miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00778;MIR473;ABEU01011565.1/20254-20339 145481:Physcomitrella
patens subsp. patens
Length = 86
Score = 168 bits (85), Expect = 7e-42
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 gttgctttttcctctccctcaaaggcttccaacatgatgtgcgtaagccacaacgttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgctttttcctctccctcaaaggcttccaacatgatgtgcgtaagccacaacgttaga 60
Query: 61 agcctttgtgggagaggaagaaaca 85
|||||||||||||||||||||||||
Sbjct: 61 agcctttgtgggagaggaagaaaca 85
>RF00778;MIR473;ABEU01009332.1/18900-19015 145481:Physcomitrella
patens subsp. patens
Length = 116
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 2 ttgctttttcctctccctcaaaggcttccaaca 34
|||||| ||||||||||||||||||||||||||
Sbjct: 2 ttgcttgttcctctccctcaaaggcttccaaca 34
>RF00778;MIR473;ABEU01001451.1/57637-57555 145481:Physcomitrella
patens subsp. patens
Length = 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ctctccctcaaaggcttccaacat 35
||||||||||||||||||||||||
Sbjct: 12 ctctccctcaaaggcttccaacat 35
>RF00780;MIR477;AASG02000511.1/21598-21512 3988:Ricinus communis
(castor bean)
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tctccctcaaaggcttccaacat 35
|||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaacat 34
>RF00780;MIR477;ABEU01012303.1/7387-7514 145481:Physcomitrella
patens subsp. patens
Length = 128
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tctccctcaaaggcttccaaca 34
||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaaca 33
>RF00780;MIR477;ABEU01011353.1/22038-21912 145481:Physcomitrella
patens subsp. patens
Length = 127
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tctccctcaaaggcttccaaca 34
||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaaca 33
