miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 119 bits (60), Expect = 1e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 78 atgaatctagacatatatat 59
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||| ||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||
Sbjct: 5 tacttcctccgttttatattataagactatctagtattgcccacattcatatatatat 62
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| ||||||| |||||||| |||| |||||||| ||||| || ||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 65 aatgaatctagacatatatatgaatgtg 92
||||||||||||||||||||||||||||
Sbjct: 73 aatgaatctagacatatatatgaatgtg 46
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatata 58
|||| ||||||||||||||||||| |||||||| ||| |||||||| |||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatata 57
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||| |
Sbjct: 159 ctacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgct 100
Query: 65 aatgaatctagacatatatatg 86
||||||||||||||||||||||
Sbjct: 99 aatgaatctagacatatatatg 78
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||||||||| |||||||| ||||||||||| | |||||||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 66 atgaatctagacatatatat 85
||||| ||| ||| ||||||
Sbjct: 65 atgaacctatacacatatat 84
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 6e-25
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||||||||| |||||||||||||||||||||| ||||| || | |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 66 atgaatctagacatatatatg 86
|||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatg 85
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||||||||| |||||||| |||| ||| || |||||||| | |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 66 atgaatctagacatatatat 85
||||||||| ||| ||||||
Sbjct: 98 atgaatctaaacacatatat 79
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 113 bits (57), Expect = 6e-25
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
||||||||| |||||||| | ||| |||||||| ||||| ||||||| |||||||| |||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 66 atgaatctagacatatatatgaatgtgaacaatgcta 102
|||||||||||||| |||||||||||| |||||||||
Sbjct: 72 atgaatctagacatctatatgaatgtggacaatgcta 36
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 91/102 (89%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||| ||||||||||| | | ||| |||||||| ||||||||||||| ||||||||
Sbjct: 137 aactacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatg 78
Query: 63 ttaatgaatctagacata--tatatgaatgtgaacaatgcta 102
||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 77 ttaataaatctagacatatctatatgaatgtgaacaatgcta 36
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||||| ||| |||||||| ||||| |||||| ||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagatat 62
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 107 bits (54), Expect = 4e-23
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatctagacat--atatatgaatgtgaacaatgctangaaatcttataa 115
| |||||||| ||| ||||||||||||| |||||||| || ||||||||
Sbjct: 65 acgaatctaggcatacatatatgaatgtgggcaatgctagaaagtcttataa 116
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatata 58
|||| ||||| ||||| ||||||| |||||||| ||||||||||||| |||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 66 atgaatctagacat 79
||||||||||||||
Sbjct: 66 atgaatctagacat 53
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatt 52
|||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacatt 51
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 66 atgaatcta 74
|||||||||
Sbjct: 100 atgaatcta 92
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatctagacatatat 83
||||||||| | ||||||
Sbjct: 65 atgaatctatatatatat 82
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 103 bits (52), Expect = 6e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| | |
Sbjct: 3 actactccctccgtttcatattataagactttctagcattgcccacattcatatatacgt 62
Query: 64 taatgaatctagacat 79
||||||||||||||||
Sbjct: 63 taatgaatctagacat 78
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattg 44
|||| ||||| ||||||||||||| |||||||| |||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattg 90
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 103 bits (52), Expect = 6e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| | |
Sbjct: 130 actactccctccgtttcatattataagactttctagcattgcccacattcatatatacgt 71
Query: 64 taatgaatctagacat 79
||||||||||||||||
Sbjct: 70 taatgaatctagacat 55
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattg 44
|||| ||||| ||||||||||||| |||||||| |||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattg 43
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 103 bits (52), Expect = 6e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| ||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 66 atgaatctagacatat 81
||||||||||| ||||
Sbjct: 99 atgaatctagatatat 84
Score = 83.8 bits (42), Expect = 6e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt- 64
|||||||||||||||||||||||| |||||||| |||| |||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 65 aatgaatctagaca 78
||| ||||||||||
Sbjct: 65 aattaatctagaca 78
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 2e-21
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| |||| |||||||||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 66 atgaatctagacatatatatgaatgtgaacaatgctangaaatcttataa 115
||||||||| ||| | || |||||||| |||||||| || ||||||||
Sbjct: 72 atgaatctaaacacacatgtgaatgtgggcaatgctagaaagtcttataa 23
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatt 52
|||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 3 actactccctccgtttcatattataagactttctagcattgcccacatt 51
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 95.6 bits (48), Expect = 1e-19
Identities = 98/115 (85%), Gaps = 5/115 (4%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||||||||| |||||||| ||||| ||||||| | |||||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 66 atgaatctagacata-----tatatgaatgtgaacaatgctangaaatcttataa 115
|| |||||||||| | |||||||||||| ||||||||| || ||||||||
Sbjct: 65 ataaatctagacacaacatctatatgaatgtggacaatgctagaaagtcttataa 119
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagat 82
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 93.7 bits (47), Expect = 6e-19
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| |||| |||||||||||||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 66 atgaatctagacatatatatgaatgtgaacaatgctangaaatcttataa 115
||||||||| ||| | | |||||||| |||||||| || ||||||||
Sbjct: 72 atgaatctaaacacacacgtgaatgtgggcaatgctagaaagtcttataa 23
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatt 52
|||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 3 actactccctccgtttcatattataagactttctagcattgcccacatt 51
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||||| | ||| |||||||| |||||| || ||| ||||||||
Sbjct: 161 aactactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatg 102
Query: 63 ttaatgaatctagacatatatat 85
|||||||||||||||| ||||||
Sbjct: 101 ttaatgaatctagacacatatat 79
Score = 89.7 bits (45), Expect = 9e-18
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| ||||||| |||||||||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 66 atgaatctagacatatatatg 86
|||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatg 85
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| |||| |||||||| | ||| |||||||| | ||||||||||||||||||||| ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 66 atgaatctagacatatat 83
||||||||||||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| ||||||||||||| ||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 66 atgaatctag 75
||||||||||
Sbjct: 98 atgaatctag 89
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| |||||||||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 66 atgaatctagacatatat 83
||||||||||||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| | |||||| ||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 66 atgaatctagaca 78
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||||||||||||||||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 66 atgaatctagacat 79
||||||||||||||
Sbjct: 98 atgaatctagacat 85
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| ||||| || |||| |||||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 66 atgaatcta 74
|| ||||||
Sbjct: 65 ataaatcta 73
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 66 atgaatctagacatatat 83
||||||||||| ||||||
Sbjct: 98 atgaatctagaaatatat 81
Score = 73.8 bits (37), Expect = 5e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| ||||| || |||| | |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatctagacatatat 83
||||||||||| ||||||
Sbjct: 65 atgaatctagaaatatat 82
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| ||||| || |||||| |||||| |||||||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 98 atgaatctagaca 86
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 89.7 bits (45), Expect = 9e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||||||||| || ||||||||||||| |||||||| |||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 66 atgaatctagaca 78
|||||| ||||||
Sbjct: 82 atgaatttagaca 70
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||||||||||||||| | ||| |||||||| ||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagat 60
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 89.7 bits (45), Expect = 9e-18
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| ||||||| ||||||||||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatctagacatata 82
|||||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgc 45
|||||||||||||||||| | ||| |||||||| ||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcattgc 83
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 89.7 bits (45), Expect = 9e-18
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatctagaca 78
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||||||||||||||| | ||| |||||||| ||||||||||||| ||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagat 87
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 89.7 bits (45), Expect = 9e-18
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||| | | ||||| ||||||||||||||||||||| ||||||||| ||
Sbjct: 135 ctactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtt 76
Query: 65 aatgaatctagacatatatat 85
|||||||||| ||| ||||||
Sbjct: 75 aatgaatctaaacacatatat 55
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 9 tccctccgtttcatattataaaactttctaacattgcccacatttatata 58
||||||||||||||| ||||| |||||||| |||||||||||| ||||||
Sbjct: 8 tccctccgtttcataatataagactttctagcattgcccacatctatata 57
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 9e-18
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||| | | ||| ||||| |||||||||||||||| | ||||||
Sbjct: 161 aactactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatg 102
Query: 63 ttaatgaatctagacatatat 83
|||||||||||||| ||||||
Sbjct: 101 ttaatgaatctagatatatat 81
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||| | | ||| |||| ||| |||||| |||||| |||||||| |
Sbjct: 3 actactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgt 62
Query: 64 taatgaatctagaca 78
|||||||||||||||
Sbjct: 63 taatgaatctagaca 77
Score = 44.1 bits (22), Expect = 5e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 76 acatatatatgaatgtgaacaatgctangaaatctta 112
|||| ||||||||||||| |||||||| ||| |||||
Sbjct: 62 acatctatatgaatgtgagcaatgctaggaagtctta 26
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| |||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 66 atgaatcta 74
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%), Gaps = 5/69 (7%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||||||||| |||| |||||||||||| |||||||| |||
Sbjct: 155 tacttcctccgtttcatattataagactta-----attgcccacattcatatagatgtta 101
Query: 66 atgaatcta 74
|||||||||
Sbjct: 100 atgaatcta 92
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| ||||||||||||| |||||||| |||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 66 atgaatcta 74
|||||||||
Sbjct: 80 atgaatcta 72
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 13 tccgtttcatattataaaactttctaacattgcccacatttatatagatattaatg 68
||||||||||| | ||| |||||||| ||||||| ||||| |||||||| ||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaatg 67
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | |||||||||| |||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| |||| |||||||||||||| |||||||| ||||| ||||||| ||||| || |||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgtta 76
Query: 66 atgaatctag---acatatatatgaatgtg 92
|||||||||| |||||||||||||||||
Sbjct: 75 atgaatctagacaacatatatatgaatgtg 46
Score = 52.0 bits (26), Expect = 2e-06
Identities = 95/116 (81%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||| |||||||||| |||||||| |||||||| |||| |||||||| ||||| ||
Sbjct: 2 aactacttcctccgtttcttattataagactttctagcattacccacattcatatatatg 61
Query: 63 ttaat--gaatc-tagacatatatatgaatgtgaacaatgctangaaatcttataa 115
|| || || | ||||||||||||||||| ||||||||| || ||||||||
Sbjct: 62 ttgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataa 117
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
||||| |||||||||||| | ||| |||||||| ||||| ||| |||||||||||| |||
Sbjct: 137 tactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtta 78
Query: 66 atgaatctagacata 80
|||||||||||||||
Sbjct: 77 atgaatctagacata 63
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 12 ctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||||||||| | ||| |||||||| ||||||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacatttatatagat 60
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 1e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatt 52
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacattgcccacatt 51
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| ||||||||||||||||||| |||||||| |||| |||| ||| ||||||||
Sbjct: 116 actacttcctccgtttcatattataagactttctagcattacccatattcatatagatga 57
Query: 64 taatgaat 71
||||||||
Sbjct: 56 taatgaat 49
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| |||||||| ||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 66 atgaatctagacatatat 83
||||||||||||||||||
Sbjct: 98 atgaatctagacatatat 81
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||| |||||||| | |||||| ||| |||||||| |||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 66 atgaatctagaca 78
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
||||||||| |||||||| | ||| ||||| || ||||||||||||| |||||||||| |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 66 atgaatctagacatatat 83
||||||||| ||||||||
Sbjct: 98 atgaatctaaacatatat 81
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| |||| |||||||| | ||| |||||||| | ||||||||||| ||||| || |||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| |||||||| ||||| | ||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 66 atgaatctagacatatat 83
||||||||||||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| ||| ||||||| |||||||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 66 atgaatcta 74
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| |||||||||||| |||||||| |||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 66 atgaatctag 75
||||||||||
Sbjct: 87 atgaatctag 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| ||||||||||| | | ||| |||||||| |||||| |||||| | ||||| |
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgt 62
Query: 64 taatgaatctagaca 78
|||||||||||||||
Sbjct: 63 taatgaatctagaca 77
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
|||||||||||| |||||||| | ||| |||||||| |||||||||||||| ||| |||
Sbjct: 2 aactactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatg 61
Query: 63 ttaatgaatctaga 76
||||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatat 57
|||| ||||| ||||||| | ||| |||||||| ||||||||||||| ||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| ||||| |||||||| |||||||| ||| |||||||| |||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 66 atgaatctagacatata 82
||||| ||||| |||||
Sbjct: 65 atgaacctagatatata 81
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| ||||| || |||| ||||||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 66 atgaatctagacatat 81
||||||||||||||||
Sbjct: 98 atgaatctagacatat 83
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| ||||||| ||||||||||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 63.9 bits (32), Expect = 5e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| ||||| || |||||| | ||| || ||||| |||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 66 atgaatctagacatat 81
||||||||||||||||
Sbjct: 96 atgaatctagacatat 81
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 2 taactactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||| ||||||||||||||| | ||| |||||||| ||||| ||||||| ||||||||
Sbjct: 112 taactattccctccgtttcataatgtaagactttctagcattgtccacattcatatagat 53
Query: 62 attaatgaatctagaca 78
|||| |||||||||||
Sbjct: 52 gttaacgaatctagaca 36
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | ||||| |||||||| |||| ||||||| |||||||| ||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 65 aatgaatctagacatat 81
|||||||||| ||||||
Sbjct: 77 aatgaatctaaacatat 61
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | ||||| |||||||| |||| ||||||| |||||||| ||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 65 aatgaatctagacatat 81
|||||||||| ||||||
Sbjct: 64 aatgaatctaaacatat 80
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||||| | ||| | |||||| |||||||| || |||||||||
Sbjct: 2 aactactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagata 61
Query: 63 ttaatgaatctagacatatat 83
||||||||||||||| |||||
Sbjct: 62 ttaatgaatctagacttatat 82
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| |||||| ||||||| ||||||||||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtta 64
Query: 66 atgaatctagacatatatatg 86
|| ||||||||||||||||||
Sbjct: 65 ataaatctagacatatatatg 85
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||| |||||| |||||||| ||||||||||||| ||||| || ||
Sbjct: 159 ctactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtt 100
Query: 65 aatgaatct 73
|||||||||
Sbjct: 99 aatgaatct 91
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| ||||| |||||||| |||||||| ||| |||||||| |||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 66 atgaatctagacatata 82
||||| ||||| |||||
Sbjct: 98 atgaacctagatatata 82
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| ||||| || |||| ||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 66 atgaatctagacatat 81
||||||||||||||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatata 58
|||||||||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatat 57
|||| ||||||||||||||||||| |||||||| |||||||||| |||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgcccacgtttatat 53
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 11 cctccgtttcatattataaaactttctaacattgcccacatttatatagatattaatgaa 70
||||||||||||| ||||| | ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 71 tctagacatatat 83
||| |||||||||
Sbjct: 70 tctggacatatat 82
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | ||||| | ||||| |||||||||||| |||||||| |
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 65 aatgaatctagacatatatatg 86
||||||||||| || |||||||
Sbjct: 97 aatgaatctagccacatatatg 76
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | ||||| |||| |||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 66 atgaatctagacatatatat 85
||||||||||| ||||||||
Sbjct: 98 atgaatctagatatatatat 79
Score = 44.1 bits (22), Expect = 5e-04
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| ||||||||||| | ||||| | ||||||| || ||||||| |||| || |
Sbjct: 3 actacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgt 62
Query: 64 taatgaatctagacatatatat 85
||||||||||||| | ||||||
Sbjct: 63 taatgaatctagataaatatat 84
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatatatgaat 89
||||| |||||| |||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 104 ttctagcattgcacacattcatatagatgttaatgaatctagacatatatatgaat 49
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| || ||||| ||| |||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatat 79
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| | ||| |||||||| ||||||||||||| | |||||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Query: 65 aatgaatctagacatatata 84
|||||||||||||| |||||
Sbjct: 64 aatgaatctagacacatata 83
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| |||||||| |||| |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 66 atgaatcta 74
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| ||||| |||||||| |||| |||| ||| |||||||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 80 atgaatctaga 70
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| |||| |||||||| ||||| ||||||| |||||| || ||| |||||||| |
Sbjct: 3 actacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgt 62
Query: 64 taatgaatctaga 76
|||||||||||||
Sbjct: 63 taatgaatctaga 75
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| ||||||||||||| | ||| |||||||| ||||| ||||||| ||||| || |
Sbjct: 158 actacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgt 99
Query: 64 taatgaatctagaca 78
|||||||||||||||
Sbjct: 98 taatgaatctagaca 84
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| ||||||| | ||| |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 66 atgaatctag 75
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||| | | ||| | ||||| |||| |||||||| |||| |||
Sbjct: 161 aactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 102
Query: 63 ttaatgaatctagacatatatat 85
|||||||||||||||||||||||
Sbjct: 101 ttaatgaatctagacatatatat 79
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| ||||||||||| | | ||| ||||| || ||||| |||||||||| |||||||
Sbjct: 158 actacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatat 99
Query: 64 taatgaatctagacatatatatg 86
||||||||||||| |||| ||||
Sbjct: 98 taatgaatctagatatatgtatg 76
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| ||||| ||||| ||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccaca--tatatagatgtta 62
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 63 atgaatctaga 73
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| |||||||| ||||| ||||||| |||||||| ||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 65 aatgaatctagaca 78
||| ||||||||||
Sbjct: 81 aataaatctagaca 68
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 26 ataaaactttctaacattgcccacatttatatagatattaatgaatctagacatatat 83
|||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatat 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 26 ataaaactttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
|||| |||||||| ||||||||| ||| ||||| || ||||||||||||| |||| ||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||||| | ||| | ||||| ||||||| | ||| ||||||||
Sbjct: 2 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 61
Query: 63 ttaatgaatctagacata 80
||||||||||||||||||
Sbjct: 62 ttaatgaatctagacata 79
Score = 50.1 bits (25), Expect = 8e-06
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| | ||| | ||||| || ||| |||||| |||| ||| ||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 65 aatgaatctagacatat 81
|||||||||||| ||||
Sbjct: 99 aatgaatctagatatat 83
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| ||||| | |||||||||| ||||||| |||| ||| ||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 65 aatgaatctagacatata 82
||||||||||||||||||
Sbjct: 80 aatgaatctagacatata 63
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| ||||||||| ||| || ||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 66 atgaatctagacatatatatg 86
|||||||||||||||| ||||
Sbjct: 98 atgaatctagacatatgtatg 78
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||| ||||||||||| | | ||| |||||||| |||||||||||| ||||| ||
Sbjct: 2 aactacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatg 61
Query: 63 ttaatgaatcta 74
||||||||||||
Sbjct: 62 ttaatgaatcta 73
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 31 actttctaacattgcccacatttatatagatattaatgaatctagacatatat 83
|||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 112 actttctaacattgcccacattcatatagatgcaaatgaatctagacatatat 60
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | | ||| |||||||| |||| ||||||| || ||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 66 atgaatctagacatatatatg 86
|||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatg 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgccc 47
||||||||||| ||||| | | ||||||||||| |||||||||
Sbjct: 130 ctactccctccatttcacaatgtaaaactttcttacattgccc 88
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 73.8 bits (37), Expect = 5e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | |||||| |||||||||||| || |||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 66 atgaatctagacatata 82
||||||||| |||||||
Sbjct: 65 atgaatctaaacatata 81
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| | ||||| |||| ||||||||||||| | | ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 65 aatgaatctagacatatatat 85
|||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatat 84
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
||||||||| |||||||| | |||| | ||||| |||||||||||| |||||||| |||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 66 atgaatctagacatatatatg 86
|||||||||||| | ||||||
Sbjct: 72 atgaatctagacgtctatatg 52
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 37 taacattgcccacatttatatagatattaatgaatctagacatatatat 85
|||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 2 taacattgcccacattcatatatatgttaatgaatctagacatatatat 50
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 40 cattgcccacatttatatagatattaatgaatctagacatatat 83
||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctagatatatat 43
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | | ||| |||||||| ||||||||| ||| || ||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 66 atgaatctagacatatatatg 86
|||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatgtatg 85
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| ||||||||| | |||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 66 atgaatcta 74
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 26 ataaaactttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
|||| |||||||| ||||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 86 g 86
|
Sbjct: 61 g 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 26 ataaaactttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
|||| |||||||| ||||||||||||| |||||||| ||||||||||||| || ||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 5e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| |||||||||||| || ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 66 atgaatctagacatata 82
|| ||||||||||||||
Sbjct: 98 ataaatctagacatata 82
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 31 actttctaacattgcccacatttatatagatattaatgaatctagaca 78
|||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 111 actttctaacattgcccacattcatatggatgttaatgaatctagaca 64
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 31 actttctaacattgcccacatttatatagatattaatgaatctagacatat 81
|||||||| ||||||||||||| |||| ||| |||||||||||||| ||||
Sbjct: 2 actttctagcattgcccacattcatatggatgttaatgaatctagatatat 52
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | |||||||||| |||||||| |||| ||| |||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 75 atgaatctaga 65
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 40 cattgcccacatttatatagatattaatgaatctagacatatatat 85
|||| ||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 39 catttcccacatttatattgatgttaatgaatctagacatatatat 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||| ||| | | ||| | ||||| |||| |||||||| |||| ||||||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 65 aatgaatctagacatatatat 85
|||||||||||| | ||||||
Sbjct: 99 aatgaatctagatagatatat 79
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||||| | ||| | ||||| ||||||| | ||| ||||||||
Sbjct: 161 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 102
Query: 63 ttaatgaatctaga 76
||||||||||||||
Sbjct: 101 ttaatgaatctaga 88
Score = 50.1 bits (25), Expect = 8e-06
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| | ||| | ||||| || ||| |||||| |||| ||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 65 aatgaatctagacatat 81
|||||||||||| ||||
Sbjct: 64 aatgaatctagatatat 80
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||| | | ||| ||||| || ||||||||| ||| || ||||| ||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtt 100
Query: 65 aatgaatctagacatatatatg 86
||||||||||||||||| ||||
Sbjct: 99 aatgaatctagacatatgtatg 78
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| |||||| || || ||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 66 atgaatcta 74
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 26 ataaaactttctaacattgcccacatttatatagatattaatgaatctag 75
|||| |||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 60.0 bits (30), Expect = 8e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 26 ataaaactttctaacattgcccacatttatatagatattaatgaatctagacat 79
|||| |||||||| ||||| ||||||| ||||| || |||||||||||||||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 76 acatatatatgaatgtgaacaatgcta 102
||||||||||||||||| |||||||||
Sbjct: 38 acatatatatgaatgtggacaatgcta 12
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||| | | ||| | ||||| |||| |||||||| ||| ||| |
Sbjct: 164 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgt 105
Query: 64 taatgaatctagacatatatat 85
||||||||||||||||||||||
Sbjct: 104 taatgaatctagacatatatat 83
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| |||||||||||||||| | | |||||| ||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtt 100
Query: 65 aatgaatctagacatatatatg 86
||||||||||||||||||||||
Sbjct: 99 aatgaatctagacatatatatg 78
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | || |||||||| |||| |||||||| || ||||| |||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 66 atgaatctagacatatatat 85
||||||||| ||| ||||||
Sbjct: 65 atgaatctaaacacatatat 84
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||| | | ||| | || || |||| |||||||| |||| ||| |
Sbjct: 3 actactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgt 62
Query: 64 taatgaatctagacatatatat 85
||||||||||||||||||||||
Sbjct: 63 taatgaatctagacatatatat 84
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| ||||||||| ||||| |||||| || ||||| |||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtta 65
Query: 66 atgaatcta 74
|| ||||||
Sbjct: 64 ataaatcta 56
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| | ||||| |||| |||| ||| |||||||| |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 98 atgaatctagaca 86
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| | ||| | ||||| |||||||||||| |||||||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 65 aatgaatctaga 76
||||||| ||||
Sbjct: 64 aatgaatttaga 75
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
||||||||| |||||| | | ||| |||||||| |||| |||||||| || ||||| |||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 66 atgaatctagacatatatatg 86
||||||||| |||||| ||||
Sbjct: 65 atgaatctaaacatatgtatg 85
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| | ||||| |||| || ||||| |||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| | ||||| |||||||||||| ||||||||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 66 atgaatctaga 76
|||||| ||||
Sbjct: 98 atgaatttaga 88
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||| |||||| |||| | ||| | |||||||||| |||||||| |||||| | |
Sbjct: 3 actactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgt 62
Query: 64 taatgaatctagacatatata 84
||||||||||||| |||||||
Sbjct: 63 taatgaatctagatatatata 83
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| ||||||| |||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 66 atgaatctagacatatatat 85
|||||||||||||| |||||
Sbjct: 98 atgaatctagacatctatat 79
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 2 taactactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||| ||||||||||||||| | ||| |||||||| |||| ||| ||| ||||||||
Sbjct: 1 taactattccctccgtttcataatgtaagactttctagcattaaccatattcatatagat 60
Query: 62 attaatgaatctagaca 78
|||| |||||||||||
Sbjct: 61 gttaacgaatctagaca 77
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||| | | ||| | |||||||||| |||| |||||||| ||
Sbjct: 160 aactactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatg 101
Query: 63 ttaatgaatctagacatatat 83
|||||||||||||| ||||||
Sbjct: 100 ttaatgaatctagatatatat 80
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatataga 60
|||||||||||||||||||||||||| ||||| || |||| ||||||| |||||||
Sbjct: 3 actactccctccgtttcatattataagactttatagcattatccacattcatataga 59
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatata 58
|||| ||||||||||||||||||| |||||||| |||| |||||||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatata 62
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatatatg 86
||||| |||| |||||||| |||| ||| ||||||||||||||||||||||||
Sbjct: 128 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatg 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 48 acatttatatagatattaatgaatctagacatatatatg 86
||||| |||| ||| ||||||||| ||||||||||||||
Sbjct: 47 acattcatattgatgttaatgaatgtagacatatatatg 85
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| | |||||||||| ||||||| |||| ||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 65 aatgaatctagacatatatat 85
|||||||||||||||||||||
Sbjct: 99 aatgaatctagacatatatat 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | ||||| | ||||| |||| | |||||| |||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 66 atgaatctagacatatatat 85
||||||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| | ||||| |||| |||||||| ||| ||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 65 aatgaatctagacatatatat 85
|||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatat 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | |||||||||| ||||||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 66 atgaatcta 74
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| |||||| |||||| ||||| |||||||| |||||||||| || | |||||| | |
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtca 99
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 98 atgaatctagaca 86
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| |||||||| || || ||||| |||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 66 atgaatcta 74
||| |||||
Sbjct: 65 atggatcta 73
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 13 tccgtttcatattataaaactttctaacattgcccacatttatatagatattaatgaatc 72
||||||||| | | ||| |||||||| ||||||||||||| |||| |||| ||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatt 60
Query: 73 tagacata 80
||||||||
Sbjct: 59 tagacata 52
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| | || || ||||||||||||| |||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 66 atgaatctagacatat 81
||||||||| ||||||
Sbjct: 98 atgaatctaaacatat 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||| ||||||||||||| | ||| | ||||| | || |||| || ||||||||
Sbjct: 2 aactacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatg 61
Query: 63 ttaatgaatctaga 76
||||||||||||||
Sbjct: 62 ttaatgaatctaga 75
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | |||||| ||| ||||||| |||| ||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 97 atgaatctagacatatatat 78
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 45 cccacatttatatagatattaatgaatctagacatatatat 85
|||||||| |||| |||||||||||||||||| | ||||||
Sbjct: 43 cccacattcatattgatattaatgaatctagatagatatat 83
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
||||| |||| |||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgccca 48
||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattgccca 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||||| ||||| |||||||| |||| ||||||| ||||| || |
Sbjct: 4 ctactccctccgtttcatactataagactttctagtattgtccacattcatataaatgct 63
Query: 65 aatgaat 71
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 63.9 bits (32), Expect = 5e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| | ||||| |||| |||||||| |||| |||||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 66 atgaatctagacatat 81
||||||||||| ||||
Sbjct: 55 atgaatctagatatat 40
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccac 49
|||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgcccac 44
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| ||| ||| | || || |||| | |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 66 atgaatctagacatatatat 85
|||||||||||||| |||||
Sbjct: 65 atgaatctagacatctatat 84
Score = 54.0 bits (27), Expect = 5e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 66 atgaatctagacatatata 84
||||||||| | |||||||
Sbjct: 98 atgaatctaaatatatata 80
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| | ||||| |||| | || ||| |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||| | ||||| | ||||| |||| || ||||| |||| |||
Sbjct: 154 actactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgc 95
Query: 64 taatgaatctagacatatat 83
||||||||||||||||||||
Sbjct: 94 taatgaatctagacatatat 75
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
||||| |||| ||||||||||||| || |||||||||||||||||||||||
Sbjct: 33 ttctagcatttcccacatttatattaatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | ||||| |||| ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatat 79
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 5e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | | ||| ||||| || | ||||||||||| || ||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 66 atgaatctagacatat 81
||||||||||||||||
Sbjct: 65 atgaatctagacatat 80
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | ||||| ||||| || || | ||||||| ||| |||| ||
Sbjct: 155 ctactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtt 96
Query: 65 aatgaatcta 74
||||||||||
Sbjct: 95 aatgaatcta 86
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 5e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | ||||| |||| |||||||| |||| ||| |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 66 atgaatctagacatat 81
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 2 taactactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||||||||||||||||| | | ||| | ||||| |||| ||||||| |||| ||
Sbjct: 162 taactactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaat 103
Query: 62 attaatgaatctagacatatatat 85
|||||||||||||||||||||||
Sbjct: 102 gttaatgaatctagacatatatat 79
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
||||| |||| |||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatat 58
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| | ||| | ||||| |||| |||||||| |||| ||| ||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 65 aatgaatctagacatatat 83
|||| ||||||||||||||
Sbjct: 70 aatggatctagacatatat 52
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| ||||| ||||| ||||||| |||||||| |||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 66 atgaatctagacata 80
|| ||||||||||||
Sbjct: 77 ataaatctagacata 63
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 7 actccctccgtttcatattataaaactttctaacattgcccacatttatatagatattaa 66
||||||||||||||||| | ||| | ||||| |||| |||||||| |||| || |||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 67 tgaatctagacatatatat 85
|||||||||||||||||||
Sbjct: 97 tgaatctagacatatatat 79
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatata 84
||||| |||| |||||||| |||| ||| ||||||||||||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagacatatata 83
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatata 84
|||||||||| |||||||| |||||| | |||||||||||||| |||||||
Sbjct: 100 ttctaacatttcccacattcatataggtgttaatgaatctagatatatata 50
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 46 ccacatttatatagatattaatgaatctagacatatatat 85
||||||| |||||| | ||||||||||||||||| |||||
Sbjct: 15 ccacattcatataggtgttaatgaatctagacatctatat 54
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatata 84
||||| |||| |||||||| |||| |||||||||||||||||||||||||
Sbjct: 107 ttctagcatttcccacattcatatttatattaatgaatctagacatatata 57
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | |||||||||| |||||||| |||| ||| |||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 76 atgaatctaga 66
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 31 actttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
|||||||| ||| |||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 6 actttctagcatcacccacattcatatagatgttaatgaatctagacacatatat 60
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 47 cacatttatatagatattaatgaatctagacatatatatg 86
|||||| |||||||| | ||||||||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatg 54
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 8e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||| ||||||||||| | ||| | ||| | |||| |||||||| |||| |||
Sbjct: 160 actactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatgg 101
Query: 64 taatgaatctagacatatatat 85
||||||||||||||||||||||
Sbjct: 100 taatgaatctagacatatatat 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||| |||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 66 atgaatctagacatatatat 85
||||||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| | ||||| |||| |||||||| |||||||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 65 aatgaatcta 74
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | | ||| |||||||| |||| |||||||| || ||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 66 atgaatctagacat 79
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| |||||||| ||||| ||| || |||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 66 atgaatcta 74
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 60.0 bits (30), Expect = 8e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| |||| |||||| | | ||| |||||||| | ||||||||||| ||||||||||||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 66 atgaat 71
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 60.0 bits (30), Expect = 8e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||||||||||||||| | | ||| | |||||| ||||||||||||| ||||||||
Sbjct: 122 actactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagat 65
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||| ||||||||||| | | ||| |||||||| | ||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagat 60
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 60.0 bits (30), Expect = 8e-09
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||| | ||||| | ||||| ||| |||||||| |||| ||| ||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 65 aatgaatctagacatatatatgaatgtgaacaatgcta 102
|||||||||| |||| ||||||||||| | |||||||
Sbjct: 73 aatgaatctaaacatcaatatgaatgtggaaaatgcta 36
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||||| | ||| | ||||| |||| |||||||| |||| ||| |
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 65 aatgaatctagaca 78
||||||||||||||
Sbjct: 93 aatgaatctagaca 80
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacat 79
||||| |||| |||||||| |||| ||| | |||||||||||||||
Sbjct: 33 ttctatcatttcccacattcatattgatgtcaatgaatctagacat 78
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 60.0 bits (30), Expect = 8e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | || || |||| |||| ||| |||| ||| |||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 66 atgaatctagacatatat 83
||||||||||||||||||
Sbjct: 89 atgaatctagacatatat 72
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||| |||| ||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 66 atgaatctagacatatatatg 86
||||||||| |||||| ||||
Sbjct: 97 atgaatctaaacatatgtatg 77
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctag 75
||||| |||| |||||||| |||| ||| |||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | | ||| |||||||| |||||| ||||| |||||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 66 atgaatcta 74
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| | ||| | |||| |||| ||| |||| ||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 65 aatgaatctagacatatatat 85
|||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||||| | ||| | ||||| |||| || ||||| |||| ||| |
Sbjct: 125 actactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgt 66
Query: 64 taatgaatctaga 76
|||||||||||||
Sbjct: 65 taatgaatctaga 53
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 3e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||| ||||||||| ||||| | |||||||||| | ||||||||||| || ||||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 66 atgaatctagacatata 82
|||||||||| |||||
Sbjct: 65 gtgaatctagatatata 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatata 58
|||||||||||||||||||| | ||| | ||||| |||| ||||||| ||||||
Sbjct: 130 actactccctccgtttcataatgtaagtcattctagcatttcccacatctatata 76
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatata 82
||||| |||| |||||||| |||| ||| ||||||||||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagacatata 81
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 58.0 bits (29), Expect = 3e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
|||||| |||||||||| | | ||| | |||||||||| |||||||| |||| ||| ||
Sbjct: 4 ctactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 63
Query: 65 aatgaatctagacatat 81
|||||||||| ||||||
Sbjct: 64 aatgaatctaaacatat 80
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| | ||| | |||| |||| ||| |||| ||| ||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 65 aatgaatctagacatatatat 85
|||||||||||||||||||||
Sbjct: 97 aatgaatctagacatatatat 77
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||| | | ||| | |||||| ||| |||||||| |||| ||| ||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 65 aatgaatctagacatatatat 85
||||||| |||||||||||||
Sbjct: 99 aatgaatgtagacatatatat 79
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||| |||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatctagacatatatat 85
||||||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | ||||| |||| ||||||| |||| ||| |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 66 atgaatctagacatat 81
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||||| | ||| | || || |||| |||||||| |||| ||| ||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 65 aatgaatctaga 76
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| | ||||| |||| ||||||| |||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| ||||||||||| | | ||| | ||||| |||| |||||||| |||| ||| |
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 64 taatgaatctagacat 79
||||||||||||||||
Sbjct: 63 taatgaatctagacat 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||| | | ||| | ||||| |||| |||||||| |||| ||| ||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 65 aatgaatctaga 76
||||||||||||
Sbjct: 90 aatgaatctaga 79
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||||| | ||| | || || |||| |||||||| |||| ||| ||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 65 aatgaatctaga 76
||||||||||||
Sbjct: 87 aatgaatctaga 76
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| | |||||| |||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatatat 85
||||| ||||| ||||||| |||||||| |||||||||||| |||||||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatat 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| ||||||| |||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 66 atgaatctagacatatatat 85
|||||||||||| |||||||
Sbjct: 98 atgaatctagacttatatat 79
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | ||||| | ||||| |||| ||||| ||||||| ||| |||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 66 atgaatctagacatat 81
|||||||| |||||||
Sbjct: 96 atgaatctggacatat 81
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||| |||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| | ||||| |||| ||||||| |||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| ||| |||||||| |||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 66 atgaatctagacatatatat 85
||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 40 cattgcccacatttatatagatattaatgaatctagacatatat 83
|||| ||||||||||||| ||| || ||||||||||||||||||
Sbjct: 39 catttcccacatttatattgatgtttatgaatctagacatatat 82
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 40 cattgcccacatttatatagatattaatgaatctaga 76
|||| ||||||||||||| ||| ||||||||||||||
Sbjct: 124 catttcccacatttatattgatgttaatgaatctaga 88
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 36 ctaacattgcccacatttatatagatattaatgaatctagacatatatatg 86
|||||||| |||||||| |||| ||| ||||||| |||||||||||||||
Sbjct: 1 ctaacatttcccacattcatattgatgctaatgaaactagacatatatatg 51
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 36 ctaacattgcccacatttatatagatattaatgaatctagacatatatatg 86
|||||||| |||||||| |||| ||| |||| ||||||||||||||||||
Sbjct: 116 ctaacatttcccacattcatattgatgctaataaatctagacatatatatg 66
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | ||||| |||| |||||||| |||| || ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 66 atgaatctagacatatatatgaatgtg 92
||||||||||| || |||||||||||
Sbjct: 72 atgaatctagatatcaatatgaatgtg 46
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 40 cattgcccacatttatatagatattaatgaatctagacatatatatg 86
|||| |||||||| || ||||| |||||||||| |||||||||||||
Sbjct: 39 catttcccacattcatgtagatgttaatgaatcaagacatatatatg 85
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 47 cacatttatatagatattaatgaatctagacatatatatg 86
|||||| |||||||| |||||||||||| ||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgcatatatatg 76
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 59 gatattaatgaatctagacatatatat 85
|||||||||||||||||||||||||||
Sbjct: 105 gatattaatgaatctagacatatatat 79
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 64 taatgaatctagacatatatatgaatg 90
|||||||||||||||||||||||||||
Sbjct: 74 taatgaatctagacatatatatgaatg 48
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | ||||| |||| |||||||| |||| || ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 66 atgaatctagacatatatatgaatgtg 92
||||||||||| || |||||||||||
Sbjct: 65 atgaatctagatatcaatatgaatgtg 91
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 66 atgaatctaga 76
|| ||| ||||
Sbjct: 65 ataaatttaga 75
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| ||||| |||||||| || || ||||||| |||||||| |||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcatatagatgtta 80
Query: 66 atgaatc 72
|||||||
Sbjct: 79 atgaatc 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||||||||||||| |||||| |||||||| || || ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtccatattcatatagat 60
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| | |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 35 tctaacattgcccacatttatatagatattaatgaatctaga 76
||||||||| |||||||| |||| ||| ||||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctaga 76
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||||||||||||||||| | ||| | ||||| |||| | || ||| |||| ||||||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 65 aatgaatcta 74
||||||||||
Sbjct: 67 aatgaatcta 58
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 40 cattgcccacatttatatagatattaatgaatctagacatat 81
||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 13 cattgcccacattcacatagaagttaatgaatctagacatat 54
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 31 actttctaacattgcccacatttatatagatattaatgaatctagacat 79
|||||| | ||||||||||||| | ||||| |||||||||||||||||
Sbjct: 138 actttccagcattgcccacattcacatagaagttaatgaatctagacat 90
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||||||||||||||| | ||||| | ||||| |||| | | ||| |||| |||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 64 taatgaatctagacatatatat 85
||||||||||||||||||||||
Sbjct: 100 taatgaatctagacatatatat 79
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 12 ctccgtttcatattataaaactttctaacattgcccacatttatatagat 61
|||||||||||| | ||| |||||||| ||||||||| ||| ||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcatatagat 60
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | ||||| | || || |||| |||||||||||| ||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 66 atgaatctagacatatat 83
||||||||||| ||||||
Sbjct: 92 atgaatctagagatatat 75
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 40 cattgcccacatttatatagatattaatgaatctagacatat 81
||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 127 cattgcccacattcacatagaagttaatgaatctagacatat 86
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 31 actttctaacattgcccacatttatatagatattaatgaatctagacat 79
|||||| | ||||||||||||| | ||||| |||||||||||||||||
Sbjct: 2 actttccagcattgcccacattcacatagaagttaatgaatctagacat 50
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 4 actactccctccgtttcatattataaaactttctaacattgcccacatttatatagatat 63
|||||| ||||||||||| | | ||| | ||||| |||| |||||||| |||| ||| |
Sbjct: 160 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 64 taatgaatctagacatatatat 85
||||||||||||| | ||||||
Sbjct: 100 taatgaatctagataaatatat 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| ||| ||| |||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 66 atgaatctagacatatatat 85
||||||||| ||||||||||
Sbjct: 65 atgaatctatacatatatat 84
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||| | | ||| | ||||| |||| ||||||| |||| |||
Sbjct: 2 aactactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatg 61
Query: 63 ttaatgaatctaga 76
||||||||||||||
Sbjct: 62 ttaatgaatctaga 75
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||| ||| |||| ||| |||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 79 atgaatctagaca 67
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataa 29
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcatattataa 28
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataa 29
|||||||||||||||||||||||||
Sbjct: 72 ctactccctccgtttcatattataa 48
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| ||||||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 66 atgaatctagacatatatatg 86
|||||| || |||||||||||
Sbjct: 98 atgaatttaaacatatatatg 78
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| ||| |||||||| |||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 66 atgaatcta 74
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 50.1 bits (25), Expect = 8e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 9 tccctccgtttcatattataaaactttctaacattgcccacatttatatagatattaatg 68
||||||||||||| | | ||| ||||||| |||| |||||||||| ||||| ||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 69 aatct 73
|||||
Sbjct: 55 aatct 51
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
|||||||||||||| || | ||||| | |||||||||| | || ||| |||| ||| |
Sbjct: 159 ctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgct 100
Query: 65 aatgaatctagacatatatat 85
|||||||||| ||||||||||
Sbjct: 99 aatgaatctaaacatatatat 79
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 35 tctaacattgcccacatttatatagatattaatgaatctagacatatat 83
||||||||| ||||||| |||| ||| |||||||||||||| ||||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctagatatatat 53
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||| ||| |||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 66 atgaatctagaca 78
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||| | ||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 136 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatt 77
Query: 65 aatgaatct 73
|||||||||
Sbjct: 76 aatgaatct 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 3 aactactccctccgtttcatattataaaactttctaacattgcccacatttatatagata 62
||||||||||||||||||| | ||||| | ||||| |||| | |||||| | || ||||
Sbjct: 2 aactactccctccgtttcacaatataagtcattctagcatttcacacattcacattgata 61
Query: 63 ttaatga 69
|||||||
Sbjct: 62 ttaatga 68
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 40 cattgcccacatttatatagatattaatgaatctagacatatatatgaatgtg 92
|||| |||| |||||||| ||| |||||||||||||||| |||||||||||
Sbjct: 39 catttcccatatttatattgatgctaatgaatctagacatcaatatgaatgtg 91
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcc 46
|||||||||||||||||| | ||| |||||||| |||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcattgcc 84
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 8e-06
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||| ||| | ||| | |||||||||| ||||||| ||| ||| |||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 66 atgaatctagacatata 82
||||||||||||||||
Sbjct: 78 gtgaatctagacatata 62
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 48.1 bits (24), Expect = 3e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | | ||| |||||||| ||||| ||||||| || ||||| |||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcattg-ccacattcatttagatgtta 81
Query: 66 atgaatctagacatat 81
|||||||| ||||||
Sbjct: 80 ttgaatctaaacatat 65
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatataga 60
|||||||||||||||||| | ||| ||||| || ||| | ||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcatcgtccatatttatataga 59
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||||| | ||| | ||||| |||| |||||||| |||| ||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 66 atgaatc 72
|||||||
Sbjct: 78 atgaatc 72
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatataga 60
|||||||||||||||| | ||||| ||||| || ||| | ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagactttttagcatcgtccatatttatataga 59
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 9 tccctccgtttcatattataaaactttctaacattgcccacatttatatagatattaatg 68
||||||||||||| | | ||| | ||||| |||| | |||||| |||| ||| | ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 69 aatctagacatatat 83
|||||||||||||||
Sbjct: 95 aatctagacatatat 81
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 66 atgaatctaga 76
|| ||| ||||
Sbjct: 65 ataaatttaga 75
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttc 36
|||||||||||||||||| ||||| ||||||
Sbjct: 130 tactccctccgtttcatactataagactttc 100
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | ||||| | ||||| ||| |||||||| |||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||||||||||||||| | | ||| | ||||| |||| |||| ||| |||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| | ||||| |||| |||| ||| |||| ||| |||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 80 atgaatctaga 70
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||| | ||||| | ||||| |||| | |||||| |||| ||| |||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 66 atgaatctaga 76
|||||||||||
Sbjct: 67 atgaatctaga 57
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| | ||| | ||||| |||| ||||||| |||| ||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 65 aatgaatcta 74
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatat 83
||||| |||| | |||||| |||| ||| ||||||||||||||||||||
Sbjct: 97 ttctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 64 taatgaatctagacatatatat 85
||||||||||||||||||||||
Sbjct: 100 taatgaatctagacatatatat 79
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 5 ctactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatt 64
||||| ||||||||||||| | ||| | ||||| |||| ||||||| |||| ||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 65 aatgaatcta 74
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 34 ttctaacattgcccacatttatatagatattaatgaatctagacatatat 83
||||| |||| |||||||| |||| || ||||||||||||||||||||
Sbjct: 102 ttctagcatttcccacattcatattagtactaatgaatctagacatatat 53
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 6 tactccctccgtttcatattataaaactttctaacattgcccacatttatatagatatta 65
|||| ||||||||||||| | ||| | ||||| ||| | |||||| |||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 66 atgaatctagacatatat 83
||||||||||||| ||||
Sbjct: 65 atgaatctagacaaatat 82
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 cctccgtttcatattataaaactttctaacattg 44
||||||||||||| | |||||||||||| |||||
Sbjct: 10 cctccgtttcataatgtaaaactttctagcattg 43
