miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01043;MIR1023;ABEU01004286.1/181902-181728 145481:Physcomitrella
patens subsp. patens
Length = 175
Score = 333 bits (168), Expect = 5e-91
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1 gcgcagttacacagcttgcatttcggtgtccactctctccgtttcccttcccatgatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gcgcagttacacagcttgcatttcggtgtccactctctccgtttcccttcccatgatggc 63
Query: 61 tagccttgagtaagtacatatgttttgaacacatgtatgcttgcttaaaatcctttgtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tagccttgagtaagtacatatgttttgaacacatgtatgcttgcttaaaatcctttgtcg 123
Query: 121 gagggaatcggaaagagtgtacaatgaattgcaagcttgattgattcg 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gagggaatcggaaagagtgtacaatgaattgcaagcttgattgattcg 171
>RF01043;MIR1023;ABEU01008017.1/44531-44383 145481:Physcomitrella
patens subsp. patens
Length = 149
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tccactctctccgtttcccttccca 53
|||||||||||||||||||||||||
Sbjct: 33 tccactctctccgtttcccttccca 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 agagtgtacaatgaattgcaagcttgattg 163
|||||||| ||||||||||| |||||||||
Sbjct: 111 agagtgtataatgaattgcatgcttgattg 140
