miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa Indica
Group
Length = 243
Score = 103 bits (52), Expect = 1e-21
Identities = 67/71 (94%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 70 aataagccgagtggtcaaacgttgcaagcaaaaactc--aaaatctcttatattgtggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 172 ataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtgggac 231
||||||||||||||||||| ||||| ||||||| ||||||||| ||| |||||||||||
Sbjct: 175 ataagacgagtggtcaaacattgtacgcaaaaa--ctcaaaatcccttgtattgtgggac 232
Query: 232 ggagggagtac 242
|||||||||||
Sbjct: 233 ggagggagtac 243
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||||||| ||||||||||||||| ||||||
Sbjct: 3 actccctccgtcccacaatataagagattttgagtttt 40
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 103 bits (52), Expect = 1e-21
Identities = 67/71 (94%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||
Sbjct: 173 aataagacgagtggtcaaacgttgtaagcgaaaa--ctcaaaatcccttatattgtggga 230
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 231 cggagggagta 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 64/71 (90%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||| ||||||| ||||||||| ||||||||||||| |||||| |||||||| |||||
Sbjct: 69 aataaaacgagtg-tcaaacgttataagcaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa Japonica
Group
Length = 241
Score = 97.6 bits (49), Expect = 7e-20
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||
Sbjct: 172 aataagacgagtggtcaaacgttgcaaacaaaaactc--aaaatcccttatattgtggga 229
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 230 cggagggagtac 241
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||| |||||||||||||||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 70 aataaaacgagtggtcaaacgttgcaagcaaaaa--ctcaaaatcccttatattatggga 13
Query: 231 cggagggagt 240
||||||||||
Sbjct: 12 cggagggagt 3
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||
Sbjct: 171 ttaaataagacaagtggtcaaacgttgcaagcaaaaa--ctgaaaatcccttatattgtg 228
Query: 228 ggacggagggagtac 242
|||||||||||||||
Sbjct: 229 ggacggagggagtac 243
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacgttgcaagcaaaaa--ctcaaaatcccttatattatggga 13
Query: 231 cggagggagta 241
||| |||||||
Sbjct: 12 cggggggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 22 ccgtcccataatataagagattttaagtttt 52
||||||||||||||||| |||||| ||||||
Sbjct: 10 ccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||
Sbjct: 73 ttaaataagacaagtggtcaaacgttgcaagcaaaaa--ctgaaaatcccttatattgtg 16
Query: 228 ggacggagggagtac 242
|||||||||||||||
Sbjct: 15 ggacggagggagtac 1
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/71 (92%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 174 aataagacgagtggtcaaacgttgcaagcaaaaa--ctcaaaatcccttatattatggga 231
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 232 cggagggagta 242
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 241 actccctccgtcccataatataagggattttgagtttt 204
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/71 (92%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||
Sbjct: 172 aataagacgagtggtcaaatgttgcaagcaaaaactc--aaaatcccttatattgtggga 229
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 230 cggagggagta 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||||||||||||| ||| || |||||| ||||||||| |||||||| ||
Sbjct: 73 ttaaataagacgagtggtcaaacattgcaaacaaaaa--ctcaaaatcccttatattatg 16
Query: 228 ggacggagggagta 241
||| ||||||||||
Sbjct: 15 ggatggagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagttttcatttgcaaatatttgatcact 74
||||| ||| |||||||||||||| |||||| |||||| ||||| ||| ||||| ||||
Sbjct: 3 actccctccatcccataatataagggattttgagtttttgtttgc-aatgtttgaccact 61
Query: 75 cgttttatt 83
||| |||||
Sbjct: 62 cgtcttatt 70
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/72 (91%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||
Sbjct: 175 aataagacgagtggtcaaacgttgcaagtaaaaactg--aaaatcccttatattgtggga 232
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 233 cggagggagtac 244
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||| ||||||| |||||||| ||||||||| |||||||| |||||
Sbjct: 70 aataagacgagtggttaaacgttacgagcaaaaa--ctcaaaatcccttatattatggga 13
Query: 231 cggagggagta 241
||||| |||||
Sbjct: 12 cggagagagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 21 tccgtcccataatataagagattttaagtttt 52
|||||||||||||||||| |||||| ||||||
Sbjct: 9 tccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa Indica
Group
Length = 242
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacgttacaagcaaaaa--ctcaaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||||| ||||||||| || |||||| ||||||||||||||
Sbjct: 173 aataagacgagtggtcaaacgttacaagcaaaaa--ctgaaaatcccttatattgtggga 230
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 231 cggagggagta 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa Indica
Group
Length = 242
Score = 87.7 bits (44), Expect = 7e-17
Identities = 67/74 (90%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||||||||||||||||||||| |||| || |||||| | |||||||||
Sbjct: 171 ttaaataagacgagtggtcaaacgttgtaagtaaaa---cttaaaatcccctatattgtg 227
Query: 228 ggacggagggagta 241
||||||||||||||
Sbjct: 228 ggacggagggagta 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| |||| |||| ||||||||| |||||||| || ||
Sbjct: 70 aataagacgagtggtcaaacgttggaagcgaaaa--ctcaaaatcccttatattatgaga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagttttc 53
||||| |||||| ||||||||||| |||||| |||||||
Sbjct: 3 actccctccgtctcataatataagggattttgagttttc 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||||||| |||||| | |||||||||||||
Sbjct: 240 actccctccgtcccacaatataggggattttaagtttt 203
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacattgcaagcaaaaa--ctcaaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||| ||| |||| |||||||||||| |||||| ||||||||||||||
Sbjct: 175 aataagacgagtggttaaatgttgcaagcaaaaactc--aaaatcccttatattgtggga 232
Query: 231 cggagggagta 241
|||| ||||||
Sbjct: 233 cggaaggagta 243
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||
Sbjct: 172 aataagacgagtggtcaaacactgtaagcaaaaa--ctcaaaatcccttatattatggga 229
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 230 cggagggagta 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||| |||||||||||| |||||||||||| || |||||| |||||||| ||
Sbjct: 73 ttaaataagatgagtggtcaaacactgtaagcaaaaa--cttaaaatcccttatattatg 16
Query: 228 ggacggagggagta 241
||||||||||||||
Sbjct: 15 ggacggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttaagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 239 actccctccgtcccataatataagggattttgagtttt 202
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| ||||||||| ||||||| | || |||||||||||
Sbjct: 174 aataagacgagtggtcaaacgttgcaagcaaaaa--ctcaaaagccctcatattgtggga 231
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 232 cggagggagta 242
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||||| |||||||||| ||||||||| ||||||||| | |||||| ||
Sbjct: 73 ttaaataagacgagtagtcaaacgttacaagcaaaaa--ctcaaaatcccctatattatg 16
Query: 228 ggacggagggagtac 242
|||||||||||||||
Sbjct: 15 ggacggagggagtac 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||| | |||||| ||||||
Sbjct: 3 actccctccgtcccataatataggggattttgagtttt 40
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa Indica
Group
Length = 242
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacgttccaagcaaaaa--ctcaaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||| |||||||||||||||| ||||| | || |||||| ||||||||||||||
Sbjct: 173 aataagatgagtggtcaaacgttgcaagcagtagctt--aaaatcccttatattgtggga 230
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 231 cggagggagtac 242
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||
Sbjct: 173 aataagacgagtggtcaaacgttgcaatcaaaaa--ctcaaaatcccttatattttggga 230
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 231 cggagggagta 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||| || || |||||| ||||||||| |||||||| |||||
Sbjct: 69 aataagacgagtggtcaaacgctgcaaacaaaaa--ctcaaaatcccttatattatggga 12
Query: 231 cggagggagta 241
| |||||||||
Sbjct: 11 c-gagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 23 cgtcccataatataagagattttaagtttt 52
|||||||||||||||| |||||| ||||||
Sbjct: 10 cgtcccataatataagggattttgagtttt 39
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 175 aataagacgaatggtcaaacgttgcaagcaaaaa--ctcaaaatcccttatattatggga 232
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 233 cggagggagta 243
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || |||||||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacattacaagcaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 242 actccctccgtcccataatataagggattttgagtttt 205
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa Indica
Group
Length = 134
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| ||||||||| ||||||||| |||||||| || ||
Sbjct: 73 aataagacgagtggtcaaacgttgcaagcaaaaa--ctcaaaatcacttatattatgaga 16
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 182 tggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtgggacggagggagta 241
||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 73 tggtcaaacgttgcaagtaaaaactc--aaaatcccttatattgtgggacggagggagta 130
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||| ||||||||||| |||||| ||||||
Sbjct: 6 actccctccgtctcataatataagtgattttgagtttt 43
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 85.7 bits (43), Expect = 3e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||
Sbjct: 171 aataagacgagtggtcaagcgttacaagcaaaaactca-aaaatcccttatattgtggga 229
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 230 cggagggagta 240
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||| ||||||||||| ||| |||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtagtcaaacgttgcaagtaaaaactc--aaaatcccttatattctggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 81.8 bits (41), Expect = 4e-15
Identities = 66/72 (91%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctctt-atattgtggg 229
|||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||| ||||
Sbjct: 71 aataagacgagtggtcaaacgttgcaagcaaaaa--ctcaaaatcccttaatattatggg 14
Query: 230 acggagggagta 241
||||||||||||
Sbjct: 13 acggagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/72 (90%), Gaps = 4/72 (5%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||||||| ||| ||||| ||||||||| || ||||||||||
Sbjct: 175 aataagacgagtggtcaaacgttgcaagaaaaaa--ctcaaaatccct--tattgtggga 230
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 231 cggagggagtac 242
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| |||||||||||||| |||||| |||||||| |||||
Sbjct: 171 aataagacgagtggtcaaacaaagtaagcaaaaactc--aaaatcccttatattatggga 228
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 229 cggagggagtac 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||| ||||||||||||| || ||||||||| ||| ||||| |||||||| |||||
Sbjct: 70 aataagatgagtggtcaaacggtgcaagcaaaaa--ctccaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||| ||||||
Sbjct: 12 cggatggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattt 44
|||||||||||||||||||||||| |||||
Sbjct: 3 actccatccgtcccataatataagggattt 32
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 238 actccctccgtcccataatataagggattttgagtttt 201
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||||| ||| |||||| | |||||| ||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacgttacaagtaaaaaccc--aaaatcccttatattgtggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||| | ||| |||||||| |||||| |||||||| |||||
Sbjct: 169 aataagacgagtggtcaaacgatacaagtaaaaactc--aaaatcccttatattatggga 226
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 227 cggagggagta 237
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 236 actccctccgtcccataatataagggattttgagtttt 199
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacgttataaagaaaaactc--aaaatctcttatattatggga 13
Query: 231 cggagggagta 241
|||||| ||||
Sbjct: 12 cggaggaagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||| ||||||||||| || |||||||| |||||| |||||||| |||||
Sbjct: 169 aataagacgagtagtcaaacgttgcaatgaaaaactc--aaaatcccttatattatggga 226
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 227 cggagggagta 237
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 21 tccgtcccataatataagagattttaagtttt 52
||||||||||||||||||||||||| ||||||
Sbjct: 9 tccgtcccataatataagagattttgagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 236 actccctccgtcccataatataagggattttgagtttt 199
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||||| ||| |||||| | |||||| ||||||||||||||
Sbjct: 169 aataagacgagtggtcaaacgttacaagtaaaaaccc--aaaatcccttatattgtggga 226
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 227 cggagggagta 237
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||||| | ||| |||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacgatacaagtaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||||||||||||| | |||||||||||| |||||| |||||||||||
Sbjct: 73 ttaaataagacgagtggtcaaacactacaagcaaaaactc--aaaatcccttatattgtg 16
Query: 228 ggacggagggagta 241
|||| |||||||||
Sbjct: 15 ggacagagggagta 2
>RF00906;MIR1122;AL731617.3/71366-71211 39947:Oryza sativa Japonica
Group
Length = 156
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||||||||||||||||||| || |||||| ||||||| |||||||||||
Sbjct: 81 ttaaataagacgagtggtcaaacgttacaaacaaaaa--atcaaaattccttatattgtg 138
Query: 228 ggacggagggagta 241
||||||||||||||
Sbjct: 139 ggacggagggagta 152
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||| ||||||||||||||| || |||||| || |||||| |||||||| ||
Sbjct: 76 ttaaataagatgagtggtcaaacgttacaaacaaaaa--cttaaaatcccttatattatg 19
Query: 228 ggacggagggagta 241
||||| ||||||||
Sbjct: 18 ggacgaagggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 23 cgtcccataatataagagattttaagtttt 52
|||||||||||||||| |||||||||||||
Sbjct: 14 cgtcccataatataagggattttaagtttt 43
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | ||| ||||||||| |||||| |||||||| |||||
Sbjct: 175 aataagacgagtggtcaaacaatctaaacaaaaactc--aaaatcccttatattatggga 232
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 233 cggagggagtac 244
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||||||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacaatacaagcaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 242 actccctccgtcccataatataagggattttgagtttt 205
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||
Sbjct: 167 aataagacgagtggtcaaagtgtgtaagcaaaaa--ctcaaaatcccttatattatggga 224
Query: 231 cggagggagta 241
|| ||||||||
Sbjct: 225 cgtagggagta 235
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||| ||||||| || || ||||||||| |||||| |||||||| ||| |
Sbjct: 70 aataagacgagtagtcaaacagtgcaaacaaaaactc--aaaatcccttatattatggaa 13
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 12 cggagggagtac 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||| |||||||||||| |||||| ||||||
Sbjct: 3 actccctccgttccataatataagggattttgagtttt 40
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 23 cgtcccataatataagagattttaagtttt 52
|||||||||||||||| |||||| ||||||
Sbjct: 226 cgtcccataatataagggattttgagtttt 197
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||||||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacagtacaagcaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||||
Sbjct: 170 aataagacgagtggtcaaacagtacaaggaaaaactc--aaaatctcttatattatggga 227
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 228 cggagggagta 238
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||||||||||||||||||||||| ||||||
Sbjct: 237 actccctccgtcccataatataagagattttgagtttt 200
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01058;MIR806;AC097368.3/118507-118267 39947:Oryza sativa Japonica
Group
Length = 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| |||||||||||| || ||||||||||||||| |||||
Sbjct: 172 aataagacgagtggtcaaacaatgtaagcaaaaa--cttaaaatctcttatattatggga 229
Query: 231 cgg 233
|||
Sbjct: 230 cgg 232
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||| |||||| || ||| |||||||| ||||||||||||||| | |||
Sbjct: 70 aataagacgagtgatcaaacagtgcaagtaaaaactc--aaaatctcttatattatagga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 22 ccgtcccataatataagagattttaagtttt 52
|||||||||||||||||||||||||||||||
Sbjct: 232 ccgtcccataatataagagattttaagtttt 202
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagttttcatttgcaaatatttgatcact 74
||||| ||||||| ||||||||||||||||| |||||| | |||| | | ||||||||||
Sbjct: 3 actccctccgtcctataatataagagattttgagtttttacttgc-actgtttgatcact 61
Query: 75 cgttttatt 83
||| |||||
Sbjct: 62 cgtcttatt 70
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || || ||||||||| |||||| |||||||| |||||
Sbjct: 172 aataagacgagtggtcaaacagtgcaaacaaaaactc--aaaatcccttatattatggga 229
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 230 cggagggagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||| || || ||||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaatagtgcaaacaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagt 240
||||||||||
Sbjct: 12 cggagggagt 3
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 14 aactccatccgtcccataatataagagattttaagttttcatttgcaaatatttgatcac 73
|||||| |||||||||||||||||| |||||| |||||| ||||| | ||||||| |||
Sbjct: 2 aactccctccgtcccataatataagggattttgagtttttgtttgc-actatttgaccac 60
Query: 74 tcgttttatt 83
|||| |||||
Sbjct: 61 tcgtcttatt 70
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 239 actccctccgtcccataatataagggattttgagtttt 202
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa Indica
Group
Length = 243
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||| |||||||||||| || |||||| |||||||| |||||
Sbjct: 70 aataagacgaatggtcaaacagtgtaagcaaaaagtc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||| ||||||||| |||||| ||||| | |||||| |||||||| ||
Sbjct: 171 ttaaataagacgactggtcaaacagtgtaagtaaaaagtt--aaaatcccttatattatg 228
Query: 228 ggacggagggagta 241
||||||||||||||
Sbjct: 229 ggacggagggagta 242
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||||| ||||
Sbjct: 241 actccctccgtcccataatataagggattttaactttt 204
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggatttt 33
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||| ||||||| || |||||||||||| |||||| |||||||| |||||
Sbjct: 176 aataagacgagtagtcaaacagtgcaagcaaaaactc--aaaatcccttatattatggga 233
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 234 cggagggagta 244
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 16 ctccatccgtcccataatataagagattttaagtttt 52
|||| |||||||||||||||||| |||||||||||||
Sbjct: 4 ctccctccgtcccataatataagggattttaagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 243 actccctccgtcccataatataagggattttgagtttt 206
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 210 aaaatctcttatattgtgggacggagggag 239
|||||| |||||||| ||||||||||||||
Sbjct: 33 aaaatcccttatattatgggacggagggag 4
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacagtacaaggaaaaactc--aaaatctcttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||||||||||| |||||| |||||||| |||||
Sbjct: 170 aataagacgagtggtcaaacagtacaagcaaaaactc--aaaatcccttatattatggga 227
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 228 cggagggagta 238
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||||||||||||||||||||||| ||||||
Sbjct: 3 actccctccgtcccataatataagagattttgagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 237 actccctccgtcccataatataagggattttgagtttt 200
>RF01058;MIR806;AAAA02017486.1/15213-14973 39946:Oryza sativa Indica
Group
Length = 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || ||| |||||||| |||||||||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaagaaaaaactc--aaaatctcttatatcatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 175 agacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtgggacgga 234
|||||||||||||||| || |||||||||||| ||||||||||||||| ||||| |||
Sbjct: 176 agacgagtggtcaaacagtgcaagcaaaaactc--aaaatctcttatattatgggatgga 233
Query: 235 gggagta 241
|||||||
Sbjct: 234 gggagta 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||| |||||||||||||| ||||||
Sbjct: 3 actccctccgtcccatgatataagagattttgagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 239 actccctccatcccataatataagagattttgagtttt 202
>RF01058;MIR806;AACV01026200.1/8692-8927 39947:Oryza sativa Japonica
Group
Length = 236
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| ||||| |||||| ||||||||| |||||||| |||||
Sbjct: 167 aataagacgagtggtcaaacagtgtaaacaaaaa--ctcaaaatcccttatattatggga 224
Query: 231 cggagggagta 241
|||| ||||||
Sbjct: 225 cggatggagta 235
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
|||||||||||||||||||||||| |||||| ||||||
Sbjct: 234 actccatccgtcccataatataagggattttgagtttt 197
Score = 58.0 bits (29), Expect = 6e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagttttcatttgcaaatatttgatcact 74
||||| |||||||||||||||| | |||||| |||||| |||||| | | ||||||||||
Sbjct: 3 actccctccgtcccataatatatgggattttgagtttttatttgc-actctttgatcact 61
Query: 75 cgttttatt 83
||| |||||
Sbjct: 62 cgtcttatt 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 207 ctcaaaatctcttatattgtgggacggagggagta 241
||||||||| | |||||| ||||||||||||||||
Sbjct: 36 ctcaaaatcccatatattatgggacggagggagta 2
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||||||||| |||||| || ||||||||| ||||||||| |||||||| ||
Sbjct: 169 ttaaataagacgagtgatcaaaccgtgcaagcaaaaa--ctcaaaatcccttatattatg 226
Query: 228 ggacggagggagtac 242
||| |||||||||||
Sbjct: 227 ggatggagggagtac 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||||||||||||| | ||||||||| |||||||| |||||||| ||
Sbjct: 73 ttaaataagacgagtggtcaaacaacgcaagcaaaaa--ttcaaaatcccttatattatg 16
Query: 228 ggacggagggagtac 242
||||||| |||||||
Sbjct: 15 ggacggaaggagtac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 3 actccttccgtcccataatataagggatttt 33
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||| |||||||||||||| |||||| ||||||
Sbjct: 239 actccctccatcccataatataagggattttgagtttt 202
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || ||||||||| || |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaagcaaaaagtc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||| ||||||||||| || ||||||| | || |||||| |||||||| |||||
Sbjct: 166 aataagacaagtggtcaaacagtgcaagcaaatagtc--aaaatcccttatattatggga 223
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 224 cggagggagta 234
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggatttt 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 233 actccctccgtcccataatataagggatttt 203
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||| ||||||| || |||||||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtagtcaaaccgtgcaagcaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||||||||||| |||||| |||||||| |||||
Sbjct: 173 aataagacgagtggtcaaacactacaagcaaaaactc--aaaatcccttatattatggga 230
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 231 cggagggagta 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 240 actccctccgtcccataatataagggattttgagtttt 203
>RF01062;MIR812;AAAA02007251.1/7007-6836 39946:Oryza sativa Indica
Group
Length = 172
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||||||||||||
Sbjct: 138 aataagacgagtggtcaaacgttgtaagcaaaaac 172
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||| ||| ||||||| ||||||
Sbjct: 38 ttaaataagacgagtggttaaatattgtaagtaaaaac 1
>RF01062;MIR812;AAAA02011387.1/17306-17134 39946:Oryza sativa Indica
Group
Length = 173
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgtaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||| ||||||| ||| ||||||||||
Sbjct: 139 aataagacgagttgtcaaacattgcaagcaaaaac 173
>RF01062;MIR812;AAAA02011062.1/27832-28005 39946:Oryza sativa Indica
Group
Length = 174
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||||||||||||
Sbjct: 140 aataagacgagtggtcaaacgttgtaagcaaaaac 174
>RF01058;MIR806;AACV01010328.1/26487-26725 39947:Oryza sativa
Japonica Group
Length = 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||||||||||||||| || ||||||||| ||||||||| |||||||| ||
Sbjct: 167 ttaaataagacgagtggtcaaagagtgcaagcaaaaa--ctcaaaatcccttatattatg 224
Query: 228 ggacggagggagta 241
|||||||||||||
Sbjct: 225 agacggagggagta 238
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || || |||||| |||| |||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaaacaaaaa--ctcagaatcccttatattatggga 13
Query: 231 cggagggagta 241
||||||||||
Sbjct: 12 tggagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||| ||||||||||| |||||| ||||||
Sbjct: 237 actccctccgtctcataatataagggattttgagtttt 200
>RF01062;MIR812;AP008215.1/22501411-22501583 39947:Oryza sativa
Japonica Group
Length = 173
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| ||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttgcaagcaaaaac 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| || ||||||||||
Sbjct: 136 ttaaataagacgagtggtcaaactttaaaagcaaaaac 173
>RF01062;MIR812;AACV01012425.1/11928-12097 39947:Oryza sativa
Japonica Group
Length = 170
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| ||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttgcaagcaaaaac 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaa 203
||||||||||||||| |||||||||||| ||||
Sbjct: 136 aataagacgagtggttaaacgttgtaagaaaaa 168
>RF01062;MIR812;AACV01006063.1/27291-27465 39947:Oryza sativa
Japonica Group
Length = 175
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||||||| |||||||
Sbjct: 138 ttaaataagacgagtggtcaaacgttgtaaacaaaaac 175
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||| |||||||| |||||||
Sbjct: 35 aataagacgagtggtcaagcgttgtaaacaaaaac 1
>RF01062;MIR812;AP005807.3/11576-11404 39947:Oryza sativa Japonica
Group
Length = 173
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||||||||| ||||
Sbjct: 136 ttaaataagacgagtggtcaaacgttgtaagcacaaac 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgtt 193
|||||||||||||||||||||||
Sbjct: 35 aataagacgagtggtcaaacgtt 13
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa Indica
Group
Length = 238
Score = 67.9 bits (34), Expect = 7e-11
Identities = 63/72 (87%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || ||| |||| ||||||||| |||||||| |||||
Sbjct: 170 aataagacgagtggtcaaacagtgcaagaaaaa---ctcaaaatcccttatattatggga 226
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 227 cggagggagtac 238
Score = 54.0 bits (27), Expect = 1e-06
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 21 tccgtcccataatataagagattttaagttttcatttgcaaatatttgatcactcgtttt 80
|||||||||||||||||| |||||| |||||| ||||| | | ||||||||||||| ||
Sbjct: 9 tccgtcccataatataagggattttgagtttttgtttgc-actctttgatcactcgtctt 67
Query: 81 att 83
|||
Sbjct: 68 att 70
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 236 actccctccgtcccataatataagggattttgagtttt 199
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||| ||||| || || ||||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtgatcaaagagtgcaaacaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||| ||||
Sbjct: 12 cggaggaagta 2
>RF01062;MIR812;ABRL01000707.1/2129-1958 65489:Oryza barthii
Length = 172
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaa 204
||||||||||||||||||||||||||| |||||||||
Sbjct: 135 ttaaataagacgagtggtcaaacgttgcaagcaaaaa 171
>RF01062;MIR812;AY749282.1/500-327 40149:Oryza meridionalis
Length = 174
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||| ||||||||||||||||||||||||||||
Sbjct: 137 ttaaataaaacgagtggtcaaacgttgtaagcaaaaa 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 174 aagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| ||||||||||
Sbjct: 32 aagacgagtggtcaaacgttacaagcaaaaac 1
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa Japonica
Group
Length = 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || || |||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaaataaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 12 cggagggagtac 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagttttcatttgca 60
||||| |||||||||||||||||| |||||| |||||| |||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttttatttgca 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/74 (83%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||| |||||||||||| || || ||||| ||||||||| |||||||| ||
Sbjct: 170 ttaaataagatgagtggtcaaacaatgcaaataaaaa--ctcaaaatcccttatattatg 227
Query: 228 ggacggagggagta 241
| | ||||||||||
Sbjct: 228 gaatggagggagta 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 27 ccataatataagagattttaagttttcatttgca 60
|||||||||||| |||||| |||||| |||||||
Sbjct: 228 ccataatataagggattttgagtttttatttgca 195
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa Japonica
Group
Length = 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||| || |||||||||||| ||||||| ||||||| || ||
Sbjct: 171 aataagacgaatggtcaaacagtggaagcaaaaactc--aaaatcttttatattatgaga 228
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 229 cggagggagtac 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || ||| ||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaagtaaaaactt--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttaagtttt 40
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/72 (87%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||||||||| ||||||||| |||||||| | ||
Sbjct: 70 aataagacgagtggtcaaacagtataagcaaaaa--ctcaaaatcccttatattattaga 13
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 12 cggagggagtac 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || || |||||| |||||||| |||||||| |||||
Sbjct: 174 aataagacgagtggtcaaacagtgcaaacaaaaa--ctcaaaattccttatattatggga 231
Query: 231 cggagggagta 241
||||| ||||
Sbjct: 232 tggaggaagta 242
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa Indica
Group
Length = 238
Score = 65.9 bits (33), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || || ||||| ||||||||| |||||||| |||||
Sbjct: 69 aataagacgagtggtcaaacagtgcaatcaaaa---ctcaaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
>RF01062;MIR812;AP005098.4/149489-149327 39947:Oryza sativa Japonica
Group
Length = 163
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 170 aaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||| ||||||||||
Sbjct: 36 aaataagacgagtggtcaaacgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||| |||||||||||||| ||||||||||
Sbjct: 129 aataagacaagtggtcaaacgttaaaagcaaaaac 163
>RF01062;MIR812;AP003450.3/144108-144282 39947:Oryza sativa Japonica
Group
Length = 175
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 169 taaataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||||||||||||||||||||| |||||||||
Sbjct: 139 taaataagacgagtggtcaaacgttgcaagcaaaaa 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttg 194
|||||||||||||||||||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttg 12
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica Group
Length = 242
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||| |||||||| |||||| ||||||| |||||
Sbjct: 173 aataagacgagtggtcaaacactataagtaaaaactc--aaaatcctttatattatggga 230
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 231 cggagggagta 241
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 207 ctcaaaatctcttatattgtgggacggagggagta 241
||||||||| |||||||| ||||||||||||||||
Sbjct: 36 ctcaaaatcccttatattatgggacggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||||||||||||||| |||||| ||||||
Sbjct: 240 actccctccgtcccataatataaaggattttgagtttt 203
>RF01058;MIR806;AP003298.3/13500-13742 39947:Oryza sativa Japonica
Group
Length = 243
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| ||| ||||||||| || |||||| |||||||| | ||
Sbjct: 70 aataagacgagtggtcaaacattgcaagcaaaaa--cttaaaatcccttatattataaga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||| ||||||||| ||||||||| || |||||| |||||||| | ||
Sbjct: 174 aataagacgagtgttcaaacgttacaagcaaaaa--cttaaaatcccttatattataaga 231
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 232 cggagggagtac 243
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||| |||||||||| |||||||||||||
Sbjct: 3 actccctccgtcttataatataagggattttaagtttt 40
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||| |||||||||| |||||||||||||
Sbjct: 241 actccctccgtcttataatataagggattttaagtttt 204
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||| |||||||||||||| || |||||||||||| |||||| ||||||| |||||
Sbjct: 170 aataaaacgagtggtcaaacagtgcaagcaaaaactc--aaaatcctttatattatggga 227
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 228 cggagggagta 238
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||| |||||| | || ||||||||| |||||| |||||||| |||||
Sbjct: 70 aataagacgagtgatcaaacagtacaaacaaaaactc--aaaatcccttatattatggga 13
Query: 231 cggagggagtac 242
|||||||||||
Sbjct: 12 tggagggagtac 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||| |||||||||||||| |||||| ||||||
Sbjct: 3 actccctccatcccataatataagggattttgagtttt 40
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||||||||||||||| |||||| ||||||
Sbjct: 237 actccctccgtcccataatataaaggattttgagtttt 200
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa Japonica
Group
Length = 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || |||||||| | |||||||| |||||||| |||||
Sbjct: 171 aataagacgagtggtcaaacagtgcaagcaaaa--tatcaaaatcccttatattatggga 228
Query: 231 cggagggagta 241
|||||| ||||
Sbjct: 229 cggaggaagta 239
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||| || |||||||| | |||||||| |||||||| ||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaagcaaaa--tatcaaaatcccttatattagggga 13
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 12 cggagggagtac 1
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||| | || |||||||||||| |||||| ||||||| |||||
Sbjct: 166 aataagacgagtggtcaaccagtgcaagcaaaaactc--aaaatccgttatattatggga 223
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 224 cggagggagta 234
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
||||| |||||||||| ||||||||||||||||
Sbjct: 34 caaaaactcttatattatgggacggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||||| ||||
Sbjct: 3 actccctccgtcccataatataagagttttt 33
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactct 208
|||||||||||||||||||| || || ||||||||||
Sbjct: 62 aataagacgagtggtcaaacagtgcaaacaaaaactct 25
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||||||||||||||| |||||| ||||||
Sbjct: 233 actccctccgtcccataatataacggattttgagtttt 196
>RF01058;MIR806;AAAA02032415.1/3027-2786 39946:Oryza sativa Indica
Group
Length = 242
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || ||| |||| | ||||||||||||||||| ||||
Sbjct: 173 aataagacgagtggtcaaacagtgcaagtaaaa--tatcaaaatctcttatattagggga 230
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 231 cggagggagta 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||| ||||||| ||||||||||| | |||||||| |||||||| ||||
Sbjct: 70 aataagacgagcggtcaaatagtgtaagcaaaa--tatcaaaatcccttatattagggga 13
Query: 231 cggagggagta 241
| |||||||||
Sbjct: 12 cagagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||| ||||||||||||||||
Sbjct: 240 actccctccgtcccctaatataagagatttt 210
>RF01058;MIR806;AACV01004826.1/22071-22312 39947:Oryza sativa
Japonica Group
Length = 242
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||||||||||||||||| || |||||||| | |||||||| |||||||| |
Sbjct: 170 ttaaataagacgagtggtcaaacagtgcaagcaaaa--tgtcaaaatcccttatattagg 227
Query: 228 ggacggagggagtac 242
||| |||||||||||
Sbjct: 228 ggatggagggagtac 242
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||||||||| | | || |||||| ||||||||||||||||| |||||
Sbjct: 175 aataagacgagtggtcaaatggtacaaacaaaaa--atcaaaatctcttatattatggga 232
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 233 cggagggagta 243
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||| ||| || ||||||||| || |||||| |||||||| |||||
Sbjct: 70 aataagacgaatggtcgaacagtgcaagcaaaaaatc--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||||||||||
Sbjct: 242 actccctccgtcccataatataagagatttt 212
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggatttt 33
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||| ||||||| |||||| |||||||| |||||
Sbjct: 172 aataagacgagtggtcaaacagtataagtaaaaactt--aaaatcccttatattatggga 229
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 230 cggagggagta 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||||||||||
Sbjct: 239 actccctccgtcccataatataagggattttaagtttt 202
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || || |||||| ||||||||| ||||||| || ||
Sbjct: 70 aataagacgagtggtcaaacagtgcaaacaaaaa--ctcaaaatcccttatatcatgaga 13
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 12 cggagggagtac 1
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || ||||||||| |||||||| |||||||| |||||
Sbjct: 174 aataagacgagtggtcaaacagtgcaagcaaaaa--gtcaaaatcccttatattatggga 231
Query: 231 cggagggagta 241
|||| ||||||
Sbjct: 232 cggatggagta 242
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
|||||||||||||||||||||||| ||||||
Sbjct: 241 actccatccgtcccataatataagggatttt 211
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 19 catccgtcccataatataagagattttaagttttcatttgca 60
|||||||||||||||||||| |||||| | |||| |||||||
Sbjct: 7 catccgtcccataatataagggattttgactttttatttgca 48
>RF01062;MIR812;AAAA02018397.1/69188-69020 39946:Oryza sativa Indica
Group
Length = 169
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||||| ||||||
Sbjct: 35 aataagacgagtggtcaaacgttgtaagtaaaaac 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| ||| ||||||
Sbjct: 132 ttaaataagacgagtggtcaaacgttgcaagtaaaaac 169
>RF01062;MIR812;AACV01023991.1/981-810 39947:Oryza sativa Japonica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| |||||||||||||||||||
Sbjct: 35 aataagacgagtggttaaacgttgtaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||| ||| ||||||||||
Sbjct: 138 aataagacgagtggtcaaatgttacaagcaaaaac 172
>RF01062;MIR812;AAAA02004443.1/24290-24120 39946:Oryza sativa Indica
Group
Length = 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||||| ||||||
Sbjct: 35 aataagacgagtggtcaaacgttgtaaggaaaaac 1
>RF01062;MIR812;AAAA02025228.1/28145-27974 39946:Oryza sativa Indica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AP005698.3/85213-85385 39947:Oryza sativa Japonica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| |||||||
Sbjct: 139 aataagacgagtggtcaaacgttgtaaacaaaaac 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| |||| ||||||||||||||||||||||
Sbjct: 35 aataagatgagtagtcaaacgttgtaagcaaaaac 1
>RF01062;MIR812;AP004330.3/32219-32048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||||| ||||||
Sbjct: 35 aataagacgagtggtcaaacgttgtaagtaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaac 190
|||||||||||||||||||||||
Sbjct: 135 ttaaataagacgagtggtcaaac 157
>RF01062;MIR812;AP002538.2/42335-42164 39947:Oryza sativa Japonica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 138 aataagacgagtggtcaaacgttgcaagcaaaaac 172
>RF01062;MIR812;AAAA02004436.1/4027-4199 39946:Oryza sativa Indica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 139 aataagacgagtggtcaaacgttgcaagcaaaaac 173
>RF01062;MIR812;AACV01006131.1/2219-2048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||| |||||||||||||||||||||||
Sbjct: 35 aataagacgagcggtcaaacgttgtaagcaaaaac 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 174 aagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||| || |||||||
Sbjct: 141 aagacgagtggtcaaacgttgaaaacaaaaac 172
>RF01062;MIR812;AAAA02017093.1/21668-21840 39946:Oryza sativa Indica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| |||||||||||||||||||||||||||
Sbjct: 35 aataagatgagtggtcaaacgttgtaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaa 201
||||||||||||| ||||||||| |||||||
Sbjct: 139 aataagacgagtgatcaaacgttataagcaa 169
>RF01062;MIR812;AACV01022520.1/58374-58200 39947:Oryza sativa
Japonica Group
Length = 175
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AACV01013528.1/595-423 39947:Oryza sativa Japonica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagcaaaaac 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttg 194
||||||||||||||||||||||||
Sbjct: 139 aataagacgagtggtcaaacgttg 162
>RF01062;MIR812;AAAA02010901.1/16278-16093 39946:Oryza sativa Indica
Group
Length = 186
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 152 aataagacgagtggtcaaacgttgcaagcaaaaac 186
>RF01062;MIR812;AACV01011247.1/5926-6098 39947:Oryza sativa Japonica
Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagcaaaaac 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| |||||||||| ||||||||||
Sbjct: 136 ttaaataagacgagtagtcaaacgttacaagcaaaaac 173
>RF01062;MIR812;AP008208.1/3789206-3789378 39947:Oryza sativa
Japonica Group
Length = 173
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagcaaaaac 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||| ||||||||||||| ||||||||||
Sbjct: 139 aataagacgaatggtcaaacgttgcaagcaaaaac 173
>RF01062;MIR812;AACV01013079.1/2108-2281 39947:Oryza sativa Japonica
Group
Length = 174
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagcaaaaac 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||| ||||||||||||||
Sbjct: 137 ttaaataagacaagtggtcaaacgtt 162
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtact 243
|||||||||||||||| ||||||||||||||||||
Sbjct: 99 caaaatctcttatattttgggacggagggagtact 133
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
||||||| |||||||| ||||||||||||||||
Sbjct: 37 caaaatcccttatattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| ||||||||| |||||||||||||||
Sbjct: 130 actccctccgtcccaaaatataagagatttt 100
>RF01062;MIR812;AAAA02021982.1/29150-28978 39946:Oryza sativa Indica
Group
Length = 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| || |||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttgcaaacaaaaac 1
>RF01062;MIR812;AAAA02004453.1/14160-14328 39946:Oryza sativa Indica
Group
Length = 169
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||| ||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttacaagcaaaaac 1
>RF01062;MIR812;AAAA02032712.1/11653-11824 39946:Oryza sativa Indica
Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||| |||||||| |||||||||||
Sbjct: 38 ttaaataagacgagtggccaaacgttataagcaaaaac 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||| |||||||||||||| ||||||
Sbjct: 135 ttaaataagacgagtgatcaaacgttgtaagtaaaaac 172
>RF01062;MIR812;AC135228.5/37458-37287 39947:Oryza sativa Japonica
Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| |||||||||| |||||||||||
Sbjct: 38 ttaaataagacgagtagtcaaacgttataagcaaaaac 1
>RF01062;MIR812;AC118340.1/59212-59371 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| ||| ||||||
Sbjct: 123 ttaaataagacgagtggtcaaacgttgcaagtaaaaac 160
>RF01062;MIR812;AACV01009271.1/10556-10725 39947:Oryza sativa
Japonica Group
Length = 170
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||| ||| |||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttataatcaaaaac 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
||||||||||| |||||||||||| || ||||||
Sbjct: 136 aataagacgagaggtcaaacgttgcaaacaaaaa 169
>RF01062;MIR812;AAAA02025488.1/32380-32208 39946:Oryza sativa Indica
Group
Length = 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||| |||||||||||||||||||||||| ||||||
Sbjct: 136 ttaaattagacgagtggtcaaacgttgtaagtaaaaac 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttg 194
|||||||||| ||||||||||||||||
Sbjct: 38 ttaaataagaagagtggtcaaacgttg 12
>RF01062;MIR812;AACV01013318.1/11508-11337 39947:Oryza sativa
Japonica Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||||||||||||||||||| |||||||||
Sbjct: 138 aataagacgagtggtcaaacgttgcaagcaaaaa 171
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||| ||||||||||||| ||| ||||||
Sbjct: 35 aataagacgaatggtcaaacgttgcaagtaaaaac 1
>RF01062;MIR812;AP003871.3/81937-82107 39947:Oryza sativa Japonica
Group
Length = 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| |||| ||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaatgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttg 194
|||||||||||||||| ||||||||||
Sbjct: 134 ttaaataagacgagtgttcaaacgttg 160
>RF01062;MIR812;AAAA02029081.1/4555-4382 39946:Oryza sativa Indica
Group
Length = 174
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||||| ||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttacaagcaaaaac 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| ||| ||||||||||
Sbjct: 140 aataagacgagtggtcaaacattgcaagcaaaaac 174
>RF01062;MIR812;AACV01022584.1/5740-5911 39947:Oryza sativa Japonica
Group
Length = 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| || |||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttgcaaacaaaaac 1
>RF01062;MIR812;AACV01014767.1/38057-37887 39947:Oryza sativa
Japonica Group
Length = 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| || ||||||||||
Sbjct: 134 ttaaataagacgagtggtcaaacggtgcaagcaaaaac 171
>RF01062;MIR812;AACV01010959.1/9597-9425 39947:Oryza sativa Japonica
Group
Length = 173
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| ||| ||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttgcaagtaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||| ||||| ||||||||||||| ||||||
Sbjct: 139 aataagacaagtggccaaacgttgtaagtaaaaac 173
>RF01062;MIR812;AAAA02008402.1/8990-9163 39946:Oryza sativa Indica
Group
Length = 174
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||||| ||| ||||||
Sbjct: 137 ttaaataagacgagtggtcaaacgttgcaagaaaaaac 174
>RF01062;MIR812;AC025905.3/49075-49245 4530:Oryza sativa (rice)
Length = 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| |||||||| ||||||
Sbjct: 134 ttaaataagacgagtggtcaaatgttgtaagtaaaaac 171
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 208 tcaaaatctcttatattgtgggacggagggagta 241
||||||||||||||||| ||||||||||||||||
Sbjct: 81 tcaaaatctcttatattatgggacggagggagta 114
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||||||||||
Sbjct: 113 actccctccgtcccataatataagagatttt 83
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
||||||| |||||||| ||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 6 actccctccgtcccataatataagggatttt 36
>RF01062;MIR812;AAAA02016557.1/24055-24229 39946:Oryza sativa Indica
Group
Length = 175
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaa 203
|||||||||||||||||||||||| ||||||||
Sbjct: 141 aataagacgagtggtcaaacgttgcaagcaaaa 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| ||| || |||||||
Sbjct: 35 aataagacgagtggtcaaacattgcaatcaaaaac 1
>RF01062;MIR812;AC113333.2/54699-54527 39947:Oryza sativa Japonica
Group
Length = 173
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||| ||||||||||||||||| ||||||||||
Sbjct: 38 ttaaataaaacgagtggtcaaacgttataagcaaaaa 2
>RF01062;MIR812;AACV01015146.1/17582-17413 39947:Oryza sativa
Japonica Group
Length = 170
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 169 taaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||||| ||||||||||
Sbjct: 37 taaataagacgagtggtcaaacgttacaagcaaaaac 1
>RF01062;MIR812;AAAA02003779.1/4099-3929 39946:Oryza sativa Indica
Group
Length = 171
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||||||||||||||||||||| |||||||||
Sbjct: 134 ttaaataagacgagtggtcaaacgttacaagcaaaaa 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||| ||||||||||| || |||||||
Sbjct: 35 aataagacgagtagtcaaacgttgcaaacaaaaac 1
>RF01062;MIR812;AP006554.2/116160-116331 39947:Oryza sativa Japonica
Group
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaa 203
||||||||||||| |||||||||||||||||||
Sbjct: 138 aataagacgagtgatcaaacgttgtaagcaaaa 170
>RF01062;MIR812;AP003343.3/135412-135241 39947:Oryza sativa Japonica
Group
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaa 204
||||||||||||| ||||||||||||| |||||||||
Sbjct: 38 ttaaataagacgaatggtcaaacgttgcaagcaaaaa 2
>RF01062;MIR812;AC025296.10/17042-16871 4530:Oryza sativa (rice)
Length = 172
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaa 204
||||||||||||||||||||||||||| ||| |||||
Sbjct: 135 ttaaataagacgagtggtcaaacgttgcaagtaaaaa 171
>RF01062;MIR812;AP004632.3/138567-138739 39947:Oryza sativa Japonica
Group
Length = 173
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 173 taagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| ||||||||||
Sbjct: 141 taagacgagtggtcaaacgttgcaagcaaaaac 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttg 194
||||||||||| |||||||||||||||
Sbjct: 38 ttaaataagacaagtggtcaaacgttg 12
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa Indica
Group
Length = 235
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||| || |||||||| | |||||||| |||||||| ||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaagcaaaa--tgtcaaaatcccttatattagggga 13
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 12 cggagggagtac 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || || ||||| | |||||||| |||||||| |||||
Sbjct: 167 aataagacgagtggtcaaacagtgcaaccaaaa--tgtcaaaatc-cttatattatggga 223
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 224 cggagggagta 234
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 58.0 bits (29), Expect = 6e-08
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | ||| |||| ||||||||| |||||||| |||||
Sbjct: 69 aataagacgagtggtcaaacagtacaagaaaaa---ctcaaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttt 40
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| || ||||||||||
Sbjct: 231 actccctccgtcccataatataagggactttaagtttt 194
>RF00906;MIR1122;AL442105.2/58754-58619 4530:Oryza sativa (rice)
Length = 136
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaa 47
||||||||||||||||||||||||| |||||||
Sbjct: 131 actccatccgtcccataatataagaaattttaa 99
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 208 tcaaaatctcttatattgtgggacggagggagta 241
||||||||||||||||| ||||||||| |||||
Sbjct: 38 tcaaaatctcttatattacgggacggagagagta 5
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
|||||||||||||||| ||||||||||||||||
Sbjct: 121 caaaatctcttatattatgggacggagggagta 153
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||||||||||
Sbjct: 152 actccctccgtcccataatataagagatttt 122
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
|||||||||||||||| ||||||||||||||||
Sbjct: 88 caaaatctcttatattttgggacggagggagta 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| ||||||||| |||||||||||||||
Sbjct: 119 actccctccgtcccaaaatataagagatttt 89
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagtac 242
||||||||||||||| |||||||||||||||||
Sbjct: 122 aaaatctcttatattatgggacggagggagtac 154
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| ||||||||||||||||||||||||||
Sbjct: 152 actccctccgtcccataatataagagatttta 121
>RF01062;MIR812;AAAA02031122.1/7716-7886 39946:Oryza sativa Indica
Group
Length = 171
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaa 203
||||||||||||||||||||||||||| ||| ||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttgcaagaaaaa 3
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| || |||||||
Sbjct: 137 aataagacgagtggtcaaacgttgcaaacaaaaac 171
>RF01062;MIR812;AAAA02028052.1/20898-20729 39946:Oryza sativa Indica
Group
Length = 170
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaag 198
||||||||||||||||||||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttgtaag 8
>RF01062;MIR812;AAAA02007928.1/15883-15712 39946:Oryza sativa Indica
Group
Length = 172
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaa 203
|||||||||||||||||||||| |||||||| ||||
Sbjct: 135 ttaaataagacgagtggtcaaatgttgtaagaaaaa 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||| ||| |||| ||||||
Sbjct: 35 aataagacgagtggtcaaatgttataagtaaaaac 1
>RF01062;MIR812;AACV01022757.1/36968-37137 39947:Oryza sativa
Japonica Group
Length = 170
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaa 203
|||||||||| |||||||||||||||||||| ||||
Sbjct: 38 ttaaataagatgagtggtcaaacgttgtaagaaaaa 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||| ||||||||||||||||||| ||| ||||||
Sbjct: 136 aataggacgagtggtcaaacgttgcaagtaaaaac 170
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | || ||||||||| |||||| |||||||| | |||
Sbjct: 167 aataagacgagtggtcaaacagtacaaacaaaaactc--aaaatcccttatattatagga 224
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 225 cggagggagta 235
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||| |||||| | |||||||||||| |||||| |||||||| || ||
Sbjct: 70 aataagacgagtaatcaaacagtacaagcaaaaactc--aaaatcccttatattatgaga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||| ||||||||||| |||||| ||||||
Sbjct: 3 actccctccgtctcataatataagggattttgagtttt 40
>RF01058;MIR806;AAAA02011733.1/14977-15220 39946:Oryza sativa Indica
Group
Length = 244
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | ||||||||| | |||||||| ||||||| ||||
Sbjct: 175 aataagacgagtggtcaaacagtataagcaaaa--tatcaaaatcccttatatcagggga 232
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 233 cggagggagta 243
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| || |||||| ||||||||||| | |||||||| ||||| || ||||
Sbjct: 70 aataagacgaatgatcaaacagtgtaagcaaaa--tatcaaaatcccttattttagggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||| ||||||| || ||| ||||| || |||||| |||||||| |||||
Sbjct: 174 aataagacgagtagtcaaacagtgcaagtaaaaagtc--aaaatcccttatattatggga 231
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 232 cggagggagta 242
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 241 actccctccgtcccataatataagggatttt 211
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | || |||||| ||||||||| |||||||| |||||
Sbjct: 171 aataagacgagtggtcaaacagttcaaccaaaaa--ctcaaaatcccttatattatggga 228
Query: 231 cggagggagta 241
||| |||||||
Sbjct: 229 cggggggagta 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 22 ccgtcccataatataagagattttaagtttt 52
||||||||||||||||| |||||| ||||||
Sbjct: 231 ccgtcccataatataagggattttgagtttt 201
>RF01058;MIR806;AP005719.3/82355-82591 39947:Oryza sativa Japonica
Group
Length = 237
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| || |||||||| | |||||||| |||||||| ||||
Sbjct: 168 aataagacgagtggtcaaacaatgcaagcaaaa--tgtcaaaatcccttatattagggga 225
Query: 231 cggagggagta 241
||||||||||
Sbjct: 226 tggagggagta 236
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||||||||| |||||| || || ||||| | |||||||| |||||||| |
Sbjct: 73 ttaaataagacgagtgatcaaacagtgcaaacaaaa--tgtcaaaatcccttatattagg 16
Query: 228 ggacggagggagta 241
||||||||||||||
Sbjct: 15 ggacggagggagta 2
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
||||||||||||| ||||| || |||||||||| | |||||| |||||||| |||||
Sbjct: 70 aataagacgagtgatcaaagagtgcaagcaaaaacac--aaaatcccttatattatggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 207 ctcaaaatctcttatattgtgggacggagggagta 241
||||||||| |||||||| ||||||||||||||||
Sbjct: 207 ctcaaaatcccttatattatgggacggagggagta 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||| ||||||
Sbjct: 240 actccctccgtcccataatataagggattttgagtttt 203
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 3 actccctccgtcccataatataagggatttt 33
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||| |||||||||||| | |||||| |||||||| ||| |
Sbjct: 70 aataagacgaatggtcaaacagtgtaagcaaaaa--gttaaaatcccttatattatggaa 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| ||||| |||||||||||| |||||||| ||||
Sbjct: 3 actccctccgttccataatataagggattttaactttt 40
>RF01058;MIR806;AAAA02007190.1/17283-17525 39946:Oryza sativa Indica
Group
Length = 243
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||| || |||||||| | |||||||| |||||||| ||||
Sbjct: 70 aataagacgaatggtcaaacagtgcaagcaaaa--tgtcaaaatcccttatattaaggga 13
Query: 231 cggagggagta 241
|||||||||||
Sbjct: 12 cggagggagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||||||||||||| | |||||||| | |||||||| |||||||| ||||
Sbjct: 174 aataagacgagtggtcaaacagtacaagcaaaa--tgtcaaaatcccttatattagggga 231
Query: 231 cggagggagtac 242
| ||||||||||
Sbjct: 232 ccgagggagtac 243
>RF00906;MIR1122;AAAA02018504.1/8341-8217 39946:Oryza sativa Indica
Group
Length = 125
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtacta 244
||||||| |||||||| |||||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagtacta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 6 actccctccgtcccataatataagggatttt 36
>RF00906;MIR1122;AAAA02018804.1/15100-15261 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtacta 244
|||||||||||||||| | |||||||||||||||||
Sbjct: 126 caaaatctcttatattttaggacggagggagtacta 161
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| ||||||||||||||||||||||||||
Sbjct: 134 actccctccgtcccataatataagagatttta 103
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
||||||||||||||| ||||||||||||||||
Sbjct: 104 aaaatctcttatattatgggacggagggagta 135
>RF00906;MIR1122;AC105731.2/34053-33963 39947:Oryza sativa Japonica
Group
Length = 91
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 211 aaatctcttatattgtgggacggagggagtac 242
||||| ||||||||||||||||||||||||||
Sbjct: 57 aaatcccttatattgtgggacggagggagtac 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 211 aaatctcttatattgtgggacggagggagta 241
||||| |||||||| ||||||||||||||||
Sbjct: 35 aaatcccttatattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattt 44
||||| |||||||||||||||||| |||||
Sbjct: 6 actccctccgtcccataatataagggattt 35
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtacta 244
||||||| |||||||| |||||||||||||||||||
Sbjct: 89 caaaatcccttatattatgggacggagggagtacta 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 120 actccctccgtcccataatataagggatttt 90
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa Indica
Group
Length = 117
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
||||||||||||||| ||||||||||||||||
Sbjct: 36 aaaatctcttatattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| ||||||||| ||||||||||||||||
Sbjct: 6 actccctccgtcccaaaatataagagatttta 37
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| ||||||||||||||||||||||||||
Sbjct: 135 actccctccgtcccataatataagagatttta 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
||||||||||||||| ||||||||||||||||
Sbjct: 105 aaaatctcttatattatgggacggagggagta 136
>RF00906;MIR1122;AL732333.2/10670-10758 4530:Oryza sativa (rice)
Length = 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtacta 244
|||||||||||||||| | |||||||||||||||||
Sbjct: 53 caaaatctcttatatttttggacggagggagtacta 88
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtacta 244
|||||||||||||||| ||||||||||||||||||
Sbjct: 95 caaaatctcttatatttagggacggagggagtacta 130
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttta 46
|||||||||||||||||||||||| |||||||
Sbjct: 139 actccatccgtcccataatataagggatttta 108
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa Japonica
Group
Length = 119
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| ||||||||||||||||||||||||||
Sbjct: 114 actccctccgtcccataatataagagatttta 83
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
||||||||||||||| ||||||||||||||||
Sbjct: 84 aaaatctcttatattatgggacggagggagta 115
>RF01062;MIR812;AAAA02023753.1/2650-2478 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttacaagcaaaaac 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||||||||
Sbjct: 139 aataagacgagtggtcaaacgttacaagcaaaaac 173
>RF01062;MIR812;AAAA02030701.1/27133-27304 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||||||||
Sbjct: 138 aataagacgagtggtcaaacgttccaagcaaaaac 172
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagca 200
||||||| |||||||||||||||| |||||
Sbjct: 35 aataagatgagtggtcaaacgttgcaagca 6
>RF01062;MIR812;AAAA02003196.1/32277-32449 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||| ||||||||||
Sbjct: 35 aataagacgagtgctcaaacgttgcaagcaaaaac 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||| || ||||||||||
Sbjct: 139 aataagacgagtggtcaaacgctgcaagcaaaaac 173
>RF01062;MIR812;AAAA02022710.1/4085-3916 39946:Oryza sativa Indica
Group
Length = 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| |||||||||||||
Sbjct: 136 aataagacgagtggtcaaacagtgtaagcaaaaac 170
>RF01062;MIR812;AAAA02008634.1/17996-17821 39946:Oryza sativa Indica
Group
Length = 176
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||||||||
Sbjct: 142 aataagacgagtggtcaaacgttacaagcaaaaac 176
>RF01062;MIR812;AAAA02007981.1/16808-16636 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||| ||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaagcgttgcaagcaaaaac 1
>RF01062;MIR812;AP003347.3/33179-33351 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| || |||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaatcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| | |||||||||||||||||| ||||||
Sbjct: 139 aataagatgggtggtcaaacgttgtaagtaaaaac 173
>RF01062;MIR812;AAAA02000569.1/44845-44673 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||| ||||||||||||||||| ||||||||||
Sbjct: 139 aataagccgagtggtcaaacgttgcaagcaaaaac 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 172 ataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||| ||||| ||||||||
Sbjct: 34 ataagacgagtggtcaaacattgtacgcaaaaac 1
>RF01062;MIR812;AAAA02000041.1/40875-40703 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| | ||||||||||
Sbjct: 139 aataagacgagtggtcaaacgtagcaagcaaaaac 173
>RF01062;MIR812;ABRL01002103.1/5388-5215 65489:Oryza barthii
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| ||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacattgcaagcaaaaac 1
>RF01062;MIR812;AC210489.1/6921-6765 4538:Oryza glaberrima (African
rice)
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||| ||||||||||
Sbjct: 123 aataagacgagtgatcaaacgttgcaagcaaaaac 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgtt 193
|||||||||||||||||||||||
Sbjct: 35 aataagacgagtggtcaaacgtt 13
>RF01062;MIR812;AAAA02011350.1/21929-21758 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| || |||||||
Sbjct: 138 aataagacgagtggtcaaacgttgcaaacaaaaac 172
>RF01062;MIR812;AACV01010498.1/7513-7684 39947:Oryza sativa Japonica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||| ||||||||||||| ||||||
Sbjct: 35 aataagacgagtggccaaacgttgtaagtaaaaac 1
>RF01062;MIR812;AACV01004632.1/2862-2689 39947:Oryza sativa Japonica
Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttg 194
|||||||||||||||||||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgttg 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||||||| ||||||||||| |||||||||
Sbjct: 140 aataagacgagtagtcaaacgttgaaagcaaaaa 173
>RF01062;MIR812;AACV01023580.1/13642-13468 39947:Oryza sativa
Japonica Group
Length = 175
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||| ||||||||||
Sbjct: 35 aataagacgagtgatcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AC098598.2/95832-96004 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||| ||||||||||||| ||||||||||
Sbjct: 139 aataagacgattggtcaaacgttgcaagcaaaaac 173
>RF01062;MIR812;AACV01003520.1/10218-10389 39947:Oryza sativa
Japonica Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||| ||||||
Sbjct: 138 aataagacgagtggtcaaacgttgcaagtaaaaac 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||| ||||||||||||||| |||||||||
Sbjct: 35 aataagacaagtggtcaaacgttgcaagcaaaaa 2
>RF01062;MIR812;AP003630.3/158976-158806 39947:Oryza sativa Japonica
Group
Length = 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| |||||||||||||
Sbjct: 137 aataagacgagtggtcaaacactgtaagcaaaaac 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||| |||||||||||| |||||||||||||
Sbjct: 38 ttaaataagatgagtggtcaaacactgtaagcaaaaac 1
>RF01062;MIR812;AAAA02033862.1/2577-2751 39946:Oryza sativa Indica
Group
Length = 175
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||| ||||||||||
Sbjct: 141 aataagacgagtgatcaaacgttgcaagcaaaaac 175
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| ||||||||||||||| ||||||||||
Sbjct: 35 aataagatgagtggtcaaacgttacaagcaaaaac 1
>RF01062;MIR812;AAAA02000644.1/83237-83065 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||||||||
Sbjct: 139 aataagacgagtggtcaaacgttacaagcaaaaac 173
>RF01062;MIR812;AAAA02022622.1/23036-23207 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| |||||||||||||||| ||||||||||
Sbjct: 35 aataagatgagtggtcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AL606589.3/82812-82638 39947:Oryza sativa Japonica
Group
Length = 175
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 170 aaataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||| |||| |||||||||||||||||||||||
Sbjct: 36 aaataaaacgaatggtcaaacgttgtaagcaaaaa 2
>RF01062;MIR812;AACV01003822.1/5854-6022 39947:Oryza sativa Japonica
Group
Length = 169
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| |||||||| ||||||||||
Sbjct: 35 aataagacgagtggttaaacgttgcaagcaaaaac 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaa 203
|||||||||||||||||||||||| ||| ||||
Sbjct: 135 aataagacgagtggtcaaacgttgcaagtaaaa 167
>RF01062;MIR812;AAAA02031277.1/7485-7316 39946:Oryza sativa Indica
Group
Length = 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||| ||||||
Sbjct: 136 aataagacgagtggtcaaacgttgcaagtaaaaac 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| |||| |||||||||
Sbjct: 38 ttaaataagacgagtggtcaaatgttgctagcaaaaac 1
>RF01062;MIR812;AC105768.2/60290-60126 39947:Oryza sativa Japonica
Group
Length = 165
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| |||||||||||| ||||||||||||||
Sbjct: 131 aataagatgagtggtcaaacattgtaagcaaaaac 165
>RF01062;MIR812;AP003957.2/18636-18808 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttg 194
|||||||||||||||||||||||||||
Sbjct: 136 ttaaataagacgagtggtcaaacgttg 162
>RF01062;MIR812;AACV01007669.1/15637-15464 39947:Oryza sativa
Japonica Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| ||| ||||||||||
Sbjct: 140 aataagacgagtggtcaaacattgcaagcaaaaac 174
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| ||| |||| ||||||||||
Sbjct: 35 aataagacgagtggttaaatgttgcaagcaaaaac 1
>RF01062;MIR812;AC121365.2/113520-113348 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| ||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacattgcaagcaaaaac 1
>RF01062;MIR812;AP008210.1/2457757-2457587 39947:Oryza sativa
Japonica Group
Length = 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||| ||||||||||
Sbjct: 137 aataagacgagtgatcaaacgttgcaagcaaaaac 171
>RF01062;MIR812;AL713939.6/126032-126207 4530:Oryza sativa (rice)
Length = 176
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||| || ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgctgcaagcaaaaac 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 174 aagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||| || |||||||
Sbjct: 145 aagacgagtggtcaaacgttgcaaacaaaaac 176
>RF01062;MIR812;AP008218.1/21453608-21453436 39947:Oryza sativa
Japonica Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| || |||||||||||
Sbjct: 35 aataagacgagtggtcaaacattataagcaaaaac 1
>RF01062;MIR812;AACV01000006.1/18111-18284 39947:Oryza sativa
Japonica Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||| ||| |||||||||||
Sbjct: 140 aataagacgagtggtcaaatgttataagcaaaaac 174
>RF01062;MIR812;AAAA02006568.1/7398-7226 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| |||||||| ||||||||||
Sbjct: 35 aataagacgagtggttaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AP003704.3/7695-7526 39947:Oryza sativa Japonica
Group
Length = 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||| || ||||||||||
Sbjct: 136 aataagacgagtggtcaaacggtgcaagcaaaaac 170
>RF01062;MIR812;AAAA02030638.1/19667-19840 39946:Oryza sativa Indica
Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||| ||||||||||
Sbjct: 140 aataagacgagtgatcaaacgttgcaagcaaaaac 174
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||| |||||| ||||| ||||
Sbjct: 35 aataagacgagtggtcatacgttgcaagcagaaac 1
>RF01062;MIR812;AP003504.1/88831-89001 39947:Oryza sativa Japonica
Group
Length = 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||| ||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagtaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgtt 193
|||||||||||||||||||||||
Sbjct: 137 aataagacgagtggtcaaacgtt 159
>RF01062;MIR812;AAAA02006907.1/61212-61384 39946:Oryza sativa Indica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||| ||||||||||
Sbjct: 35 aataagacgagtgatcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AAAA02010595.1/33394-33562 39946:Oryza sativa Indica
Group
Length = 169
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| || |||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaatcaaaaac 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||| ||||||||||||||| ||||||||||
Sbjct: 135 aataagactagtggtcaaacgttgcaagcaaaaac 169
>RF01062;MIR812;AP003904.3/273-450 39947:Oryza sativa Japonica Group
Length = 178
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaa 197
|||||||||||||||||||||||||||
Sbjct: 144 aataagacgagtggtcaaacgttgtaa 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||| |||||| ||| |||||||
Sbjct: 38 ttaaataagacgagtggtccaacgttataatcaaaaac 1
>RF01062;MIR812;AACV01006791.1/2979-3151 39947:Oryza sativa Japonica
Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| ||||||||||||||||||| |||||||
Sbjct: 139 aataagatgagtggtcaaacgttgtaaacaaaaac 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| |||||||||||||||| ||| ||||||
Sbjct: 35 aataagatgagtggtcaaacgttgcaagtaaaaac 1
>RF01062;MIR812;AAAA02000177.1/14304-14475 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||||||||
Sbjct: 35 aataagacgagtggtcaaacgttagaagcaaaaac 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaa 197
||||||||||| ||||||||||||||||||
Sbjct: 135 ttaaataagacaagtggtcaaacgttgtaa 164
>RF01062;MIR812;DJ347888.1/191-351 4530:Oryza sativa (rice)
Length = 161
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||| ||||||||||||||| ||||||||||
Sbjct: 127 aataagacaagtggtcaaacgttgcaagcaaaaac 161
>RF01062;MIR812;AAAA02000165.1/13009-12838 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||| ||||||||||||||| |||||||||||||
Sbjct: 138 aataaaacgagtggtcaaacggtgtaagcaaaaac 172
>RF01062;MIR812;AP008213.1/28888545-28888717 39947:Oryza sativa
Japonica Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| |||| ||||||
Sbjct: 139 aataagacgagtggtcaaacgttataagaaaaaac 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||| |||||||||||| ||||||||||
Sbjct: 35 aataagacgaatggtcaaacgttacaagcaaaaac 1
>RF01062;MIR812;AC097368.3/118302-118472 39947:Oryza sativa Japonica
Group
Length = 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| |||||||||||||
Sbjct: 35 aataagacgagtggtcaaacaatgtaagcaaaaac 1
>RF01062;MIR812;AP003849.2/59096-58923 39947:Oryza sativa Japonica
Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| || |||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaatcaaaaac 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||| ||||||||||||||| ||||||||||
Sbjct: 140 aataagacaagtggtcaaacgttgcaagcaaaaac 174
>RF01062;MIR812;AACV01002952.1/2774-2943 39947:Oryza sativa Japonica
Group
Length = 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 173 taagacgagtggtcaaacgttgtaagcaaaa 203
|||||||||||||||||||||| ||||||||
Sbjct: 138 taagacgagtggtcaaacgttgcaagcaaaa 168
>RF01062;MIR812;AAAA02021140.1/3763-3594 39946:Oryza sativa Indica
Group
Length = 170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| |||||||||||||||| ||||||||||
Sbjct: 136 aataagatgagtggtcaaacgttgcaagcaaaaac 170
>RF01062;MIR812;AACV01016994.1/6652-6822 39947:Oryza sativa Japonica
Group
Length = 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||| |||||||||||||||| ||||||||||
Sbjct: 35 aataagatgagtggtcaaacgttgcaagcaaaaac 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
|||||||||||||||||| |||||||
Sbjct: 134 ttaaataagacgagtggttaaacgtt 159
>RF01062;MIR812;AP005913.3/63117-62944 39947:Oryza sativa Japonica
Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| ||| ||||||
Sbjct: 35 aataagacgagtggtcaaacgttgcaagtaaaaac 1
>RF01062;MIR812;AC122143.2/133354-133183 39947:Oryza sativa Japonica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||| || |||||||||||
Sbjct: 35 aataagacgagtggtcaaacattataagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||| |||||||||||||
Sbjct: 138 aataagacgagtggtcaaaaagtgtaagcaaaaac 172
>RF01062;MIR812;AC144558.1/139667-139494 39947:Oryza sativa Japonica
Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||| |||||||||||||| ||||||
Sbjct: 140 aataagacgagtgatcaaacgttgtaagtaaaaac 174
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||| |||||||| ||||||||||
Sbjct: 38 ttaaataagacgagtggccaaacgttacaagcaaaaac 1
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtactatgc 247
||||||| |||||||| |||||||||||||||| |||||
Sbjct: 70 caaaatcccttatattttgggacggagggagtattatgc 32
>RF00906;MIR1122;AAAA02009787.1/33052-32959 39946:Oryza sativa
Indica Group
Length = 94
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
|||||||||||||||||||||||| ||||||
Sbjct: 6 actccatccgtcccataatataagggatttt 36
>RF00906;MIR1122;AACV01010673.1/7331-7451 39947:Oryza sativa
Japonica Group
Length = 121
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagtacta 244
|||||| |||||||| |||||||||||||||||||
Sbjct: 86 aaaatcccttatattatgggacggagggagtacta 120
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| |||||||||||||||||| |||||||
Sbjct: 116 actccctccgtcccataatataagggatttta 85
>RF00906;MIR1122;AAAA02015085.1/16920-17040 39946:Oryza sativa
Indica Group
Length = 121
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 210 aaaatctcttatattgtgggacggagggagtacta 244
|||||| |||||||| |||||||||||||||||||
Sbjct: 36 aaaatcacttatattatgggacggagggagtacta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| |||||||||||||||||| |||||||
Sbjct: 6 actccctccgtcccataatataagtgatttta 37
>RF00906;MIR1122;AAAA02031678.1/2806-2923 39946:Oryza sativa Indica
Group
Length = 118
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||||||||||||||| |||||||||||||
Sbjct: 113 actccatccgtcccatagtataagagatttt 83
>RF00906;MIR1122;AP005612.3/100916-100800 39947:Oryza sativa
Japonica Group
Length = 117
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||||||||||
Sbjct: 112 actccttccgtcccataatataagagatttt 82
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
|||||||||||||||| ||||||||| |||||||
Sbjct: 81 caaaatctcttatattatgggacggaaggagtac 114
>RF00906;MIR1122;ABRL01001744.1/6692-6848 65489:Oryza barthii
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||||||||||
Sbjct: 152 actccttccgtcccataatataagagatttt 122
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
|||||||||||||||| ||||||||| ||||||
Sbjct: 121 caaaatctcttatattatgggacggaaggagta 153
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa Indica
Group
Length = 135
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||||||||| |||||||||||||||||||
Sbjct: 130 actccatccgttccataatataagagatttt 100
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
|||||| |||||||| ||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| |||||||||||||||||| |||||||
Sbjct: 6 actccctccgtcccataatataagggatttta 37
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
|||||||||||||||| ||| ||||| |||||||
Sbjct: 99 caaaatctcttatattatggaacggatggagtac 132
>RF00906;MIR1122;AAAA02005800.1/23183-23322 39946:Oryza sativa
Indica Group
Length = 140
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagt 49
||||| |||||| ||||||||||||||||||||||
Sbjct: 135 actccctccgtctcataatataagagattttaagt 101
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
||||||||||||||| || |||||||||||||
Sbjct: 105 aaaatctcttatattatgagacggagggagta 136
>RF00906;MIR1122;AP008211.1/6609928-6610066 39947:Oryza sativa
Japonica Group
Length = 139
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
|||||||||||||||||||||||| ||||||
Sbjct: 134 actccatccgtcccataatataagggatttt 104
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||||||||||||| |||||||||||||||
Sbjct: 123 actccatccgtcccaaaatataagagatttt 93
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 37 caaaatcccttatattttgggacggagggagtac 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagta 241
|||||||||||||||| ||||||||| ||||||
Sbjct: 92 caaaatctcttatattttgggacggatggagta 124
>RF00906;MIR1122;AAAA02032829.1/30310-30153 39946:Oryza sativa
Indica Group
Length = 158
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtact 243
||||||| |||||||| ||||||||||||||||||
Sbjct: 122 caaaatcccttatattatgggacggagggagtact 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 153 actccctccgtcccataatataagggatttt 123
>RF00906;MIR1122;AL731623.3/93743-93613 39947:Oryza sativa Japonica
Group
Length = 131
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
|||||||| ||||||||||||||||||||||
Sbjct: 126 actccatctgtcccataatataagagatttt 96
>RF01062;MIR812;AAAA02005674.1/20425-20258 39946:Oryza sativa Indica
Group
Length = 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 131 ttaaataagacgagtggtcaaacgtt 156
>RF01062;MIR812;AAAA02033648.1/11539-11708 39946:Oryza sativa Indica
Group
Length = 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||||| || || |||||||
Sbjct: 133 ttaaataagacgagtggtcaaacggtgcaaacaaaaac 170
>RF01062;MIR812;AAAA02002551.1/6491-6321 39946:Oryza sativa Indica
Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaa 197
|||||||||| |||||||||||||||||||
Sbjct: 134 ttaaataagatgagtggtcaaacgttgtaa 163
>RF01062;MIR812;AAAA02015375.1/256-84 39946:Oryza sativa Indica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| |||||||| || ||||||||||
Sbjct: 38 ttaaataagacgagtagtcaaacggtgcaagcaaaaac 1
>RF01062;MIR812;AAAA02025478.1/24577-24748 39946:Oryza sativa Indica
Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| |||| ||| ||||||
Sbjct: 135 ttaaataagacgagtggtcaaatgttgcaagtaaaaac 172
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
|||||||||||||||| |||||||||
Sbjct: 38 ttaaataagacgagtgatcaaacgtt 13
>RF01062;MIR812;AAAA02030716.1/2093-1923 39946:Oryza sativa Indica
Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 134 ttaaataagacgagtggtcaaacgtt 159
>RF01062;MIR812;AAAA02035816.1/557-386 39946:Oryza sativa Indica
Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgta 196
||||||||||||||||||||||||||
Sbjct: 138 aataagacgagtggtcaaacgttgta 163
>RF01062;MIR812;AAAA02027427.1/13502-13329 39946:Oryza sativa Indica
Group
Length = 174
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgtt 13
>RF01062;MIR812;AAAA02027965.1/10752-10582 39946:Oryza sativa Indica
Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
||||||| |||||||||||||||| |||||||||
Sbjct: 137 aataagatgagtggtcaaacgttgaaagcaaaaa 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttg 194
|||||||||||||||||||||| ||||
Sbjct: 38 ttaaataagacgagtggtcaaatgttg 12
>RF01062;MIR812;AAAA02034323.1/17590-17763 39946:Oryza sativa Indica
Group
Length = 174
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaa 197
|||||||||| |||||||||||||||||||
Sbjct: 38 ttaaataagaagagtggtcaaacgttgtaa 9
>RF01062;MIR812;ABRL01000119.1/394-558 65489:Oryza barthii
Length = 165
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||||||||||||||| ||| |||||||||
Sbjct: 35 aataagacgagtggtcaaacattgcaagcaaaaa 2
>RF01062;MIR812;AAAA02034869.1/21771-21600 39946:Oryza sativa Indica
Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||| |||||||||| ||| ||||||
Sbjct: 38 ttaaataagacgagtgatcaaacgttgcaagtaaaaac 1
>RF01062;MIR812;AAAA02007162.1/13852-14024 39946:Oryza sativa Indica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||| ||||||||||| || |||||||
Sbjct: 38 ttaaataagacgagtagtcaaacgttgcaaacaaaaac 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 136 ttaaataagacgagtggtcaaacgtt 161
>RF01062;MIR812;AAAA02022467.1/164350-164522 39946:Oryza sativa
Indica Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaa 201
|||||||||||||| |||||||||||| ||||||
Sbjct: 136 ttaaataagacgagcggtcaaacgttgcaagcaa 169
>RF01062;MIR812;AACV01006444.1/8361-8528 39947:Oryza sativa Japonica
Group
Length = 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||| |||||||
Sbjct: 38 ttaaataagacgagtggtcaaacaatgtaaacaaaaac 1
>RF01062;MIR812;AAAA02006808.1/23504-23678 39946:Oryza sativa Indica
Group
Length = 175
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
||||||||||||||||||||||| |||||||||
Sbjct: 141 aataagacgagtggtcaaacgttacaagcaaaaa 174
>RF01062;MIR812;AAAA02005420.1/17308-17480 39946:Oryza sativa Indica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaa 204
|||||||||||||||||||| ||||||||||||
Sbjct: 139 aataagacgagtggtcaaaccgtgtaagcaaaaa 172
>RF01062;MIR812;AACV01012879.1/26666-26838 39947:Oryza sativa
Japonica Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgtt 13
>RF01062;MIR812;AP008215.1/20660684-20660840 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| |||| ||| ||||||
Sbjct: 120 ttaaataagacgagtggtcaaatgttgcaagtaaaaac 157
>RF01062;MIR812;AACV01002654.1/12821-12650 39947:Oryza sativa
Japonica Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||| ||||||||||||||||| ||| |||||||
Sbjct: 38 ttaaataaaacgagtggtcaaacgttataaacaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||| |||| ||| ||||||
Sbjct: 138 aataagacgagtggtcaaatgttgcaagaaaaaac 172
>RF01062;MIR812;AAAA02003932.1/22015-21845 39946:Oryza sativa Indica
Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| || ||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacagtgcaagcaaaaac 1
>RF01062;MIR812;AAAA02003819.1/3871-4039 39946:Oryza sativa Indica
Group
Length = 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| ||||| |||||||
Sbjct: 38 ttaaataagacgagtggtcaaacagtgtaaacaaaaac 1
>RF01062;MIR812;AAAA02004615.1/12774-12603 39946:Oryza sativa Indica
Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgtt 13
>RF01062;MIR812;AAAA02013581.1/2947-2775 39946:Oryza sativa Indica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
|||||||||||||||||||||| |||| ||| ||||||
Sbjct: 38 ttaaataagacgagtggtcaaatgttgcaagtaaaaac 1
>RF01062;MIR812;AK289013.1/3852-4024 39947:Oryza sativa Japonica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||| ||||||||||||||| ||| ||||||
Sbjct: 38 ttaaataagacaagtggtcaaacgttgcaagtaaaaac 1
>RF01062;MIR812;AAAA02018550.1/1210-1039 39946:Oryza sativa Indica
Group
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgtt 13
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaa 189
||||||||||||||||||||||
Sbjct: 135 ttaaataagacgagtggtcaaa 156
>RF01062;MIR812;AP003412.4/101949-102119 39947:Oryza sativa Japonica
Group
Length = 171
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaa 201
||||||||||||||||||||||| |||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacaatgtaagcaa 5
>RF01062;MIR812;AP006843.2/22978-23150 39947:Oryza sativa Japonica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| || ||| |||||||
Sbjct: 38 ttaaataagacgagtggtcaaacattataaacaaaaac 1
>RF01062;MIR812;AACV01016979.1/4172-4005 39947:Oryza sativa Japonica
Group
Length = 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaac 205
||||||||||||||||||||||| || ||||||||||
Sbjct: 131 ttaaataagacgagtggtcaaacagtgcaagcaaaaac 168
>RF01062;MIR812;AACV01000531.1/1917-1745 39947:Oryza sativa Japonica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 38 ttaaataagacgagtggtcaaacgtt 13
>RF01058;MIR806;AACV01000531.1/1711-1951 39947:Oryza sativa Japonica
Group
Length = 241
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgtt 193
||||||||||||||||||||||||||
Sbjct: 170 ttaaataagacgagtggtcaaacgtt 195
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 52.0 bits (26), Expect = 4e-06
Identities = 63/73 (86%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatatt-gtggg 229
|||||||||||||||||||| || |||||||| | |||||||| ||| |||| | |||
Sbjct: 174 aataagacgagtggtcaaacagtgcaagcaaaa--tatcaaaatcccttttattgggggg 231
Query: 230 acggagggagtac 242
|||||||||||||
Sbjct: 232 acggagggagtac 244
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtggga 230
|||||||||| ||||||||| | |||| |||| | |||||||| |||||||| ||||
Sbjct: 70 aataagacgaatggtcaaacagtataagtaaaa--tatcaaaatcccttatattagggga 13
Query: 231 cggagggagtac 242
||||||||||||
Sbjct: 12 cggagggagtac 1
>RF00906;MIR1122;AY196347.1/5474-5564 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 91
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 216 tcttatattgtgggacggagggagta 241
||||||||||||||||||||||||||
Sbjct: 62 tcttatattgtgggacggagggagta 87
>RF00906;MIR1122;AACV01006039.1/12119-12209 39947:Oryza sativa
Japonica Group
Length = 91
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 217 cttatattgtgggacggagggagtac 242
||||||||||||||||||||||||||
Sbjct: 63 cttatattgtgggacggagggagtac 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 211 aaatctcttatattgtgggacggagggagta 241
||||| |||||||| ||||||||||||||||
Sbjct: 35 aaatcccttatattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattt 44
||||| |||||||||||||||||| |||||
Sbjct: 6 actccctccgtcccataatataagggattt 35
>RF00906;MIR1122;AACV01010090.1/14054-14174 39947:Oryza sativa
Japonica Group
Length = 121
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 6 actccctccgtcccataatataagggatttt 36
>RF00906;MIR1122;AAAA02021973.1/23033-22904 39946:Oryza sativa
Indica Group
Length = 130
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 210 aaaatctcttatattgtgggacggagggagtact 243
||||||||||||||| | ||||||||||||||||
Sbjct: 36 aaaatctcttatattataggacggagggagtact 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| ||||||| ||||||||||||||||||
Sbjct: 6 actccctccgtcctataatataagagatttta 37
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa Japonica
Group
Length = 133
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattt 44
|||||||||||||||||||||||| |||||
Sbjct: 128 actccatccgtcccataatataagggattt 99
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 211 aaatctcttatattgtgggacggagggagta 241
||||| |||||||| ||||||||||||||||
Sbjct: 35 aaatcccttatattatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagattt 44
||||| |||||||||||||||||| |||||
Sbjct: 6 actccctccgtcccataatataagggattt 35
>RF00906;MIR1122;AP008215.1/10902261-10902381 39947:Oryza sativa
Japonica Group
Length = 121
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 85 caaaatcccttatattatgggacggagggagtac 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 116 actccctccgtcccataatataagggatttt 86
>RF00906;MIR1122;AACV01016185.1/13649-13778 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 210 aaaatctcttatattgtgggacggagggagtact 243
||||||||||||||| | ||||||||||||||||
Sbjct: 36 aaaatctcttatattataggacggagggagtact 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttta 46
||||| ||||||| ||||||||||||||||||
Sbjct: 6 actccctccgtcctataatataagagatttta 37
>RF00906;MIR1122;AP000364.1/54072-53981 39947:Oryza sativa
Japonica Group
Length = 92
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 tccgtcccataatataagagatttta 46
||||||||||||||||||||||||||
Sbjct: 81 tccgtcccataatataagagatttta 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagg 236
||||||||||||||| |||||||||||
Sbjct: 57 aaaatctcttatattatgggacggagg 83
>RF00906;MIR1122;AAAA02000541.1/33642-33511 39946:Oryza sativa
Indica Group
Length = 132
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 22 ccgtcccataatataagagattttaa 47
||||||||||||||||||||||||||
Sbjct: 120 ccgtcccataatataagagattttaa 95
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggagggagta 241
||||||||||||||| |||||||| |||||||
Sbjct: 97 aaaatctcttatattatgggacggtgggagta 128
>RF00906;MIR1122;AAAA02000569.1/43583-43659 39946:Oryza sativa
Indica Group
Length = 77
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 208 tcaaaatctcttatattgtgggacggagggagtactat 245
||||||| ||||||||| ||||| ||||||||||||||
Sbjct: 40 tcaaaatatcttatattttgggatggagggagtactat 77
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
|||||||||||||||| ||||||||||||||||
Sbjct: 123 caaaatctcttatatttagggacggagggagtac 156
>RF00906;MIR1122;AP008215.1/3184216-3184308 39947:Oryza sativa
Japonica Group
Length = 93
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagattttaagtttt 52
||||| |||||||||||||||||| |||||||||||||
Sbjct: 88 actccctccgtcccataatataag-gattttaagtttt 52
>RF00906;MIR1122;AAAA02003361.1/12742-12901 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
|||||| ||||||||| |||||||||||||||||
Sbjct: 37 caaaatttcttatattatgggacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| ||||||||||||||||||| |||||
Sbjct: 6 actccctccgtcccataatataagaaatttt 36
>RF00906;MIR1122;AAAA02006934.1/24563-24655 39946:Oryza sativa
Indica Group
Length = 93
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggaggga 238
|||||||||||||||| |||||||||||||
Sbjct: 37 caaaatctcttatattttgggacggaggga 8
>RF00906;MIR1122;AACV01024035.1/14460-14553 39947:Oryza sativa
Japonica Group
Length = 94
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 58 caaaatcccttatattatgggacggagggagtac 91
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 89 actccctccgtcccataatataagggatttt 59
>RF00906;MIR1122;AL606607.3/13860-13742 39947:Oryza sativa Japonica
Group
Length = 119
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggagggagtac 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 15 actccatccgtcccataatataagagatttt 45
||||| |||||||||||||||||| ||||||
Sbjct: 6 actccctccgtcccataatataagggatttt 36
>RF00906;MIR1122;AP008208.1/4007308-4007180 39947:Oryza sativa
Japonica Group
Length = 129
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 tccgtcccataatataagagatttta 46
||||||||||||||||||||||||||
Sbjct: 120 tccgtcccataatataagagatttta 95
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 210 aaaatctcttatattgtgggacggaggg 237
||||||||||||||| ||||||||||||
Sbjct: 96 aaaatctcttatattatgggacggaggg 123
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 209 caaaatctcttatattgtgggacggaggga 238
||||||| |||||||| |||||||||||||
Sbjct: 37 caaaatcccttatattatgggacggaggga 8
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 209 caaaatctcttatattgtgggacggagggagtac 242
||||||| |||||||| |||||||||||||||||
Sbjct: 104 caaaatcccttatattttgggacggagggagtac 137
>RF01062;MIR812;AAAA02004566.1/9745-9575 39946:Oryza sativa Indica
Group
Length = 171
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 171 aataagacgagtggtcaaacgttgtaagcaaaa 203
||||||| |||||||||||||||| ||||||||
Sbjct: 137 aataagatgagtggtcaaacgttgcaagcaaaa 169
