miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01043;MIR1023;ABEU01004286.1/191785-191642 145481:Physcomitrella
           patens subsp. patens
          Length = 144

 Score =  238 bits (120), Expect = 1e-62
 Identities = 120/120 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagctttgaatgtcatcatacactctctccgtttcccttccgaatcgtttttcccctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acagctttgaatgtcatcatacactctctccgtttcccttccgaatcgtttttcccctca 72

                                                                       
Query: 61  tgcactggaaactgttggaagggaatcgggtggagtgcatcatgatctgcaagctccgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  tgcactggaaactgttggaagggaatcgggtggagtgcatcatgatctgcaagctccgac 12




>RF01043;MIR1023;ABEU01008017.1/44531-44383 145481:Physcomitrella
          patens subsp. patens
          Length = 149

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 16 atcatacactctctccgtttcccttcc 42
          ||||| |||||||||||||||||||||
Sbjct: 29 atcatccactctctccgtttcccttcc 55