miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 212 bits (107), Expect = 1e-54
Identities = 133/142 (93%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 8 gatatacttcctccgtttcatattataatactatctattattgcccacattcatat---- 63
|||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 1 gatatacttcctccgttttatattataagactatctagtattgcccacattcatatatat 60
Query: 64 --atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 120
Query: 122 tatgaaacggagggagtattat 143
||||||||||||||||||||||
Sbjct: 121 tatgaaacggagggagtattat 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcatata 64
||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgcccacattcatata 86
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 182 bits (92), Expect = 9e-46
Identities = 119/128 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatatatatgtct 64
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| ||| |||||||||||||| |||| |||||||||||||||| ||||||||
Sbjct: 65 agattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaacgg 124
Query: 132 agggagta 139
||||||||
Sbjct: 125 agggagta 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||| ||||||||||| ||||||| ||| |||| ||| |||||||||||||||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 72 a-gattcattag-catctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
| || || ||| ||| |||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 72 atgaatc--tagacatatatatgaatgtgggtaatactagaaagtcttataatatgaaac 15
Query: 130 ggagggagta 139
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 151 bits (76), Expect = 3e-36
Identities = 115/128 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||| ||||||||||||||||||| ||| |||| |||||||||||||| || | ||| |
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcacatgtgtgttt 64
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 65 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactg 124
Query: 132 agggagta 139
||| ||||
Sbjct: 125 aggaagta 132
Score = 97.6 bits (49), Expect = 4e-20
Identities = 111/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
||||||||| |||||||||||||| ||| |||| |||||||||||||||||| ||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 72 a-gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
| || || | | || || ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 72 atgaatc-taaacacacatgtgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 131 gagggagta 139
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 78 catatatatgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtctta 137
Query: 119 taatatgaaacggagggagta 139
|||||||||||||||| ||||
Sbjct: 138 taatatgaaacggaggaagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| ||| ||| ||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 84 atatatgtgtataggttcattaacatctatatgattgtgggcaatgctagaaagtcttat 25
Query: 120 aatatgaaacggagggagtat 140
|||||||||||||||||||||
Sbjct: 24 aatatgaaacggagggagtat 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatata 64
|||||||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatata 106
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
||||| ||||||||||||||||||| ||| |||| |||||||||| ||||||| ||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgt 62
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 143 bits (72), Expect = 8e-34
Identities = 117/131 (89%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatat--atgt 69
|||| ||||| ||||| ||||||| ||| |||| ||||||||||||||||||| |||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatatatgtatgc 75
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
|||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 74 ctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 15
Query: 130 ggagggagtat 140
||||| |||||
Sbjct: 14 ggaggaagtat 4
Score = 93.7 bits (47), Expect = 6e-19
Identities = 115/134 (85%), Gaps = 4/134 (2%)
Strand = Plus / Plus
Query: 9 atatacttcctccgtttcatattataatactatctattattgcccacattcatatatatg 68
||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||
Sbjct: 2 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 61
Query: 69 tcta-gattcattagcat--ctatatgaatgtgggcaatgatagaaagtcttataatatg 125
| | || || | |||| ||||||||||||||||||| |||||||||||||||| ||
Sbjct: 62 ttaacgaatc-taggcatacatatatgaatgtgggcaatgctagaaagtcttataatctg 120
Query: 126 aaacggagggagta 139
||| ||||| ||||
Sbjct: 121 aaatggaggtagta 134
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 143 bits (72), Expect = 8e-34
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||| ||||||||||||||||||| ||| |||| |||||||||||||| | | ||| |
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcacgtgtgtgttt 64
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 65 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactg 124
Query: 132 agggagta 139
||| ||||
Sbjct: 125 aggaagta 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 91 tgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%), Gaps = 5/134 (3%)
Strand = Plus / Minus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcatata-----t 65
||||||||||||||||||||||||| ||| |||| |||| ||||||||||||| |
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatg 125
|||||||||| |||| ||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 78 gtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatatg 19
Query: 126 aaacggagggagta 139
||||||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||
Sbjct: 81 catctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagtat 138
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 139 bits (70), Expect = 1e-32
Identities = 114/129 (88%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||| ||||||||||||||||||| | | |||| ||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacattcat------gtct 58
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 59 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacgg 118
Query: 132 agggagtat 140
||| |||||
Sbjct: 119 aggaagtat 127
Score = 97.6 bits (49), Expect = 4e-20
Identities = 113/132 (85%), Gaps = 8/132 (6%)
Strand = Plus / Minus
Query: 9 atatacttcctccgtttcatattataatactatctattattgcccacattcatatatatg 68
||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||
Sbjct: 129 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 70
Query: 69 tcta-gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaa 127
| | || || ||| | |||||||||||||||| |||||| ||||||||||||||
Sbjct: 69 ttaatgaatc--tag-----acatgaatgtgggcaatgctagaaaatcttataatatgaa 17
Query: 128 acggagggagta 139
||||||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 137 bits (69), Expect = 5e-32
Identities = 114/129 (88%)
Strand = Plus / Plus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtc 70
||||||||||| ||||||| | ||| ||| |||| |||| ||||||||||||| |||||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgtc 63
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||||||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaaca 123
Query: 131 gagggagta 139
|||||||||
Sbjct: 124 gagggagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||||||||||||| ||||| |||||||||||| | ||||||| ||||| |||||
Sbjct: 61 catctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagtat 4
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 137 bits (69), Expect = 5e-32
Identities = 116/131 (88%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt-- 69
||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcttattataagactttctagcattacccacattcatatatatgttg 64
Query: 70 -ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 65 tctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatgaaa 124
Query: 129 cggagggagta 139
| |||| ||||
Sbjct: 125 cagaggaagta 135
Score = 81.8 bits (41), Expect = 2e-15
Identities = 112/133 (84%), Gaps = 7/133 (5%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
||||||||| |||||||||||||| ||| |||| |||| ||||||||||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgtta 76
Query: 72 a-gattcattag----catctatatgaatgtgggcaatgatagaaagtcttataatatga 126
| || || ||| ||| |||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 75 atgaatc--tagacaacatatatatgaatgtgggtaatgctagaaagtcttataataaga 18
Query: 127 aacggagggagta 139
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 123 bits (62), Expect = 7e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 131 gagggagtat 140
||||||||||
Sbjct: 152 gagggagtat 161
Score = 117 bits (59), Expect = 4e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 82 atatatatatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 23
Query: 122 tatgaaacggagggagtat 140
||||||||||||| |||||
Sbjct: 22 tatgaaacggaggaagtat 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 9 atatacttcctccgtttcatattataatactatctattattgcccacattcatatatatg 68
||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||
Sbjct: 2 atatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatg 61
Query: 69 t 69
|
Sbjct: 62 t 62
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 9 atatacttcctccgtttcatattataatactatctattattgcccacattcatatatatg 68
||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||| |||
Sbjct: 163 atatactccctccgtttcatattataagactttctagcattgcccacattcatatagatg 104
Query: 69 t 69
|
Sbjct: 103 t 103
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 76/81 (93%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 85 catatatatgtctagattcattgacatatatatgaatgtgggcaatgttagaaagtctta 26
Query: 119 taatatgaaacggagggagta 139
|||||||||||||||| ||||
Sbjct: 25 taatatgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| ||| |||||||||| |||||||||||| ||| |||| |||||||||||||
Sbjct: 79 atatatgtgtttagattcattgacatctatatgaagatggacaattctagaaagtcttat 138
Query: 120 aatatgaaacggagggagta 139
||||||||||||||||||||
Sbjct: 139 aatatgaaacggagggagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtc 70
|||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtc 63
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtc 70
|||| ||||||||||||||||||| ||| |||| |||| ||| |||||||| |||||
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtc 100
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 84 atatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatc 143
Query: 124 tgaaacggagggagta 139
||||||||||||||||
Sbjct: 144 tgaaacggagggagta 159
Score = 101 bits (51), Expect = 3e-21
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 67 tgtctagattcatt-agcatctatatgaatgtgggcaatgatagaaagtcttataatatg 125
|||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 78 tgtctagattaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatg 19
Query: 126 aaacggagggagtat 140
|||||||||||||||
Sbjct: 18 aaacggagggagtat 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 10 tatacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||| ||||||||||||||||||| ||| |||| ||| |||||||||||||| ||||
Sbjct: 3 tatactccctccgtttcatattataagactttctagcattacccacattcatatagatgt 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| ||||||||||| ||||||| ||| |||| |||||||||||||||||| ||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgt 102
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 117 bits (59), Expect = 4e-26
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||||||||| ||||||||||||| ||| |||| |||| ||| || || ||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattgtccatat----attcatgtct 73
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| | | ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 72 agattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacgg 13
Query: 132 agggagta 139
||||||||
Sbjct: 12 agggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatata 66
|||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatata 59
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 101 caatgatagaaagtcttataatatgaaacggagggagta 139
||||| |||||||||||||||||||||| ||||| ||||
Sbjct: 90 caatgctagaaagtcttataatatgaaaaggaggaagta 128
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 117 bits (59), Expect = 4e-26
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||||||||| ||||||||||||| ||| |||| |||| ||| || || ||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattgtccatat----attcatgtct 60
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| | | ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 agattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacgg 120
Query: 132 agggagta 139
||||||||
Sbjct: 121 agggagta 128
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatata 66
|||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatata 74
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 101 caatgatagaaagtcttataatatgaaacggagggagta 139
||||| |||||||||||||||||||||| ||||| ||||
Sbjct: 43 caatgctagaaagtcttataatatgaaaaggaggaagta 5
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatg 125
|||||||||||||||||||||||||||||||||||||||| |||||||||||| | | ||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 126 aaacggagggagtat 140
|||||||||||||||
Sbjct: 145 aaacggagggagtat 159
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
|||||| ||||||||||||||||||||||| |||| || ||||||||| | |||||||||
Sbjct: 73 tagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacg 14
Query: 131 gagggagta 139
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 10 tatacttcctccgtttcatattataatactatctattattgcccacattcatata 64
|||||| ||||||||||| | | ||| ||| |||| ||||||||||||||||||
Sbjct: 160 tatactccctccgtttcacaatgtaagactttctaacattgcccacattcatata 106
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 117 bits (59), Expect = 4e-26
Identities = 113/130 (86%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatata--tatgt 69
|||| ||||||||||||||| ||| ||| |||| |||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagatatgt 64
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
||||||| |||| ||||||||||||||||||||||| |||||||||||| | | ||||||
Sbjct: 65 ctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaac 124
Query: 130 ggagggagta 139
||||| ||||
Sbjct: 125 ggaggaagta 134
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 84 atctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||
Sbjct: 60 atctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 130 cggagggagta 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| ||||||||||||| || |||||| ||||||| |||||| |||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 129 cggagggagta 139
| |||| ||||
Sbjct: 15 cagaggaagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 61 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 120
||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
Sbjct: 83 tatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttaca 24
Query: 121 atatgaaacggagggagta 139
||||||||||||| ||||
Sbjct: 23 ttatgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||||||||||||| |||||||| |||||||||||| | | |||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 131 gagggagta 139
|||||||||
Sbjct: 150 gagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattca 60
|||||||||||||||||| | ||| ||| |||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 81 atatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacat 140
Query: 122 tatgaaacggagggagtat 140
||||||||||||| |||||
Sbjct: 141 tatgaaacggaggaagtat 159
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| |||||||||||||||| | |||| || ||||||||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatga 18
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 10 tatacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||||||| | ||| ||| |||| |||||||||||||||||| ||||
Sbjct: 160 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 101
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 82 atatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacat 23
Query: 122 tatgaaacggagggagtat 140
||||||||||||| |||||
Sbjct: 22 tatgaaacggaggaagtat 4
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| |||||||||||||||| |||||| || ||||||||| | |||||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatga 145
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 146 aacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 10 tatacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||||||| | ||| ||| |||| |||||||||||||||||| ||||
Sbjct: 3 tatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||| ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||
Sbjct: 78 catacatatgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtctta 137
Query: 119 taatatgaaacggagggagtat 140
| | |||||||||||||||||
Sbjct: 138 cattgtgaaacggagggagtat 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||| |||||| |||||||||||| |||||||||||| | | |||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 131 gagggagta 139
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||| | | ||| ||| |||| ||||||||||| |||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgt 62
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
|||||||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 130 ggagggagta 139
||||||||||
Sbjct: 149 ggagggagta 158
Score = 93.7 bits (47), Expect = 6e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
||||||||||||||||||||| |||||||| ||||||||||| | |||||||||||| |
Sbjct: 82 atatatgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacat 23
Query: 122 tatgaaacggagggagtat 140
|||||||| |||| |||||
Sbjct: 22 tatgaaacagaggaagtat 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatg 68
|||| ||||||||||||| | ||| ||| |||| ||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatg 102
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||| |||||||| ||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 127 aacggagggagtat 140
||||||||||||||
Sbjct: 17 aacggagggagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||
Sbjct: 86 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacat 140
Query: 122 tatgaaacggagggagta 139
| ||||||||||||||||
Sbjct: 141 tgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||| |||||||| ||||||||||||| |||||| | |||||||||||| | | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtga 18
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| ||||||||||| | | ||| ||| |||| ||||||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgt 101
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| | |
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 123 atgaaacggagggagta 139
|||||||||||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 100 gcaatgatagaaagtcttataatatgaaacggagggagtat 140
|||||| |||||||||||| | |||||||||||||||||||
Sbjct: 83 gcaatgctagaaagtcttacattatgaaacggagggagtat 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||||| | ||| || |||| |||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaaca 14
Query: 131 gagggagta 139
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaat-----taagtcttataatatgaaacg 146
Query: 131 gagggagta 139
|||| ||||
Sbjct: 147 gaggaagta 155
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| |||| |||||||||||||| ||| |||| |||||||||||||||||| ||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgt 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%), Gaps = 5/58 (8%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||||||||||| ||| | |||||||||||||||||| ||||
Sbjct: 155 tacttcctccgtttcatattataagact-----taattgcccacattcatatagatgt 103
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||||||||||||||||||||||| |||||||||||| | |||||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 131 gagggagta 139
|||||||||
Sbjct: 132 gagggagta 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 77 cattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
||||| ||||||||||||||| ||||||| |||||||||||| | |||||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 85 catatatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagactta 26
Query: 119 taatatgaaacggagggagta 139
| ||||||||||||| ||||
Sbjct: 25 cattatgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| ||||||||||||||| ||||||||||||| || |||||| ||||||||||||
Sbjct: 79 atatatgtgtctagattcattaacatctatatgaatatgagcaatgctagaaagtcttac 138
Query: 120 aatatgaaacggagggagta 139
| ||||||||||||||||||
Sbjct: 139 attatgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||||| | ||| || |||| ||||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 103 bits (52), Expect = 7e-22
Identities = 115/136 (84%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatata-----ta 66
||||| |||||||||||| | ||| ||| |||| |||||||||||| ||||| ||
Sbjct: 5 tactttctccgtttcataatgtaagactttctagcattgcccacatttatatagatgtta 64
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| ||||||||| ||| ||| ||||| |||||||||||| | |||||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatga 124
Query: 127 aacggagggagtatta 142
||||||| ||||||||
Sbjct: 125 aacggagagagtatta 140
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
||||||||| ||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 61 catctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||| |
Sbjct: 82 atatatgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacat 23
Query: 122 tatgaaacggagggagtat 140
||||||||||||| |||||
Sbjct: 22 tatgaaacggaggaagtat 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||||||||||||||||| ||| |||||||||||| | |||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacg 149
Query: 131 gagggagta 139
|||||||||
Sbjct: 150 gagggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
||||||||||||||||||| | ||| ||| |||| |||| | ||||||||||| ||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgt 62
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||||||||||||||||| ||||||||||||| |||||||| |||||||||||| |
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacat 140
Query: 122 tatgaaacggagggagta 139
| ||||||||||||||||
Sbjct: 141 tgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||| |||||||| ||||||||||||| |||||| | |||||||||||| | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacatggtga 18
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| ||||||||||| | | ||| ||| |||| ||||||||| ||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgt 101
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 99.6 bits (50), Expect = 1e-20
Identities = 107/125 (85%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 17 cctccgtttcatattataatactatctattattgcccacattcatatatatgtct--aga 74
||||||||||||| ||||| ||| |||| ||||||||||| |||||||||| | |||
Sbjct: 10 cctccgtttcataatataagactttctagcattgcccacatctatatatatgtgtttaga 69
Query: 75 ttcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagg 134
||||||| ||||||||| |||||||||||| |||||||||||||| | | |||||||||
Sbjct: 70 ttcattaacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacggagg 129
Query: 135 gagta 139
||||
Sbjct: 130 tagta 134
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 94 atgtgggcaatgatagaaagtcttataatatgaaacggaggga 136
|||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttatattatgaaacggaggga 8
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
|||||||||||| |||||||||| |||||||||||| |||||||||||| | ||||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 130 ggagggagta 139
||||||||||
Sbjct: 138 ggagggagta 147
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| |||||| |||||||| |||||| |||||||||||| | | |||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 127 aacggagggagta 139
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| ||||||||||||| | ||| ||| |||| ||||||||||| |||||| ||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgt 90
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 85 catatatatgtctagatttattaacatatatatgaatgtgggcaatgccagaaagtctta 26
Query: 119 taatatgaaacggagggagtat 140
||| ||||||||||| |||||
Sbjct: 25 taacttgaaacggaggaagtat 4
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 91 agattcattaacatatatatgaatgtgggcaatgctagaaagtcttataacttgaaacgg 150
Query: 132 agggagta 139
||| ||||
Sbjct: 151 aggtagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
||||||||||||||||| |||||| ||| ||| |||||||||||||||||||||||
Sbjct: 4 atacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgt 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| ||||||||||| |||||| ||| |||| |||||||||||||||||||||||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgt 101
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
||||| ||||| ||||||| ||||||||||||| |||||||| |||||||||||||| |
Sbjct: 81 tatatatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatatt 22
Query: 123 atgaaacggagggagta 139
|||||||||||||||||
Sbjct: 21 atgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||||||||||||||| ||||||||||||||||| |||| || ||||||||| | |
Sbjct: 83 atatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattg 142
Query: 124 tgaaacggagggagtat 140
|||||||||||||||||
Sbjct: 143 tgaaacggagggagtat 159
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| ||||||||||||| ||||| ||| |||| ||||||||| ||||||||| ||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 62
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| ||||||||||||||||||||||| ||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 127 aacggagggagta 139
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||||||||||||||| |||||| |||||| | |||||| || ||||||||| | ||
Sbjct: 81 atatgtctagattcattaacatctagatgaatataagcaatgctacaaagtcttacatta 140
Query: 124 tgaaacggagggagtat 140
|||||||||||||||||
Sbjct: 141 tgaaacggagggagtat 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||||| | ||| || |||| |||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 56 attcatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtc 115
|||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| | |
Sbjct: 49 attcatatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgac 108
Query: 116 ttataatatgaaacggagggagtat 140
||| | ||||||| ||||| |||||
Sbjct: 109 ttacattatgaaatggaggaagtat 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 87 tatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||||| | || |||| ||||| | |||| | |||||||||||||||||||
Sbjct: 57 tatatgaatataggtaatgctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 60 atatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 53 ctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 109/128 (85%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||||||||| ||||||| | ||| ||| |||| ||||||||||||||||| | | ||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatatgttt--ct 73
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| |||| ||| ||||||||||||| |||||||||||| | |||||||| |
Sbjct: 72 agattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaactg 13
Query: 132 agggagta 139
||||||||
Sbjct: 12 agggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||||||||||||||| |||||||||||| | ||||||| ||||| ||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
||||| ||||| ||||||| ||||||||||||| |||||||| |||||||||||||| |
Sbjct: 82 tatatatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatatt 141
Query: 123 atgaaacggagggagta 139
|||||||||||||||||
Sbjct: 142 atgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||||||||||||||| ||||||||||||||||| |||| || ||||||||| | |
Sbjct: 80 atatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattg 21
Query: 124 tgaaacggagggagtat 140
|||||||||||||||||
Sbjct: 20 tgaaacggagggagtat 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||| ||||||||||||| ||||| ||| |||| ||||||||| ||||||||| ||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 101
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 87 tatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 96 gtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatata 64
|||| ||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccac 55
|||||||||||||||||||||||| ||| |||| |||||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgcccac 61
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
||||||||| |||||||||| ||||||||||||||||||||||| ||||| | ||||||
Sbjct: 82 atatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatat 23
Query: 122 tatgaaacggagg 134
|||||||||||||
Sbjct: 22 tatgaaacggagg 10
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||| || ||||||||||||| ||||||| ||||||||||||| ||||| | ||||
Sbjct: 76 catatatgtggctagattcattagtatctataagaatgtgggcaatcctagaatgactta 135
Query: 119 taatatgaaacggagggagta 139
|| | ||||||||||||||||
Sbjct: 136 tattgtgaaacggagggagta 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 15 ttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
||||||||||||||| ||||| | |||| |||||||||||||||||| ||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| ||||||||||| |||||||||| ||||||| |||| |||||||||||||| |
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 124 tgaaacggagggagta 139
||||||||||||||||
Sbjct: 121 tgaaacggagggagta 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 93 aatgtgggcaatgatagaaagtcttataatatgaaacggagggagtatta 142
||||||| ||||| | ||||||||||| | ||||||||||| |||||||
Sbjct: 51 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagtatta 2
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| ||||||||||| |||||||||| ||||||| |||| |||||||||||||| |
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 124 tgaaacggagggagta 139
||||||||||||||||
Sbjct: 20 tgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 93 aatgtgggcaatgatagaaagtcttataatatgaaacggagggagtatta 142
||||||| ||||| | ||||||||||| | ||||||||||| |||||||
Sbjct: 90 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagtatta 139
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 6e-19
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 90 atgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagtat 4
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 134 ggagta 139
| ||||
Sbjct: 109 gaagta 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcat 61
||||| ||||||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctaacattgcccacattcat 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatata 64
|||||||||||||||||||||||| ||| |||| ||| |||| |||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatata 62
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||| |||||||| ||||||||||||||||||||||| || ||||| ||| | |||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 127 aacggagggagtat 140
||||||||||||||
Sbjct: 130 aacggagggagtat 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||||||||||||||| |||||| |||||||||| |||| ||||||||||||
Sbjct: 85 catatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtctta 26
Query: 119 taatatgaaacggagggagtat 140
| | ||||||||||| |||||
Sbjct: 25 cattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||| ||| ||||||||||||||||| ||||| |||||||||||| | |||||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 127 aacggaggga 136
||||||||||
Sbjct: 96 aacggaggga 105
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||||||||| ||||||||||||| |||| |||||||||||||| ||||||||||||
Sbjct: 70 attcattagcatttatatgaatgtggacaatactagaaagtcttatagtatgaaacggag 11
Query: 134 ggagta 139
||||||
Sbjct: 10 ggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 90 atgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||| ||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcat 61
|||||||||||||||||||||||| ||| |||| |||||||| ||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattgcccatattcat 65
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatata 64
|||| ||||||||||||| ||||| ||| |||| ||||| |||||||||||||
Sbjct: 5 tactccctccgtttcatactataagactttctagtattgtccacattcatata 57
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||| ||||||||||||| ||||||| ||||||||||||||| || ||||||||| |
Sbjct: 81 atatatatctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacat 140
Query: 122 tatgaaacggagggagta 139
| ||||||||||||||||
Sbjct: 141 tgtgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| |||||||||||||||| |||||| ||| |||||||| | | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtga 18
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 57 atatatgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||| |||| |||||||||||| ||| ||||||||| ||||||||| |||||||||||||
Sbjct: 60 atatgtatgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
||||||||||||||||||||||||| |||||||||| || |||| ||||| | ||||||
Sbjct: 75 atatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatat 134
Query: 122 tatgaaacggagggagta 139
| ||||||||||||||||
Sbjct: 135 tgtgaaacggagggagta 152
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||| |||||||||||||||||| ||||||||||||| |||| ||||| | |||| | |
Sbjct: 80 atatatctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 124 tgaaacggagggagta 139
||||||||||| ||||
Sbjct: 20 tgaaacggaggaagta 5
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 51 cccacattcatatatatgtctagattcattagcatctatatgaatgtgggcaatgataga 110
||||||||||||| || ||||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 44 cccacattcatattgatatctagattcattagcattaatatgaatgtgggaaatgctaga 103
Query: 111 aagtcttataatatgaaacggagggagta 139
| | |||||| | ||||||||||||||||
Sbjct: 104 atgacttatattgtgaaacggagggagta 132
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| ||| ||||||||||||| ||||| |||||||||||| | |||||
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 127 aacggagggagta 139
|||||||| ||||
Sbjct: 144 aacggaggaagta 156
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
|||||||||||| |||| |||||||| | ||||||| |||||||||||| | ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 130 ggagggagta 139
||||||||||
Sbjct: 14 ggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||||||||||| | ||| ||| |||| |||| ||||||||||||| ||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgt 99
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||||||||||| ||||| |||||||||||| |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagtat 140
| |||||||||||||||||||
Sbjct: 24 attatgaaacggagggagtat 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | |||||||||||||||||| ||||| ||||| |||| ||||| | ||||
Sbjct: 79 atatatctatctagattcattagcatcaatatggatgtgaacaatagtagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| ||||||||||||||||||
Sbjct: 139 attatgaaacggagggagta 158
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||||||| |||| ||||||||||||||||| ||||| |||||||||||| | | |||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 128 aacggagggagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||||||||| ||| |||| || ||||||||| | | |||||||||||||||||
Sbjct: 61 catctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 51 cccacattcatatatatgtctagattcattagcatctatatgaatgtgggcaatgataga 110
||||||||||||| || ||||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 93 cccacattcatattgatatctagattcattagcattaatatgaatgtgggaaatgctaga 34
Query: 111 aagtcttataatatgaaacggagggagta 139
| | |||||| | ||||||||||||||||
Sbjct: 33 atgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||||||||||| ||||| |||||||||||| |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagtat 140
| |||||||||||||||||||
Sbjct: 24 attatgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | |||||||||||||||||| ||||| ||||| ||| ||||| | ||||
Sbjct: 79 atatatttatctagattcattagcatcgatatggatgtgaaaaatactagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| ||||||||||||||||||
Sbjct: 139 attatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||| |||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||
Sbjct: 85 catacatatgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtctta 26
Query: 119 taatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||| ||||| | ||||||||| |||||||||||| | | |||||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 131 gagggagtatt 141
|||||||||||
Sbjct: 150 gagggagtatt 160
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 61 catatatatatctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 2
Query: 119 t 119
|
Sbjct: 1 t 1
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| || |||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 55 atatatgtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 attgcccacattcatatatatgt 69
|||||||||||||||||||||||
Sbjct: 16 attgcccacattcatatatatgt 38
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
|||||||||||||| |||| |||||| ||| |||||||||||| |||||||||||| | |
Sbjct: 82 tatatgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacatt 141
Query: 123 atgaaacggagggagta 139
||||||||||||||||
Sbjct: 142 gtgaaacggagggagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| ||||||||||| |||||| ||||||| || ||| || ||||||||| | |
Sbjct: 80 atatgtttagattcattaacatctaaatgaatggaggtaatactataaagtcttacattg 21
Query: 124 tgaaacggagggagta 139
||||||||||| ||||
Sbjct: 20 tgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| ||| ||||||||||||| |||||||||| | ||||
Sbjct: 84 atatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| ||||||||||| ||||||||||||||||||||||| || || | |||| | ||
Sbjct: 83 atatgtttagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacatta 142
Query: 124 tgaaacggagggagta 139
||||||||||||||||
Sbjct: 143 tgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||||||||| || |||| || | ||||| | |||| | |||||||
Sbjct: 75 tctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaa 16
Query: 129 cggagggagta 139
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| ||||||||||||| |||| ||||| | ||||
Sbjct: 79 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||||||||||||||||| | ||| | |||| ||| |||| || |||||| | ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatatagacgtct 64
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| |||||||||| |||||||||||| ||||| | ||| | |||||||| |
Sbjct: 65 agattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaacag 124
Query: 132 agggagtattat 143
||||||||||||
Sbjct: 125 agggagtattat 136
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||| |||||||||||||||| |||||||||||||||| | ||||||| || | ||||
Sbjct: 84 atatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
||| ||||||||||||||||
Sbjct: 24 aatgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 61 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 120
||||||| | ||||||||| | |||||||||||||||||| |||| ||||| | |||| |
Sbjct: 80 tatatatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgacttaca 139
Query: 121 atatgaaacggagggagtat 140
| |||||||||||||||||
Sbjct: 140 ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||||||||||||||||| |||||||||||| |||| ||||| | ||||
Sbjct: 79 atatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | |||||||||||||| ||| ||||||||||| | |||| ||||| | |||||
Sbjct: 84 atatatctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttat 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||||||| |||| ||||||||||||||||| ||||| |||||||||||| | |||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 129 cggagggagtat 140
|||||||||||
Sbjct: 15 tggagggagtat 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 99 ggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaacggagggagtat 125
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| ||| ||||||||||||||||| | |||||||||||| | |||||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatga 18
Query: 127 aacggagggagtatt 141
||| |||| ||||||
Sbjct: 17 aaccgaggaagtatt 3
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||||| |||||||||| |||||||||||||||||||||| || ||||||||| |
Sbjct: 81 atatatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtcttacat 140
Query: 122 tatgaaacggagggagta 139
|||||||| |||||||||
Sbjct: 141 tatgaaaccgagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 11 atacttcctccgtttcatattataatactatctattattgcccacattcatatatatgt 69
|||||||||| |||||||| | ||| ||| |||| ||||||||||||||||||||||
Sbjct: 4 atacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgt 62
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 65 tatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatat 124
||||||||||||||||| ||||||||||||| | ||||||| ||||| | |||| | |||
Sbjct: 79 tatgtctagattcattaacatctatatgaatataggcaatgctagaatgacttacattat 20
Query: 125 gaaacggagggagta 139
|||||||||||||||
Sbjct: 19 gaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||| ||||||||||||| |||| ||||||||||| ||| || ||||| | |||| | ||
Sbjct: 83 atatatctagattcattaacatccatatgaatgtgagcattgctagaatgacttacatta 142
Query: 124 tgaaacggagggagta 139
||||||||||| ||||
Sbjct: 143 tgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||| || |||||||||||||||||||||||||| |||| ||||| | ||||
Sbjct: 78 catatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgactta 137
Query: 119 taatatgaaacggagggagtat 140
| | |||||||||||||||||
Sbjct: 138 cattgtgaaacggagggagtat 159
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||||||||||||||||| | | |||| ||||| | |||| | | |||||||
Sbjct: 73 tagattcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacg 14
Query: 131 gagggagtatta 142
||||||||||||
Sbjct: 13 gagggagtatta 2
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| ||| ||||||||||||| ||| ||||| ||||||
Sbjct: 79 atatatatgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttac 138
Query: 120 aatatgaaacggagggagtatt 141
| | ||||||||||||||||||
Sbjct: 139 attgtgaaacggagggagtatt 160
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| ||||||||||||| |||| |||| ||||| | |||| | |||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatga 145
Query: 127 aacggagggagtat 140
||||||||||||||
Sbjct: 146 aacggagggagtat 159
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||| |||||||| |||||||||| |||||||||||| ||||| | |||| | |||||||
Sbjct: 75 tctaaattcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaa 16
Query: 129 cggagggagta 139
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||||||||||||||| |||||| |||||||||||||| | || ||||||||| | |
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattg 21
Query: 124 tgaaacggagggagtatt 141
||||||||||| ||||||
Sbjct: 20 tgaaacggaggaagtatt 3
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||||| |||| ||||||| | || || ||||||||||| | |||||||
Sbjct: 86 tagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacg 145
Query: 131 gagggagta 139
|||||||||
Sbjct: 146 gagggagta 154
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||| |||||| ||||||||||| |||||| ||||||||||| |||| ||||||||||||
Sbjct: 85 catacatatgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtctta 26
Query: 119 taatatgaaacggagggagta 139
| | |||||| |||||||||
Sbjct: 25 cattgtgaaacagagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 87 tatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||| ||||| |||||| || ||||||||| | | ||||||||||||||||
Sbjct: 108 tatatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| ||||||||||||||| || |||| ||||| | |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatga 18
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||| |||||||| ||||||||| |||||||||||| ||||| | |||| | |||||||
Sbjct: 88 tctaaattcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaa 147
Query: 129 cggagggagta 139
|||||| ||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||| |||||||||||||||||| |||||| |||||| ||||||||| || |||||||||
Sbjct: 78 catacatatgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtctta 137
Query: 119 taatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 138 cattgtgaaacggaggaagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| | |||||||| || || |||||| |||||||||||| | | |||||||
Sbjct: 73 tagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacg 14
Query: 131 gagggagta 139
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| ||||||||| |||||| ||||| |||||||||||| | |||||||
Sbjct: 73 tctagattcattaacatctatat--atgtggacaatggtagaaagtcttacattatgaaa 16
Query: 129 cggagggagtat 140
||||||||||||
Sbjct: 15 cggagggagtat 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||| |||| ||||||||||||| ||||| || ||||||| ||||| || |||||||||
Sbjct: 76 catacatatatctagattcattaatatctaaataaatgtggacaatgctaaaaagtctta 135
Query: 119 taatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 136 cattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||||||||||||||| |||| ||||||||||||| |||| ||||| | ||||
Sbjct: 76 catatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 135
Query: 119 taatatgaaacggagggagta 139
| | || |||||||||||||
Sbjct: 136 cattgtggaacggagggagta 156
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgt 97
|||||||||||||| |||||||| |||| ||||||||||
Sbjct: 85 catatatatgtctacattcattaacatcaatatgaatgt 47
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||||||||||| ||||||| |||| |||||||||| |||||||||||||| |||||
Sbjct: 86 tgtctagattcattgacatctatgtgaacgtgggcaatgctagaaagtcttatattatga 145
Query: 127 aacggagggagta 139
| |||||| ||||
Sbjct: 146 agcggaggaagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||| ||||| ||||||||||||||| || || |||||||||||| | |||||||||
Sbjct: 73 tagatccattaacatctatatgaatgtaaacagtgctagaaagtcttacattatgaaacg 14
Query: 131 gagggagta 139
|||||||||
Sbjct: 13 gagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtc 70
||||||||||| |||||| ||||| ||| |||| ||||||||| |||| ||| |||||
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtc 100
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
||||||||||||||||||| |||| |||||||||||| |||| ||||| | |||||| |
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 123 atgaaacggagggagta 139
|||||||||||| ||||
Sbjct: 123 atgaaacggaggaagta 139
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||| ||||||||||||| ||| ||||||||||||| |||| ||||| | |||||
Sbjct: 79 atatatatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttat 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| ||| |||||||||||| || | ||||| | |||||
Sbjct: 84 atatatttatctagattcattaacattaatatgaatgtggaaaaagttagaatgacttat 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 79.8 bits (40), Expect = 9e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 65 tatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatat 124
|||||||||||| |||| ||||||||||||||||| ||||| ||||| |||| | |||
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 125 gaaacggagggagtat 140
||||||||||||||||
Sbjct: 123 gaaacggagggagtat 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 80 tagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||||||| ||||||||||||||| ||||| |||| | ||||||||||||| ||||
Sbjct: 64 tagcatctatgtgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 9e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 65 tatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatat 124
|||||||| ||||||||| ||| |||||||||||||||||| |||||||||||| | | |
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 125 gaaacgga 132
||||||||
Sbjct: 112 gaaacgga 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 9 atatacttcctccgtttcatattataatactatctattattgcccacattcatat 63
||||||||| ||||||||| | | ||| ||| |||| |||||||||||||||||
Sbjct: 129 atatacttcatccgtttcacaatgtaagactttctagcattgcccacattcatat 75
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| ||||||||||||| |||| | ||| | ||||
Sbjct: 79 atatatatgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| ||||||||||| ||||||
Sbjct: 139 attatgaaacggaaggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| || | ||||||||||||| |||| ||||| | ||||
Sbjct: 84 atatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagtat 140
| | |||||||||||||||||
Sbjct: 24 attgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||||||||||||||||| |||||||| | | |||| ||||| | |||||
Sbjct: 79 atatatatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgacttat 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| ||| ||||||||||||| |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 111
||||||||| |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 84 atatatatgcctagattcattagcatctatatgaatgtggacaatgctagaa 33
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||| |||||||||||||| |||| |||||||||||| |||| ||||| | ||||
Sbjct: 79 atatataagtctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| |||||||||||| |||| ||||| | ||||
Sbjct: 83 atatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttac 142
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 143 attgtgaaacggagggagta 162
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| |||||||| || | |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| ||||||||||||||||||
Sbjct: 24 attatgaaacggagggagta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 9e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||||| |||| ||||| | |||||| | |||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 129 cggagggagtat 140
||||||||||||
Sbjct: 125 cggagggagtat 136
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| |||||||||||| |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||| |||||||||||| |||| ||||| | |||| | | |||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacg 149
Query: 131 gagggagta 139
|||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| ||| ||||||||||| |||||| ||||||||||| |||| |||||||||||
Sbjct: 84 atatatgtgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgc 25
Query: 120 aatatgaaacggagggagta 139
| ||||||||||||| ||||
Sbjct: 24 attatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||||||||||||||| ||||||| | | | ||||||| ||||||||||||
Sbjct: 78 catatatatgtctagattcattaacatctatgggtacataggcaatgttagaaagtctta 137
Query: 119 taatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 138 cattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| ||||||||||||| |||| || || | ||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| ||| ||||||||||||| |||| || || | |||||
Sbjct: 79 atatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgacttat 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 139 attgtgaaacggaggaagta 158
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 79.8 bits (40), Expect = 9e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| ||||||||||| |||| ||||||||||||| |||| ||||| | |||||| |
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 124 tgaaacggagggagta 139
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
|||||||||||||| ||||||||||||| |||| ||||| | |||| | |||||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 133 gggagta 139
|||||||
Sbjct: 132 gggagta 138
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
|||||||||||||| ||||||||||||| |||| ||||| | |||| | | |||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 133 gggagta 139
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||||||||| || | || ||||||||||||| |||| ||||| | ||||
Sbjct: 79 atatatatgtctagattcactaacctccatatgaatgtgggaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagt 138
| |||||||||||||||||
Sbjct: 139 attatgaaacggagggagt 157
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
|||||||| || | ||||||||||| | || |||| ||||| | |||| | |||||||||
Sbjct: 73 tagattcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacg 14
Query: 131 gagggagta 139
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 61 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 120
||||||||||||||||||||| |||| ||||||||||||| |||| ||||| | |||| |
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 121 atatgaaacggagggagta 139
| ||||||||||| ||||
Sbjct: 23 ttgtgaaacggaggtagta 5
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| ||||||||||||| | ||||||| ||||| | |||| | |||||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 147
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 148 cggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||| ||||||||||||| |||| ||||||||||| ||| || ||||| | |||| | ||
Sbjct: 80 atatatctagattcattaacatccatatgaatgtgagcattgctagaatgacttacatta 21
Query: 124 tgaaacggagggagta 139
||||||||||| ||||
Sbjct: 20 tgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 81 agcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||||||||||||| |||||| ||||| | | ||||||||||||||||
Sbjct: 62 agcatctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||||||||| | |||||||||||| | | ||||||||||| ||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 85 tctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||| |||| || ||||||||||||||||||||||||||||||
Sbjct: 59 tctatatgaatgtggataatgctataaagtcttataatatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 87 tatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||| ||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatcta 44
|||||||||||||||||||||||| ||| ||||
Sbjct: 114 tacttcctccgtttcatattataagactttcta 82
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 108/131 (82%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatatatgtct 71
|||||||||||||||| | | ||| || |||| ||| ||||||||||||| ||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgtct 73
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
||||||||||||||| |||| ||| |||| |||| || || | |||| | | || |||||
Sbjct: 72 agattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacgg 13
Query: 132 agggagtatta 142
|||||||||||
Sbjct: 12 agggagtatta 2
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||| ||||||||||||| |||| ||||| |||||| | | ||||||||||| ||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||
Sbjct: 60 atatatgtgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtctta 2
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||
Sbjct: 54 catatatatgtctagattcatttacatctatatgaatgtgtgtgatgctagaaagtctta 113
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||||||||||| ||||| |||| ||||||||||||| |||| ||||| | |||| |
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 122 tatgaaacggagggagta 139
||||||||||||| ||||
Sbjct: 112 tatgaaacggaggaagta 129
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
||||||| ||||||||||| ||||||| | |||||||||||| |||||| ||||| | |
Sbjct: 81 tatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacatt 22
Query: 123 atgaaacggagggagtat 140
|||||||||||||||||
Sbjct: 21 gtgaaacggagggagtat 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||| ||||||||| | |||| |||||||||||||| | || |||||||| ||||
Sbjct: 82 catctaaatgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatg 125
|||||||||||||||| || ||| ||||||||||| |||| |||||||||||| | | ||
Sbjct: 78 atgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtg 19
Query: 126 aaacggagggagta 139
||||||||| ||||
Sbjct: 18 aaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||||||||| || ||| ||||| |||||||||||| | | |||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 131 gagggagta 139
|||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 50 atatatatgtctagattcattaacatatatatgaatgtgggcaatg 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||| ||||||||||||| ||| |||||||||||||||||||
Sbjct: 43 atatatatctagattcattaacatatatatgaatgtgggcaatg 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 attgcccacattcatatatatgt 69
|||||||||||||||||||||||
Sbjct: 6 attgcccacattcatatatatgt 28
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 47 attgcccacattcatatatatgt 69
|||||||||||||||||||||||
Sbjct: 85 attgcccacattcatatatatgt 63
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||| ||| ||||||||||||| ||| |||| |||||||||||| | |||||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 127 aacggaggga 136
||||||||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||||||||||||||||| |||| |||||||| |||| |||| || || | ||||||
Sbjct: 72 atatatgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatat 131
Query: 122 tatgaaacggagggagta 139
| ||||||||||||||||
Sbjct: 132 tgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtc 115
||||||||||||||| |||| |||||||||||||||||| |||||||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtc 115
|||| ||||||||||||| |||| |||||||||||||||||| |||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||| |||||| ||||||||||| |||| ||||||||||||| |||| ||||| | ||||
Sbjct: 77 catacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 136
Query: 119 taatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 137 cattgtgaaacggagggagta 157
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
|||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 130 ggagggagta 139
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||||||||| ||||| |||||| |||||||||||| | | |||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 131 gagggagta 139
|||| ||||
Sbjct: 150 gaggaagta 158
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
|||||| |||| |||||| ||||||||| ||||| |||||||||||||| | |||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 131 gagggagta 139
|||||||||
Sbjct: 116 gagggagta 124
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 84 atctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
||||| |||||||||||||||| || ||||||||| | ||| |||||||
Sbjct: 60 atctaaatgaatgtgggcaatgctaaaaagtcttacattataaaacgga 12
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcat 61
|||| ||||||||||| | ||||| ||| |||| |||||| |||||||||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcat 75
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
||||||||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | |
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 123 atgaaacggagggagta 139
||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||||||||||||||||| |||| ||||| | |||| | | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 131 gagggagta 139
|||||||||
Sbjct: 13 gagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 84 atctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||||||| |||| ||||| | |||| | | ||||||||||||||||
Sbjct: 69 atctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 81 agcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
||||||||||||||| ||||||||| |||||||||||| | ||||||||||||
Sbjct: 63 agcatctatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| |||||||||||| ||| ||||| | ||||
Sbjct: 78 atatatatgtctagattcattaacatcaatatgaatgtggaaaatattagaatgacttac 137
Query: 120 aatatgaaacggagggagtat 140
| | |||||||||||||||||
Sbjct: 138 attgtgaaacggagggagtat 158
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | |||||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatga 139
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 140 aacggagggagta 152
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatg 125
||||||||||||||| |||| ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 78 atgtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtg 19
Query: 126 aaacggagggagtat 140
||||||||| |||||
Sbjct: 18 aaacggaggaagtat 4
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| |||| |||||| |||| ||||| | |||||
Sbjct: 79 atatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggcttat 138
Query: 120 aatatgaaacggagggagtat 140
| | |||||||||||||||||
Sbjct: 139 attgtgaaacggagggagtat 159
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| ||| ||||||||||||| |||| || || | |||||
Sbjct: 84 atatatctatctagattcattaacataaatatgaatgtgggaaatgctacaatgacttat 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| || | ||||||||||||| ||| ||||| | ||||
Sbjct: 79 atatatatgtctagattcattaacaacaatatgaatgtgggaaatactagaatgacttac 138
Query: 120 aatatgaaacggagggagtat 140
| | |||||||||||||||||
Sbjct: 139 attgtgaaacggagggagtat 159
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| |||| ||||| |||||| |||| ||||| | ||||
Sbjct: 84 atatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| ||||||||||| |||| |||||||||||| |||| ||||| | |||||| |
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 124 tgaaacggagggagta 139
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| |||||||| |||| |||| | ||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||||||||||||||||| ||||| ||||| | |||| || || | ||||
Sbjct: 79 atatatatgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||| |||||||||||||||| |||||||| || | |||| ||||| | |||||
Sbjct: 79 atatatatgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttat 138
Query: 120 aatatgaaacggagggagta 139
| | || |||||||||||||
Sbjct: 139 attgtggaacggagggagta 158
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 68 gtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaa 127
||||||||||||||||||| |||||||| |||| ||| ||||| | |||| | ||||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 128 acggagggagta 139
||||||||||||
Sbjct: 125 acggagggagta 136
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| || | |||| |||||||| |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||| |||||||||||||||| || |||||||||||||| |||| ||||| | ||||
Sbjct: 79 atatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 61 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 120
||||||| ||||||||||||| || ||||||||||||||| |||| ||||| | |||| |
Sbjct: 83 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 24
Query: 121 atatgaaacggagggagta 139
|||| |||||| ||||||
Sbjct: 23 ttatggaacggaaggagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 111
|||||||||||||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 53 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 111
|||||| | ||||||||||||| |||| ||||||||||| | |||| |||||
Sbjct: 58 atatatctatctagattcattaacatcaatatgaatgtgagaaatgctagaa 7
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| ||| ||||||||||| | |||| ||||| | ||||
Sbjct: 79 atatatatgtctagattcattaacattaatatgaatgtgagaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
|||||||||||| |||| |||||||| |||| |||| ||||| | |||| | | ||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaac 15
Query: 130 ggagggagta 139
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 71.9 bits (36), Expect = 2e-12
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 52 ccacattcatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 111
|||||||||||| |||| ||||||||||| |||| ||||||||||||| ||| |||||
Sbjct: 45 ccacattcatattgatgtttagattcattaacatcaatatgaatgtgggatatgctagaa 104
Query: 112 agtcttataatatgaaacggagggagta 139
| |||||| | ||||||||||| ||||
Sbjct: 105 tgacttatattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 96 gtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccac 55
|||||||||||||||||||||||| ||| |||| |||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgcccac 44
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 107 tagaaagtcttataatatgaaacggagggagtatt 141
||||||||||||||| |||||| |||||||||||
Sbjct: 37 tagaaagtcttataacctgaaacagagggagtatt 3
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| |||| |||||||| |||| |||| | ||| | ||||
Sbjct: 77 atatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttac 136
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 137 attgtgaaacggagggagta 156
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| |||| ||||||||||||| |||| ||||| | ||||
Sbjct: 84 atatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||| |||||||| |||| ||||||||||||| ||| ||||| | ||||
Sbjct: 79 atatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 139 attgtgaaacggaggaagta 158
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| ||| |||||||||||| |||| ||||| | ||||
Sbjct: 79 atatatatgtctagattcattaacattaatatgaatgtggagaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 111
|||||||||||||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 58 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaa 111
||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| |||||||||| || |||| ||||| | |||| | |||||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 113 cggagggagta 123
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatg 105
||||||||||||||| |||||||||||| ||||||||||||| ||||
Sbjct: 51 catatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||||||||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 66 catatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatg 92
||||||||||||||| || |||||||| ||||||
Sbjct: 75 catatatatgtctagttttattagcatatatatg 42
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 120
||||||||||||||||||||||||| ||||||||||| | |||| ||||| | ||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttata 106
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaa 111
||||||||||||| ||||||||||| | |||| |||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaa 12
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||||| |||| || || | |||| | |||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | |||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 138
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 139 cggagggagta 149
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatg 125
|||||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | ||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 126 aaacggagggagta 139
||||||||| ||||
Sbjct: 18 aaacggaggaagta 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||| |||||||||||||||||| |||| ||||||| |||| || || | ||||||
Sbjct: 75 atatatctctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatat 134
Query: 122 tatgaaacggagggagtat 140
| |||||||||||||||||
Sbjct: 135 tgtgaaacggagggagtat 153
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||||| |||| || || | |||| | |||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
||||||| |||||||||| |||| |||| || ||||| |||| ||||| | |||||| |
Sbjct: 81 atatgtccagattcattaacatcaatataaacgtgggaaatgctagaatgacttatattg 140
Query: 124 tgaaacggagggagtatt 141
||||||||||| ||||||
Sbjct: 141 tgaaacggaggaagtatt 158
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
||||||||| ||||||||||||||||| || || |||||||||||||| |||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacgga 132
Query: 133 gggagta 139
|| ||||
Sbjct: 133 ggaagta 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||| ||| || || ||||||||||||||| ||||||||||||||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataacctgaaacggagggagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | |||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 126 cggagggagta 136
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
||||| |||||||||||||| ||||||||| || |||||||| ||||| | |||| |
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 122 tatgaaacggagggagta 139
||||||||||||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 84 atctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||||||||||| | ||||| ||||| | |||| | ||||||||||||| ||||
Sbjct: 81 atctatatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||| ||||||||||||| ||| ||||||||||||| |||| ||||| | |||| | ||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 124 tgaaacggagggagtatt 141
||||||||||| ||||||
Sbjct: 100 tgaaacggaggaagtatt 117
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 75 ttcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagg 134
||||||| |||| ||||||||||||| ||| |||||| | |||||| | |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 135 gagtat 140
||||||
Sbjct: 9 gagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 10 tatacttcctccgtttcatattataatactatctattattgcccacattcatat 63
|||||| ||||||||||| | ||||| | ||||||||| |||||||||||||
Sbjct: 3 tatactccctccgtttcacaatataagtcattctattatttcccacattcatat 56
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/89 (85%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 51 cccacattcatatatatgtctagattcattagcatctatatgaatgtgggcaatgataga 110
||||||||||||| ||| |||||||||||| |||| ||||||||||| |||||||||
Sbjct: 44 cccacattcatatctat--ctagattcattaacatcaatatgaatgtgaaaaatgataga 101
Query: 111 aagtcttataatatgaaacggagggagta 139
| | |||| | ||||||||||||| ||||
Sbjct: 102 atggcttacattatgaaacggaggaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||| |||| ||||| | |||||| | ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| |||| |||||||| |||| |||| ||||| | |||| | | |||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 127 aacggagggagta 139
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 65.9 bits (33), Expect = 1e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| |||||||| || |||||| |||||||||| ||||| |||||||||||| | |
Sbjct: 65 atatgtttagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattg 123
Query: 124 tgaaacggagggagtat 140
||||||||||| |||||
Sbjct: 124 tgaaacggaggaagtat 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
|||||||| | |||||| ||||| ||||||| |||| | | ||||||||||| |||||
Sbjct: 61 catctatacgtatgtggccaatgctagaaaggcttagattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||||||| ||||||||| |||||| ||||||||||| |||| || || | ||||
Sbjct: 85 catatatatgtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgactta 26
Query: 119 taatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 25 cattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
|||||||||| ||||||||||| |||||||||||||||| |||| || || | |||
Sbjct: 76 catatatatgcatagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttg 135
Query: 119 taatatgaaacggagggagta 139
| ||||||||||||||||||
Sbjct: 136 cattatgaaacggagggagta 156
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 55 cattcatatatatgtctagattcattagcatctatatgaat 95
||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 48 cattcatatatatgtctagattcattatcatcaatatgaat 88
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| |||| |||||||| |||| |||| ||||| | |||| | | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| ||| |||| |||||||| |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagtat 140
| | ||||||||||| |||||
Sbjct: 24 attgtgaaacggaggaagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||||| |||| ||||||||||||| |||| ||||| | |||| | | |||||||| |
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgggg 142
Query: 134 ggagta 139
||||||
Sbjct: 143 ggagta 148
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| |||||||| |||| |||| ||||| | |||| | |||||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 129 cggagggagtatt 141
|||||| ||||||
Sbjct: 130 cggaggaagtatt 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| |||||||| |||| |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||||||||||||||||| ||||||||||| |||| ||||| | |||||| |||||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 129 cggagggagtat 140
| |||| |||||
Sbjct: 15 cagaggaagtat 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||| ||||||||||||| |||| || || | |||| | ||||||||||||||||||
Sbjct: 82 catcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
||||||||||||||| ||||||||||| | |||| ||||| | |||||| | ||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 132 agggagta 139
||| ||||
Sbjct: 128 aggaagta 135
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctt 117
|||||||||||||||| | ||||| ||||||||||||||| | |||||||||
Sbjct: 90 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||||||||||||||| | ||||| |||||||||||||||
Sbjct: 54 atatgtctagattcattaacttctatgtgaatgtgggcaatg 13
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 atatgaatgtgggcaatgatagaaagtctta 118
|||||||||||||||||| | ||||||||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtctta 81
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataata 123
|||||| ||||||||||| |||| ||||||||||||| |||| ||||| | |||| | |
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 124 tgaaacggagggagta 139
|||||||||| |||||
Sbjct: 20 tgaaacggagagagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 68 gtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaa 127
|||||||| |||| ||||| ||||||||||||| |||| | ||| | |||| | ||||||
Sbjct: 84 gtctagatccattggcatcaatatgaatgtgggaaatggtggaatgacttacattatgaa 143
Query: 128 acggagggagta 139
||||||||||||
Sbjct: 144 acggagggagta 155
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||||||||||||| ||| ||||||||||||| ||| ||||| | |||||| | |||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 129 cggagggagta 139
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||| ||||||||||| |||| |||||||| ||| |||| ||||| | ||||
Sbjct: 84 atatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 24 attgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| |||| ||||||||||||| |||| ||||| | ||||
Sbjct: 79 atatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 139 attgtgaaacggaggaagta 158
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 61 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 120
||||||||||||||||||||| || ||||||||||||| |||| ||||| | |||| |
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 121 atatgaaacggagggagtat 140
| ||||||||||| |||||
Sbjct: 117 ttgtgaaacggaggaagtat 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtatt 141
||||||||||||| |||| ||||| | |||| | | ||||| ||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagtatt 3
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 65 tatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatat 124
||||||||| ||||||| |||| ||||||||||||| |||| ||||| | |||| | | |
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Query: 125 gaaacggagggagta 139
||||| |||||||||
Sbjct: 132 gaaaccgagggagta 146
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||| |||||||||||| |||| ||||| | |||| | |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 131 gagggagta 139
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
||||||||||||||||||| |||| ||||||||||| | |||| ||||| | |||| |
Sbjct: 81 atatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacat 140
Query: 122 tatgaaacggaggga 136
| |||||||||||||
Sbjct: 141 tgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
||||||||||||||||| ||||||| ||| |||||||||| | |||| | | ||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 130 ggagggagtat 140
|||||||||||
Sbjct: 122 ggagggagtat 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtattat 143
|||||||| || | |||||||||| | |||||| | ||||||||||||| ||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagggactattat 1
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
||||||||||||||||||||| | ||||||||||||| |||| ||||| | |||| |
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 122 tatgaaacggagggagtat 140
| ||||||||||| |||||
Sbjct: 113 tgtgaaacggaggaagtat 131
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||| ||||||||||||||| |||| ||||||||||| | ||| ||||| | |||| |
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 122 tatgaaacggagggagtat 140
||||||||||||| |||||
Sbjct: 22 tatgaaacggaggaagtat 4
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 61 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 111
||||||| ||||||||||||| || ||||||||||||||| |||| |||||
Sbjct: 50 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaa 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgg 99
||||| |||||||||||||||| || ||||||||||||||
Sbjct: 54 atatagatgtctagattcattaacacctatatgaatgtgg 15
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| |||||||||||| |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||| | |||| ||||| | |||||| | |||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 129 cggagggagta 139
|||||| ||||
Sbjct: 117 cggaggaagta 127
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||||||||||||||||||| |||| |||| |||||||| ||||
Sbjct: 84 atatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| ||| ||||||||||||| |||| ||||| | ||||
Sbjct: 79 atatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagta 139
| | ||| ||||||||||||
Sbjct: 139 attgtgatacggagggagta 158
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
||||||||||||||||| ||||||||||||| |||| || || | |||| | | ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 130 ggagggagta 139
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | |||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 127 aacggagggagtat 140
|||||||| |||||
Sbjct: 17 aacggaggaagtat 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||| ||||||||||||| |||| ||||| | |||| | ||||||||||||||||||
Sbjct: 79 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||||| |||||||||||||||||||| | |||||||||||| | | |||||| |||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 134 ggagta 139
| ||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 70 ctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaac 129
||||||||||||||||| ||||||||||||| |||| || || | |||| | | ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 130 ggagggagta 139
||||| ||||
Sbjct: 134 ggaggaagta 143
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtc 115
|||||||||||||||| | ||||| ||||||||||||||| | |||||||
Sbjct: 50 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtc 1
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 64 atatgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||||||||||||||| | ||||| |||||||||||||||
Sbjct: 86 atatgtctagattcattaacttctatgtgaatgtgggcaatg 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 88 atatgaatgtgggcaatgatagaaagtctta 118
|||||||||||||||||| | ||||||||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtctta 59
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||||||||||| |||||||| ||| |||||||||||| |||| |||| | |||||
Sbjct: 84 atatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttat 25
Query: 120 aatatgaaacggagggagtat 140
| | ||||||||||| |||||
Sbjct: 24 attgtgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 59 catatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtctta 118
||||||||| ||||||||||||| ||| |||||||||| |||| ||||| | ||||
Sbjct: 76 catatatatatctagattcattaacatgagtatgaatgtgaaaaatgctagaatgactta 135
Query: 119 taatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 136 cattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||| |||||||||||| |||| ||||| | |||| | |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 131 gagggagta 139
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 87 tatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||| ||| ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 53 tatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 100 gcaatgatagaaagtcttataatatgaaacggagggagtat 140
|||||| |||||||||||||| ||| ||||||||| |||||
Sbjct: 44 gcaatgctagaaagtcttatattataaaacggaggaagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcatattataatactatctattattgcccacattcatatata 66
|||||||||||| ||||| ||||| ||| |||| |||| ||| |||||||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcatatata 51
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | ||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 131 gagggagta 139
|||||||||
Sbjct: 122 gagggagta 130
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||| || |||||| |||||||||||| | | | ||||||||||||||
Sbjct: 52 catctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||||||||| |||| ||||| | |||||| | |||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 58.0 bits (29), Expect = 3e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
|||||||||||||||| || |||| ||| |||||||| |||| ||||| | |||| | |
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 123 atgaaacggagggagta 139
|| ||||||||||||||
Sbjct: 122 ataaaacggagggagta 138
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||| ||||||||||| | |||| ||||| | |||| | ||||||||||||||||||
Sbjct: 61 catccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 87 tatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||| |||||||||| | |||| | ||||||||||||||||||
Sbjct: 57 tatatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 74/90 (82%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 52 ccacattcatatatatg--tctagattcattagcatctatatgaatgtgggcaatgatag 109
|||||||||||||||| ||||||||||||| ||| |||||||| ||| |||| |||
Sbjct: 45 ccacattcatatatattcatctagattcattaacattaatatgaatatggaaaatgctag 104
Query: 110 aaagtcttataatatgaaacggagggagta 139
|| | |||| | | ||||||||||| ||||
Sbjct: 105 aaggacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 68 gtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaa 127
|||||||||||||| |||| |||||||| ||| |||| ||||| | |||| | | ||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 128 acggagggagta 139
||||||||||||
Sbjct: 134 acggagggagta 145
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||||||||||||||||| ||||||||||| |||| ||||| |||| | | |||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 129 cggagggagtat 140
||||||||||||
Sbjct: 15 cggagggagtat 4
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| |||| ||||||||||||| |||| ||||| | |||| | | ||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 132 agggagta 139
||| ||||
Sbjct: 12 aggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 78 attagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggag 137
|||| |||| ||||||||||||| |||| ||||| | |||| | ||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 138 ta 139
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 112 agtcttataatatgaaacggagggagta 139
||||||||||||||||||||||||||||
Sbjct: 32 agtcttataatatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 114 tcttataatatgaaacggagggagta 139
||||||||||||||||||||||||||
Sbjct: 46 tcttataatatgaaacggagggagta 71
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 66 atgtctagattcattagcatctatatgaatgtgggcaatgatag 109
||||||||||||||| |||| ||||||||||||| ||||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatgatag 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||||||||||| |||| ||||||||||||| ||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| | || ||||||||||||| |||| ||||| | ||||
Sbjct: 84 atatatctatctagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||| ||||||||||||| |||| |||| |||||||| ||| || || | ||||
Sbjct: 79 atatatatttctagattcattaccatcaatattaatgtgggaaattctaaaatgacttag 138
Query: 120 aatatgaaacggagggagta 139
| | ||||||||||||||||
Sbjct: 139 attgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||| ||||| |||| |||||||||||| |||| ||||| | |||| | | |||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 129 cggagggagtat 140
||||||||||||
Sbjct: 15 cggagggagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||| ||||| |||| ||||||||||||| |||| ||||| | |||| | | || ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 131 gagggagtat 140
|||| |||||
Sbjct: 138 gaggaagtat 147
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||| | ||||||||||||| |||| ||||||||||| | |||| ||||| | ||||
Sbjct: 84 atatatctatctagattcattaacatcaatatgaatgtgagaaatggtagaatgacttac 25
Query: 120 aatatgaaacggagggagta 139
| | ||||||||| ||||||
Sbjct: 24 attgtgaaacggaaggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||||||||||||||||| ||| | |||||| | | |||| ||||| | ||||
Sbjct: 79 atatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagtatta 142
| | |||||||||||||||||||
Sbjct: 139 attgtgaaacggagggagtatta 161
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 77 cattagcatctatatgaatgtgggcaatgatagaaagtct 116
||||||||||||||||||| ||||||||| | ||||||||
Sbjct: 96 cattagcatctatatgaatatgggcaatgcttgaaagtct 57
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 85 tctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||| || |||||| | |||||||||||| |||||||| |||| ||||
Sbjct: 59 tctatatgaatatgtgcaatgcttgaaagtcttatagtatgaaacagaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 109 gaaagtcttataatatgaaacggagggagta 139
|||||||||||| ||||||||||||||||||
Sbjct: 100 gaaagtcttatagtatgaaacggagggagta 130
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
|||||||| |||||||| |||| |||| |||||||||||| ||| ||||| | ||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 120 aatatgaaacggagggagta 139
| |||||||| |||||||||
Sbjct: 125 attatgaaacagagggagta 144
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
||||||||| |||| ||||||||||||| |||| ||||| | |||| | | |||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 133 gggagta 139
|| ||||
Sbjct: 11 ggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
||||||||| |||| ||||||||||| | |||| ||||| | ||| | | |||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 133 gggagta 139
|||||||
Sbjct: 135 gggagta 141
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaa 111
|||||||||||||| ||||||||||||| |||| |||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaa 7
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaa 111
|||||||||||||| ||||||||||||| |||| |||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaa 84
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| ||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
|||||||||||||||||| ||| ||||||||||| | |||| ||||| | |||| | |
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 123 atgaaacggaggga 136
|||||||||||||
Sbjct: 122 gtgaaacggaggga 135
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 63 tatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataat 122
|||||||||||||||||||||||| |||| ||| || | |||| || || | |||| | |
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 123 atgaaacggagggagtat 140
||||||||||| |||||
Sbjct: 21 gtgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 8e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 80 tagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||| |||||||||||| |||| || || | |||||| | ||||||||||||||||
Sbjct: 80 tagcatcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
Query: 140 t 140
|
Sbjct: 140 t 140
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgataga 110
||||||||||||| |||| ||||||||||||| |||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgg 99
|||||| ||||||||||||| |||| ||||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtgg 90
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtatt 141
||||||||||||| |||| ||||| | |||||| | ||||||||||| ||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtatt 138
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||| | |||| ||||||||||||| |||| ||||| | |||| | | ||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 134 ggagta 139
||||||
Sbjct: 10 ggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
|||||||||| || | |||| ||||||||||||| |||| ||||| | |||| | | |||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 127 aacggagggagta 139
|||||||| ||||
Sbjct: 132 aacggaggaagta 144
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
|||||||| || ||||||||| ||| || | |||| ||||| | |||| | |||||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 131 gagggagtat 140
||||||||||
Sbjct: 13 gagggagtat 4
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtatt 141
||||||||||||| |||| ||||| | |||||| | ||||||||||| ||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtatt 138
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 121
|||||| ||||||||||||| ||| |||| ||| |||| |||| ||||| | |||| |
Sbjct: 80 atatatatctagattcattaacattaatataaatatgggaaatgttagaatgacttacat 139
Query: 122 tatgaaacggagggagta 139
| ||||||||||||||||
Sbjct: 140 tgtgaaacggagggagta 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | ||||
Sbjct: 75 tctagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaa 16
Query: 129 cggagggagtat 140
|||||| |||||
Sbjct: 15 cggaggaagtat 4
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 130
||||||||||| ||| |||||||| || | |||| ||||| | |||| | |||||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 131 gagggagta 139
|||||||||
Sbjct: 118 gagggagta 126
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 50.1 bits (25), Expect = 8e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| |||||| || ||||||| |||| ||||||| |||| | | ||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 132 aggga 136
|||||
Sbjct: 111 aggga 115
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 119
||||| ||||||| |||||||| |||| ||||||||| || ||| ||||| | ||||
Sbjct: 79 atatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaatgacttac 138
Query: 120 aatatgaaacggagggagtat 140
| | |||||||||||||||||
Sbjct: 139 attgtgaaacggagggagtat 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| |||||||| | || |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaa 16
Query: 129 cggagggagta 139
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 67 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 126
||||||||||||||| |||| ||||||||||| | ||| || || | |||| | | |||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 127 aacggagggagta 139
|||||||||||||
Sbjct: 135 aacggagggagta 147
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 83 catctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||| ||||||||||||| |||| ||||| | |||| | | ||||||||||||||||
Sbjct: 61 catcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 76 tcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggaggg 135
|||||| |||| ||||||||||||| |||| ||||| | |||| | | |||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 136 agtat 140
|||||
Sbjct: 127 agtat 131
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 85 tctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||| ||| ||| | ||| || ||||||||| | |||||||||||||||||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtcttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 76 tcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggaggg 135
|||||| |||| |||||||||||| |||| ||||| | |||| | | ||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 136 agta 139
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 129 cgga 132
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 85 tctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||||| ||| ||| | ||| || ||||||||||| | |||||||||||||||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtcttatattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| ||||||||||| | |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 129 cgga 132
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||| |||| ||||| | |||||| | ||||||||||| ||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 60 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 111
|||||| | ||||||| ||||| |||| ||||||||||||| |||| |||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaa 111
||||||| ||||| |||| ||||||||||||| |||| |||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 72 agattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgg 131
|||||||||| ||| || |||||||||| |||| ||||| | |||||| | ||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 132 agggagta 139
||| ||||
Sbjct: 128 aggaagta 135
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 100 gcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||| ||||||| |||| | ||||||||||||||||||
Sbjct: 44 gcaatgctagaaagacttacattatgaaacggagggagta 83
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 74 attcattagcatctatatgaatgtgggcaatg 105
||||||||||||| ||||||||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatg 80
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 88 atatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||||| |||| ||||| | |||||| | ||||||||||| ||||
Sbjct: 63 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 62 atatatgtctagattcattagcatctatatgaatgtgggcaatg 105
|||||||||||||||||| | |||| |||| |||||||| ||||
Sbjct: 82 atatatgtctagattcataaacatcaatataaatgtgggaaatg 39
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 85 tctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||||| || || |||||| || ||||| ||| | ||||||||||||||||||
Sbjct: 59 tctatatgtatatgagcaatgctataaagtattacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||||| |||||||||| || || |||||| || || |||||| | | ||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 134 ggagta 139
| ||||
Sbjct: 132 gaagta 137
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 81 agcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||| ||||||| ||||| |||| ||||| | |||| | | ||||||||||||||||
Sbjct: 63 agcatcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 102 aatgatagaaagtcttataatatgaaacggagggagtat 140
|||| ||||| | |||||| |||||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 85 tctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
|||||||| || || |||||| || ||||| ||| | ||||||||||||||||||
Sbjct: 83 tctatatgtatatgagcaatgctataaagtattacattatgaaacggagggagta 137
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||||| |||||||||| || || |||||| || || |||||| | | ||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 134 ggagta 139
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
|||| ||||||||||||| |||||||||| | |||| ||||| | ||| | | |||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 73 gattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacgga 132
||||||||| |||| ||||||||||||| |||| || || | |||| | | |||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 133 gggagta 139
|| ||||
Sbjct: 128 ggaagta 134
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 69 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 128
||||||||||||| |||| |||||||| | | |||| ||||| | |||| | | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 129 cggagggagta 139
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;EU730898.1/54746-54622 15368:Brachypodium
distachyon
Length = 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 122 tatgaaacggagggagtattat 143
||||||||||||||||||||||
Sbjct: 22 tatgaaacggagggagtattat 1
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 94 atgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||| |||| ||||| | |||| | ||||||||||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AC124836.2/101751-101630 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 115 cttataatatgaaacggagggagtat 140
|||||||||||| |||||||||||||
Sbjct: 29 cttataatatgagacggagggagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 cttataatatgaaacggagggagtat 140
||||||||||| ||||||||||||||
Sbjct: 94 cttataatatggaacggagggagtat 119
>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa Indica
Group
Length = 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 115 cttataatatgaaacggagggagtat 140
||||||||||| ||||||||||||||
Sbjct: 29 cttataatatggaacggagggagtat 4
>RF00906;MIR1122;AACV01025230.1/832-919 39947:Oryza sativa Japonica
Group
Length = 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 tcttataatatgaaacggagggagta 139
||||||||| ||||||||||||||||
Sbjct: 59 tcttataatctgaaacggagggagta 84
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 90 atgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagta 139
||||||||||| |||| ||||| | |||| | | ||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 74 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 133
|||||||| |||| |||||||||| || |||| ||||| | |||| | | ||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 134 ggagta 139
| ||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AP005912.3/116369-116237 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 cttataatatgaaacggagggagtat 140
|||||||||||| |||||||||||||
Sbjct: 105 cttataatatgagacggagggagtat 130
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 tcttataatatgaaacggagggagta 139
||||||| ||||||||||||||||||
Sbjct: 112 tcttatattatgaaacggagggagta 137
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 75 ttcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagg 134
||||||| |||| ||| |||||||| |||| ||||| | |||| | | |||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 135 gagtat 140
||||||
Sbjct: 117 gagtat 122
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 61 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 120
|||| ||||||||||| |||| |||| |||||||| |||| |||| || || | ||| |
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 121 atatgaaacggagggagtatta 142
| ||||||||||| |||||||
Sbjct: 118 ttgtgaaacggaggaagtatta 139
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 87 tatatgaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 140
||||| |||||||| |||| ||||| | |||| | | |||||||||||||||||
Sbjct: 57 tatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtat 4
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 tagattcattagcatctatatgaatgtggg 100
||||||||||| |||||||||| |||||||
Sbjct: 30 tagattcattaacatctatatgtatgtggg 1
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 tagattcattagcatctatatgaatgtggg 100
||||||||||| |||||||||| |||||||
Sbjct: 34 tagattcattaacatctatatgtatgtggg 63
