miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AP008214.1/27600377-27600200 39947:Oryza sativa
Japonica Group
Length = 178
Score = 176 bits (89), Expect = 7e-44
Identities = 133/153 (86%)
Strand = Plus / Minus
Query: 22 accgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagatgataa 81
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 153 accgttcgtcttatttgaaaattttttatgattactatttttattgttattagatgataa 94
Query: 82 aacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaattttcaaa 141
||||||||||| |||||||||||||||| |||||| |||||||| ||||||||
Sbjct: 93 aacatgaatagtactttatgtgtgactaattttttttaaaattttcataaatttttcaaa 34
Query: 142 taaaacggacggtcaaacgttggacacggattt 174
||| |||||||||||||||||||||||||||||
Sbjct: 33 taagacggacggtcaaacgttggacacggattt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AP008210.1/34581048-34581220 39947:Oryza sativa
Japonica Group
Length = 173
Score = 163 bits (82), Expect = 1e-39
Identities = 113/126 (89%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| ||||| |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 66 aactttttttaattttttcataaaattttcaaataagacggacggtcaaacgttagacac 7
Query: 169 ggattt 174
||||||
Sbjct: 6 ggattt 1
>RF01062;MIR812;AAAA02028052.1/7218-7389 39946:Oryza sativa Indica
Group
Length = 172
Score = 145 bits (73), Expect = 2e-34
Identities = 134/158 (84%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| ||||| ||||||||||||| | ||||||||||||||||||||
Sbjct: 163 tccaacgtttaaccgtccgtcttatttgaaaaacttttacgattactatttttattgtta 104
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcata 130
||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 103 ttagatgataaaacatgaataatactttatgtgtgactattttttt-ttattttttcata 45
Query: 131 aaattttcaaataaaacggacggtcaaacgttggacac 168
|| || |||||||| |||||||||||||||||||||||
Sbjct: 44 aacttatcaaataagacggacggtcaaacgttggacac 7
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| ||||||||| ||||||||||||
Sbjct: 132 ttttcaaataagacggacggttaaacgttggaca 165
>RF01062;MIR812;ABRL01001958.1/15569-15396 65489:Oryza barthii
Length = 174
Score = 141 bits (71), Expect = 4e-33
Identities = 134/159 (84%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 17 gtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagat 76
|||| ||||||||||||||||||| ||| |||||||||| |||||||||||||
Sbjct: 159 gtttgaccgttcgtcttatttgaaatttttttatgtttactattttcattgttattagat 100
Query: 77 gataaaacatgaatagaactttatgtgtgact-atttttttnnnnnnnnttcataaaatt 135
|||||||||||||||||||||||||| || || |||||||| |||||||| ||
Sbjct: 99 gataaaacatgaatagaactttatgtatggctaatttttttttaaaattttcataaattt 40
Query: 136 ttcaaataaaacggacggtcaaacgttggacacggattt 174
||||||||| |||||||||||||||||||| ||||||||
Sbjct: 39 ttcaaataagacggacggtcaaacgttggatacggattt 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 9 tatccaacgtttcaccgttcgtcttatttgaa 40
|||||||||||| ||||| |||||||||||||
Sbjct: 8 tatccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AACV01025027.1/104825-104997 39947:Oryza sativa
Japonica Group
Length = 173
Score = 141 bits (71), Expect = 4e-33
Identities = 139/167 (83%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| ||||||| | ||||||||| |||||||||||||
Sbjct: 173 ctattcatctccaacgtttgaccgttcatattatttgaaatttttttatgattactattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||| |
Sbjct: 113 ttattattattagataataaagcatgaatagtactttatgtgtgactatttttctaataa 54
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| ||||||||||| |||||| ||||||||||||||||
Sbjct: 53 attttcataaatttttcaaataagacggacagtcaaacgttggacac 7
>RF01062;MIR812;AAAA02007524.1/33468-33642 39946:Oryza sativa Indica
Group
Length = 175
Score = 137 bits (69), Expect = 6e-32
Identities = 112/128 (87%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 128 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 69
Query: 109 a--tttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggac 166
| |||||| ||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 68 agtttttttaaaaaaaaaatcataaatttttcaaataagacggatggtcaaacgttggac 9
Query: 167 acggattt 174
||||||||
Sbjct: 8 acggattt 1
>RF01062;MIR812;AAAA02014397.1/14648-14476 39946:Oryza sativa Indica
Group
Length = 173
Score = 137 bits (69), Expect = 6e-32
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||| ||| ||||||||||||||||||||| |||||| ||||||||
Sbjct: 126 atgattaatatttttatttttactagatgataaaacatgaatagtactttacgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| |||||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 66 atttttttttaattttttcataaattttttaaataagacggacggtcaaacgttggacac 7
Query: 169 ggatt 173
|||||
Sbjct: 6 ggatt 2
>RF01062;MIR812;AACV01004255.1/9861-10031 39947:Oryza sativa
Japonica Group
Length = 171
Score = 137 bits (69), Expect = 6e-32
Identities = 136/162 (83%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| |||||| |||||||||||| ||||||| |||||||||| |||
Sbjct: 162 tccaacgtttaaccgtttgtcttatttgaaatttttttatgattagtatttttattatta 103
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcata 130
|||||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 102 ttagatgataaaacatgaatagtactttatgtgtgactattttttt--aatttttttata 45
Query: 131 aaattttcaaataaaacggacggtcaaacgttggacacggat 172
|| ||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 44 aatttttcaaataagacgaacggtcaaatgttggacacggat 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||| ||| |||||||||||||||||||
Sbjct: 10 tccaacatttgaccgttcgtcttatttgaa 39
>RF01062;MIR812;AACV01014398.1/6458-6286 39947:Oryza sativa Japonica
Group
Length = 173
Score = 131 bits (66), Expect = 3e-30
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagcactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
||||| || ||||||| |||| |||||| | | ||||||| |||||||||||
Sbjct: 66 attttattaaaaaaatttcataatttttttaaataagatgcacggtcatacgttggacac 7
Query: 169 ggattt 174
||||||
Sbjct: 6 ggattt 1
>RF01062;MIR812;AC108762.2/153942-153770 39947:Oryza sativa Japonica
Group
Length = 173
Score = 131 bits (66), Expect = 3e-30
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| | |||| |||||||||||| |||||||||||||
Sbjct: 173 ctattcatctccaacgtttgatcgtttgtcttatttgaattttttttatgattactattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
|||||| |||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 113 ttattgctattagataataaaacatgaataatactttatgtgtgactatttttttaaaaa 54
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgttg 163
|||||||| ||||||||||| ||| ||||||||| ||||
Sbjct: 53 aatttcataaatttttcaaataagacgaacggtcaaatgttg 12
>RF01062;MIR812;AP004165.3/53439-53268 39947:Oryza sativa Japonica
Group
Length = 172
Score = 131 bits (66), Expect = 3e-30
Identities = 110/126 (87%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| |||
Sbjct: 125 atgattaatatttttattgttattagataataaaacatgaatagtactttatgtgtaact 66
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| |||||| || ||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 65 a-ttttttaaaatttttttataaacttttcaaataaaacggacggttaaacgttggacac 7
Query: 169 ggattt 174
||||||
Sbjct: 6 ggattt 1
>RF01062;MIR812;AP008208.1/1936493-1936324 39947:Oryza sativa
Japonica Group
Length = 170
Score = 131 bits (66), Expect = 3e-30
Identities = 127/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||
Sbjct: 161 tccaacgtttaaccgtccgtcttatttgaaaatttttaatgattagtatttttattgtta 102
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcata 130
||||||||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 101 ttagatgataaaacatgaatattactttatgcgtgactattttttt--aatcttttcata 44
Query: 131 aaattttcaaataaaacggacggtcaaacgt 161
|||||||||||||| ||| ||||||||||||
Sbjct: 43 aaattttcaaataagacgaacggtcaaacgt 13
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttggacacg 169
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 126 aaaattttcaaataagacggacggttaaacgttggacacg 165
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 acgtttcaccgttcgtcttatttgaa 40
|||||| |||||||||||||||||||
Sbjct: 13 acgtttgaccgttcgtcttatttgaa 38
>RF01062;MIR812;AY946549.1/36-208 4530:Oryza sativa (rice)
Length = 173
Score = 131 bits (66), Expect = 3e-30
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtattttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| |||||| |||||||| |||| |||||| ||||| |||||| |||||||||
Sbjct: 66 aatttttttaaaatttttcataaattttttaaataagacggatagtcaaatgttggacac 7
Query: 169 ggattt 174
||||||
Sbjct: 6 ggattt 1
>RF01062;MIR812;AAAA02013629.1/14001-14173 39946:Oryza sativa Indica
Group
Length = 173
Score = 129 bits (65), Expect = 1e-29
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| | ||| |||| ||| ||||||||||||||| ||||||| |||||
Sbjct: 173 ctattcattttcaaagtttaaccattcgtcttatttgaaatttttttatgattattattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
|||||||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 113 ttattgttattagatgataaaatatgaatagtactttatgtgtgactaatttttttaaaa 54
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
|| ||||| ||||||||||| || || |||||||||||||| ||||||||
Sbjct: 53 ttttttataaatttttcaaataagacagatggtcaaacgttggatacggattt 1
>RF01062;MIR812;AAAA02030356.1/44475-44646 39946:Oryza sativa Indica
Group
Length = 172
Score = 129 bits (65), Expect = 1e-29
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
|||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 169 ttcatatctaacgtttgaccgttcgtcttatttgaaaaaaatt-atgattaatattttta 111
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnn 124
||| |||||||||||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 110 ttgatattagatgataaaacataaatagtactttatgtgtgactatt-ttttaaatattt 52
Query: 125 ttcataaaattttcaaataaaacggacggtcaaa 158
|||||||||||||||||||||||||| |||||||
Sbjct: 51 ttcataaaattttcaaataaaacggatggtcaaa 18
>RF01062;MIR812;FJ032632.1/66474-66642 52545:Oryza alta
Length = 169
Score = 127 bits (64), Expect = 5e-29
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 67
Query: 109 attttttt 116
||||||||
Sbjct: 66 attttttt 59
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 131 aaattttcaaataaaacggacggtcaaac 159
|||||||||||||||||| ||||||||||
Sbjct: 130 aaattttcaaataaaacgaacggtcaaac 158
>RF01062;MIR812;AAAA02000668.1/58953-58791 39946:Oryza sativa Indica
Group
Length = 163
Score = 127 bits (64), Expect = 5e-29
Identities = 105/120 (87%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 119 atgattactatttttattgttattagatgataaaacatgaatagtactttacgtgtgact 60
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| |||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 59 a-cttttaaaaaataattcataaatttttcaaataaaacggacggtcaaacattggacac 1
>RF01062;MIR812;AP002866.1/157116-157289 39947:Oryza sativa Japonica
Group
Length = 174
Score = 127 bits (64), Expect = 5e-29
Identities = 142/172 (82%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| ||||||||||||||||||| |||||| |||||
Sbjct: 174 ctattcatgtccaacgtttgaccgttcgtcttatttgaaaattttttgtgattaatattt 115
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactattt-ttttnnnn 120
|||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Sbjct: 114 ttattgttattagatgataaaacatgaataatactttatgggtgactatttatttttagt 55
Query: 121 nnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
||||||| ||||||||||| || ||||||||||||| |||||||||
Sbjct: 54 ttttttcataagtttttcaaataagacaaacggtcaaacgttagacacggat 3
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttggaca 167
||||||||||||||| ||| ||||||||||||||||||
Sbjct: 130 aaaattttcaaataagacgaacggtcaaacgttggaca 167
>RF01062;MIR812;AACV01016751.1/1577-1419 39947:Oryza sativa Japonica
Group
Length = 159
Score = 127 bits (64), Expect = 5e-29
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||
Sbjct: 124 gattaatatttttattgttattatatgataaaacataaatagtactttatgtgtgactaa 65
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
||||| ||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 64 ctttttttaattttctcataaatttttcaaataagacggacggtcaaacgttggacacgg 5
Query: 171 attt 174
||||
Sbjct: 4 attt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AAAA02020594.1/5764-5601 39946:Oryza sativa Indica
Group
Length = 164
Score = 125 bits (63), Expect = 2e-28
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 16 cgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttattaga 75
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 154 cgtttgaccgttcgtcttatttgaaaaaagattatgattagtatttttattgttattaga 95
Query: 76 tgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaatt 135
||||||||||||||||| |||||||||||||||| |||||| || ||||| ||
Sbjct: 94 tgataaaacatgaatagtactttatgtgtgactaatttttttaatattttttataaattt 35
Query: 136 ttcaaataaaacggacggtcaaa 158
||||||||| ||||| |||||||
Sbjct: 34 ttcaaataagacggatggtcaaa 12
>RF01062;MIR812;AP004989.3/37084-37251 39947:Oryza sativa Japonica
Group
Length = 168
Score = 125 bits (63), Expect = 2e-28
Identities = 106/123 (86%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 123 attactaattttattgttattagatgataaagtatgaatagtactttatgtgtgactaat 64
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgga 171
|| || ||||||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct: 63 ttattaaaaaaaattcataaaatttttaaataagacgaacggtcaaacgttggacacgga 4
Query: 172 ttt 174
|||
Sbjct: 3 ttt 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttattt 37
|||||||||| ||||||||||||||||
Sbjct: 10 tccaacgtttgaccgttcgtcttattt 36
>RF01062;MIR812;AACV01008082.1/25543-25371 39947:Oryza sativa
Japonica Group
Length = 173
Score = 125 bits (63), Expect = 2e-28
Identities = 140/171 (81%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| || ||| ||| ||||||| ||||||||||| || |||| |||||
Sbjct: 173 ctattcatgtctaacctttgaccgttcatcttatttgaatttttttaataattagtattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||
Sbjct: 113 ttattgttattagatgataaaacatgaatagtactttatatgggactaatttttttcaat 54
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
|||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 53 tttttcatatttttttcaaataagacggacggtcaaacgttggacacggat 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AACV01012794.1/451-282 39947:Oryza sativa Japonica
Group
Length = 170
Score = 125 bits (63), Expect = 2e-28
Identities = 107/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 123 atgattagtatttttattgttattaaatgataaaacatgaatagtactttatgtgtgact 64
Query: 109 attt-ttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggaca 167
|||| |||| |||||||| |||| |||||||||| |||||||||||| |||||
Sbjct: 63 atttttttttcaaatttttcataaattttttaaataaaacgaacggtcaaacgtcggaca 4
Query: 168 cgg 170
|||
Sbjct: 3 cgg 1
>RF01062;MIR812;AAAA02000336.1/19048-18877 39946:Oryza sativa Indica
Group
Length = 172
Score = 123 bits (62), Expect = 9e-28
Identities = 100/114 (87%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 60 ttttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnn 119
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 114 ttttattgttagtagatgataaaacatgaataatactttatgtgtgactatttttttaaa 55
Query: 120 nnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggatt 173
|| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 54 tattttt-ataaatttttcaaataaaacggacggtcaaacgttagacacggatt 2
>RF01062;MIR812;AP004592.3/104215-104382 39947:Oryza sativa Japonica
Group
Length = 168
Score = 123 bits (62), Expect = 9e-28
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 121 atgattagtatttttattgttattagatgataaaacataaatagtactttatgtgtgact 62
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaa 158
||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 61 attttttaaaatatttttcataaaattttcaaataagacggatggtcaaa 12
>RF01062;MIR812;AP008213.1/27685317-27685488 39947:Oryza sativa
Japonica Group
Length = 172
Score = 123 bits (62), Expect = 9e-28
Identities = 137/166 (82%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 8 atatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattg 67
||||||||||||| |||||| ||||||||||| ||| |||||| ||||||||
Sbjct: 166 atatccaacgtttgaccgtttatcttatttgaaaattttgtatgtttactacttttattg 107
Query: 68 ttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttc 127
|||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 106 ttattaaatgataaaacatgaatagtactttatgtgtgactatttttttaatttttttt- 48
Query: 128 ataaaattttcaaataaaacggacggtcaaacgttggacacggatt 173
||||| ||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 47 ataaatattttaaataagacggacgatcaaacgttggacacggatt 2
>RF01062;MIR812;AP002094.1/81339-81168 39947:Oryza sativa Japonica
Group
Length = 172
Score = 123 bits (62), Expect = 9e-28
Identities = 145/174 (83%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| || ||||||||||||| || ||||||| |||||
Sbjct: 172 ctattcatctccaacgtttgactgttcgtcttattt-aaaaaaaattatgattattattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 113 ttattgttattagatgataaaacatgaataatactttatgtgtgactaattttttaaatt 54
Query: 122 nnnttcataaaat-tttcaaataaaacggacggtcaaacgttggacacggattt 174
|| ||||| | ||| |||||||||||||||||||||||||||||| |||||
Sbjct: 53 ttttt-ataaattattttaaataaaacggacggtcaaacgttggacacagattt 1
>RF01062;MIR812;AP004087.3/81846-82020 39947:Oryza sativa Japonica
Group
Length = 175
Score = 121 bits (61), Expect = 3e-27
Identities = 104/120 (86%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgacta--ttttt 114
|||||||||| ||||||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 120 tatttttattattattagatgataaaacatgaatagtactttatgtgcgactaacttttt 61
Query: 115 ttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
|| ||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 60 ttttaattttctcataaattttttaaataaaacggacggtcaaacgttggacacggattt 1
>RF01062;MIR812;AAAA02004305.1/15807-15633 39946:Oryza sativa Indica
Group
Length = 175
Score = 121 bits (61), Expect = 3e-27
Identities = 145/176 (82%), Gaps = 4/176 (2%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| | |||||||| |||||||||||||| |||| |||||||||||||
Sbjct: 175 ctattcatcttcaacgtttgaccgttcgtcttatgtgaaatttttttatgattactattt 116
Query: 62 ttattgttattagatgataaaacatgaatagaactttat---gtgtgactatttttttnn 118
| ||||||||||||||||||| |||||||| ||||| | ||||||||||||||||
Sbjct: 115 tatttgttattagatgataaaatatgaatagtacttttttgtgtgtgactatttttttaa 56
Query: 119 nnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
|||||||| ||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 55 aaaaa-ttcataaatttttcaaataagacggacggttaaacgttggacacggattt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttaaccgtccgtcttatttgaa 39
>RF01062;MIR812;AACV01014101.1/103137-103308 39947:Oryza sativa
Japonica Group
Length = 172
Score = 121 bits (61), Expect = 3e-27
Identities = 107/125 (85%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||| ||| ||||||||| ||||||| |||||||
Sbjct: 126 atgattagtatttttattgttattagatgacaaagcatgaatagtactttatatgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| || ||||| ||||||||||| ||||| ||||||| |||||||||
Sbjct: 66 atttttttaatttctttttataaatttttcaaataagacggatggtcaaatgttggacac 7
Query: 169 ggatt 173
|||||
Sbjct: 6 ggatt 2
>RF01062;MIR812;AACV01004847.1/4452-4624 39947:Oryza sativa Japonica
Group
Length = 173
Score = 121 bits (61), Expect = 3e-27
Identities = 141/173 (81%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| ||| ||||| ||||||||| |||||||||||||
Sbjct: 173 ctattcatctccaacgtttgaccattcgttttatttgaaatttttttatgattactattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
|||||| ||||| |||||| ||||| ||||| ||||||||| |||||| ||||||
Sbjct: 113 ttattgctattaaatgatagaacataaatagtactttatgtctgactaattttttttaaa 54
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
||||||| ||||||||||| ||||||||||||||||| |||||| ||||
Sbjct: 53 aaaatcataaagttttcaaataagacggacggtcaaacgttagacacgaattt 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttgga 165
|||| |||||||||||||| | ||||||||||||||
Sbjct: 129 aaaaatttcaaataaaacgaatggtcaaacgttgga 164
>RF01062;MIR812;AAAA02035158.1/27030-27199 39946:Oryza sativa Indica
Group
Length = 170
Score = 119 bits (60), Expect = 1e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 124 atgattactatttttattgttattagatgataaaacatgaatagtactttatgtatgact 65
Query: 109 attttttt 116
||||||||
Sbjct: 64 attttttt 57
>RF01062;MIR812;AACV01007749.1/2820-2990 39947:Oryza sativa Japonica
Group
Length = 171
Score = 119 bits (60), Expect = 1e-26
Identities = 101/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 117 tatttttattgttattagatgataaaacataaatagtactttatgtgtgactatt-tttt 59
Query: 117 nnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
|||||||| ||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 58 aaaaaaaattcataaatttttcaaataagacgaacggtcaaatgttggacacggat 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||| ||| |||||||||||||||||||
Sbjct: 10 tccaacatttgaccgttcgtcttatttgaa 39
>RF01062;MIR812;AAAA02022591.1/24204-24034 39946:Oryza sativa Indica
Group
Length = 171
Score = 119 bits (60), Expect = 1e-26
Identities = 104/120 (86%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgattaatatttttattgtgattagatgataaaacatgaatagaactttatgtgtgact 65
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
||||||| || |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 64 atttttt--aaatatttttataatttttctaaataaaacggacggtcaaacgttggacac 7
>RF01062;MIR812;AP008207.1/7388120-7387948 39947:Oryza sativa
Japonica Group
Length = 173
Score = 119 bits (60), Expect = 1e-26
Identities = 104/120 (86%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 125 atgattactatttttattgttattagatgataaaacataaatagtactttatgtgtgact 66
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|| |||| |||||||| ||||||||||| |||||||||||| | ||||||||
Sbjct: 65 at-ttttaaaaaataattcataaatttttcaaataagacggacggtcaagcattggacac 7
>RF01062;MIR812;AP008207.1/24361891-24362053 39947:Oryza sativa
Japonica Group
Length = 163
Score = 119 bits (60), Expect = 1e-26
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 160 ttcatgtccaacgtttgaccgttcgtcttatttgaaattttttaatgattaatattttta 101
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||| |||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 100 ttgttactagatgataaaacatgaataatactttatatgtgactattttttt 49
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttggaca 167
|||| |||||||||| ||| ||||||||||||||||||
Sbjct: 119 aaaaatttcaaataagacgaacggtcaaacgttggaca 156
>RF01062;MIR812;AACV01010047.1/12882-12711 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 1e-26
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattagtatttttattgctattacatgataaaacatgaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| | ||| ||||||||||||| |||||| ||||||||||||||||||| |||
Sbjct: 66 aaatatttttaaatttttcataaaatttttaaataagacggacggtcaaacgttgggcac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 119 bits (60), Expect = 1e-26
Identities = 140/172 (81%)
Strand = Plus / Plus
Query: 1 actattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatt 60
||||||||| | |||||||| |||||||||||||||| || ||||||| ||||
Sbjct: 36 actattcatgttcaacgtttgaccgttcgtcttatttaaaaaatttttatgattagtatt 95
Query: 61 tttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnn 120
|||||| ||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct: 96 tttattactattagatgataaaacatgaataatactttatgtgtgactaaatattttcaa 155
Query: 121 nnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
|||| ||| ||||||||||| ||||||||| |||||||||||||||||
Sbjct: 156 atttttcacaaatttttcaaataagacggacggttaaacgttggacacggat 207
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 200 tccaacgtttaaccgtccgtcttatttgaa 171
>RF01062;MIR812;AACV01019813.1/5059-4888 39947:Oryza sativa Japonica
Group
Length = 172
Score = 117 bits (59), Expect = 5e-26
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| |||||||||||||||||||||||||||||||||||| |||||| ||| |||||
Sbjct: 124 gattaatatttttattgttattagatgataaaacatgaatagtactttacgtgcgactaa 65
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
||||| ||||||| |||||||||||||||||| ||||||||||| ||||||
Sbjct: 64 cttttttaaattttctcataaatttttcaaataaaacggacagtcaaacgttgaacacgg 5
Query: 171 att 173
|||
Sbjct: 4 att 2
>RF01062;MIR812;AAAA02018832.1/20699-20526 39946:Oryza sativa Indica
Group
Length = 174
Score = 117 bits (59), Expect = 5e-26
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 127 atgattactatttttattgttattagatgataaaacataaatagtactttatgtgtcact 68
Query: 109 atttttttnnnnnnnntt-cataaaattttcaaataaaacggacggtcaaacgttggaca 167
| ||||| || |||||| |||| |||||| ||||||||||||||||| ||||
Sbjct: 67 aactttttaaaaaaaattgcataaattttttaaataagacggacggtcaaacgttagaca 8
Query: 168 cggattt 174
|||||||
Sbjct: 7 cggattt 1
>RF01062;MIR812;AAAA02030037.1/1370-1196 39946:Oryza sativa Indica
Group
Length = 175
Score = 117 bits (59), Expect = 5e-26
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| || ||||||| || |||||||||||||||| ||||||| |||||
Sbjct: 175 ctattcatctctaacgtttgactgttcgtcttatttgaaaattttttatgattattattt 116
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 115 ttattgttattagatgataaaacatgaataatactttatgtgtgactaatttttt 61
>RF01062;MIR812;AC093088.4/1764-1591 39947:Oryza sativa Japonica
Group
Length = 174
Score = 117 bits (59), Expect = 5e-26
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
||||| || ||||| |||| ||||||||||||||||||| ||||||| |||||
Sbjct: 174 ctatttatgtccaatgtttgaccgttcgtcttatttgaaaaaagattatgattagtattt 115
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 114 ttattgttattagatgataaaacataaatagtactttatgtgtgactaatttttt 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| ||| |||||||||| |||||||
Sbjct: 134 ttttcaaataagacgaacggtcaaacattggaca 167
>RF01062;MIR812;AACV01022388.1/14766-14591 39947:Oryza sativa
Japonica Group
Length = 176
Score = 117 bits (59), Expect = 5e-26
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| || ||||||| | || |||||||||||||| |||||||||| ||
Sbjct: 176 ctattcatgtctaacgtttgatcggtcgtcttatttgaatattttttatgattactactt 117
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 116 ttattgttattagatgataaaacatgaatagtactttatgtgtgactaatttttt 62
>RF01062;MIR812;AACV01016077.1/12148-12316 39947:Oryza sativa
Japonica Group
Length = 169
Score = 117 bits (59), Expect = 5e-26
Identities = 133/163 (81%)
Strand = Plus / Minus
Query: 12 ccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttat 71
||||||||| | |||||||||||||| || |||||||||||||||||||||||
Sbjct: 163 ccaacgtttgatcgttcgtcttatttaaaaaaaaattatgattactatttttattgttat 104
Query: 72 tagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataa 131
||||||||||||||| || || ||||||||| ||||||||||||| |||||||
Sbjct: 103 tagatgataaaacataaaaagtactttatgtatgactattttttttaaattttttcataa 44
Query: 132 aattttcaaataaaacggacggtcaaacgttggacacggattt 174
| |||| |||||| |||||| || ||| ||||||||||||||
Sbjct: 43 attttttaaataagacggacagtaaaatattggacacggattt 1
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 117 bits (59), Expect = 5e-26
Identities = 133/163 (81%)
Strand = Plus / Minus
Query: 1 actattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatt 60
|||||||| || |||||||| ||||| |||||||||| || ||||||| ||||
Sbjct: 210 actattcacattcaacgtttgaccgtccgtcttatttaaaaattttttatgattagtatt 151
Query: 61 tttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnn 120
||||||| |||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct: 150 tttattgctattagatgataaaacatgaatagtactttatgtgtgactaaatgtttttaa 91
Query: 121 nnnnttcataaaattttcaaataaaacggacggtcaaacgttg 163
|||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 90 ttttttcacaaatttttcaaataagacggacggtcaaacgttg 48
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
|||||||| |||||| ||||||||||||||||||
Sbjct: 165 aaaatttttaaataagacggacggtcaaacgttg 198
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa Indica
Group
Length = 244
Score = 117 bits (59), Expect = 5e-26
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 85 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 144
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttg 163
| | ||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 145 aaatatttttaattttttcataaatttttcaaataagacggacggtcaaacgttg 199
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 130 aaaattttcaaataaaacggacggtcaaacgtt 162
|||| |||||||||| |||||||||||||||||
Sbjct: 81 aaaaatttcaaataagacggacggtcaaacgtt 49
>RF01062;MIR812;AC225897.2/52668-52836 63629:Oryza minuta
Length = 169
Score = 115 bits (58), Expect = 2e-25
Identities = 103/119 (86%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 124 atgattaatatttttattgttattagatgataaaatatgaatagaactttatgtgtaact 65
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggaca 167
|||||||| || |||||||||| |||||| | ||| ||||||||||||||||
Sbjct: 64 attttttt--agtttttttataaaatttttaaataagatggatggtcaaacgttggaca 8
>RF01062;MIR812;AAAA02027210.1/812-640 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 2e-25
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 162 caacgtttaaccgttcgtcttatttgaattttttttatgattagtatttttattgctatt 103
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
|||||||||||||||||||| |||||||||| ||||| | ||| |||| |||
Sbjct: 102 agatgataaaacatgaatagtactttatgtgcgactaaatatttttatttttttcacaaa 43
Query: 133 attttcaaataaaacggacggtcaaacgttggac 166
||||||||||| | |||||||||||||||||||
Sbjct: 42 tttttcaaataagatggacggtcaaacgttggac 9
>RF01062;MIR812;AAAA02003721.1/15438-15265 39946:Oryza sativa Indica
Group
Length = 174
Score = 115 bits (58), Expect = 2e-25
Identities = 107/126 (84%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 126 atgattattatttttattattattagatgataaaacataaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| |||||| ||||||||||||| |||||||| ||| |||||||| ||| ||||
Sbjct: 66 aattttttaaaaaattttcataaaatttttaaataaaatggatggtcaaacattgaacac 7
Query: 169 ggattt 174
|||||
Sbjct: 6 agattt 1
>RF01062;MIR812;ABRL01001420.1/1095-922 65489:Oryza barthii
Length = 174
Score = 115 bits (58), Expect = 2e-25
Identities = 142/174 (81%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnna-tgattactatt 60
|||||||| |||||||||| ||||||||| ||||||||| | |||||||||||
Sbjct: 174 ctattcatctccaacgtttaaccgttcgttttatttgaaaaaaaaataatgattactatt 115
Query: 61 tttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnn 120
||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 114 tttattgctattagatgataaaatatgaatagtactttatgtgtgactaatttttttaaa 55
Query: 121 nnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
| |||||||||| |||||| | |||| ||||||||||| ||||| ||||
Sbjct: 54 aaaaattataaaatttttaaataagatggacagtcaaacgttgaacacgaattt 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttgga 165
||||||||||||||| ||||| ||||||||||
Sbjct: 134 ttttcaaataaaacgaacggttaaacgttgga 165
>RF01062;MIR812;AACV01007841.1/2621-2455 39947:Oryza sativa Japonica
Group
Length = 167
Score = 115 bits (58), Expect = 2e-25
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 124 atgattaatatttttattgttattaaatgataaaacataaatagtactttatgtgtgact 65
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgtt 162
| |||||| || ||||| |||| ||||||||||||||||||||||||
Sbjct: 64 aattttttaaatctttttaataaattttttaaataaaacggacggtcaaacgtt 11
>RF01062;MIR812;AP008208.1/14869928-14869757 39947:Oryza sativa
Japonica Group
Length = 172
Score = 113 bits (57), Expect = 8e-25
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 169 ttcatgtccaacgtttgaccgttcgtcttatttgaaaattttttatgattagtattttta 110
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgacta 109
||||||||||||||||||| |||||||| | ||||||||||||||
Sbjct: 109 ttgttattagatgataaaatatgaatagtattttatgtgtgacta 65
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttggaca 167
||||||||||||||| ||| ||||||||||||||||||
Sbjct: 128 aaaattttcaaataagacgaacggtcaaacgttggaca 165
>RF01062;MIR812;AC123527.3/68856-69028 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 8e-25
Identities = 121/146 (82%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 162 caacgtttgaccgttcgtcttatttgaaaaaaatt-atgattagtatttttattgttatt 104
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
| ||| |||||||| ||||| |||||||||||||||| |||||| ||||||||
Sbjct: 103 atatggtaaaacattaatagtactttatgtgtgactaatttttttaacttttttcataaa 44
Query: 133 attttcaaataaaacggacggtcaaa 158
||||||||||| |||||||||||||
Sbjct: 43 tttttcaaataagacggacggtcaaa 18
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttg 163
||||||||||| ||| ||||||||||||||
Sbjct: 133 ttttcaaataagacgaacggtcaaacgttg 162
>RF01062;MIR812;AP008213.1/17875116-17874944 39947:Oryza sativa
Japonica Group
Length = 173
Score = 113 bits (57), Expect = 8e-25
Identities = 137/169 (81%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| || ||||||| ||||||||||||||||||| | |||| ||||||||
Sbjct: 170 ttcatgtctaacgtttgaccgttcgtcttatttgaaaactttttacaattaatattttta 111
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnn 124
|||||||||| ||||||||||||||| | |||||||||| ||||| |||||
Sbjct: 110 ttgttattaggtgataaaacatgaattgtactttatgtgcgactaactttttttaatttt 51
Query: 125 ttcataaaattttcaaataaaacggacggtcaaacgttggacacggatt 173
||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 50 ctcataaaattttcaaataagacggacaatcaaacgttggacacggatt 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| ||| ||||||||||||| ||||
Sbjct: 133 ttttcaaataagacgaacggtcaaacgttagaca 166
>RF01062;MIR812;AACV01013879.1/16944-17114 39947:Oryza sativa
Japonica Group
Length = 171
Score = 113 bits (57), Expect = 8e-25
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||
Sbjct: 122 attaatatttttattgttattaaatg-taaaagatgaatagtgctttatgtgtgactatt 64
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgga 171
||||| || ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 63 tttttaatttttttttataaatttttcaaataagacggacggtcaaacgttggacacgga 4
Query: 172 t 172
|
Sbjct: 3 t 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AP008208.1/34975479-34975627 39947:Oryza sativa
Japonica Group
Length = 149
Score = 113 bits (57), Expect = 8e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 99 attactatttttattgttattagatgataaaatatgaatagtactttatgtgtgactatt 40
Query: 112 ttttt 116
|||||
Sbjct: 39 ttttt 35
>RF01062;MIR812;AACV01002976.1/6404-6578 39947:Oryza sativa Japonica
Group
Length = 175
Score = 113 bits (57), Expect = 8e-25
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||||| |||||||| |||||||||||||||| || ||||||| ||||||||
Sbjct: 172 ttcatattcaacgtttgaccgttcgtcttatttaaaaaaatattatgattaatattttta 113
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgacta 109
||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 112 ttgttattagatgataaaatatgaatagtactttatgtgtgacta 68
>RF01062;MIR812;AP004702.3/6516-6676 39947:Oryza sativa Japonica
Group
Length = 161
Score = 113 bits (57), Expect = 8e-25
Identities = 140/171 (81%), Gaps = 12/171 (7%)
Strand = Plus / Minus
Query: 3 tattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttt 62
|||| ||||| ||||||| ||||||| |||||||| || ||||||| || |||
Sbjct: 160 tatttatatctaacgtttgaccgttcatcttatttaaaatgtttttatgattagtacttt 101
Query: 63 tattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnn 122
|||||||||||||||||||||||||||||| ||||| ||||||||| ||||||
Sbjct: 100 tattgttattagatgataaaacatgaatagtacttt--gtgtgactaatttttt------ 49
Query: 123 nnttcataaaattttcaaataaaacggacggtcaaacgttggacacggatt 173
|||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 48 ----cataaatttttcaaataaaacggacggtcaaacgttggatacggatt 2
>RF01062;MIR812;AP003443.4/111578-111408 39947:Oryza sativa Japonica
Group
Length = 171
Score = 113 bits (57), Expect = 8e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 123 atgattagtatttttattgttattagatgataaaacatgaatagcactttatgtgtgact 64
Query: 109 atttt 113
|||||
Sbjct: 63 atttt 59
>RF01062;MIR812;AC137070.2/86863-86692 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 8e-25
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 122 attaatatttttattgttattagatgataaaacatgaataatactttatgtgtgactatt 63
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgga 171
|||| || |||| |||| |||||| ||||||||||||||||||||||||||
Sbjct: 62 -ttttaaaaaaaattgttaaattttttaaataagacggacggtcaaacgttggacacgga 4
Query: 172 t 172
|
Sbjct: 3 t 3
>RF01062;MIR812;AACV01002319.1/11897-11727 39947:Oryza sativa
Japonica Group
Length = 171
Score = 113 bits (57), Expect = 8e-25
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct: 118 tattttaattgttattagatgataaaacataaatagtactttacgtgtgactattttttt 59
Query: 117 nnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacg 169
| |||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 58 ttatgttttccataaatttttcaaacaaaacggacggtcaaacgttagacacg 6
>RF01062;MIR812;ABRL01001295.1/1685-1858 65489:Oryza barthii
Length = 174
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 127 atgattaatatttttattgttattagatgataaaacatgaatagtactttgtgtgtgact 68
Query: 109 attttttt 116
||||||||
Sbjct: 67 attttttt 60
>RF01062;MIR812;AP008215.1/10128587-10128414 39947:Oryza sativa
Japonica Group
Length = 174
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 126 atgattactatttttattgttattagatgataaaacatgaatagtattttatgtgtgact 67
Query: 109 attttttt 116
| ||||||
Sbjct: 66 aatttttt 59
>RF01062;MIR812;AACV01015495.1/1482-1650 39947:Oryza sativa Japonica
Group
Length = 169
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 124 atgattagtatttttattgttattggatgataaaacatgaatagtactttatgtgtgact 65
Query: 109 attttttt 116
||||||||
Sbjct: 64 attttttt 57
>RF01062;MIR812;AP008218.1/8955365-8955194 39947:Oryza sativa
Japonica Group
Length = 172
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 127 atgattaatatttttattgttattagatgataaaacatgaatagtactttacgtgtgact 68
Query: 109 attttttt 116
||||||||
Sbjct: 67 attttttt 60
>RF01062;MIR812;AAAA02017762.1/94416-94244 39946:Oryza sativa Indica
Group
Length = 173
Score = 111 bits (56), Expect = 3e-24
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 162 caacgtttgaccgttcgtcttatttgaaaaaagattatgattagtatttttattgttatt 103
Query: 73 agatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||| | |||||||||||||| ||||||
Sbjct: 102 agatgataaaacatgaatactattttatgtgtgactaatttttt 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttg 163
||||||||||| ||| ||||||||||||||
Sbjct: 133 ttttcaaataagacgaacggtcaaacgttg 162
>RF01062;MIR812;AACV01013958.1/11174-11347 39947:Oryza sativa
Japonica Group
Length = 174
Score = 111 bits (56), Expect = 3e-24
Identities = 140/172 (81%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| ||||||||||||||| | | ||||| |||||
Sbjct: 174 ctattcatgtccaacgtttgtccgttcgtcttatttagaaaaagattacgattagtattt 115
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
|||||||||||| |||||||||||||||||| | |||||||||||||||||||||
Sbjct: 114 ttattgttattaaatgataaaacatgaatagtattttatgtgtgactattttttttaata 55
Query: 122 nnnttcataaaattttcaaataaaacggacggtc-aaacgttggacacggat 172
|||||||| ||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 54 tttttcataaatttttcaaataagatggatggtcaaaacgttgaacacggat 3
>RF01062;MIR812;AP005192.3/94290-94133 39947:Oryza sativa Japonica
Group
Length = 158
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 116 atgattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgact 57
Query: 109 attttttt 116
||||||||
Sbjct: 56 attttttt 49
>RF01062;MIR812;AP004646.3/3196-3367 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 67
Query: 109 attttttt 116
| ||||||
Sbjct: 66 aatttttt 59
>RF01062;MIR812;AACV01012113.1/19788-19615 39947:Oryza sativa
Japonica Group
Length = 174
Score = 111 bits (56), Expect = 3e-24
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
||||| |||||||| ||| ||||||||||||||||||| ||||||| |||||
Sbjct: 174 ctatttatatccaatatttgaccgttcgtcttatttgaaaaaagattatgattagtattt 115
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgacta 109
||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 114 ttattgttattagatgataaaacatgaatagtactttatatgtgacta 67
>RF01062;MIR812;AP008209.1/6599969-6599799 39947:Oryza sativa
Japonica Group
Length = 171
Score = 111 bits (56), Expect = 3e-24
Identities = 142/173 (82%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
||||| || |||||||||| ||||||||||||||||||| || ||||||||||
Sbjct: 171 ctatttatctccaacgtttgaccgttcgtcttatttgaattttttt-ataattactattt 113
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
|||||||||||||||||||||||||| ||| |||||||||| | ||| ||||||
Sbjct: 112 ttattgttattagatgataaaacatgtataatactttatgtg-ggctaatttttttaaag 54
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
||||||| |||| |||||| |||||||||||||||||||||||| ||||
Sbjct: 53 aaaatcataaattttttaaataagacggacggtcaaacgttggacacgaattt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 136 ttcaaataaaacggacggtcaaacgttgga 165
||||||||| ||| ||||||||||||||||
Sbjct: 133 ttcaaataagacgaacggtcaaacgttgga 162
>RF01062;MIR812;AAAA02022475.1/22256-22085 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 3e-24
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaacatgaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| | ||| |||| ||| ||||||||||| |||||||||||||||||| |||
Sbjct: 66 aaatgttttcaaatttttcacaaatttttcaaataagacggacggtcaaacgttgagcac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
>RF01062;MIR812;AACV01001852.1/15957-15785 39947:Oryza sativa
Japonica Group
Length = 173
Score = 111 bits (56), Expect = 3e-24
Identities = 106/124 (85%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||||||
Sbjct: 125 atgattagtatttttattgttattagatgatagaacctgaatagtactttacgtgtgact 66
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||| |||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 65 -ttttttaataaaaaattcataaatttttcaaataagacggacggtcaaacgttggatac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 9 tatccaacgtttcaccgttcgtcttatttgaa 40
|||||||||||| ||||| |||||||||||||
Sbjct: 8 tatccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AAAA02003990.1/25355-25184 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 3e-24
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| || ||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 169 ttcatgtctaacgtttgaccgttcgtcttatttgaaaaaaaat-atgattagtattttta 111
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnn 124
||||||||| |||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 110 ttgttattacatgataaaacatgaatagtactttatgtgtgattattttttt-taatttt 52
Query: 125 ttcataaaattttcaaataaaacggacggtcaaa 158
||||||| ||||||||||| |||||||||||||
Sbjct: 51 ttcataattttttcaaataagacggacggtcaaa 18
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| ||| ||||||||||||| ||||
Sbjct: 132 ttttcaaataagacgaacggtcaaacgttagaca 165
>RF01062;MIR812;AL731642.3/95924-95755 39947:Oryza sativa Japonica
Group
Length = 170
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 126 atgattactatttttgttgttattagatgataaaacatggatagtactttatgtgtgact 67
Query: 109 attttttt 116
||||||||
Sbjct: 66 attttttt 59
>RF01062;MIR812;AAAA02016179.1/4117-4272 39946:Oryza sativa Indica
Group
Length = 156
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 111 atgattagtatttttattgttattagatgataaaacatgaatattactttatgtgtgact 52
Query: 109 attttttt 116
||||||||
Sbjct: 51 attttttt 44
>RF01062;MIR812;DQ280674.1/7188-7361 4529:Oryza rufipogon
Length = 174
Score = 111 bits (56), Expect = 3e-24
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 163 caacgtttgaccgttcgtcttatttgaaaaaagattatgtttattatttttattgttatt 104
Query: 73 agatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 103 agatgataaaacatgaatattactttatgtgtgactaatttttt 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttg 163
||||||||||| ||| ||||||||||||||
Sbjct: 134 ttttcaaataagacgaacggtcaaacgttg 163
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 111 bits (56), Expect = 3e-24
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||| ||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaatttttttatgattagtatttttattgctatt 107
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
||||||||||||||||||| |||||||||||||||| | ||| ||||||||
Sbjct: 108 agatgataaaacatgaataatactttatgtgtgactaaatatttttaattttttcataaa 167
Query: 133 attttcaaataaaacggacggtcaaacgttgg 164
| ||||||||| |||||||||||||||||||
Sbjct: 168 ttcttcaaataagacggacggtcaaacgttgg 199
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
|||| |||||||||| ||||||||||||||||||
Sbjct: 81 aaaaatttcaaataagacggacggtcaaacgttg 48
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 111 bits (56), Expect = 3e-24
Identities = 121/148 (81%)
Strand = Plus / Plus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||| ||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaaattttttatgattagtatttttattgctatt 107
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
|||||||||||||||||||| |||||||||||||||| | ||| |||| |||
Sbjct: 108 agatgataaaacatgaatagtactttatgtgtgactaaatgtttttaattttttcacaaa 167
Query: 133 attttcaaataaaacggacggtcaaacg 160
||||||||||| |||||||||||||||
Sbjct: 168 tttttcaaataagacggacggtcaaacg 195
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||||||
Sbjct: 81 aaaattttcaaataagacggacggtcaaacgttg 48
>RF01062;MIR812;AAAA02023282.1/1611-1439 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 1e-23
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||| ||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 161 caacgtttaaccgtccgtcttatttgaaaattttttatgattagtatttttattgctatt 102
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
|||||||||||||| ||||| |||||||||||||||| | ||| |||| |||
Sbjct: 101 agatgataaaacataaatagtactttatgtgtgactaaatgtttttaactttttcacaaa 42
Query: 133 attttcaaataaaacggacggtcaaacgttg 163
||||||||||| ||||||||||||||||||
Sbjct: 41 tttttcaaataagacggacggtcaaacgttg 11
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||| ||||||||
Sbjct: 128 aaaattttcaaataagacggacggttaaacgttg 161
>RF01062;MIR812;AP008214.1/5428439-5428610 39947:Oryza sativa
Japonica Group
Length = 172
Score = 109 bits (55), Expect = 1e-23
Identities = 106/124 (85%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||| |||||||||||||||||||||| | |||||||||||||
Sbjct: 125 atgattagtatttttattgtgtttagatgataaaacatgaatagtagtttatgtgtgact 66
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| |||||||| |||| |||||| || ||||||||||||||| ||||
Sbjct: 65 attttttt-taattttttcataaactttttaaataagacagacggtcaaacgttgaacac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaac 159
||||||||||||||||||||| ||||
Sbjct: 132 ttttcaaataaaacggacggttaaac 157
>RF01062;MIR812;AP008215.1/17930701-17930860 39947:Oryza sativa
Japonica Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 50 tgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgacta 109
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 114 tgattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgacta 55
Query: 110 ttttttt 116
|||||||
Sbjct: 54 ttttttt 48
>RF01062;MIR812;AACV01002199.1/17294-17469 39947:Oryza sativa
Japonica Group
Length = 176
Score = 109 bits (55), Expect = 1e-23
Identities = 121/147 (82%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 165 caacgtttgaccgttcgtctgatttgaaaaaggattatgattagtatttttattgttatt 106
Query: 73 agatgataaaacatgaatagaactttatgtgtgacta-tttttttnnnnnnnnttcataa 131
|||||||||||| || |||| |||||||||||||||| ||||||| |||||||
Sbjct: 105 agatgataaaacctggatagtactttatgtgtgactagttttttttaatatttttcataa 46
Query: 132 aattttcaaataaaacggacggtcaaa 158
| ||||||||||| ||||| |||||||
Sbjct: 45 atttttcaaataagacggatggtcaaa 19
>RF01062;MIR812;CR855091.1/2371-2544 4530:Oryza sativa (rice)
Length = 174
Score = 109 bits (55), Expect = 1e-23
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| |||||||||| |||||| |||||||||||| ||||||| ||||||||
Sbjct: 171 ttcatgtccaacgtttgaccgtttgtcttatttgaaaaaaaattatgattaatattttta 112
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttt 115
|||||||||||| ||||||||| ||||| |||||||||||||||| |||||
Sbjct: 111 ttgttattagataataaaacatcaatagcactttatgtgtgactaattttt 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| || ||||||||||||||||||
Sbjct: 134 ttttcaaataagacaaacggtcaaacgttggaca 167
>RF01062;MIR812;AC114983.6/110451-110622 39947:Oryza sativa Japonica
Group
Length = 172
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 125 atgattactatttttattgttgttagatgataaaacatgaatagtactttatgtgtgact 66
Query: 109 atttttt 115
| |||||
Sbjct: 65 aattttt 59
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||||||||| |||||||||||||||
Sbjct: 132 ttttcaaataaaacggatagtcaaacgttggaca 165
>RF01062;MIR812;AC051633.7/116553-116379 4530:Oryza sativa (rice)
Length = 175
Score = 109 bits (55), Expect = 1e-23
Identities = 86/99 (86%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| ||||||||||||||||||| ||||||| |||||||||| |||
Sbjct: 166 tccaacgtttgaccgttcgtcttatttgaaattcttttatgattagtatttttattatta 107
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgacta 109
|||||||||||||||||||||| |||||||||| |||||
Sbjct: 106 ttagatgataaaacatgaatagtactttatgtgcgacta 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 135 tttcaaataaaacggacggtcaaacgttggac 166
|||||||||| ||| |||||||||||||||||
Sbjct: 136 tttcaaataagacgaacggtcaaacgttggac 167
>RF01058;MIR806;AP003616.4/59947-60190 39947:Oryza sativa Japonica
Group
Length = 244
Score = 109 bits (55), Expect = 1e-23
Identities = 124/151 (82%), Gaps = 1/151 (0%)
Strand = Plus / Plus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||| ||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaaattttttatgattagtatttttattgctatt 107
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
|||||||||||||||||||| |||||||||||||||| | ||| || |||||
Sbjct: 108 agatgataaaacatgaatagtactttatgtgtgactaaatgtttttaatttttt-ataaa 166
Query: 133 attttcaaataaaacggacggtcaaacgttg 163
||||||||||| ||||||||||||||||||
Sbjct: 167 tttttcaaataagacggacggtcaaacgttg 197
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||||||
Sbjct: 81 aaaattttcaaataagacggacggtcaaacgttg 48
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 109 bits (55), Expect = 1e-23
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||| |||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct: 92 tatttttattgctattagatgataaaacatgaatagtactttatgtgtgactaaatgttt 151
Query: 117 nnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttg 163
|||||||| ||||||||||| ||||||||||||||||||
Sbjct: 152 ttaattttttcataaatttttcaaataagacggacggtcaaacgttg 198
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||||||
Sbjct: 81 aaaattttcaaataagacggacggtcaaacgttg 48
>RF01062;MIR812;AP008218.1/17342529-17342702 39947:Oryza sativa
Japonica Group
Length = 174
Score = 107 bits (54), Expect = 5e-23
Identities = 104/122 (85%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |
Sbjct: 124 attagtatttttattgttattagatgataatacatgaatagtactttgtgtgtgactagt 65
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtc-aaacgttggacacgg 170
|||| |||||||||||| ||||||| |||||||||| ||||| |||||||||
Sbjct: 64 attttttatttttttcataaaatttacaaataagacggacggtcaaaacgctggacacgg 5
Query: 171 at 172
||
Sbjct: 4 at 3
>RF01062;MIR812;AACV01010653.1/22675-22848 39947:Oryza sativa
Japonica Group
Length = 174
Score = 107 bits (54), Expect = 5e-23
Identities = 141/174 (81%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| ||||||| | |||||| || || ||||||||||
Sbjct: 174 ctattcatctccaacgtttaaccgttcattttatttaaaatttttttataattactattt 115
Query: 62 ttattgttattagatgataaaacatgaatagaac-tttatgtgtgactatttttttnnnn 120
||||||||||||||||||||||||| ||||| || |||| ||||| ||| |||||
Sbjct: 114 ttattgttattagatgataaaacataaatagtacttttaagtgtggctaaattttttaaa 55
Query: 121 nnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
||||||| ||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 54 aaaaatcataaatttttcaaataaaacggacggttaaacgttggatacggattt 1
>RF01062;MIR812;AP003381.3/104588-104420 39947:Oryza sativa Japonica
Group
Length = 169
Score = 107 bits (54), Expect = 5e-23
Identities = 108/126 (85%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||
Sbjct: 124 atgattactatttttattgttattagatgataaaacatgaata-attttcaggtgtgact 66
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| || ||||||||||||||||| ||||| |||||| |||||||||
Sbjct: 65 attttttttatttttttt-ataaaattttcaaataagacggattgtcaaatgttggacac 7
Query: 169 ggattt 174
||||||
Sbjct: 6 ggattt 1
>RF01062;MIR812;AP008209.1/687985-688157 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 5e-23
Identities = 137/170 (80%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
|||||||| || |||| ||| ||||||||||||||| | ||||| ||||||||
Sbjct: 170 ttcatatctaatgtttgaccattcgtcttatttgaaatttttttacgattaatattttta 111
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnn 124
|||||| ||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 110 ttgttactagatgataaaacatgaatagtactttatgtgtgactaactttttttaatttt 51
Query: 125 ttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
||||||| ||||||||||| ||||||||| ||| |||| |||| |||||
Sbjct: 50 ctcataaatttttcaaataagacggacggttaaatgttgaacacagattt 1
>RF01062;MIR812;AAAA02005541.1/24465-24293 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 5e-23
Identities = 131/162 (80%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| | |||||||| ||||| ||||||||||||| ||| ||| |||||
Sbjct: 173 ctattcatgttcaacgtttgaccgtccgtcttatttgaaaattttttatggttattattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
||||| |||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct: 113 ttattactattagatgataaaacatgaatagtactttatgtgtgactaaatgtttttaat 54
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgttg 163
|||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 53 tttttcataaatttttcaaataagacggacggttaaacgttg 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||||||
Sbjct: 129 aaaattttcaaataagacggacggtcaaacgttg 162
>RF01062;MIR812;AACV01001613.1/49598-49424 39947:Oryza sativa
Japonica Group
Length = 175
Score = 105 bits (53), Expect = 2e-22
Identities = 106/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| ||||
Sbjct: 127 atgattaatatttttattgttattagatgataaaatatgaatagtattttatgtgcgact 68
Query: 109 -atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggaca 167
||| |||| || ||||| ||||||||||||||||||| |||||||| |||||
Sbjct: 67 aattgtttttaattttttttataaatttttcaaataaaacggacgatcaaacgtaggaca 8
Query: 168 cggat 172
|||||
Sbjct: 7 cggat 3
>RF01062;MIR812;AP008218.1/22147224-22147394 39947:Oryza sativa
Japonica Group
Length = 171
Score = 105 bits (53), Expect = 2e-22
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 8 atatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattg 67
||||||||||||| ||| || |||||||||||| |||||| |||||||||||
Sbjct: 165 atatccaacgtttgaccatttgtcttatttgaaaatttcttgtgattagtatttttattg 106
Query: 68 ttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||| | ||| |||||||||||||||||||||||
Sbjct: 105 ttattagatgataaaacataattagtactttatgtgtgactattttttt 57
>RF01062;MIR812;AACV01018282.1/13676-13506 39947:Oryza sativa
Japonica Group
Length = 171
Score = 105 bits (53), Expect = 2e-22
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 59 tttttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnn 118
||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 114 tttttattgttattaaatgataaaacatgaataacactttatgtgtgactattttttt-- 57
Query: 119 nnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
|| ||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct: 56 taatcttttataaatttttcaaataagacggacaatcaaacgttggacacggat 3
>RF01062;MIR812;AP008212.1/25684116-25683949 39947:Oryza sativa
Japonica Group
Length = 168
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 119 gattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgactat 60
Query: 111 ttttt 115
|||||
Sbjct: 59 ttttt 55
>RF01062;MIR812;AAAA02000365.1/28299-28472 39946:Oryza sativa Indica
Group
Length = 174
Score = 105 bits (53), Expect = 2e-22
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 124 gattagtatttttgttgttattagatgataaaacatgaatagtactttatgtgtgactta 65
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
||||| |||||||| |||||||||| ||||| |||||||| ||||||||||
Sbjct: 64 atttttaaaattgtttcataaatctttcaaataagacggatggtcaaacattggacacgg 5
Query: 171 a 171
|
Sbjct: 4 a 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgtt 162
||||||||||||||| |||||||||||||||||
Sbjct: 130 aaaattttcaaataagacggacggtcaaacgtt 162
>RF01062;MIR812;AACV01006398.1/10019-9855 39947:Oryza sativa
Japonica Group
Length = 165
Score = 105 bits (53), Expect = 2e-22
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 152 caacgtttgaccgttcgtcttatttgaaatttttttatgattagtatttttattgctatt 93
Query: 73 agatgataaaacatgaatagaactttatgtgtgacta 109
|||||||||||||| ||||| ||||||||||||||||
Sbjct: 92 agatgataaaacattaatagtactttatgtgtgacta 56
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
|||| |||||||||| ||| ||||||||||||||
Sbjct: 119 aaaaatttcaaataagacgaacggtcaaacgttg 152
>RF01062;MIR812;AP005896.3/16520-16691 39947:Oryza sativa Japonica
Group
Length = 172
Score = 105 bits (53), Expect = 2e-22
Identities = 135/163 (82%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| | ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 163 tccaacgtttgatcgttcgtcttatttgaaaaaaaat-atgattagtatttttattgtta 105
Query: 71 ttagatgataaaacatgaatagaacttt-atgtgtgactatttttttnnnnnnnnttcat 129
|| |||||||||||||||||| |||| | |||| | || |||||| |||||
Sbjct: 104 ataaatgataaaacatgaatagtccttttaagtgtaattaattttttaaaaaaa-ttcat 46
Query: 130 aaaattttcaaataaaacggacggtcaaacgttggacacggat 172
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 aaaattttcaaataaaacggacggtcaaacgttggacacggat 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggacac 168
||||||||||| ||| ||| |||||||||||||||
Sbjct: 132 ttttcaaataagacgaacgatcaaacgttggacac 166
>RF01062;MIR812;AC096856.7/14838-15012 39947:Oryza sativa Japonica
Group
Length = 175
Score = 105 bits (53), Expect = 2e-22
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| | ||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 164 caacgtttaatcgttcgtcttatttgaaaaacaattatgattagtatttttattgttatt 105
Query: 73 agatgataaaacatgaatagaactttatgtgtgacta 109
||||||||| |||||||||| ||||||||||||||||
Sbjct: 104 agatgataatacatgaatagtactttatgtgtgacta 68
>RF01062;MIR812;AP008213.1/24151079-24150909 39947:Oryza sativa
Japonica Group
Length = 171
Score = 105 bits (53), Expect = 2e-22
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||
Sbjct: 126 atgattactatttttattgctattagatgataaaacgtgaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| | ||| |||||||| |||| |||||| ||||||| ||||||||||| |||
Sbjct: 66 aaatattttcaaaattttcataaattttttaaataagacggacgatcaaacgttgggcac 7
Query: 169 g 169
|
Sbjct: 6 g 6
>RF01062;MIR812;AACV01011182.1/7873-7689 39947:Oryza sativa Japonica
Group
Length = 185
Score = 105 bits (53), Expect = 2e-22
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||| ||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 160 caacgtttgaccgtccgtcttatttgaaaattttttatgattagtatttttattgctatt 101
Query: 73 agatgataaaacatgaatagaactttatgtgtgacta 109
|||||||||||||||||||| ||||||||||||||||
Sbjct: 100 agatgataaaacatgaatagtactttatgtgtgacta 64
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||||||
Sbjct: 127 aaaattttcaaataagacggacggtcaaacgttg 160
>RF01062;MIR812;AAAA02020865.1/43524-43353 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 122 attaatatttttattgttattagatgataaaacatgaatagtaatttatgtgtgactatt 63
Query: 112 tttt 115
||||
Sbjct: 62 tttt 59
>RF01062;MIR812;ABRL01002334.1/1767-1595 65489:Oryza barthii
Length = 173
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 126 atgattactacttttattgttattagatgataaaatatgaatagtactttatgtgtgact 67
Query: 109 attttttt 116
| ||||||
Sbjct: 66 aatttttt 59
>RF01062;MIR812;AP008213.1/23009525-23009694 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 8e-22
Identities = 105/124 (84%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| ||||||||||| ||||||||| ||||| | ||||| |||||||
Sbjct: 125 atgattagtattttttttgttattagaatataaaacataaatagtattttatatgtgact 66
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| |||||| | |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 aattttttaaaaaaaat-cataaaattttcaaataagacggacggtcaaacgttggacac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AAAA02022668.1/6110-6282 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 8e-22
Identities = 123/152 (80%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||| ||||||||| ||||||| |||||||||| | ||
Sbjct: 162 caacgtttgaccgttcgttttatttgaaatttttttatgattagtatttttattactctt 103
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
|||||||||||||||||||| ||||||||| |||||| | ||| ||||||||
Sbjct: 102 agatgataaaacatgaatagtactttatgtatgactaaatatttttaaatttttcataaa 43
Query: 133 attttcaaataaaacggacggtcaaacgttgg 164
||||||||||||||| ||| ||||||||||||
Sbjct: 42 attttcaaataaaacagacagtcaaacgttgg 11
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
|||| |||||||||||||| ||||||||||||||
Sbjct: 129 aaaaatttcaaataaaacgaacggtcaaacgttg 162
>RF01062;MIR812;DQ280619.1/7388-7543 39946:Oryza sativa Indica Group
Length = 156
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 112 tatttttattgttattagatgataaaacatgaatagtactttatgtgtgactaatttttt 53
>RF01062;MIR812;AAAA02017655.1/22485-22657 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 8e-22
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
||||||| || |||| ||| | ||||||||||||||||| ||||||| |||||
Sbjct: 173 ctattcacattcaacatttaatcgttcgtcttatttgaaaaaaaattatgattagtattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgacta 109
|||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 113 ttattgctattagatgataaaacatgaatagtactttatgtgtgacta 66
>RF01062;MIR812;AC105729.2/60866-60693 39947:Oryza sativa Japonica
Group
Length = 174
Score = 103 bits (52), Expect = 8e-22
Identities = 83/96 (86%)
Strand = Plus / Minus
Query: 14 aacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatta 73
||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 162 aacgtttgaccgttcgtcttatttgaattttttttatgattagtatttttattgctatta 103
Query: 74 gatgataaaacatgaatagaactttatgtgtgacta 109
|||||||||||||||||| ||||||||||||||||
Sbjct: 102 gatgataaaacatgaataatactttatgtgtgacta 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ccaacgtttcaccgttcgtcttattt 37
||||||||| ||||||||||||||||
Sbjct: 11 ccaacgtttgaccgttcgtcttattt 36
>RF01062;MIR812;AAAA02006308.1/42881-42720 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 114 atgattagtattcttattgttattagatgataaaacatgaacagtactttatgtgtgact 55
Query: 109 attttttt 116
||||||||
Sbjct: 54 attttttt 47
>RF01062;MIR812;AP005163.3/84135-84299 39947:Oryza sativa Japonica
Group
Length = 165
Score = 103 bits (52), Expect = 8e-22
Identities = 103/121 (85%), Gaps = 8/121 (6%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 118 atgattagtatttttattgttattagatgataaaacatgaatattactttatgtctgact 59
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| |||||| |||||| | ||||||||||| ||||||| |||||||||| ||||
Sbjct: 58 aatttttt--------ttcatatatttttcaaataagacggacgatcaaacgttgaacac 7
Query: 169 g 169
|
Sbjct: 6 g 6
>RF01062;MIR812;AP003512.3/72419-72259 39947:Oryza sativa Japonica
Group
Length = 161
Score = 103 bits (52), Expect = 8e-22
Identities = 136/169 (80%), Gaps = 12/169 (7%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||||| |||| ||| | ||||||||||||||||| ||||||| ||||||||
Sbjct: 158 ttcatatacaacatttgatcgttcgtcttatttgaaatcttttgatgattaatattttta 99
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnn 124
||||||||||||||||||||||||||| ||||||||||||| || |||||
Sbjct: 98 ttgttattagatgataaaacatgaataatactttatgtgtgattaattttt--------- 48
Query: 125 ttcataaaattttcaaataaaacggacggtcaaacgttggacacggatt 173
||||| ||||||||||| |||||| ||||||||||||||| |||||
Sbjct: 47 ---ataaatttttcaaataagacggacagtcaaacgttggacatggatt 2
>RF01062;MIR812;AC133334.8/22904-23076 39947:Oryza sativa Japonica
Group
Length = 173
Score = 103 bits (52), Expect = 8e-22
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| |||| |||||||||||||| ||||||| ||||||||||||||
Sbjct: 164 tccaacgtttaaccgctcgtcttatttgaaatttttctatgattagtatttttattgtta 105
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcata 130
||||||||||||||| ||||| | |||||||||||||| ||||| ||||||
Sbjct: 104 gtagatgataaaacataaatagtattttatgtgtgactaactttttttaatattttcata 45
Query: 131 aaattttcaaataaaacggacggtcaaacgttggacacggattt 174
|||||||| ||||| ||| ||| |||||| || |||| ||||||
Sbjct: 44 aaattttcgaataagacgaacgatcaaaccttcgacatggattt 1
>RF01062;MIR812;AAAA02034631.1/1636-1467 39946:Oryza sativa Indica
Group
Length = 170
Score = 103 bits (52), Expect = 8e-22
Identities = 103/121 (85%), Gaps = 3/121 (2%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 120 attagtattcttattgttattagatgataaaacattaataatactttatgtgtgactatt 61
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgga 171
||||| || ||||| |||| |||||| ||||| ||||||||||||||||||||
Sbjct: 60 ttttt---tattttttataaattttttaaataagacggatggtcaaacgttggacacgga 4
Query: 172 t 172
|
Sbjct: 3 t 3
>RF01062;MIR812;AP008214.1/13993675-13993504 39947:Oryza sativa
Japonica Group
Length = 172
Score = 103 bits (52), Expect = 8e-22
Identities = 99/116 (85%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| ||||| |||| ||||||||||||||||||| |||||||||||||
Sbjct: 172 ctattcatgtccaatgtttaaccgttcgtcttatttgaaaaaaaattatgattactattt 113
Query: 62 tt-attgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|| || ||||||||||||||||| ||||||| ||||||||| |||||||||||||
Sbjct: 112 tttatagttattagatgataaaatatgaataatactttatgtttgactattttttt 57
>RF01062;MIR812;AP005116.3/104187-104356 39947:Oryza sativa Japonica
Group
Length = 170
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 116 tatttttattgttattagatgataaaacatgaatagtacgttatgtgtgactattttttt 57
>RF01062;MIR812;AP008214.1/17882292-17882454 39947:Oryza sativa
Japonica Group
Length = 163
Score = 103 bits (52), Expect = 8e-22
Identities = 103/120 (85%), Gaps = 10/120 (8%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| |
Sbjct: 116 atgattagtatttttattgttattggatgataaaacatgaatagtactttatgtgtg--t 59
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| |||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 58 attttttt--------ttcataaatttttcaaataagacggatggtcaaacgttagacac 7
>RF01062;MIR812;AACV01018882.1/18464-18633 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 8e-22
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||
Sbjct: 118 tatttttattgttattagatgataaaacatgaataatagtttatgtgtgactaatttttt 59
Query: 117 nnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
||||||||||||| |||||| | ||| |||||||| ||| ||||||||
Sbjct: 58 atatttttttcataaaatttttaaataagatggatggtcaaacattgaacacggat 3
>RF01062;MIR812;AC107314.1/58368-58197 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 127 atgattaatatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 68
>RF01062;MIR812;CR855098.1/26082-26242 4530:Oryza sativa (rice)
Length = 161
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 114 atgattagtatttttattgttattagatgataatacatgaatagtactttatgtgtgact 55
Query: 109 attttttt 116
| ||||||
Sbjct: 54 aatttttt 47
>RF01062;MIR812;AP004991.3/152028-151859 39947:Oryza sativa Japonica
Group
Length = 170
Score = 103 bits (52), Expect = 8e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 118 tatttttgttgttattagatgataaaacatgaatagtactttatgtgtgactattttttt 59
>RF01062;MIR812;AACV01006839.1/7979-8153 39947:Oryza sativa Japonica
Group
Length = 175
Score = 103 bits (52), Expect = 8e-22
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| |||||| |||||||||||| ||||||| ||||||||||||||||
Sbjct: 164 caacgtttgaccgtttgtcttatttgaaaaaagattatgattagtatttttattgttatt 105
Query: 73 agatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||| | || ||||||||||| ||||||
Sbjct: 104 agatgataaaacatgaatagtaattcatgtgtgactaatttttt 61
>RF01062;MIR812;AAAA02011317.1/27519-27679 39946:Oryza sativa Indica
Group
Length = 161
Score = 103 bits (52), Expect = 8e-22
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
||||||| || |||||||| |||||||| ||||||||| ||||||| |||||
Sbjct: 161 ctattcacattcaacgtttggccgttcgttttatttgaaatttttttatgattagtattt 102
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgacta 109
|||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 101 ttattgctattagatgataaaacatgaatagtactttatgtgtgacta 54
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
|||| |||||||||||||| |||| |||||||||
Sbjct: 117 aaaaatttcaaataaaacgaacggccaaacgttg 150
>RF01062;MIR812;ABRL01000427.1/5583-5412 65489:Oryza barthii
Length = 172
Score = 103 bits (52), Expect = 8e-22
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| || |||||||| ||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 126 atgattaataattttattgctattagatgataaaatatgaatagtactttacgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| | ||| |||||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 66 aaatattttcaattttttcataaatttttcaaataaaacggacggtcaaacattggatac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
>RF01062;MIR812;AAAA02034929.1/6482-6321 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 6 tcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttat 65
|||| |||||| ||| | ||||||||||||||||| || |||| |||||||||
Sbjct: 159 tcatgtccaacatttaagcgttcgtcttatttgaaatttttttattattagtatttttat 100
Query: 66 tgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||| |||||||||||||||| |||||||||| ||||||||||||
Sbjct: 99 tgttattagacgataaaacatgaataggactttatgtgcgactattttttt 49
>RF01062;MIR812;AAAA02049793.1/470-298 39946:Oryza sativa Indica
Group
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| |||||||||| |||||||||||||||| || ||||||| ||||||||
Sbjct: 170 ttcatgtccaacgtttaaccgttcgtcttatttaaaacttttctatgattagtattttta 111
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttt 115
|| ||||||||||||||||||| ||||| | ||||| ||||||||||||||
Sbjct: 110 ttattattagatgataaaacataaatagtagtttatatgtgactatttttt 60
>RF01062;MIR812;AAAA02010841.1/4416-4257 39946:Oryza sativa Indica
Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 66 tgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnt 125
||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 108 tgttattagatgataaaacataaatagtactttatgtgtgactatttttttaaaaaaaat 49
Query: 126 tcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
| ||||| ||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 48 t-ataaatttttcaaataagacgaacggtcaaatgttggacacggat 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||| ||| |||||||||||||||||||
Sbjct: 10 tccaacatttgaccgttcgtcttatttgaa 39
>RF01062;MIR812;AAAA02026920.1/22562-22391 39946:Oryza sativa Indica
Group
Length = 172
Score = 101 bits (51), Expect = 3e-21
Identities = 128/159 (80%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| |||||||||| |||||| |||||||||||| |||| || || |||||
Sbjct: 169 ttcatgtccaacgtttgaccgtttgtcttatttgaaaaatttttatgactaatactttta 110
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnn 124
|||||||||||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 109 ttgttattagatgataaaacatgaatagtactttatgcttgactacatttttaaattttt 50
Query: 125 ttcataaaattttcaaataaaacggacggtcaaacgttg 163
|||||||| ||||||||||| || ||||||||||||||
Sbjct: 49 ttcataaatttttcaaataagacaaacggtcaaacgttg 11
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| || ||||||||||||||||||
Sbjct: 132 ttttcaaataagacaaacggtcaaacgttggaca 165
>RF01062;MIR812;AP008216.1/21581597-21581429 39947:Oryza sativa
Japonica Group
Length = 169
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||||||||
Sbjct: 126 atgattaatatttttattgttattagataataaagcatgaatagtactttatgtgtgact 67
Query: 109 atttttt 115
|||||||
Sbjct: 66 atttttt 60
>RF01062;MIR812;AAAA02020749.1/22281-22455 39946:Oryza sativa Indica
Group
Length = 175
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 128 atgattactatttttgttgttattagatgataaaatatgaatagtactttatgagtgact 69
Query: 109 atttttt 115
|||||||
Sbjct: 68 atttttt 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
|||| |||||| |||||||||||||| |||||||
Sbjct: 135 ttttaaaataagacggacggtcaaactttggaca 168
>RF01062;MIR812;AP008214.1/27534677-27534504 39947:Oryza sativa
Japonica Group
Length = 174
Score = 101 bits (51), Expect = 3e-21
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||| ||||||||||| ||||||| | |||||||||||||
Sbjct: 126 atgattaatatttttattgttatcagatgataaaatatgaataatattttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| ||||||| ||||| |||||| |||||| ||||| |||||||||
Sbjct: 66 attttttttaatttttttcataatatttttaaataagacggacaatcaaatgttggacac 7
Query: 169 gga 171
|||
Sbjct: 6 gga 4
>RF01062;MIR812;AACV01001613.1/49180-49352 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 4 attcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttt 63
|||||| ||||| |||| ||||||||| ||||| ||| ||||||||| ||||
Sbjct: 171 attcatctccaatgtttgaccgttcgttttattcgaagaatttttatgattactgctttt 112
Query: 64 attgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnn 123
||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 111 attgttattagatgataaaacatgaatagtactttatatgtgactaatttttttaaaatt 52
Query: 124 nttcataaaattttcaaataaaacggacggtcaaa 158
||| |||| |||| |||||| |||||||||||||
Sbjct: 51 tttcgtaaattttttaaataagacggacggtcaaa 17
>RF01062;MIR812;AC217582.2/115116-115285 4537:Oryza punctata
Length = 170
Score = 101 bits (51), Expect = 3e-21
Identities = 105/124 (84%), Gaps = 5/124 (4%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 121 atgattagtatttttgttgttattagatgataaaacataaatagtactttatgtgtgact 62
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
||||| | ||||| || ||||||||||| ||||| |||||||| ||||||||
Sbjct: 61 ttttttat-----tttttcattaatttttcaaataagacggatggtcaaacattggacac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
>RF01062;MIR812;AP008214.1/2886870-2887037 39947:Oryza sativa
Japonica Group
Length = 168
Score = 101 bits (51), Expect = 3e-21
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||| |||||||||||||||| ||||||| ||||||||| |||||
Sbjct: 123 atgattactatttttattattattagatgataaaatatgaataatactttatgtatgact 64
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttg 163
| |||||| |||||||| |||| |||||||||| | ||||||||||||
Sbjct: 63 aatttttttaaaatttttcataaattttttaaataaaacgaatggtcaaacgttg 9
>RF01062;MIR812;AP004049.2/109707-109869 39947:Oryza sativa Japonica
Group
Length = 163
Score = 101 bits (51), Expect = 3e-21
Identities = 88/103 (85%)
Strand = Plus / Minus
Query: 14 aacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatta 73
||||||||||||||||||||||||||| ||||||| ||||||| |||||||||
Sbjct: 151 aacgtttcaccgttcgtcttatttgaaaaaagtttatgattagtatttttgttgttatta 92
Query: 74 gatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||| || ||||| ||||||||| |||||| ||||||
Sbjct: 91 gatgataaaatataaatagtactttatgtatgactaatttttt 49
>RF01062;MIR812;AP008211.1/27196732-27196904 39947:Oryza sativa
Japonica Group
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 124 gattaatatttttattgttattagatgataaaacacgaatattactttatgtgtgactaa 65
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
|| || |||||||||||| |||||| || ||||||||||||||| ||||||
Sbjct: 64 cttattttaattttctcataaaatttttaaataagacagacggtcaaacgttgaacacgg 5
Query: 171 att 173
|||
Sbjct: 4 att 2
>RF01062;MIR812;AL731784.3/135505-135675 4530:Oryza sativa (rice)
Length = 171
Score = 101 bits (51), Expect = 3e-21
Identities = 128/159 (80%)
Strand = Plus / Minus
Query: 14 aacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatta 73
||||||| | ||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 161 aacgtttgatcgttcgtcttatttgaaatttttttatgattaatatttttattgctatta 102
Query: 74 gatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaa 133
||||||||||||||||| | | |||||||| ||||| | ||| |||| |||
Sbjct: 101 gatgataaaacatgaattgtaatttatgtgcgactaaatgtttttaaatttttcacaaat 42
Query: 134 ttttcaaataaaacggacggtcaaacgttggacacggat 172
||||||||||| ||||||||||||||||||| |||||||
Sbjct: 41 ttttcaaataagacggacggtcaaacgttgggcacggat 3
>RF01062;MIR812;AACV01004704.1/18959-18788 39947:Oryza sativa
Japonica Group
Length = 172
Score = 101 bits (51), Expect = 3e-21
Identities = 101/119 (84%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |
Sbjct: 122 attagtatttttattgttgttagatgataaaacatgaatagtactttatgtatgactaat 63
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
||||| |||||||| ||||||||||| ||| |||||| ||||| ||||||||
Sbjct: 62 ttttttcaaatttttcataaatttttcaaataagacgaacggtc-aacgtcggacacgg 5
>RF01062;MIR812;AC112209.4/58229-58057 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| |||||||||| |||||||||||||||| |||||||| |||| |||||||||||
Sbjct: 124 gattaatatttttatttttattagatgataaaatatgaatagcacttcatgtgtgactaa 65
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
||| || ||||||| ||||||||||| |||||||||||||||| |||||||
Sbjct: 64 tttattttaattttctcataaatttttcaaataagacggacggtcaaacgtcagacacgg 5
Query: 171 att 173
|||
Sbjct: 4 att 2
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 101 bits (51), Expect = 3e-21
Identities = 122/151 (80%)
Strand = Plus / Plus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||| ||||||||||||| ||||||| ||||||| ||| ||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaaattttttatgattagtatttttgttgctatt 107
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
|||||||||||||||||||| |||||||||||||||| | || |||| |||
Sbjct: 108 agatgataaaacatgaatagtactttatgtgtgactaaatgcttttaattttttcacaaa 167
Query: 133 attttcaaataaaacggacggtcaaacgttg 163
||||||||||| ||||||||||||||||||
Sbjct: 168 tttttcaaataagacggacggtcaaacgttg 198
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||||||
Sbjct: 81 aaaattttcaaataagacggacggtcaaacgttg 48
>RF01062;MIR812;AAAA02030424.1/11892-11719 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 87/102 (85%)
Strand = Plus / Minus
Query: 8 atatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattg 67
||||||||||||| |||||||||||||||| || || |||| ||||||||||
Sbjct: 168 atatccaacgtttgaccgttcgtcttatttaaaattcttttataattagtatttttatta 109
Query: 68 ttattagatgataaaacatgaatagaactttatgtgtgacta 109
||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 108 ttattagatgataaaacatgaatagtactttatgtgcgacta 67
>RF01062;MIR812;AAAA02032399.1/2847-2676 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 106/125 (84%), Gaps = 5/125 (4%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagat--gataaaacatgaatagaactttatgtgtga 106
||||||| ||||||||||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 125 atgattagtatttttattgttattatatatgataaaacatgaatagtactttatgtgtga 66
Query: 107 ctatttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggac 166
|||||||| |||||||| ||||| ||||| || ||||||||||||||||||
Sbjct: 65 ttatttttt---aattttttcataaatttttcgaataagaccgacggtcaaacgttggac 9
Query: 167 acgga 171
|||||
Sbjct: 8 acgga 4
>RF01062;MIR812;AAAA02037624.1/5275-5103 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 99/118 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 126 atgattaatatttttattgttattagatgataaaacatgaatagtgctttatgcttgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggac 166
| |||||| || ||||| |||| |||||| | |||||||||||||||||||
Sbjct: 66 aatttttttaattttttttataaattttttaaataagatggacggtcaaacgttggac 9
>RF01062;MIR812;AAAA02009208.1/15265-15096 39946:Oryza sativa Indica
Group
Length = 170
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
|||||||||||| ||| |||||||||||||||| || ||||||| |||||| |
Sbjct: 167 ttcatatccaacatttgaccgttcgtcttatttaaaaaaatt--atgattagtattttaa 110
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttt 115
|||||||||||| ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 109 ttgttattagattataaaacatgaatagtactttatgtgtgactgtttttt 59
>RF01062;MIR812;AL837527.2/105187-105025 4530:Oryza sativa (rice)
Length = 163
Score = 99.6 bits (50), Expect = 1e-20
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 154 tccaacatttgaccgttcgtcttatttgaaaaaagattatgattagtatttttattgtta 95
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||| ||||||||||||||| ||||||| |||| ||| ||||||
Sbjct: 94 ttagatcataaaacatgaatagtactttatatgtggctaatttttt 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| ||| ||||||||| ||||||||
Sbjct: 123 ttttcaaataagacgaacggtcaaatgttggaca 156
>RF01062;MIR812;AAAA02027312.1/3814-3986 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 130/162 (80%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| |||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 162 caacgtttgaccgttcgtcttatttaaaaaatttttatgattactatttttattgttatt 103
Query: 73 agatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaa 132
||||| |||||||||||||| | ||||| ||| |||| |||| || ||||
Sbjct: 102 agatggtaaaacatgaatagtattttatatgtaactaattttaataaaattttttataat 43
Query: 133 attttcaaataaaacggacggtcaaacgttggacacggattt 174
||||| |||||| ||||||||||||| |||||| ||||||||
Sbjct: 42 atttttaaataagacggacggtcaaatgttggatacggattt 1
>RF01062;MIR812;AP003286.3/51081-50906 39947:Oryza sativa Japonica
Group
Length = 176
Score = 99.6 bits (50), Expect = 1e-20
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 173 ttcatatccaatgtttgaccgttcgtcttatttgaaaaaaatttatgattaatattttta 114
Query: 65 ttgttattagatgataaaacatgaatagaactttatgt 102
||||||||||||||||||| || ||||| |||||||||
Sbjct: 113 ttgttattagatgataaaatataaatagtactttatgt 76
>RF01062;MIR812;AP008209.1/13818681-13818846 39947:Oryza sativa
Japonica Group
Length = 166
Score = 99.6 bits (50), Expect = 1e-20
Identities = 87/102 (85%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||
Sbjct: 119 tatttttattgttattagataataaaacatgaatagtactttatgtgtgactaatttttt 60
Query: 117 nnnnnnnnttcataaaattttcaaataaaacggacggtcaaa 158
|||||||| |||| |||||| ||||| |||||||
Sbjct: 59 taatatttttcataaattttttaaataagacggatggtcaaa 18
>RF01062;MIR812;AC136219.2/48203-48371 39947:Oryza sativa Japonica
Group
Length = 169
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 119 atgattaatatttttattgttattagatgataaaacatgaataatactttatgtgtgact 60
Query: 109 attttt 114
|||||
Sbjct: 59 tttttt 54
>RF01062;MIR812;AP008210.1/12101104-12100931 39947:Oryza sativa
Japonica Group
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 119/146 (81%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 14 aacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatta 73
||||||| || |||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 162 aacgtttgactgttcgtcttatttgaaatttttttatgattagtatttttattgttatta 103
Query: 74 gatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaa 133
|||||||||||||||||| ||||||||||||| || || ||| |||||||||
Sbjct: 102 aatgataaaacatgaatagtactttatgtgtgattaattctttttaattttttcataaaa 43
Query: 134 ttttcaaataaaacggacggtcaaac 159
|||| |||||||||||| |||||||
Sbjct: 42 tttt-aaataaaacggatagtcaaac 18
>RF01062;MIR812;AAAA02027864.1/12883-12726 39946:Oryza sativa Indica
Group
Length = 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 59 tttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 102 tttttattgttattagatgataaaacatgaataatactttatgtgtgactattttttt 45
>RF01062;MIR812;AP008207.1/10978256-10978088 39947:Oryza sativa
Japonica Group
Length = 169
Score = 99.6 bits (50), Expect = 1e-20
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 9 tatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgt 68
|||||||||||| |||||||||||||||| || ||||||| ||||||||||||
Sbjct: 162 tatccaacgtttaaccgttcgtcttatttaaaaatttttcatgattagtatttttattgt 103
Query: 69 tattagatgataaaacatgaatagaactttatgtgtgactattttt 114
||||||||||||||||||||||| | ||||| ||||||| |||||
Sbjct: 102 tattagatgataaaacatgaataatattttatatgtgacttttttt 57
>RF01062;MIR812;AP008208.1/14599693-14599861 39947:Oryza sativa
Japonica Group
Length = 169
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 123 atgattactatttttattgttattagatgataaaacataaataatattttatgtgtgact 64
Query: 109 attttt 114
||||||
Sbjct: 63 attttt 58
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttg 163
||||||||||| |||||| |||||||||||
Sbjct: 129 ttttcaaataagacggacagtcaaacgttg 158
>RF01062;MIR812;AACV01001001.1/3483-3308 39947:Oryza sativa Japonica
Group
Length = 176
Score = 99.6 bits (50), Expect = 1e-20
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
||||| |||| ||||| ||||||||||||| ||||||| |||||||||| |||
Sbjct: 167 tccaatgtttaaccgtccgtcttatttgaaaaaaatttatgattagtatttttattatta 108
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 107 ttagatgataaaacatgaataatactttatgtgtgactaatttttt 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| ||||||||| |||| |||||||
Sbjct: 136 ttttcaaataagacggacggttaaacattggaca 169
>RF01062;MIR812;AP008218.1/9625931-9625793 39947:Oryza sativa
Japonica Group
Length = 139
Score = 99.6 bits (50), Expect = 1e-20
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
|||||||||||||||| ||| ||||||||||||||| ||||||| |||||| |
Sbjct: 136 ttcatatccaacgtttgaccattcgtcttatttgaattttttttatgattagtattttca 77
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactat 110
|||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 76 atgttattagacgataaaacatgaataatactttatgtgtgactat 31
>RF01062;MIR812;AAAA02000846.1/2365-2538 39946:Oryza sativa Indica
Group
Length = 174
Score = 97.6 bits (49), Expect = 5e-20
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||| || ||||| ||||| | |||||||
Sbjct: 126 atgattaatatttttattgttattagatgataaaatataaatagtactttgtatgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| ||| || ||||||| ||||||||||| |||||||||||||||||| | ||
Sbjct: 66 aatttattttaattttctcataaatttttcaaataagacggacggtcaaacgttgaatac 7
Query: 169 ggatt 173
|||||
Sbjct: 6 ggatt 2
>RF01062;MIR812;AAAA02021172.1/33122-33292 39946:Oryza sativa Indica
Group
Length = 171
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 121 attagtatttttattgttattagatgataaaacatgagtagtattttatgtgtgactatt 62
Query: 112 ttttt 116
|||||
Sbjct: 61 ttttt 57
>RF01062;MIR812;AAAA02021919.1/31168-31327 39946:Oryza sativa Indica
Group
Length = 160
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
Sbjct: 120 gattaatatttttattgttattagatgataaaacatgaatagtactttatgtatgacttt 61
Query: 111 ttttt 115
|||||
Sbjct: 60 ttttt 56
>RF01062;MIR812;AACV01025173.1/5566-5398 39947:Oryza sativa Japonica
Group
Length = 169
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||
Sbjct: 123 atgattagtatttttattgttattaaatgataaaacatgaatagtactttatgtatgact 64
Query: 109 atttt 113
|||||
Sbjct: 63 atttt 59
>RF01062;MIR812;AC144737.2/50271-50443 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 5e-20
Identities = 101/121 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||| ||||||| ||||||| ||||| ||||||||
Sbjct: 126 atgattagtatttttattgctattagataataaaacttgaatagttctttacgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| | ||| |||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 66 aaatatttttaaatttttcacaaaattttcaaataagacggacggtcaaacgttggacac 7
Query: 169 g 169
|
Sbjct: 6 g 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AAAA02012023.1/6971-6801 39946:Oryza sativa Indica
Group
Length = 171
Score = 97.6 bits (49), Expect = 5e-20
Identities = 102/121 (84%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 125 atgattagtatttttattggtattagatgataaaacataaatagtactttatgtgtgact 66
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| |||||| || || ||||||| |||||||||||| |||||||| ||| ||||
Sbjct: 65 aattttttaaattatttttat-aaatttttaaataaaacggatggtcaaacattgaacac 7
Query: 169 g 169
|
Sbjct: 6 g 6
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttgga 165
||||||||||||||||||| | |||| |||||||||
Sbjct: 127 aaaattttcaaataaaacgaatggtctaacgttgga 162
>RF01062;MIR812;AP008211.1/14509030-14508859 39947:Oryza sativa
Japonica Group
Length = 172
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 60 ttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 115 ttttattgttattagatgataaaacatgaataatactttatgtgtgactattttttt 59
>RF01062;MIR812;AP008207.1/38356600-38356430 39947:Oryza sativa
Japonica Group
Length = 171
Score = 97.6 bits (49), Expect = 5e-20
Identities = 101/121 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||| |||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 126 atgattagcatttttgttgttattcgatgataaaacataaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
||||||| || |||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 66 attttttaaaaaaaaattgataattttttcaaataagacggacggtcaaacattggacac 7
Query: 169 g 169
|
Sbjct: 6 g 6
>RF01062;MIR812;AAAA02029330.1/4924-4752 39946:Oryza sativa Indica
Group
Length = 173
Score = 97.6 bits (49), Expect = 5e-20
Identities = 114/141 (80%)
Strand = Plus / Minus
Query: 24 cgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagatgataaaa 83
||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||
Sbjct: 151 cgttcgtcttatttgaaaattttttatgattagtatttttattgctattagatgttaaaa 92
Query: 84 catgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaattttcaaata 143
||| ||||| |||||||||||||||| | ||| |||| ||||||||||||||
Sbjct: 91 cataaatagtactttatgtgtgactaaatattttcaattttttcacaaaattttcaaata 32
Query: 144 aaacggacggtcaaacgttgg 164
| |||||| ||||||||||||
Sbjct: 31 agacggacagtcaaacgttgg 11
>RF01062;MIR812;AL662944.3/116257-116430 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 5e-20
Identities = 102/121 (84%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| |||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 127 atgattattatttttgttgttattagatgataaaacatgaatagtattttatgtgtgact 68
Query: 109 a-tttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggaca 167
| ||||| |||||||| ||||||||||| | | ||||||||||||||||||
Sbjct: 67 agcatttttaattttttttcataaatttttcaaataagatgcacggtcaaacgttggaca 8
Query: 168 c 168
|
Sbjct: 7 c 7
>RF01062;MIR812;AP005871.3/44209-44382 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 5e-20
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||||||||||||||||||||||| ||||||| || ||| |||| ||||
Sbjct: 163 caacgtttcaccgttcgtcttatttgaaaaatttttatgattagtagtttcattgctatt 104
Query: 73 agatgataaaacatgaatagaactttatgtgtgacta 109
|||||||||||||| ||||| ||||||||||||||||
Sbjct: 103 agatgataaaacattaatagtactttatgtgtgacta 67
>RF01062;MIR812;AC105729.2/7494-7320 39947:Oryza sativa Japonica
Group
Length = 175
Score = 97.6 bits (49), Expect = 5e-20
Identities = 101/121 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaatatgaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| | ||| |||| |||| |||||||||| |||| |||||||||||||| |||
Sbjct: 66 aaatatttttaattttttcacaaaaatttcaaataagacgggcggtcaaacgttgggcac 7
Query: 169 g 169
|
Sbjct: 6 g 6
>RF01062;MIR812;AP005680.3/12832-12659 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 5e-20
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||| ||||||||||| |||||||||||||||| || ||||||||||||| ||||||
Sbjct: 119 tattttcattgttattagctgataaaacatgaataataccttatgtgtgactaatttttt 60
Query: 117 nnnnnnnnt-tcataaaattttcaaataaaacggacggtcaaacgttggacacggat 172
| | |||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 59 taaaaaaatattataaaatttttaaataagacggacggtcaaacgttggacacggat 3
>RF01062;MIR812;AP008212.1/8362907-8363079 39947:Oryza sativa
Japonica Group
Length = 173
Score = 97.6 bits (49), Expect = 5e-20
Identities = 125/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
||||| || ||||||| ||||||||||||||||| | || |||| ||||||||
Sbjct: 170 ttcatgtctaacgtttgaccgttcgtcttatttggaaaaaatttataattagtattttta 111
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnn 124
||||||||| |||||||||||| ||| |||||||||||||||||||||||
Sbjct: 110 ttgttattacatgataaaacattggtagtactttatgtgtgactattttttt-taatttt 52
Query: 125 ttcataaaattttcaaataaaacggacggtcaaa 158
|||||||||||||||||||| ||| |||||||||
Sbjct: 51 ttcataaaattttcaaataagacgaacggtcaaa 18
>RF01062;MIR812;AP005493.3/5146-5314 39947:Oryza sativa Japonica
Group
Length = 169
Score = 97.6 bits (49), Expect = 5e-20
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 24 cgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagatgataaaa 83
||||||||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 149 cgttcgtcttatttgaaatttttttatgattagtatttctattgttattagatgataaaa 90
Query: 84 catgaatagaactttatgtgtgact 108
||||||||| |||||||||||||||
Sbjct: 89 catgaatagtactttatgtgtgact 65
>RF01062;MIR812;AAAA02034559.1/2900-3069 39946:Oryza sativa Indica
Group
Length = 170
Score = 97.6 bits (49), Expect = 5e-20
Identities = 142/174 (81%), Gaps = 5/174 (2%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
||||| |||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct: 170 ctattaatatccaacgtttcaccgtttatcttatttgaaatttttt-atgattagtattt 112
Query: 62 tt-attgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnn 120
|| |||||| ||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 111 tttattgttgttagatgataaaacacgaagagtactttatgtgtgactatttttt---aa 55
Query: 121 nnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
| ||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 54 aaaaattataaatttttcaaataagacggatagtcaaacgttggacacggattt 1
>RF01062;MIR812;AAAA02015035.1/36629-36800 39946:Oryza sativa Indica
Group
Length = 172
Score = 97.6 bits (49), Expect = 5e-20
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| ||||||||||||||||||| |||| || ||||||||||||||||
Sbjct: 161 caacgtttgaccgttcgtcttatttgaaaaacaattatgactagtatttttattgttatt 102
Query: 73 agatgataaaacatgaatagaactttatgtgtgacta 109
||||||||| |||||||||| |||||||| |||||||
Sbjct: 101 agatgataatacatgaatagtactttatgcgtgacta 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttg 163
||||||||||| ||| ||||||||||||||
Sbjct: 132 ttttcaaataagacgaacggtcaaacgttg 161
>RF01062;MIR812;AP008208.1/21859946-21859775 39947:Oryza sativa
Japonica Group
Length = 172
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||||||
Sbjct: 122 attagtatttttattgttattagatgataaaacatgaatagtaatttatgtttgactatt 63
Query: 112 ttttt 116
|||||
Sbjct: 62 ttttt 58
>RF01058;MIR806;AP004661.3/132951-132713 39947:Oryza sativa Japonica
Group
Length = 239
Score = 97.6 bits (49), Expect = 5e-20
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 24 cgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagatgataaaa 83
||||||||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 56 cgttcgtcttatttgaaatttttttatgattagtatttctattgttattagatgataaaa 115
Query: 84 catgaatagaactttatgtgtgact 108
||||||||| |||||||||||||||
Sbjct: 116 catgaatagtactttatgtgtgact 140
>RF01062;MIR812;AAAA02008165.1/41728-41556 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 122/152 (80%)
Strand = Plus / Minus
Query: 14 aacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatta 73
||||||| ||||||| ||||||||||| ||||||| |||| ||||| |||||
Sbjct: 161 aacgtttgaccgttcttcttatttgaaatttttttatgattagcatttctattgctatta 102
Query: 74 gatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaa 133
|||||||||| |||||||| |||||||||||||||| | ||| || ||||||
Sbjct: 101 gatgataaaatatgaatagtactttatgtgtgactaaatatttttaatttttttataaaa 42
Query: 134 ttttcaaataaaacggacggtcaaacgttgga 165
||||||||||| |||||||||||||| |||||
Sbjct: 41 ttttcaaataagacggacggtcaaacattgga 10
>RF01062;MIR812;AAAA02003456.1/35790-35631 39946:Oryza sativa Indica
Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| | |||||||| |||||| ||||||||| || ||||||| |||||
Sbjct: 160 ctattcatgttcaacgtttgaccgtttgtcttatttaaaatttttttatgattaatattt 101
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgacta 109
|||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 100 ttattgctattagatgataaaacatgaatattactttatgtgtgacta 53
>RF01062;MIR812;AL731610.4/75253-75088 39947:Oryza sativa Japonica
Group
Length = 166
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 111 tattcttattgttattagatgataaaacatgaatagtattttatgtgtgactattttttt 52
>RF01062;MIR812;AACV01009504.1/253-81 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 103/124 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaacatgaataatactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| | ||| || | |||| |||||||||| |||||||||||||||||| |||
Sbjct: 66 aaatattttcaagttttttaaaaaaatttcaaataagacggacggtcaaacgttgagcac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
>RF01062;MIR812;AP008215.1/19973259-19973086 39947:Oryza sativa
Japonica Group
Length = 174
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||| |||||||||||||||||| |||| ||||||||||
Sbjct: 128 atgattaatatttttattgttattaaatgataaaacatgaatagtacttgatgtgtgact 69
Query: 109 attttttt 116
| ||||||
Sbjct: 68 aatttttt 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 141 ataaaacggacggtcaaacgttggacacg 169
|||| ||||||||||||||||||||||||
Sbjct: 141 ataagacggacggtcaaacgttggacacg 169
>RF01062;MIR812;AP003838.3/75445-75617 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 126 atgattagtatttttgttgttattagatgataaaacatgaatagtactttacgtgtgact 67
Query: 109 attttttt 116
| ||||||
Sbjct: 66 aatttttt 59
>RF01062;MIR812;AC136218.2/76973-77145 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 126 atgattagtatttttattgctattagatgataaaacataaatagtactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttgg 164
| | ||| |||| ||| ||||||||||| | |||||||||||||||||
Sbjct: 66 aaatattttcaaatttttcacaaatttttcaaataagatggacggtcaaacgttgg 11
>RF01062;MIR812;AACV01013166.1/3571-3410 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||
Sbjct: 115 atgattagtatttttattgttattagatgataaaatatgaatagtaatttatgtgtgact 56
Query: 109 attttttt 116
| ||||||
Sbjct: 55 aatttttt 48
>RF01062;MIR812;AP005709.3/86155-85985 39947:Oryza sativa Japonica
Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 101/120 (84%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||| ||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 124 atgattagtattgttattattattagatgataaaacatgaatattactttatgcgtgact 65
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||| |||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 64 ctttttt--aatatttttcataaatttttcaaataagacggacggtcaaacgttgaacac 7
>RF01062;MIR812;AP008215.1/9852035-9851863 39947:Oryza sativa
Japonica Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 103/124 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 126 atgattagcatttttattattattaaatgataaaacatgaataatactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||||||| || |||| ||||||||||| | ||||||| ||||||||||||
Sbjct: 66 atttttttataattttttgttaaatttttcaaataagatggacggttaaacgttggacat 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
>RF01062;MIR812;AACV01016599.1/10901-10728 39947:Oryza sativa
Japonica Group
Length = 174
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||| ||||| ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 126 atgattagtattattattattattagatcataaaacatgaatagtactttatgtgtgact 67
Query: 109 attttttt 116
||||||||
Sbjct: 66 attttttt 59
>RF01062;MIR812;AACV01011622.1/26944-27115 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| ||||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 163 tccaacgtttgaccgttcgtcttatttgaaattttttcatgattagtgtttttattgtta 104
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactattttt 114
||| |||||||||||||||||| ||||||| | ||||| |||||
Sbjct: 103 ttacatgataaaacatgaatagtactttatatatgacttttttt 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttggaca 167
|||| |||||||||| ||| ||||||||||||||||||
Sbjct: 128 aaaaatttcaaataagacgaacggtcaaacgttggaca 165
>RF01062;MIR812;AP008217.1/10677501-10677332 39947:Oryza sativa
Japonica Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 124 atgattagtatttttattgttattgaatgataaaacatgaatagaactttatacgtgact 65
Query: 109 attttttt 116
||||||||
Sbjct: 64 attttttt 57
>RF01062;MIR812;AAAA02038713.1/1148-1318 39946:Oryza sativa Indica
Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||| |||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 124 atgattagtatttgtattgttattagatgataaaacatgaatagtattttatgtgtgact 65
Query: 109 attttttt 116
| ||||||
Sbjct: 64 aatttttt 57
>RF01062;MIR812;AAAA02020803.1/72981-73171 39946:Oryza sativa Indica
Group
Length = 191
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 117 tatttttattgttattagatgataaaacatgaatagtactttatatgtgactaatttttt 58
>RF01062;MIR812;AP006849.2/17157-17317 39947:Oryza sativa Japonica
Group
Length = 161
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| |||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 115 atgattagtatttttgttgttattagatgataaaacatgaatagtattttatgtgtgact 56
Query: 109 attttttt 116
| ||||||
Sbjct: 55 aatttttt 48
>RF01062;MIR812;AAAA02022227.1/47381-47207 39946:Oryza sativa Indica
Group
Length = 175
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||| ||||| ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 127 atgattagtattattattattattagatcataaaacatgaatagtactttatgtgtgact 68
Query: 109 attttttt 116
||||||||
Sbjct: 67 attttttt 60
>RF01062;MIR812;AP008208.1/28952745-28952568 39947:Oryza sativa
Japonica Group
Length = 178
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 116 tatttttattgttattagataataaaacataaatagtactttatgtgtgactattttttt 57
>RF01062;MIR812;AP008217.1/4338916-4338753 39947:Oryza sativa
Japonica Group
Length = 164
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||
Sbjct: 116 atgattagtatttttattgttattagatgataaaatatgaatagtattttatgtgtgact 57
Query: 109 attttttt 116
|| |||||
Sbjct: 56 atcttttt 49
>RF01062;MIR812;AP008215.1/8653838-8654005 39947:Oryza sativa
Japonica Group
Length = 168
Score = 95.6 bits (48), Expect = 2e-19
Identities = 103/124 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||| |||||||||||||||||| ||||| | |||||||||||||||
Sbjct: 126 atgattagtatttttaatgttattagatgataaaatatgaacaatactttatgtgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| ||||| | |||||||||||||||||| || ||||||||||| || |||||
Sbjct: 66 aatttttaaaaatttatacataaaattttcaaataagacagacggtcaaacattagacac 7
Query: 169 ggat 172
||||
Sbjct: 6 ggat 3
>RF01062;MIR812;AP004079.2/68011-68172 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 14 aacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatta 73
||||||| |||||||||||||||| || ||||||| ||||||| |||||||||
Sbjct: 150 aacgtttgaccgttcgtcttatttaaaaaaaatttatgattaatatttttgttgttatta 91
Query: 74 gatgataaaacatgaatagaactttatgtgtgacta 109
||||||||||||||||||| |||||||||| |||||
Sbjct: 90 gatgataaaacatgaatagtactttatgtgcgacta 55
>RF01062;MIR812;AAAA02001388.1/1048-1218 39946:Oryza sativa Indica
Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 92/108 (85%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| |||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 122 attagtatttttattgttattagatgataaaacatgaatagtaatttatgtgtgacttaa 63
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaac 159
||||| || |||||||||| |||||||||||||||||||||
Sbjct: 62 ttttttaaaaaaatt-ataaaattttgaaataaaacggacggtcaaac 16
>RF01062;MIR812;AAAA02017615.1/8389-8232 39946:Oryza sativa Indica
Group
Length = 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||
Sbjct: 111 atgattactatttttattgttattaggtgataaaatatgaataatactttatgtgtgact 52
Query: 109 attttttt 116
| ||||||
Sbjct: 51 aatttttt 44
>RF01062;MIR812;AAAA02018618.1/4302-4134 39946:Oryza sativa Indica
Group
Length = 169
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | |||
Sbjct: 122 atgattagtatttttattgttattagatgataaaacatgaatatcactttatgtttaact 63
Query: 109 attttttt 116
||||||||
Sbjct: 62 attttttt 55
>RF01062;MIR812;AAAA02025138.1/11002-11170 39946:Oryza sativa Indica
Group
Length = 169
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 122 atgattagtatttttattgttattagatgataaaacatgaataatactttatgtgtgact 63
>RF01062;MIR812;AACV01006839.1/6551-6720 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 126 atgattagtatttttatcgttatcagatgataaaacataaatagtactttatgtgtgact 67
Query: 109 attttttt 116
||||||||
Sbjct: 66 attttttt 59
>RF01062;MIR812;AACV01025273.1/3037-2868 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 124 atgattagtatttttgttgttattagatgataaaacatgaatagtactttatgtatgact 65
Query: 109 attttttt 116
| ||||||
Sbjct: 64 aatttttt 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaac 159
||||||||||||||||||| ||| ||||||
Sbjct: 126 aaaattttcaaataaaacgaacgatcaaac 155
>RF01062;MIR812;AP008216.1/16998501-16998655 39947:Oryza sativa
Japonica Group
Length = 155
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 115 tatttttattgttattagatgataaaacataaatagtactttatgtgtaactattttttt 56
>RF01062;MIR812;FJ745364.1/829-991 39946:Oryza sativa Indica Group
Length = 163
Score = 95.6 bits (48), Expect = 2e-19
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttta 64
|||||||||| ||||| ||| ||||||||||||||| ||||||| ||||||||
Sbjct: 163 ttcatatccagcgtttgaccattcgtcttatttgaatttttttcatgattagtattttta 104
Query: 65 ttgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||| ||||| | ||||||||||||||| |||||||||||||||| ||||||
Sbjct: 103 ttgt-attaggttataaaacatgaatagtactttatgtgtgactaatttttt 53
>RF01062;MIR812;AP003231.3/62161-62330 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 122 attagtatttttattgttattagatgataaaacatgaatagtacttcatgtgagactatt 63
Query: 112 tttt 115
||||
Sbjct: 62 tttt 59
>RF01062;MIR812;AACV01015179.1/5893-5722 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 104/124 (83%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||||
Sbjct: 123 gattaatatttttattgttattagatgataaaacatgaatagtactttatatttgactaa 64
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
||| || |||| ||||||| |||||| || |||||| |||||||||||||||
Sbjct: 63 tttattctaattttctcat-aaatttttaaataagacagacggtgaaacgttggacacgg 5
Query: 171 attt 174
||||
Sbjct: 4 attt 1
>RF01062;MIR812;AP003681.3/81305-81133 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
||||||| ||||||||||| || |||||||||||| || ||||||| |||||
Sbjct: 173 ctattcacatccaacgtttaactattcgtcttatttaaaaaaattttatgattattattt 114
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgacta 109
|||||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct: 113 ttattgtttttagatgataaaccatgaatagtactttatgtgtgacta 66
>RF01062;MIR812;AACV01008141.1/24734-24562 39947:Oryza sativa
Japonica Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 127 atgattagtatttttattgctattagatgataaaacataaatagcactttatgtgtgact 68
Query: 109 attttttt 116
| ||||||
Sbjct: 67 aatttttt 60
>RF01062;MIR812;AP008209.1/19056884-19056712 39947:Oryza sativa
Japonica Group
Length = 173
Score = 93.7 bits (47), Expect = 8e-19
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 59 tttttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnn 118
||||||||| ||||||||||||||| |||||||| |||||||||||||||| | |||
Sbjct: 116 tttttattgctattagatgataaaatatgaatagtactttatgtgtgactaaatattttc 57
Query: 119 nnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacg 169
|||| ||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 56 aaatttttcacaaatttttcaaataagacggacggtcaaacgttgggcacg 6
>RF01062;MIR812;BX842608.1/118530-118360 39947:Oryza sativa Japonica
Group
Length = 171
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||
Sbjct: 122 atgattaatatttttattgttactagatgataaaacatgaatagtactttatctgtgact 63
Query: 109 atttttt 115
| |||||
Sbjct: 62 aattttt 56
>RF01062;MIR812;AP003871.3/21703-21544 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 113 atgattagtatttttgttgttattagatgataaaacatgaatattactttatatgtgact 54
Query: 109 atttttt 115
|||||||
Sbjct: 53 atttttt 47
>RF01062;MIR812;AAAA02014569.1/2298-2466 39946:Oryza sativa Indica
Group
Length = 169
Score = 93.7 bits (47), Expect = 8e-19
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 122 attagtatttttgttgttattagatgataaaacatgaataatattttatgtgtaactatt 63
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgtt 162
||||| || ||||| ||||||||||||||||||||| |||||||
Sbjct: 62 tttttaaaaaaaatt-ataaatttttcaaataaaacggacggttaaacgtt 13
>RF01062;MIR812;AAAA02023939.1/14060-13889 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 8e-19
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||
Sbjct: 126 atgattactatttttattgttagtagatgataaaacataaataatactttatgcgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
| ||||| ||| ||||||||||||||| ||| | ||||||||||||| |||
Sbjct: 66 ttgtttttttaattttctcaaaaaattttcaaataagacgtatggtcaaacgttggtcac 7
Query: 169 gga 171
|||
Sbjct: 6 gga 4
>RF01062;MIR812;AC217198.1/122089-122259 4537:Oryza punctata
Length = 171
Score = 93.7 bits (47), Expect = 8e-19
Identities = 127/158 (80%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| ||||| |||||||||| || ||||||| ||||||||||||||
Sbjct: 162 tccaacgtttgaccgtccgtcttattttaaagaaatttatgattaatatttttattgtta 103
Query: 71 ttagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcata 130
||||||||||||||||||||| |||||||| || || |||||| ||||||
Sbjct: 102 ttagatgataaaacatgaataatactttatgagtaac--ttttttaaaatttttttcata 45
Query: 131 aaattttcaaataaaacggacggtcaaacgttggacac 168
|| |||| ||||||||||||| |||||| |||||||||
Sbjct: 44 aattttttaaataaaacggacagtcaaatgttggacac 7
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 139 aaataaaacggacggtcaaacgttggacacg 169
|||||| ||||||||||||||||||||||||
Sbjct: 136 aaataagacggacggtcaaacgttggacacg 166
>RF01062;MIR812;AAAA02031075.1/4258-4434 39946:Oryza sativa Indica
Group
Length = 177
Score = 93.7 bits (47), Expect = 8e-19
Identities = 105/126 (83%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||| |||
Sbjct: 128 atgattagcatttttattgttattagatgataaaatatgaataatactgtatgtgtaact 69
Query: 109 atttttt--tnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggac 166
||||||| |||||||||||||||||||| | ||||||| |||||||||||
Sbjct: 68 attttttaaaagtttattttcataaaattttcaaataagatggacggttaaacgttggac 9
Query: 167 acggat 172
||||||
Sbjct: 8 acggat 3
>RF01062;MIR812;AP003054.2/131935-131763 39947:Oryza sativa Japonica
Group
Length = 173
Score = 93.7 bits (47), Expect = 8e-19
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 126 atgattagtatttttattgttattagatgataaaatatgaatagtactttatgcgtgact 67
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacac 168
|||| |||||||| ||||||||||| | |||| |||||||||||| |||
Sbjct: 66 taacttttcaatttttttcataaatttttcaaataagatggacagtcaaacgttgggcac 7
Query: 169 gga 171
|||
Sbjct: 6 gga 4
>RF01062;MIR812;AL731763.1/85403-85574 4530:Oryza sativa (rice)
Length = 172
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||| |||||||| | |||||| ||||||
Sbjct: 128 atgattagtatttttattgttattagatgataaaatatgaatagtattttatgcgtgact 69
Query: 109 atttttt 115
|||||||
Sbjct: 68 atttttt 62
>RF01062;MIR812;AAAA02015747.1/13525-13343 39946:Oryza sativa Indica
Group
Length = 183
Score = 93.7 bits (47), Expect = 8e-19
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| ||||| |||| || |||||||||||||||| ||||||| |||||
Sbjct: 183 ctattcatgtccaatgtttgactgttcgtcttatttgaaaactttttatgattaatattt 124
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgt 104
| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123 t-attgttattagatgataaaacatgaatagtactttatgtgt 82
>RF01062;MIR812;AP005647.3/68598-68772 39947:Oryza sativa Japonica
Group
Length = 175
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgacta 109
||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 126 gattaatatttttattgttattagatgataaaacatgaatagtactctatgtgtgacta 68
>RF01062;MIR812;AP008207.1/8590742-8590913 39947:Oryza sativa
Japonica Group
Length = 172
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| |||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 124 atgattagtatttttgttgttattagatgataaaacataaatactactttatgtgtgact 65
Query: 109 atttttt 115
|||||||
Sbjct: 64 atttttt 58
>RF01062;MIR812;AP008210.1/20754189-20754014 39947:Oryza sativa
Japonica Group
Length = 176
Score = 93.7 bits (47), Expect = 8e-19
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 22 accgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagatgataa 81
||||||||||||||||||| |||| || ||||||| || ||||||||||||||
Sbjct: 156 accgttcgtcttatttgaaaattttaaatgagtattattttttttattattagatgataa 97
Query: 82 aacatgaatagaactttatgtgtgactattttttt 116
||||||||||| |||||||||||||||| ||||||
Sbjct: 96 aacatgaatagtactttatgtgtgactaatttttt 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 129 taaaattttcaaataaaacggacggtcaaa 158
|||||||||||||||| ||| |||||||||
Sbjct: 131 taaaattttcaaataagacgaacggtcaaa 160
>RF01062;MIR812;AACV01022718.1/12342-12516 39947:Oryza sativa
Japonica Group
Length = 175
Score = 93.7 bits (47), Expect = 8e-19
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 11 tccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgtta 70
|||||||||| ||||| ||||||||||||| ||||||| ||||| ||||||||
Sbjct: 166 tccaacgtttgaccgtccgtcttatttgaaattttttaatgattagtatttatattgtta 107
Query: 71 ttagatgataaaacatgaatagaactttatg 101
|||||||||||||||||||||| ||||||||
Sbjct: 106 ttagatgataaaacatgaatagtactttatg 76
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttggacac 168
|||| |||||||||| |||||||||||||||||||||||
Sbjct: 131 aaaaatttcaaataagacggacggtcaaacgttggacac 169
>RF01062;MIR812;AP008208.1/19948735-19948578 39947:Oryza sativa
Japonica Group
Length = 158
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 114 atgattagaatttttattgttattagatgataaaacatgaatagtactttatatgtgact 55
Query: 109 atttttt 115
||||||
Sbjct: 54 ttttttt 48
>RF01062;MIR812;AP003931.3/11982-12155 39947:Oryza sativa Japonica
Group
Length = 174
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 126 atgattagtatttatattgttattagatgataaaacatgaataatactttatatgtgact 67
Query: 109 atttttt 115
|||||||
Sbjct: 66 atttttt 60
>RF01062;MIR812;AAAA02035656.1/8606-8433 39946:Oryza sativa Indica
Group
Length = 174
Score = 93.7 bits (47), Expect = 8e-19
Identities = 96/115 (83%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| |||||||||| | |||||||||||||||| ||||||| ||||
Sbjct: 174 ctattcatgtccaacgtttgatcgttcgtcttatttgattttcttttatgattagaattt 115
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||
Sbjct: 114 ttattgttattagataataaaacatgaatagtactttatgtgcaactaatttttt 60
>RF01062;MIR812;AACV01008001.1/8436-8599 39947:Oryza sativa Japonica
Group
Length = 164
Score = 93.7 bits (47), Expect = 8e-19
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 119 attagtatttttattactattagatgataaaacataaatagtactttatgtgtgactaaa 60
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
| ||| |||| ||||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 59 tatttttaaatttttcacaaaattttcaaataagacgaacggtcaaacgttgggcacgg 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 ccaacgtttcaccgttcgtcttatttgaa 40
||||||||| |||||||||||||||||||
Sbjct: 7 ccaacgtttgaccgttcgtcttatttgaa 35
>RF01062;MIR812;AP003517.3/28178-28350 39947:Oryza sativa Japonica
Group
Length = 173
Score = 93.7 bits (47), Expect = 8e-19
Identities = 121/151 (80%)
Strand = Plus / Minus
Query: 14 aacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatta 73
||||||| |||||||||||| |||||| ||||||| ||||||||||| |||||
Sbjct: 161 aacgtttgaccgttcgtcttgtttgaaatttttttatgattagtatttttattgctatta 102
Query: 74 gatgataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaa 133
|| |||||||||||||| |||||||||||||||| | ||| || |||||
Sbjct: 101 aataataaaacatgaataatactttatgtgtgactaaatatttttaaattttttataaat 42
Query: 134 ttttcaaataaaacggacggtcaaacgttgg 164
||||||||||||||||||||||||| |||||
Sbjct: 41 ttttcaaataaaacggacggtcaaatgttgg 11
>RF01062;MIR812;AP005637.2/72719-72884 39947:Oryza sativa Japonica
Group
Length = 166
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||||||||||| |||||||||||||||||||||| |||||||| ||||||||| || ||
Sbjct: 119 atgattactattgttattgttattagatgataaaatatgaatagtactttatgtatgcct 60
Query: 109 atttttt 115
|||||||
Sbjct: 59 atttttt 53
>RF01062;MIR812;AACV01007421.1/4710-4538 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 125 attaatatttctattgttattagatgataaaatatgaatagtactttatgtgtgactatt 66
Query: 112 tt 113
||
Sbjct: 65 tt 64
>RF01062;MIR812;AC137071.3/81351-81514 39947:Oryza sativa Japonica
Group
Length = 164
Score = 91.7 bits (46), Expect = 3e-18
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 17 gtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagat 76
|||| ||||||||||||||||||| ||||||| ||||||||||| ||||||||
Sbjct: 149 gtttgaccgttcgtcttatttgaaattttgttatgattagtatttttattgctattagat 90
Query: 77 gataaaacatgaatagaactttatgtgtga 106
||||||||||||||| |||||||||||||
Sbjct: 89 gataaaacatgaataatactttatgtgtga 60
>RF01062;MIR812;AACV01018481.1/5092-5262 39947:Oryza sativa Japonica
Group
Length = 171
Score = 91.7 bits (46), Expect = 3e-18
Identities = 97/115 (84%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 60 ttttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnn 119
|||| |||| |||||||||||||| ||||||| ||||||||||| ||| |||||||
Sbjct: 113 ttttgttgtcattagatgataaaatatgaataatactttatgtgttactttttttttgtt 54
Query: 120 nnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacggattt 174
||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 53 ttt--ttcataattttttcaaataagacggacggtcaaacgttggacacggattt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccaacgtttcaccgttcgtcttatttgaa 40
|||||||||| ||||| |||||||||||||
Sbjct: 10 tccaacgtttgaccgtccgtcttatttgaa 39
>RF01062;MIR812;AP004023.3/2827-2655 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| |||||||||||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct: 125 gattaatatttttattgttattagatgataaaacataaatagtattttatgtgtgactaa 66
Query: 111 tttttt 116
||||||
Sbjct: 65 tttttt 60
>RF01062;MIR812;AP008207.1/2168797-2168971 39947:Oryza sativa
Japonica Group
Length = 175
Score = 91.7 bits (46), Expect = 3e-18
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 17 gtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttattagat 76
|||||| ||||||||||||||||| ||||||| |||| ||||| |||||||||
Sbjct: 160 gtttcatcgttcgtcttatttgaaaaataattatgattagtattattattattattagat 101
Query: 77 gataaaacatgaatagaactttatgtgtgactatttttttnnnnnnnnttcataaaattt 136
||||| ||||||||| |||||||||||||||| | |||| ||||||||||||
Sbjct: 100 gataatgcatgaatagtactttatgtgtgactaatatttttaatttttttcataaaattt 41
Query: 137 tcaaataaaacggacggtcaaa 158
| |||||| ||||||| |||||
Sbjct: 40 ttaaataagacggacgctcaaa 19
>RF01062;MIR812;AAAA02024272.1/5696-5524 39946:Oryza sativa Indica
Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| |||||||||||||||| |||||||||||||| ||| ||||||||| |||||
Sbjct: 127 atgattagcatttttattgttattacatgataaaacatgagtagtactttatgtatgact 68
Query: 109 atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaa 158
|||||||| |||||||| ||||||||||| ||| | |||||||
Sbjct: 67 atttttttttaattttttcataaatttttcaaataatacgaatggtcaaa 18
>RF01062;MIR812;AY946572.1/35-209 4530:Oryza sativa (rice)
Length = 175
Score = 91.7 bits (46), Expect = 3e-18
Identities = 104/125 (83%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||||
Sbjct: 128 atgattagtatttttattgttattagatgataaaacatgaaaaatactttacatgtgact 69
Query: 109 attt--ttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggac 166
|||| |||| |||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 68 atttttttttccaatttgttcataaatttttcaaataagacggataatcaaacgttggac 9
Query: 167 acgga 171
|||||
Sbjct: 8 acgga 4
>RF01062;MIR812;AAAA02002613.1/4946-4777 39946:Oryza sativa Indica
Group
Length = 170
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 57 tatttttattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
|||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||
Sbjct: 115 tatttttattgttattagatgataaaacatgagtagtacttgttgtgtgactattttttt 56
Query: 117 nnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggaca 167
|||||||| |||| |||||| | ||||||||||||||| ||||
Sbjct: 55 ---aatttttcataaattttttaaataagatggacggtcaaacgttagaca 8
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggacacgga 171
|||| |||||| | ||||||||||||||||||||||||
Sbjct: 130 tttttaaataagatggacggtcaaacgttggacacgga 167
>RF01062;MIR812;AP008207.1/11558080-11557909 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 86/102 (84%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttttattgttatt 72
|||||||| |||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 161 caacgtttaaccgttcgtcttattttaaaatattttatgattagtatttttattgttatt 102
Query: 73 agatgataaaacatgaatagaactttatgtgtgactattttt 114
|||||||||||||| ||||| | ||||||||| |||| ||||
Sbjct: 101 agatgataaaacattaatagtattttatgtgtaactaatttt 60
>RF01062;MIR812;AAAA02027581.1/1070-897 39946:Oryza sativa Indica
Group
Length = 174
Score = 91.7 bits (46), Expect = 3e-18
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 13 caacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattttt-attgttat 71
|||||||| ||||||||||||||||||| ||||||| ||||||| |||| |||
Sbjct: 163 caacgtttgaccgttcgtcttatttgaaaattttttatgattagtattttttattgctat 104
Query: 72 tagatgataaaacatgaatagaactttatgtgtgacta 109
|||||||||||| |||||||| ||||||||||||||||
Sbjct: 103 tagatgataaaatatgaatagtactttatgtgtgacta 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 130 aaaattttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||| ||||||||||||||
Sbjct: 130 aaaattttcaaataagacgaacggtcaaacgttg 163
>RF01062;MIR812;AAAA02030930.1/2297-2465 39946:Oryza sativa Indica
Group
Length = 169
Score = 89.7 bits (45), Expect = 1e-17
Identities = 100/121 (82%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 123 attaatatttttattgctattagatgataaaacataaatagtactttatgtgtgactaaa 64
Query: 112 tttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgga 171
| ||| |||| ||| ||| ||||||| |||||||||||||||||| ||||||
Sbjct: 63 tatttttaaatttttcacaaattttacaaataagacggacggtcaaacgttgagcacgga 4
Query: 172 t 172
|
Sbjct: 3 t 3
>RF01062;MIR812;AAAA02027536.1/9526-9700 39946:Oryza sativa Indica
Group
Length = 175
Score = 89.7 bits (45), Expect = 1e-17
Identities = 104/124 (83%), Gaps = 3/124 (2%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgat-aaaacatgaatagaactttatgtgtgactat 110
||||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 122 attactatttttattattattagatgataaaaacatgaataatactttatgtatgactag 63
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggacacgg 170
|||||| |||||||| |||||||||||||| ||||| |||| || |||||||
Sbjct: 62 tttttttaaaaattttcataaa--tttcaaataaaacgaacggttaaacattagacacgg 5
Query: 171 attt 174
||||
Sbjct: 4 attt 1
>RF01062;MIR812;AAAA02018371.1/438-593 39946:Oryza sativa Indica
Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
Sbjct: 112 attagtatttttattgttattagatgataaaatataaatagtactttatgtgtgactaat 53
Query: 112 ttttt 116
|||||
Sbjct: 52 ttttt 48
>RF01062;MIR812;AP008208.1/30108756-30108928 39947:Oryza sativa
Japonica Group
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 104/125 (83%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||| ||||||||||||||| ||||||| |||||||
Sbjct: 127 atgattagtatttttattgctattagataataaaacatgaatagtactttatatgtgact 68
Query: 109 -atttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttggaca 167
|||||||| ||||||| ||||||||||| | ||| ||| ||| ||||||||
Sbjct: 67 aatttttttttaattttttcataattttttcaaataagatggatggttaaaggttggaca 8
Query: 168 cggat 172
|||||
Sbjct: 7 cggat 3
>RF01062;MIR812;AL732646.5/54257-54086 4530:Oryza sativa (rice)
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 51 gattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactat 110
||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 124 gattaatatttttattgttactagatgataaaacatgaataatactttatgtgtgactaa 65
Query: 111 ttttttnnnnnnnnttcataaaattttcaaataaaacggacggtcaaacgttg 163
|||| |||||||| ||| |||||| ||||||||||||||||||
Sbjct: 64 cttttaaaatttttttcataaatgttttaaataagacggacggtcaaacgttg 12
>RF01062;MIR812;AAAA02025509.1/34942-34776 39946:Oryza sativa Indica
Group
Length = 167
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 120 atgattagtatttttgttgttattagacgataaaacatgaatagtactttatgtgtgact 61
Query: 109 atttt 113
||||
Sbjct: 60 ttttt 56
>RF01062;MIR812;AP004397.3/30264-30415 39947:Oryza sativa Japonica
Group
Length = 152
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgactatt 111
|||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 105 attagtatttttgttgttattagatgataaaacataaatagtactttatgtgtgattatt 46
Query: 112 ttttt 116
|||||
Sbjct: 45 ttttt 41
>RF01062;MIR812;AP004698.3/118419-118581 39947:Oryza sativa Japonica
Group
Length = 163
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 52 attactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
|||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 114 attaatatttttattgttattagatgataaaacatgaatagaaatttatgcgtgact 58
>RF01062;MIR812;AACV01019002.1/7055-6886 39947:Oryza sativa Japonica
Group
Length = 170
Score = 89.7 bits (45), Expect = 1e-17
Identities = 128/161 (79%)
Strand = Plus / Minus
Query: 2 ctattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactattt 61
|||||||| | |||||||| ||||||||| ||||||||| ||||||| |||||
Sbjct: 170 ctattcatgttcaacgtttgaccgttcgttttatttgaaaaatttttatgattagtattt 111
Query: 62 ttattgttattagatgataaaacatgaatagaactttatgtgtgactatttttttnnnnn 121
|||||||||||||| |||||||| | ||||| | |||||||||||||| | |||
Sbjct: 110 ttattgttattagaagataaaacgtaaatagtattttatgtgtgactaaatattttcaaa 51
Query: 122 nnnttcataaaattttcaaataaaacggacggtcaaacgtt 162
||||||| |||| |||||| |||||||||||||||||
Sbjct: 50 tttttcataatttttttaaataagacggacggtcaaacgtt 10
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||
Sbjct: 130 ttttcaaataaaacgaacggtcaaacgttg 159
>RF01062;MIR812;AP004687.2/30998-30841 39947:Oryza sativa Japonica
Group
Length = 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 49 atgattactatttttattgttattagatgataaaacatgaatagaactttatgtgtgact 108
||||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 114 atgattagtatttttattgctattagatgataaaacatgaatagtactttgtgtgtgact 55
Query: 109 a 109
|
Sbjct: 54 a 54
>RF01062;MIR812;AP005775.3/45090-44916 39947:Oryza sativa Japonica
Group
Length = 175
Score = 89.7 bits (45), Expect = 1e-17
Identities = 95/113 (84%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 5 ttcatatccaacgtttcaccgttcgtcttatttgaannnnnnnn-atgattactattttt 63
||||| |||||||||| ||||||||||||||||||| ||||||| |||||||
Sbjct: 172 ttcatgtccaacgtttgaccgttcgtcttatttgaaaaaaagattatgattagtattttt 113
Query: 64 attgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||| ||| |||||||||||| |||||||| |||||| ||||||||| ||||||
Sbjct: 112 attattactagatgataaaatatgaatagtactttacgtgtgactaatttttt 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttggaca 167
||||||||||| ||| ||||||||||||||||||
Sbjct: 135 ttttcaaataagacgaacggtcaaacgttggaca 168
>RF01062;MIR812;AAAA02006750.1/35180-35357 39946:Oryza sativa Indica
Group
Length = 178
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/114 (84%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 3 tattcatatccaacgtttcaccgttcgtcttatttgaannnnnnnnatgattactatttt 62
||||||| | |||||||| ||||||||| ||||||||| ||||||| ||||||
Sbjct: 177 tattcatgttcaacgtttgaccgttcgttttatttgaaaaaaatt-atgattagtatttt 119
Query: 63 tattgttattagatgataaaacatgaatagaactttatgtgtgactattttttt 116
||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||
Sbjct: 118 tattgctattagatgataaaacataaatagtattttatgtgtgactatcttttt 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 134 ttttcaaataaaacggacggtcaaacgttg 163
||||||||||||||| ||||||||||||||
Sbjct: 138 ttttcaaataaaacgaacggtcaaacgttg 167
