miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01014391.1/4590-4745 39947:Oryza sativa
Japonica Group
Length = 156
Score = 143 bits (72), Expect = 6e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 30 attccctagtataacgaaatttaggcaaccttctgttcagattcgttgtattaggaaata 89
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 107 attccctagtataacgaa-tctaggcaaccttctgttcagattcgttgtattaggaaata 49
Query: 90 tcncctccaatagtaggttgatttttt 116
|| ||||||||||||||||||||||||
Sbjct: 48 tcacctccaatagtaggttgatttttt 22
>RF00906;MIR1122;AL713943.3/124714-124851 4530:Oryza sativa (rice)
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 63 tgttcagattcgttgtattagga 85
|||||||||||||||||||||||
Sbjct: 76 tgttcagattcgttgtattagga 54
>RF00906;MIR1122;AP008218.1/21039366-21039229 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tgttcagattcgttgtattagga 85
|||||||||||||||||||||||
Sbjct: 63 tgttcagattcgttgtattagga 85
