miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00778;MIR473;ABEU01009332.1/18900-19015 145481:Physcomitrella
patens subsp. patens
Length = 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 25 tgcttgatcctctccctcaaaggcttccaaca 56
|||||| |||||||||||||||||||||||||
Sbjct: 3 tgcttgttcctctccctcaaaggcttccaaca 34
>RF00778;MIR473;ABEU01011565.1/20254-20339 145481:Physcomitrella
patens subsp. patens
Length = 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 32 tcctctccctcaaaggcttccaaca 56
|||||||||||||||||||||||||
Sbjct: 10 tcctctccctcaaaggcttccaaca 34
>RF00778;MIR473;ABEU01001451.1/57637-57555 145481:Physcomitrella
patens subsp. patens
Length = 83
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 34 ctctccctcaaaggcttccaaca 56
|||||||||||||||||||||||
Sbjct: 12 ctctccctcaaaggcttccaaca 34
>RF00780;MIR477;AASG02000511.1/21598-21512 3988:Ricinus communis
(castor bean)
Length = 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tctccctcaaaggcttccaaca 56
||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaaca 33
>RF00780;MIR477;ABEU01012303.1/7387-7514 145481:Physcomitrella
patens subsp. patens
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tctccctcaaaggcttccaaca 56
||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaaca 33
>RF00780;MIR477;ABEU01011353.1/22038-21912 145481:Physcomitrella
patens subsp. patens
Length = 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tctccctcaaaggcttccaaca 56
||||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaaca 33
