta 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||| ||||||||| | | ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatatt 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| ||||| |||||||||||||||| |||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||||||||| | ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||||||| ||||| | ||| ||| |||||||||||||| |||||||||| ||||||
Sbjct: 60 atcaatatgaatatagaaaatgctagaatgacttacattgtgaaacggagggagtact 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||||||||||||||||||||||| |||| ||||||||||| || |||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 74 at 75
||
Sbjct: 78 at 77
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| | || |||| || ||||||||| |||| |||||||||||||||
Sbjct: 83 atcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaagta 138
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 25 tttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatatt 63
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||| ||||| |||||||||||| || |||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 74 atgaatcta 82
|||||||||
Sbjct: 76 atgaatcta 68
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 108 atatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||||||||| |||||||| ||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 62 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||| ||| ||||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 88 atatctatttaaattcctcaatatcaatataaatatggggaatactaaaatgacttacat 147
|||||||| || |||| | || |||||||| ||| |||| ||| || ||||||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 148 tgggaaacggaggaagta 165
|| |||||||||| ||||
Sbjct: 119 tgtgaaacggagggagta 136
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||||||||||||||||| |||||||||||| || |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 73 aatgaatc 80
||||||||
Sbjct: 64 aatgaatc 71
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 74 atgaatc 80
|||||||
Sbjct: 78 atgaatc 72
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| ||||||||||||| |||||||||| ||||
Sbjct: 83 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||| ||||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 74 atga 77
||||
Sbjct: 65 atga 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||||||| ||| ||| ||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggagtact 3
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||| ||| | ||| ||||||||| ||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatatt 76
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||| ||| ||||||| ||| |||| ||||||| ||||||||||||||||||| || |
Sbjct: 132 tctacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgt 73
Query: 72 taatgaatcta 82
|||||||||||
Sbjct: 72 taatgaatcta 62
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| |||||||||||||||||| ||||||||||| |||||
Sbjct: 127 ctacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatt 68
Query: 73 aatgaat 79
|||||||
Sbjct: 67 aatgaat 61
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
|||||||| ||||||||||| |||||||||||||||||| ||| ||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatatatatt 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||| ||| | || ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 68 aatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 123 tggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||| ||| ||| |||||||||||||| |||||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| ||||||||||||||||| || |||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 74 atgaatctaaacatatatc--tatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| ||| | ||| ||| ||||||| | || ||| |||| || |||| |||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| ||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 124/156 (79%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||| ||| ||||||| ||| ||||||||||||||||| ||||| ||||| || |
Sbjct: 3 tctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgt 62
Query: 72 taatgaatctaaacat--atatctatttaaattcctcaatatcaatataaatatggggaa 129
|||||||| || | || || | | | || |||| | || ||| |||| |||||||| ||
Sbjct: 63 taatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaa 122
Query: 130 tactaaaatgacttacattgggaaacggaggaagta 165
| ||| ||||||||||||| |||||||||| ||||
Sbjct: 123 tgctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| ||||||||| ||||||| ||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 74 atgaatctaaacatatatctattt--aaattcctcaatatcaatataaatatggggaata 131
|||||||||||||||| ||||| | | |||| | || ||| |||| ||||||| ||
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| ||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||| ||| |||| ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 107 atatgaatgtgggcaatgctaaaatgacttacattatgaaacggagggagtact 160
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| ||||||||||||||||||| || ||||||||| || ||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 73 aatgaat 79
|||||||
Sbjct: 64 aatgaat 70
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||||||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||| || ||||||| ||| ||||||||||||||||||| || |||||||||
Sbjct: 130 ctactctctccgtttcataatgtaagtcattctagcattttccatattcatatt 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggag 159
|||||||| ||||||| ||| ||| ||||||||||||| |||||||||
Sbjct: 74 atcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
|||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| |||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 74 at 75
||
Sbjct: 65 at 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||| |||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 63 aatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||| ||| |||| ||| ||| ||||||||| |||| |||||||||||||||
Sbjct: 78 aatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 10 catctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttat 69
|||||||| ||| ||||||||||| |||||||||||||||||| ||||||| ||||| ||
Sbjct: 1 catctacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaat 60
Query: 70 attaatg 76
||||||
Sbjct: 61 gttaatg 67
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||| || | ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 57 aatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatt 51
|||||||| | |||| |||||| |||||||||||||||||
Sbjct: 103 tctactccttccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 108 atatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||||| |||||||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 80 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||| ||| ||||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 80
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcat-tctagcatttttcacattcatatttatatt 72
|||||||| ||||||||||| |||||| |||| ||||| |||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 65 aatgaatcta 74
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| |||||||||||||||||| ||||||||||| || ||
Sbjct: 124 ctactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtt 65
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttt 53
|||| ||| ||||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt 44
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 119 aatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| | ||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatatt 64
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 128 aatactaaaatgacttacattgggaaacggaggaagta 165
||||||| |||||||||||||| |||||||||| ||||
Sbjct: 42 aatactataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 73
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 57
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| ||||||||||||||||||| ||||||||||| || |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||||||||||| ||| ||||||| |||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 74 atgaatcta 82
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 128/157 (81%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata 70
||||||| ||| ||||||| ||| ||||||||||||||| | |||||||||||| ||
Sbjct: 2 atctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatg 61
Query: 71 ttaatgaatctaaacatatatc--tatttaaattcctcaatatcaatataaatatgggga 128
|||||||||||| | |||| || ||| || |||| | || ||| |||| ||||| || |
Sbjct: 62 ttaatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggca 121
Query: 129 atactaaaatgacttacattgggaaacggaggaagta 165
|| ||| ||||||||||||| |||||||||| ||||
Sbjct: 122 atgctagaatgacttacattatgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatt 51
||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 159 ctactccctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| ||||||||||||||||||| |||| | ||||| || ||
Sbjct: 140 ctactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtt 81
Query: 73 aatgaatcta 82
||| ||||||
Sbjct: 80 aataaatcta 71
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcaca 58
|||||||| | ||||||||| ||||||||| ||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcaca 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||||| | ||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 84 atcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggagta 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||||||| |||| ||||| |||||
Sbjct: 38 ctaaaatgacttacattgtgaaatggagggagtac 4
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||||||| |||||||||||||||| | |||||||||| ||||| ||||| || |
Sbjct: 138 tctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgt 79
Query: 72 taatgaatctaaacatat 89
||||||||||||||||||
Sbjct: 78 taatgaatctaaacatat 61
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||||||| |||||||||||||||| | |||||||||| ||||| ||||| || |
Sbjct: 3 tctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgt 62
Query: 72 taatgaatctaaacatat 89
||||||||||||||||||
Sbjct: 63 taatgaatctaaacatat 80
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| ||||||||||||||||||| ||||||||||| || |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| ||||||||||||| ||||||||||| ||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 74 atgaatcta 82
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| ||||||||||||| |||| ||||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||| ||||
Sbjct: 65 atgaatctagacaaatat 82
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatattt 67
|||||||||| | ||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 132 tctactccctccatttcataatgtaagtcattctagcatttctcacattcatattt 77
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| || | ||||||| ||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| ||||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 74 atgaat 79
||||||
Sbjct: 65 atgaat 70
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatatatat 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagtact 167
|||||||||||||| |||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtact 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||| ||||||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||| ||| ||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| || | ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcat 50
||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 112 ctactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||||||||||||||||| || ||||| || |||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 74 atgaat 79
||||||
Sbjct: 71 atgaat 66
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttt 53
|||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttt 44
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||||||| |||||||||| |||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggagggagtac 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||||||||
Sbjct: 102 aatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 128/157 (81%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata 70
||||||| ||| ||||||| ||| ||||||||||||||| | |||||||||||| ||
Sbjct: 161 atctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatg 102
Query: 71 ttaatgaatctaaacatatatcta--tttaaattcctcaatatcaatataaatatgggga 128
|||||||||||| | |||| |||| | || |||| | || ||| |||| ||||| || |
Sbjct: 101 ttaatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggca 42
Query: 129 atactaaaatgacttacattgggaaacggaggaagta 165
|| ||| ||||||||||||| |||||||||| ||||
Sbjct: 41 atgctagaatgacttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| ||||||||||||||||| | |||||||| || ||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtt 63
Query: 73 aatgaatctaaacata 88
|||||||||| |||||
Sbjct: 64 aatgaatctagacata 79
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||| ||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 115 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 62
Score = 73.8 bits (37), Expect = 7e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatatt 56
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 111 tcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||| ||| |||| ||| ||| ||||||||| |||| |||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
||||||||||||||| | ||| |||||||||||||||||| |||||||||| |||||
Sbjct: 60 atcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagtac 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||| | ||| ||||||||||||| |||| |||||||||||||||
Sbjct: 67 atcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||| ||||||||| |||||||| ||| ||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||||||||||||| |||||||| ||| ||| |||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatatt 70
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||||||||||||| |||||||||||| ||| | ||| || ||||||||||||
Sbjct: 14 cgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatcta 73
Query: 83 aacatatat 91
||| ||||
Sbjct: 74 gacagatat 82
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 18 cccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||| ||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||||||||||||| |||| |||||||| ||||||
Sbjct: 38 ctaaaatgacttatattgtgaaacggaagaagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| ||||||||||||| | |||||| || |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 74 atgaatcta 82
|||||||||
Sbjct: 70 atgaatcta 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||||||| |||| |||||||||||||||||||||| ||||||||| |||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
|||||||||||||||||| |||||||||||||||
Sbjct: 97 ctaaaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||| ||||||||||||| |||| | ||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcat 42
||||||||| ||||||||||| ||||||||
Sbjct: 127 ctactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 137 tctactccctccgtttcataatgtaagtcattctagcatttcccacattcatatt 83
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| ||||||||||||| |||||||||| ||||
Sbjct: 80 atcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||| ||| |||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 133 taaaatgacttacattgggaaacggaggaagtac 166
||||||||||||||||| |||||||||| |||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagtac 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||||||||| ||||||||| ||| |||| ||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcatt 43
|||||||| ||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata 70
||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||| ||
Sbjct: 117 atctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatg 58
Query: 71 ttaatgaat 79
|||||||||
Sbjct: 57 ttaatgaat 49
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcat 63
|||||||| ||||||||||| |||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| | || ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 59 atcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagta 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 123 tggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||| ||| ||| |||||||||||||| |||||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||||||||||||||||||||||||| || |||||||||
Sbjct: 14 cgtttcacaatataagtcattctagcatttcccatattcatatt 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
||||| ||| |||| ||| ||| ||||||||| |||| ||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||||||||||||| ||||||||| | ||||||||| || |||||||||||
Sbjct: 123 cgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatcta 64
Query: 83 aacatatat 91
||||||||
Sbjct: 63 gacatatat 55
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagt 164
|||||||| |||| || ||| ||||||||||||| |||| ||||||||||||||
Sbjct: 77 atcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacggaggaagt 131
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 gtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||||| |||||||||||||||||| | |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatatt 73
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||||||||||||| |||||||| ||| ||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| ||| ||||||||||||||| ||||||||||| || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 74 atgaat 79
||||||
Sbjct: 86 atgaat 81
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||
Sbjct: 60 atcaatataaatatgaaaaatactagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| ||||||||||| ||||||||||||| |||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatatt 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| || | ||||||| |||||||||||||| |||||||||| ||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| |||||| ||| ||||||||| || ||||||||||||| |||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatatt 91
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
||||||||||||||| | ||||||| ||||||||| |||| ||||||||||||||||
Sbjct: 60 atcaatataaatatgagaaatactagaatgacttatattgtgaaacggaggaagtac 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||||||||||||||||| |||| ||| ||| ||||| || ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||||||||||||||||| | ||||| || |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 74 atgaatcta 82
|||||||||
Sbjct: 70 atgaatcta 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| ||||| ||||| ||||||||||||| |||| ||||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||||||||
Sbjct: 101 aatgacttacattgtgaaacggaggaagta 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 128 aatactaaaatgacttacattgggaaacggaggaagtac 166
||||||| |||||||||||||| ||||||||| |||||
Sbjct: 42 aatactagaatgacttacattgttaaacggagggagtac 4
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||| |||||||||||| || ||||||||| || |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 74 atgaatcta 82
|||||||||
Sbjct: 74 atgaatcta 66
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| ||||||| ||| |||||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
||||| ||||||| ||| ||| || ||||||||||| |||||||||||||||||
Sbjct: 82 aatatgaatatggaaaatgctagaaggacttacattgtgaaacggaggaagtact 136
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 74 atgaatct 81
||||||||
Sbjct: 65 atgaatct 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||| |||||||||||||||||| |||||||||||| || |||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 74 at 75
||
Sbjct: 77 at 76
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| |||||||| |||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 54.0 bits (27), Expect = 7e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcat-tctagcatttttcacattcatatt 66
||||||||| ||||||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 144 ctactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatatt 90
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaa-atgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||||| ||||||||||||| |||||||||| ||||
Sbjct: 87 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 143
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 126/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | |||||| ||| ||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 74 atgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| |||||||| | | ||||||| | || ||| |||| |||||||| | ||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
||| || | ||||||||| |||||||||| |||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 88 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| |||||||| |||||||||||| || ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 74 atgaatcta 82
|||||||||
Sbjct: 83 atgaatcta 75
Score = 54.0 bits (27), Expect = 7e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcat-tctagcatttttcacattcatatt 66
||||||||| ||||||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatatt 58
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaa-atgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||||| ||||||||||||| |||||||||| ||||
Sbjct: 61 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 36 aagtcattctagcatttttcacattcatatttatattaatgaatctaaacatatat 91
||||||||||||||||| |||||||||||| || |||||||||||| ||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatat 55
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatcta 47
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| ||||||||| |||||||| |||||||||||| || ||
Sbjct: 135 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 73 aatgaatc 80
||||||||
Sbjct: 75 aatgaatc 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 79 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||| | ||||||||||| ||||||||| | ||||||| ||||||||||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatatt 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 134 aaaatgacttacattgggaaacggaggaagtactga 169
|||||||||||||||| |||||||| | ||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggatggagtactga 1
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||| ||| ||||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 74 atgaatctaaacata 88
|| ||| || |||||
Sbjct: 65 ataaatttatacata 79
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| |||||||| ||| |||||||||||| ||||| |||||||||||||||
Sbjct: 81 atcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaagta 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 123 tggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||| ||||||| ||| |||||||||| ||||||||||||||||
Sbjct: 47 tgggaaatactagaataacttacattgtgaaacggaggaagtac 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||| |||||||| || ||||||||| || |||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 74 atgaatctaaacat 87
|| |||||| ||||
Sbjct: 76 ataaatctagacat 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata 70
|||| ||| ||||||||||| ||||| ||||||| |||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattcacatttata 61
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||| ||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 79
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||| ||| |||| ||| ||| |||||||||||||| |||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 126/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| |||| | |||||||||| ||| |||||||| || ||
Sbjct: 159 ctactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtt 100
Query: 73 aatgaatct--aaacatatatctatttaaattcctcaatatcaatataaatatggggaat 130
||||||||| | |||||||| | | || |||| | || ||| |||| ||| |||| |||
Sbjct: 99 aatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
|||| || |||||||||| |||||||||||||||
Sbjct: 39 actagaaagacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||||| |||||| ||| ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacatt 60
|||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttt 53
||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgcaagtcattctagcatttt 44
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagtac 166
|||||||||||||| |||||||||| |||||
Sbjct: 87 aatgacttacattgtgaaacggagggagtac 117
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 24 gtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
|||||| ||||||||||||||||||||||| |||||||||| | || |||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacattcatactgatgctaatgaatcta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||||||| ||||||| ||| ||||||||| |||||||| ||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatatt 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| ||||||||||||| |||||||||| ||||
Sbjct: 83 atcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcata 64
|||| ||| ||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcata 55
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||| ||| ||||||||||||| |||| |||||||||| | || |||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 74 atgaatctaaacatatat 91
|| |||||| | ||||||
Sbjct: 84 ataaatctagatatatat 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagta 165
||||||||||||| |||||||||||||||
Sbjct: 34 aatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| | |||||| | |||||||||| ||||||||||| ||| ||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 73 aatgaatctaaacatatat 91
|||||||||| ||||||||
Sbjct: 73 aatgaatctagacatatat 55
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||| ||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 14 cgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatctg 73
Query: 83 aacatatatctatttaaattcctcaatatcaatataaatatggggaatactaaaatgact 142
|||||||| | || |||| | | |||| ||| ||| |||| ||| ||| |||||||
Sbjct: 74 gacatatatgtggctagattcattagtatctataagaatgtgggcaatcctagaatgact 133
Query: 143 tacattgggaaacggaggaagta 165
|| |||| |||||||||| ||||
Sbjct: 134 tatattgtgaaacggagggagta 156
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| ||| |
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 97 aatgaatcta 88
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||| |||||| || ||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 74 atgaat 79
||||||
Sbjct: 65 atgaat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||||||| |||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 81 atcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtact 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||||||| ||| || |||||||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||||||||||| |||||||||||| ||||| ||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 74 at 75
||
Sbjct: 48 at 47
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||| || ||||||| |||||||| ||||| |||||||||||||||
Sbjct: 50 aatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattcta 46
|||||||| ||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatt 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| || |||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 60 atcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||||||| ||||| ||||| ||| ||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcattt 69
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| ||||||||| || ||||| |||||||||||| || ||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||| ||||||||||||||||||||||||| | ||||||||| || |||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 74 atgaatcta 82
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/153 (81%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 15 actcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatattaa 74
||||||| ||||||| ||| |||||||||||||||||| ||||||||||| | |||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 75 tgaatctaaac--atatatctatttaaattcctcaatatcaatataaatatggggaatac 132
|||||||| || |||||||||| || |||| || || |||| ||||| || ||| |
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 133 taaaatgacttacattgggaaacggaggaagta 165
|| ||||||||||||| |||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||||||||||||||||| |||| || ||| ||||| | ||
Sbjct: 140 ctacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtt 81
Query: 73 aatgaatctaaacatata 90
|||||||||| |||||||
Sbjct: 80 aatgaatctagacatata 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcata 64
|||| ||| ||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 128 aatactaaaatgacttacattgggaaacggaggaagta 165
||||||| |||||||||||||| |||||||||||||||
Sbjct: 42 aatactagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagta 165
||||||||| |||| |||||||||||||||
Sbjct: 110 aatgacttatattgtgaaacggaggaagta 139
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| ||||||||||||||| ||||||||| |||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagca-ttttcacatccatattgatgtta 63
Query: 74 atgaat 79
||||||
Sbjct: 64 atgaat 69
Score = 60.0 bits (30), Expect = 1e-08
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 18 cccttcgtttcacaatataagtcattctagcatttttcacattcat 63
|||| ||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagca-ttttcacattcat 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagtac 166
|||||||||||||| ||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| ||||||||||||| |||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 74 atgaat 79
||||||
Sbjct: 65 atgaat 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 92
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 89 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| ||||||||| || ||||| |||||||||||| || ||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 87 aatgaatcta 78
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| |||| ||||||||||||||||||||||||| | ||||||||| || |||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcata 64
||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 98 atctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 123 tggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||| ||| ||| |||||||||||||| |||||||||||||||
Sbjct: 53 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcat 63
|||||||| ||||||||||| ||| |||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 22 tcgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaat 79
||||| |||||| |||||||| |||||||| |||||||||||| || ||||||||
Sbjct: 106 tcgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
||||| ||| |||| ||| |||||||||||||||||| ||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||||||||||||||||| |||||| ||| | || |||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 74 atgaa 78
|||||
Sbjct: 61 atgaa 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatattt 67
|||| ||| ||||||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattt 58
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| ||||||||||||||||| |||||||||||| || ||
Sbjct: 4 ctacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtt 63
Query: 73 aatgaa 78
||||||
Sbjct: 64 aatgaa 69
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||||||| ||||| |||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattct 45
|||||||||||||||||||||| ||||||||||
Sbjct: 102 tctactcccttcgtttcacaatgcaagtcattct 69
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| | ||||||||| ||| ||||| |||||||||||| ||| ||||| ||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 74 atgaatcta 82
|||||||||
Sbjct: 46 atgaatcta 38
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 109 tatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||||| ||| ||||||||| |||||||| |||| ||||| |||||
Sbjct: 50 tatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatggagggagtac 107
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||||||||||| |||||||||||||||| ||||| ||||||| |||| | ||||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 74 atgaatcta 82
||||||||
Sbjct: 65 gtgaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcattt 52
||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 129 ctactccctccgtttcataatgtaagtcattctagcattt 90
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||| ||| ||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatatt 41
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||||||| || | ||| ||| ||||||||| |||| ||||||||||||||
Sbjct: 38 atcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcatt 43
||||| || |||||||||||||||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattca 62
|||||||| ||||||||||||||||| |||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattca 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcac 57
|||| ||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctcac 83
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||||||||
Sbjct: 97 aatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| |||||| | ||||||| ||| |||||||||| |||||||||||||||
Sbjct: 60 atcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| |||||||| ||||||| ||||||||||||| |||||||||| ||||
Sbjct: 81 atcaatatgaatatgggaaatactagaatgacttacattatgaaacggagggagta 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatat 71
|||||||||| ||||||| ||| ||||||||||||| |||| || ||||||||| ||
Sbjct: 138 tctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgc 79
Query: 72 taatgaatcta 82
|||||||||||
Sbjct: 78 taatgaatcta 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||| ||| ||||||||||| ||||| ||||||| |||| ||| |||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatatt 57
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttt 53
|||||||| ||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcatttt 44
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcattt 52
||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 147 ctactcccttcgtttcataatgtaagtcattctagcattt 108
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 125/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| |||||| ||| ||||||||| |||||||||||||||||| | || ||
Sbjct: 159 ctactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtt 100
Query: 73 aatgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaat 130
| |||||||| |||||||| || ||| |||| || ||| |||| |||||| | |||
Sbjct: 99 agtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaat 40
Query: 131 actaaaatgacttacattgggaaacggaggaagta 165
||| ||||||||||||| |||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||||||||||||||||| ||| ||| |||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 74 atgaatctaa 83
|||||||||
Sbjct: 65 gtgaatctaa 74
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||||| ||| ||| |||||||||||||| | |||||||| ||||
Sbjct: 60 atcaatataaatatgggaaatgctataatgacttacattgtggaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 12 tctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||| ||| ||||||||||| |||| ||||||||||||| ||||||||||||
Sbjct: 134 tctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatatt 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 110 atcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| |||| ||| ||| |||| ||||||||| |||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||| |||||| ||||||||| |||||||| || ||| ||||| || ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 74 atgaatctaaacat 87
||||||||| ||||
Sbjct: 65 atgaatctagacat 78
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| ||||||||||| |||||||||||||||||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||||||| ||||||||||| ||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcattt 111
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| |||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatat 65
||||||||||| |||||||||||||||||| |||||| ||||
Sbjct: 97 cgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 115 tataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||| |||| ||| ||| |||||||||||||| |||||||||| ||||
Sbjct: 99 tataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacgg 157
|||||||| |||| ||| ||| |||||||||||||| |||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| ||||||| ||| |||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||| | ||| |||||||||||| |||||| ||||||| ||| || |||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 74 atgaatctaaacatata 90
|||||||| |||||||
Sbjct: 78 gtgaatctagacatata 62
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||||||| ||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatt 51
|||||||| ||||||||||| ||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 123 tggggaatactaaaatgacttacattgggaaacggaggaagtac 166
|||| ||| ||| |||||||||||||| |||||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| ||||| ||||||||||| | ||||||||||| || |||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 74 atgaatctaaacata 88
|| |||||| |||||
Sbjct: 77 ataaatctagacata 63
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 25 tttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatctaaa 84
||||| ||| ||||||||||||||||| ||||||||||| || |||||||||||| |
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 85 catatat 91
|||||||
Sbjct: 61 catatat 55
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatt 51
|||||||| ||||||| ||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||||||| ||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 111 tcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagtactg 168
|||||||||| |||| ||| ||| |||||||||||||| |||||||||| |||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtactg 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 23 cgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||||||||||||
Sbjct: 95 cgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | |||||||||| ||| || ||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 74 atgaatctaaacatatatctattt--aaattcctcaatatcaatataaatatggggaata 131
||||||||||||| ||| ||| | | |||| | || ||| | || |||||||| |||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
|||||| | ||||||||| |||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 23 cgtttcacaatataagtcattctagcatttt 53
|||||||||||||||||||||||||||||||
Sbjct: 80 cgtttcacaatataagtcattctagcatttt 50
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagta 165
||||||||||| || |||||||||||||||
Sbjct: 34 aatgacttacactgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
||||||||| |||||||||| ||||||||||||||| || ||||||||||||
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatatt 71
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| ||||||||| ||||| ||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 74 atga 77
||||
Sbjct: 65 atga 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctaaaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 126/157 (80%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | || ||| ||| | ||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 74 atgaatctaaacata--tatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| ||||| ||| ||| || ||| | || ||| |||| |||||||| ||||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtactg 168
||| || | |||| ||| |||||||||| |||||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagtactg 2
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||| | |||||||||| | ||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||| | |||||||||| | ||||||||||| || ||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 73 aatgaatcta 82
||| ||||||
Sbjct: 81 aataaatcta 72
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||||||| |||| | | |||||||| |||||||||||| || ||
Sbjct: 4 ctactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 126/157 (80%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | || ||| ||| | ||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 74 atgaatctaaacata--tatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| ||||| ||| ||| || ||| | || ||| |||| |||||||| ||||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagtactg 168
||| || | |||| ||| |||||||||| |||||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagtactg 161
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||||||| |||| | |||||||||| |||||| ||||| || |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 74 atgaatctaaaca 86
|||||||||||||
Sbjct: 98 atgaatctaaaca 86
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 74 atgaatctaaacatata 90
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 114 atataaatatggggaatactaaaatgacttacattgggaaacggaggaagtact 167
|||| ||| |||| ||| ||| || |||||||||| |||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagtact 3
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 129 atactaaaatgacttacattgggaaacggaggaagta 165
|||||| |||||||||||||| |||||||||||||||
Sbjct: 41 atactagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 23 cgtttcacaatataagtcattctagcattt 52
||||||||||| ||||||||||||||||||
Sbjct: 80 cgtttcacaatgtaagtcattctagcattt 51
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 115 tataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||| | || ||| ||| |||||||||||||| ||||||||| |||||
Sbjct: 39 tataaatgtaggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctag 47
|||| ||| ||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcaca 58
|||| ||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
|||||||||||||||||| |||||||||| |||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggagggagtac 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||||||||
Sbjct: 79 aatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattc 61
||||| ||| ||||||||||| ||||||||||||||| ||| |||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagta 165
|||||||||||||| |||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | |||||||||| | || || ||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 74 atgaatctaaacatata 90
||||||||||| |||||
Sbjct: 98 atgaatctaaatatata 82
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatt 66
|||||||| | ||||| ||||||||||||||||||||||| || ||| |||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatatt 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacat 59
|||||||| ||||||| ||| ||||||||||||| ||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 128 aatactaaaatgacttacattgggaaacggaggaagta 165
||||||| ||||||||||||| |||||||||| ||||
Sbjct: 42 aatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 95 tttaaattcctcaatatcaatataaatatggggaatactaaaatgacttacattgggaaa 154
||||||||| | || ||| |||| ||||| | ||| |||||||| ||||||||| ||||
Sbjct: 67 tttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaa 126
Query: 155 cggaggaagtac 166
||||||||||||
Sbjct: 127 cggaggaagtac 138
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||||||| |||| | |||||||||| ||||||||| | || |||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 74 atgaatctaaacatat 89
||||||||||||||||
Sbjct: 65 atgaatctaaacatat 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttata--t 71
|||||||| ||||||||||| |||| | || ||||||| |||||| ||||| |||| |
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 72 taatgaatctaaaca 86
|||||||||||||||
Sbjct: 100 taatgaatctaaaca 86
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 124/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | |||||| ||| || |||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 74 atgaatctaaacatatat--ctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| |||||||| | | ||||||| | || ||| |||| |||||||| | ||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagtac 166
||| || | ||||||| | |||||||||| |||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagtac 4
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacatt 60
||||||| | ||||||| ||||||||||||| |||||||| |||||||
Sbjct: 92 ctactccatccgtttcataatataagtcattttagcatttctcacatt 45
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 136 aatgacttacattgggaaacggaggaagtac 166
|||||||||||||| ||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtac 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 95 tttaaattcctcaatatcaatataaatatggggaatactaaaatgacttacattgggaaa 154
||||||||| | || ||| |||| ||||| | ||| |||||||| ||||||||| ||||
Sbjct: 75 tttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaa 16
Query: 155 cggaggaagtac 166
||||||||||||
Sbjct: 15 cggaggaagtac 4
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 124/154 (80%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | ||||| |||| | ||||| |||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 74 atgaatcta--aacatatatctatttaaattcctcaatatcaatataaatatggggaata 131
||||||||| |||||| || ||| || |||| | |||||| | |||||| ||| |||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
|||||| | ||||||||| |||||||||||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| |||| | || ||||||| | |||||| || | |||||
Sbjct: 157 ctacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatt 98
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 97 aatgaatcta 88
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 24 gtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
|||||| |||||||||| |||||||||| ||| |||||||| || ||||||||||||
Sbjct: 15 gtttcataatataagtctttctagcattgctcatattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 54.0 bits (27), Expect = 7e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| | |||||| | |||||||||| ||||||||||| || ||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtt 63
Query: 73 aatgaatctaaacat 87
|||||||||| ||||
Sbjct: 64 aatgaatctagacat 78
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 7e-07
Identities = 123/155 (79%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||| ||| |||| | |||||||||| | ||||||||||| || ||
Sbjct: 157 ctacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtt 98
Query: 73 aatgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatac 132
|||||||||| ||| || || || |||| | || |||||||| ||||| || ||| |
Sbjct: 97 aatgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgc 38
Query: 133 taaaatgacttacattgggaaacggaggaagtact 167
|| || | |||||||| |||||||||| ||||||
Sbjct: 37 tagaaagtcttacattatgaaacggagggagtact 3
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 54.0 bits (27), Expect = 7e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| | |||||| | |||||||||| ||||||||||| || ||
Sbjct: 129 ctactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtt 70
Query: 73 aatgaatctaaacat 87
|||||||||| ||||
Sbjct: 69 aatgaatctagacat 55
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||||||||| |||||||||||| || |||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 36 aagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||||||||| |||||||||||| || |||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 77
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagc 48
|||||||| ||||||||||| ||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 123 tggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||| ||| ||| |||||||||||||| | |||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcattt 52
|||| ||| |||| |||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagtac 166
|||||||||||||| |||||||||| |||||
Sbjct: 65 aatgacttacattgtgaaacggagggagtac 95
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 54.0 bits (27), Expect = 7e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||||||| ||||||| ||| |||||||||||| ||| || || ||||| |||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatt 63
Query: 73 aatgaatctaaacatatatctat 95
|||||||||| || |||||||||
Sbjct: 64 aatgaatctagacttatatctat 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||| ||| ||||||| ||| ||||||||||||||||| | ||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 107 aatatcaatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||| |||| ||||||| |||| || ||||||||||||| |||||||||| ||||
Sbjct: 63 aatatctatatgcatatgggcaatattagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 136 aatgacttacattgggaaacggaggaagtac 166
||||||||||||| ||||||||||||||||
Sbjct: 107 aatgacttacattatgaaacggaggaagtac 137
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 24 gtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
|||||| | |||||| | |||||||||| | ||||||||||| ||| ||||||||||||
Sbjct: 125 gtttcatattataagactttctagcattgtccacattcatatatatgttaatgaatcta 67
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | || ||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 74 atgaatctaaacatatatctatt--taaattcctcaatatcaatataaatatggggaata 131
||||||||| ||| | || |||| || |||| | || ||| |||| ||| |||| |||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| || | |||||||| |||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||| | |||||||||| ||||||||||| || |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 74 atgaatctaaacatatat 91
||||||||| | ||||||
Sbjct: 98 atgaatctagaaatatat 81
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 123/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | || ||||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 74 atgaatctaaacatatatctatt--taaattcctcaatatcaatataaatatggggaata 131
||||||||| ||| | || |||| || |||| | || ||| |||| ||| |||| |||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 132 ctaaaatgacttacattgggaaacggaggaagta 165
||| || | |||||||| |||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||| | |||||||||| ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| | ||||||
Sbjct: 65 atgaatctagaaatatat 82
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| |||| | |||||||||| ||||| ||||| || ||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtt 63
Query: 73 aatgaatctaaaca 86
||||||||||||||
Sbjct: 64 aatgaatctaaaca 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatt 51
|||||||| ||||||||||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 122/154 (79%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | || ||||||| | | |||||| | || |||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 74 atgaatctaaacatatatctatttaaattcctcaatatcaatataaatatggggaatact 133
||||||||| |||||| | | | || |||| | || ||| |||| ||| |||| ||| ||
Sbjct: 96 atgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaatgct 37
Query: 134 aaaatgacttacattgggaaacggaggaagtact 167
| || |||||||||| |||||||||||||||||
Sbjct: 36 agaaagacttacattatgaaacggaggaagtact 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 120 atatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||||| ||| ||| ||||||||||||| |||||||||||||||
Sbjct: 50 atatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatt 51
||||||| ||| ||||||| ||| |||||||||||||||||
Sbjct: 2 atctacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||| ||| |||| | |||||||||| | ||||||||||| || |||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 74 atgaatctaaacat 87
||||||||| ||||
Sbjct: 72 atgaatctagacat 59
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| |||||| ||| |||| | || ||||||| ||||||||||| |||| |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 74 atgaatctaaacatatat 91
||||||||||||||||||
Sbjct: 98 atgaatctaaacatatat 81
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 52.0 bits (26), Expect = 3e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 44 ctagcatttttcacattcatatttatattaatgaatctaaacatatatctatttaaattc 103
||||||||| ||| |||||||| ||||||||||||||| | ||||||||| || ||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctaga-ttatatctatctagattc 33
Query: 104 ctcaatatcaatat 117
| |||||||||||
Sbjct: 32 attaatatcaatat 19
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 44 ctagcatttttcacattcatatttatattaatgaatcta 82
||||||||| ||| |||||||| |||||||||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatcta 39
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| ||| |||| | |||||||||| | |||||||||| || |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | |||||| || | ||||||||||| || |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 74 atgaatctaaaca 86
|||||||||||||
Sbjct: 98 atgaatctaaaca 86
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 42 ttctagcatttttcacattcatatttatattaatgaatctaaacat 87
|||||||||| | ||||||||||| ||| |||||||||||| ||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacat 54
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 113 aatataaatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
||||| ||| |||| ||| ||| ||| |||||||||| |||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 140 acttacattgggaaacggaggaagta 165
|||||||||| |||||||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | |||||||||| ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 74 atgaatcta 82
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 55 cacattcatatttatattaatgaatctaaacatatat 91
||||||||||| ||| |||||||||||| ||||||||
Sbjct: 12 cacattcatatatatgttaatgaatctagacatatat 48
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttttcacattcatatttatattaatgaatc 80
||||||||||||||||| |||||||||||| || |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 39 tcattctagcatttttcacattcatatttatattaatgaatc 80
|||||||||||||| |||||||||||| || |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | |||||||||| | ||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 74 atgaatcta 82
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| | |||||| | |||||||||| ||||||||||| || |||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 74 atgaatcta 82
|||||||||
Sbjct: 100 atgaatcta 92
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| | |||||| | |||||||||| ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 74 atgaatctaaacatatat 91
||||||||| | ||||||
Sbjct: 65 atgaatctatatatatat 82
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||||||| |||| | |||||||||| ||||||||||| || ||
Sbjct: 135 ctacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtt 76
Query: 73 aatgaatctaaacatat 89
||| |||||| ||||||
Sbjct: 75 aataaatctagacatat 59
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
|||||||| ||||||| | | |||| | |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| | |||||| | |||||||||| ||||||||||| || |||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 74 atgaatcta 82
|||||||||
Sbjct: 99 atgaatcta 91
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 10 catctactcccttcgtttcacaatataag 38
|||||||||||| ||||||||||||||||
Sbjct: 158 catctactccctccgtttcacaatataag 130
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | |||||||||| ||||||||||| || |||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 74 atgaatcta 82
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 40 cattctagcatttttcacattcatatttatattaatgaatctaaacat 87
|||||||||||||| ||||||||||| | |||||||||||| ||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacat 48
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 24 gtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatctaa 83
|||||| | |||||| | |||||||||| ||||||||||| || |||||||||||||
Sbjct: 122 gtttcatattataagactttctagcattgcccacattcatatagatgttaatgaatctaa 63
Query: 84 aca 86
|||
Sbjct: 62 aca 60
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatt 72
||||| ||| ||||||| | |||||| | |||||||||| ||||||||||| || |
Sbjct: 159 ctacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgct 100
Query: 73 aatgaatctaaacatatat 91
|||||||||| ||||||||
Sbjct: 99 aatgaatctagacatatat 81
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattcat 63
||||| ||| |||| ||||||||||| | |||||||||| ||||||||||
Sbjct: 139 ctacttcctccgttccacaatataagactttctagcattactcacattcat 89
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 24 gtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatctaa 83
|||||| | |||||| | |||||||||| ||||||||||| || |||||||||||||
Sbjct: 122 gtttcatattataagactttctagcattgcccacattcatatagatgttaatgaatctaa 63
Query: 84 aca 86
|||
Sbjct: 62 aca 60
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 119 aatatggggaatactaaaatgacttacattgggaaacggaggaagta 165
|||||||| ||| ||| || | ||||||||| |||||||||||||||
Sbjct: 51 aatatgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 11 atctactcccttcgtttcacaatataagtcattctagcatttttcacattcatat 65
||||||||||| ||||| ||||| |||| | |||||||||| ||| ||||||||
Sbjct: 111 atctactccctccgttttacaatgtaagactttctagcattgctcatattcatat 57
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| | |||||| | ||||| |||| ||||||||||| || ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 78 atgaatctagacatatat 61
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 23 cgtttcacaatataagtcattctagcatttttcacattcatatttatattaatgaatcta 82
||||||||||| |||| | |||||||||| ||||||||||| ||| |||||||| ||
Sbjct: 117 cgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaattta 58
Query: 83 aacata 88
|||||
Sbjct: 57 gacata 52
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||| ||| |||| | |||||||||| ||||||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 74 atgaat 79
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| | |||||| | ||||| |||| ||||||||||| ||| | |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 74 atgaatctaaacatatat 91
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 17 tcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatattaatg 76
||||| ||||||| ||| |||| | |||||||||| | ||||||||||| || |||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 77 aatcta 82
||||||
Sbjct: 45 aatcta 40
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatt 51
|||||||| ||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcatt 42
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||||||| ||||||||||| |||| | ||||| |||| ||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 74 atgaatctaaacat 87
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 141 cttacattgggaaacggaggaagtac 166
||||||||| ||||||||||||||||
Sbjct: 29 cttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 13 ctactcccttcgtttcacaatataagtcattctagcatttttcacattca 62
||||| ||| ||||||||||| |||| | |||||||||| |||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgctcacattca 53
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 42 ttctagcatttttcacattcatatttatattaatgaatctaaacatatat 91
|||||||||| ||||||||||| ||| |||||||||||| | ||||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatat 58
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatttttcacattcatatttatatta 73
|||| ||| ||||||| | |||||| | |||||||||| ||||||||||| || |||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 74 atgaatctaaacat 87
||||||||| ||||
Sbjct: 66 atgaatctagacat 53
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 128 aatactaaaatgacttacattgggaaacggaggaagta 165
||||||| || | ||||||||| |||||||||||||||
Sbjct: 42 aatactataaagtcttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tactcccttcgtttcacaatataagtcattctagcatt 51
|||||||| ||||||||||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
