miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00882;MIR811;AP005779.3/51362-51173 39947:Oryza sativa Japonica
Group
Length = 190
Score = 105 bits (53), Expect = 2e-22
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 75 taaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaaca 134
||||||||||||| | || |||||| |||||||||||||||| |||||||||||||||||
Sbjct: 107 taaaatttttacttatgactaaatccgtgagtaaaatttttattcgtgatgacgtgaaca 48
Query: 135 aatctcaagcgtctattatttaatctaacggtagttt 171
|||||||| | |||||| || || ||||||||||||
Sbjct: 47 aatctcaaacatctatttttcgatttaacggtagttt 11
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgaga 51
||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 8 tggaaactaccgttaaatcgaaaaatagatgtttgaga 45
>RF00882;MIR811;AACV01010725.1/18625-18794 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 2e-22
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 75 taaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaaca 134
|||||||| |||||| ||||||||||| ||||||||||||||||||||||||| || |||
Sbjct: 107 taaaatttctactcatgagtaaatctgcgagtaaaatttttactcgtgatgacatggaca 48
Query: 135 aatctcaagcgtctattatttaatctaacggtagttt 171
||||||| |||||||| || |||| ||| |||||||
Sbjct: 47 aatctcagacgtctatttttcaatccaacagtagttt 11
>RF00882;MIR811;AACV01011159.1/48984-49160 39947:Oryza sativa
Japonica Group
Length = 177
Score = 103 bits (52), Expect = 9e-22
Identities = 133/159 (83%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 16 gaaactaccgttagatcgagaaataaatgttcgagaatcatccacgttatcacg--caca 73
|||||||||||| |||||| |||| | || ||||| || ||||| | |||||| ||||
Sbjct: 10 gaaactaccgttggatcgaaaaatggacgtccgagattcgtccacatcatcacgagcaca 69
Query: 74 gtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaac 133
|||||||||||||| | ||||||||| ||||||||||||| ||||| |||||||||| |
Sbjct: 70 gtaaaatttttacttatgagtaaatccgtgagtaaaatttctactcatgatgacgtggat 129
Query: 134 aaatctcaagcgtctattatttaatctaacggtagtttt 172
|||||| |||||||| || |||| ||||||||||||
Sbjct: 130 gaatctcggacgtctatttttcaatccaacggtagtttt 168
>RF00882;MIR811;AP008207.1/26797227-26797432 39947:Oryza sativa
Japonica Group
Length = 206
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaa 132
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 101 agtaaaatttttactcctgagtaaatctgcgagtaaaatttttactcgtgatgacgtgga 42
Query: 133 caaatctca 141
| |||||||
Sbjct: 41 cgaatctca 33
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 106 taaaatttttactcgtgatgacgtgaacaaatct 139
|||||||||||||| |||||||||| || |||||
Sbjct: 139 taaaatttttactcatgatgacgtggacgaatct 172
>RF00882;MIR811;AACV01019844.1/6031-5844 39947:Oryza sativa Japonica
Group
Length = 188
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||
Sbjct: 109 cagtaaaatttttactcatgagtaaatccgtgagtaaaatttttacttgtggtgacgtgg 50
Query: 132 acaaatct 139
||||||||
Sbjct: 49 acaaatct 42
Score = 54.0 bits (27), Expect = 7e-07
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatctaa 162
||||||| ||||||||||||||||||| | |||||| |||| ||| ||| ||| ||
Sbjct: 111 gagtaaattttttactcgtgatgacgttgatgaatctccgacgtccatt-ttttatccaa 169
Query: 163 cggtagttttcaagtttcc 181
|||||||||||||||||||
Sbjct: 170 cggtagttttcaagtttcc 188
>RF00882;MIR811;AACV01019643.1/16248-16437 39947:Oryza sativa
Japonica Group
Length = 190
Score = 87.7 bits (44), Expect = 5e-17
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| ||
Sbjct: 110 cagtaaaatttttacttatgagtaaatccgtgagtaaaatttttactcatgatgacatgg 51
Query: 132 acaaatctcaagcgtctattatttaatctaacggtagttttcaa 175
|| |||||| |||| ||| || ||| |||||||||||||||
Sbjct: 50 acgaatctcggacgtccatttttcgatccaacggtagttttcaa 7
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatctaa 162
|||||||||| ||||||||||||||||| | |||||| |||| ||| || ||| ||
Sbjct: 112 gagtaaaattattactcgtgatgacgtggaagaatctcggacgtccatttttcgatccaa 171
Query: 163 cggtagttttcaagtttc 180
||||||||| ||||||||
Sbjct: 172 cggtagtttacaagtttc 189
>RF00882;MIR811;AAAA02013984.1/12288-12098 39946:Oryza sativa Indica
Group
Length = 191
Score = 85.7 bits (43), Expect = 2e-16
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||
Sbjct: 111 cagtaaaatttttactcatgagtaaatccacgagtaaaatttttaatcgtgatgacgtgg 52
Query: 132 acaaatctcaagcgtctattattt-aatctaacggtagttttcaagtttcc 181
|| ||||||| |||| ||| ||| ||| || ||||||||||| ||||||
Sbjct: 51 acgaatctcagacgtccattttttcgatccaatggtagttttcaggtttcc 1
>RF00882;MIR811;AY947245.1/9-198 4530:Oryza sativa (rice)
Length = 190
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaa 132
|||||| |||||||||| |||||||||| ||||| ||| |||| ||||||||||| || |
Sbjct: 82 agtaaattttttactcatgagtaaatctatgagtgaaaattttgctcgtgatgacatgga 141
Query: 133 caaatctcaagcgtctattatttaatctaacggtagttttcaagttt 179
|||||| |||||||| |||||| |||||||||||||||||||
Sbjct: 142 taaatcttgcacgtctattttttaattcaacggtagttttcaagttt 188
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 102 tgagtaaaatttttactcgtgatgacgtgaacaaatct 139
||||||||||||||||||||||||||||| || |||||
Sbjct: 80 tgagtaaaatttttactcgtgatgacgtggacgaatct 43
>RF00882;MIR811;AAAA02035628.1/5579-5778 39946:Oryza sativa Indica
Group
Length = 200
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatga 126
||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 104 cagtaaaatttttactcctaagtaaatctgtgagtaaaattttaactcgtgatga 50
>RF00882;MIR811;AACV01007818.1/9492-9681 39947:Oryza sativa Japonica
Group
Length = 190
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 77 aaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtg 130
|||||||||||| ||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 86 aaatttttactcctgagtaaatctgcgagtaaaatgtttactcgtgatgacgtg 139
>RF00882;MIR811;AACV01018529.1/7420-7582 39947:Oryza sativa Japonica
Group
Length = 163
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 91 gagtaaatctgtgagtaaaatttttactcgtgatgacgtgaacaaatctc 140
||||||||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 91 gagtaaatctgtgagtaaaatttatactcgtgatgacgtggacgaatctc 42
>RF00882;MIR811;AAAA02036585.1/9663-9852 39946:Oryza sativa Indica
Group
Length = 190
Score = 73.8 bits (37), Expect = 8e-13
Identities = 91/109 (83%)
Strand = Plus / Minus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaa 132
||||||||||| ||||| ||||||||||| |||| ||||||| ||| || |||||| ||
Sbjct: 109 agtaaaattttaactcatgagtaaatctgcgagttaaattttaacttatggtgacgtaaa 50
Query: 133 caaatctcaagcgtctattatttaatctaacggtagttttcaagtttcc 181
|||||||| |||| ||| | ||| |||||||||||||||||||||
Sbjct: 49 caaatctcggacgtccatttctcgatccaacggtagttttcaagtttcc 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaat 39
||||||||||||||||||||||||||
Sbjct: 183 tggaaactaccgttagatcgagaaat 158
>RF00882;MIR811;AAAA02031030.1/23128-23313 39946:Oryza sativa Indica
Group
Length = 186
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 74 gtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtg 130
||||||| |||||| | ||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 79 gtaaaatctttacttatgagtaaatccgtgagtaaaatttttactcgtgatggcgtg 135
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 110 atttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatctaacggtagt 169
|||||||||||| ||||||||||||||||| | |||| ||| ||| ||| |||||||||
Sbjct: 71 atttttactcgtaatgacgtgaacaaatcttagacgtccatt-ttttatccaacggtagt 13
Query: 170 tttcaag 176
|||||||
Sbjct: 12 tttcaag 6
>RF00882;MIR811;AAAA02010683.1/11721-11865 39946:Oryza sativa Indica
Group
Length = 145
Score = 73.8 bits (37), Expect = 8e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 101 gtgagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatct 160
|||||||||| ||||||||||||||||||| | |||||| |||||||| || ||||
Sbjct: 65 gtgagtaaaacttttactcgtgatgacgtggatgaatctcggacgtctatttttcaatcc 124
Query: 161 aacggtagttttcaagtttcc 181
|||||||||||| ||||||||
Sbjct: 125 aacggtagtttttaagtttcc 145
Score = 50.1 bits (25), Expect = 1e-05
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 17 aaactaccgttagatcgagaaataaatgttcgagaatcatccacgttatcacgcacagta 76
||||||||||| ||| || ||||| | || ||||| |||||||||| |||||| ||||
Sbjct: 135 aaactaccgttggattgaaaaatagacgtccgagattcatccacgtcatcacg---agta 79
Query: 77 aaatttttactcacg 91
||| |||||||||||
Sbjct: 78 aaagttttactcacg 64
>RF00882;MIR811;AAAA02017217.1/1664-1856 39946:Oryza sativa Indica
Group
Length = 193
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 100 tgtgagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatc 159
||||||||||||||||||| ||||||||||| || |||||| | |||| ||| ||| ||
Sbjct: 82 tgtgagtaaaatttttacttgtgatgacgtggacgaatctcgaacgtccattttttgttc 23
Query: 160 taacggtagttttcaagttt 179
|||||||||||| ||||||
Sbjct: 22 caacggtagttttaaagttt 3
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 91 gagtaaatctgtgagtaaaatttttactcgtgatgacgtgaacaaatctc 140
||||||||| ||||||||| |||||||||||||||||||| || ||||||
Sbjct: 103 gagtaaatccgtgagtaaattttttactcgtgatgacgtggacgaatctc 152
>RF00882;MIR811;AACV01007622.1/14314-14170 39947:Oryza sativa
Japonica Group
Length = 145
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 101 gtgagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatct 160
|||||||||| ||||||||||||||||||| | |||||| |||||||| || ||||
Sbjct: 81 gtgagtaaaacttttactcgtgatgacgtggatgaatctcggacgtctatttttcaatcc 22
Query: 161 aacggtagttttcaagttt 179
||||||||||| |||||||
Sbjct: 21 aacggtagtttccaagttt 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 66/78 (84%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatccacgttatcacgcaca 73
|||||||||||||| ||| || ||||| | || ||||| |||||||||| |||||| |
Sbjct: 8 tggaaactaccgttggattgaaaaatagacgtccgagattcatccacgtcatcacg---a 64
Query: 74 gtaaaatttttactcacg 91
|||||| |||||||||||
Sbjct: 65 gtaaaagttttactcacg 82
>RF00882;MIR811;AACV01022546.1/20331-20142 39947:Oryza sativa
Japonica Group
Length = 190
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaa 132
|||||| |||||||||| |||||| | |||||||||||||||||||||||||||| |
Sbjct: 82 agtaaactttttactcataagtaaacttacgagtaaaatttttactcgtgatgacgtgga 141
Query: 133 caaatct 139
|||||||
Sbjct: 142 caaatct 148
>RF00882;MIR811;AACV01012189.1/5143-5335 39947:Oryza sativa Japonica
Group
Length = 193
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 91 gagtaaatctgtgagtaaaatttttactcgtgatgacgtgaacaaatctc 140
||||||||| ||||||||| |||||||||||||||||||| || ||||||
Sbjct: 91 gagtaaatccgtgagtaaattttttactcgtgatgacgtggacgaatctc 42
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 100 tgtgagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatc 159
||||||||||||||||||| ||||||||||| | |||||| | |||| ||| ||| ||
Sbjct: 112 tgtgagtaaaatttttacttgtgatgacgtggatgaatctcgaacgtccattttttgttc 171
Query: 160 taacggtagttttcaagttt 179
|||||||||||| ||||||
Sbjct: 172 caacggtagttttaaagttt 191
>RF00882;MIR811;AP008213.1/28286961-28287136 39947:Oryza sativa
Japonica Group
Length = 176
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 94 taaatctgtgagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctatt 151
||||||| ||||||||||||||||||||||||||||| | |||||| | ||||||||
Sbjct: 89 taaatctatgagtaaaatttttactcgtgatgacgtggtcgaatctcgaacgtctatt 146
>RF00882;MIR811;AP008207.1/38757388-38757184 39947:Oryza sativa
Japonica Group
Length = 205
Score = 67.9 bits (34), Expect = 5e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 76 aaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaacaa 135
|||||||||||| ||||| ||||| |||| ||||||| ||||||||||||||| ||||
Sbjct: 102 aaaatttttacttctgagtacatctgcgagttaaattttaactcgtgatgacgtggacaa 43
Query: 136 atctca 141
||||||
Sbjct: 42 atctca 37
>RF00882;MIR811;AP008216.1/2366875-2367064 39947:Oryza sativa
Japonica Group
Length = 190
Score = 67.9 bits (34), Expect = 5e-11
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||| ||| ||||| |||| |||||| |||| ||||||| |||| || |||||||
Sbjct: 110 cagtaaaagtttaactcaggagtgaatctgcgagttaaattttaactcatggtgacgtgg 51
Query: 132 acaaatctcaagcgtctattatttaatctaacggtagttttcaagtttcc 181
|| |||||| |||| ||| | |||||||||||||||||||||||||
Sbjct: 50 acgaatctcggacgtccatttctcgatctaacggtagttttcaagtttcc 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 aaactaccgttagatcgagaaat 39
|||||||||||||||||||||||
Sbjct: 11 aaactaccgttagatcgagaaat 33
>RF00882;MIR811;AACV01018612.1/7996-8186 39947:Oryza sativa Japonica
Group
Length = 191
Score = 67.9 bits (34), Expect = 5e-11
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 80 tttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaacaaatct 139
|||||||||| ||||||||||| |||| ||||||||| ||||||||| ||| | ||| |
Sbjct: 90 tttttactcatgagtaaatctgcgagtgaaatttttaatcgtgatgatgtggaagaattt 149
Query: 140 caagcgtctattatttaatctaacggtagttttcaagtttcc 181
| |||||||| || || |||||||||||||||||||||
Sbjct: 150 cggacgtctatttttcgattcaacggtagttttcaagtttcc 191
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctc 140
||||||||||||||||| ||||||||||||| ||||||
Sbjct: 79 gagtaaaatttttactcatgatgacgtgaacgaatctc 42
>RF00882;MIR811;AAAA02016900.1/476-629 39946:Oryza sativa Indica
Group
Length = 154
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatccacgt 62
|||||||||||||| ||||||||||| ||||||||||| || |||||||
Sbjct: 8 tggaaactaccgttggatcgagaaatgaatgttcgagattcgtccacgt 56
Score = 58.0 bits (29), Expect = 5e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatccacgt 62
|||||||||||||| ||||||||||| || |||||||| || |||||||
Sbjct: 147 tggaaactaccgttggatcgagaaatgaacgttcgagattcgtccacgt 99
>RF00882;MIR811;AACV01025712.1/11139-11339 39947:Oryza sativa
Japonica Group
Length = 201
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 76 aaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatga 126
||||||||||||| ||||||||||||||||||||||| |||| ||||||
Sbjct: 101 aaaatttttactcctaagtaaatctgtgagtaaaattttaactcatgatga 151
>RF00882;MIR811;AP008218.1/21789829-21789658 39947:Oryza sativa
Japonica Group
Length = 172
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaa 132
||||||| ||||||||| |||| |||| |||||||||||||||||||||||| || |
Sbjct: 109 agtaaaaattttactcatgagtgaatccacgagtaaaatttttactcgtgatgatatgga 50
Query: 133 caaatct 139
|||||||
Sbjct: 49 caaatct 43
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 102 tgagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatcta 161
|||||||||||||||||| || ||||||| || |||||| |||| ||| || ||| |
Sbjct: 93 tgagtaaaatttttactcatggtgacgtggacgaatctcggacgtccatttttcgatcca 152
Query: 162 acggtagttttcaagtttcc 181
|||||| |||||||||||||
Sbjct: 153 acggtaattttcaagtttcc 172
>RF00882;MIR811;AP008211.1/13881786-13881992 39947:Oryza sativa
Japonica Group
Length = 207
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 76 aaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatga 126
||||||||||||| ||||||||||||||||||||||| |||| ||||||
Sbjct: 104 aaaatttttactcctaagtaaatctgtgagtaaaattttaactcatgatga 54
>RF00882;MIR811;AAAA02018245.1/3316-3511 39946:Oryza sativa Indica
Group
Length = 196
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtg 130
|||||||||||||||| | |||||||| |||||||||||| |||| ||||||||||
Sbjct: 102 agtaaaatttttactcctaaataaatctgcgagtaaaattttaactcatgatgacgtg 45
>RF00882;MIR811;AAAA02019820.1/14450-14253 39946:Oryza sativa Indica
Group
Length = 198
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 74 gtaaaatttttactcacgagtaaatctgtgagtaaaatttttactc 119
|||||||||| ||||| |||||||||||||||| ||||||| ||||
Sbjct: 83 gtaaaattttaactcatgagtaaatctgtgagttaaattttaactc 128
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 30 atcgagaaataaatgttcgaga 51
||||||||||||||||||||||
Sbjct: 167 atcgagaaataaatgttcgaga 146
>RF00882;MIR811;AP008209.1/15317006-15317195 39947:Oryza sativa
Japonica Group
Length = 190
Score = 58.0 bits (29), Expect = 5e-08
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||||||| ||||| |||| |||||| |||| ||||||| |||| || |||||||
Sbjct: 81 cagtaaaattttaactcatgagtgaatctgcgagttaaattttaactcatggtgacgtgg 140
Query: 132 acaaatctcaagcgtctattatttaatctaacggtagttttcaagtttc 180
|| ||||| ||||| ||| ||||||||||||||| ||||||||
Sbjct: 141 acggatctcgggcgtccatttcacgatctaacggtagtttccaagtttc 189
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaat 39
|||||||||||||||||||| |||||
Sbjct: 183 tggaaactaccgttagatcgtgaaat 158
>RF00882;MIR811;ABRL01001766.1/2922-2733 65489:Oryza barthii
Length = 190
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatct 139
|||||||||||||||||||||||||||| || |||||
Sbjct: 112 gagtaaaatttttactcgtgatgacgtggacgaatct 148
>RF00882;MIR811;AP008208.1/23189984-23190185 39947:Oryza sativa
Japonica Group
Length = 202
Score = 58.0 bits (29), Expect = 5e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatccacgt 62
|||||||||||||| |||||||||||| | |||||||| || |||||||
Sbjct: 195 tggaaactaccgttggatcgagaaatagacgttcgagattcgtccacgt 147
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaat 39
|||||||||||||| |||||||||||
Sbjct: 8 tggaaactaccgttggatcgagaaat 33
>RF00882;MIR811;AACV01018439.1/18142-18316 39947:Oryza sativa
Japonica Group
Length = 175
Score = 58.0 bits (29), Expect = 5e-08
Identities = 103/125 (82%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 17 aaactaccgttagatcgagaaataaatgttcgagaatcatccacgttatcacgcacagta 76
||||||||||| |||||||||||| | || ||||| || ||||||| | || || |||
Sbjct: 11 aaactaccgttggatcgagaaatagacgtccgagattcgtccacgtcacca-tcagagtt 69
Query: 77 aaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgt-gaacaa 135
||||||| ||||| |||| |||||| |||| ||||||| ||| || |||||| ||||||
Sbjct: 70 aaattttaactcatgagtgaatctgcgagttaaattttaacttatggtgacgtggaacaa 129
Query: 136 atctc 140
|||||
Sbjct: 130 atctc 134
>RF00882;MIR811;AC093490.2/29240-29051 39947:Oryza sativa Japonica
Group
Length = 190
Score = 58.0 bits (29), Expect = 5e-08
Identities = 89/109 (81%)
Strand = Plus / Minus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaa 132
||||||||||| ||||| |||| |||||| |||| ||||||| ||| ||||||| || |
Sbjct: 109 agtaaaattttaactcatgagttaatctgcgagttaaattttaactgatgatgacatgga 50
Query: 133 caaatctcaagcgtctattatttaatctaacggtagttttcaagtttcc 181
| |||||| |||| ||| | ||| |||||||||||||||||||||
Sbjct: 49 cgaatctcggacgtccatttctcgatccaacggtagttttcaagtttcc 1
>RF00882;MIR811;AP008216.1/12703892-12703725 39947:Oryza sativa
Japonica Group
Length = 168
Score = 58.0 bits (29), Expect = 5e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctatt 151
||||||||||||||||||||||||| || || |||||| | ||||||||
Sbjct: 80 gagtaaaatttttactcgtgatgacatggacgaatctcgaacgtctatt 32
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 101 gtgagtaaaatttttactcgtgatgac 127
|||| ||||||||||||||||||||||
Sbjct: 88 gtgattaaaatttttactcgtgatgac 114
>RF00882;MIR811;AP008214.1/8590310-8590506 39947:Oryza sativa
Japonica Group
Length = 197
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctcaa 142
|||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 72 gagttaaattttaactcgtgatgacgtgaacgaatctcaa 33
>RF00882;MIR811;AACV01014090.1/5530-5719 39947:Oryza sativa Japonica
Group
Length = 190
Score = 56.0 bits (28), Expect = 2e-07
Identities = 88/108 (81%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||||||| ||||| |||| |||||| |||| ||||||| |||| || |||| ||
Sbjct: 110 cagtaaaattttaactcatgagtgaatctgcgagttaaattttaactcatggtgacatgg 51
Query: 132 acaaatctcaagcgtctattatttaatctaacggtagttttcaagttt 179
|| |||||| | |||| ||| | ||| ||||||| |||||||||||
Sbjct: 50 acgaatctcgaacgtccatttctcgatccaacggtaattttcaagttt 3
>RF00882;MIR811;AACV01001699.1/1665-1840 39947:Oryza sativa Japonica
Group
Length = 176
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaa 132
||||||||||| ||||| |||| |||||| |||| ||||||| |||| || ||||||| |
Sbjct: 102 agtaaaattttaactcatgagtgaatctgcgagttaaattttaactcatggtgacgtgga 43
Query: 133 caaatctc 140
| ||||||
Sbjct: 42 cgaatctc 35
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaat 39
|||||||||||||| |||||||||||
Sbjct: 176 tggaaactaccgttggatcgagaaat 151
>RF00882;MIR811;AC025906.2/63397-63226 4530:Oryza sativa (rice)
Length = 172
Score = 54.0 bits (27), Expect = 7e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctcaagcgtctattatttaatctaa 162
|||||||||||| |||| |||||||||| || |||||| | |||| ||| || ||| ||
Sbjct: 79 gagtaaaattttaactcatgatgacgtggacgaatctcgaacgtccatttttcgatccaa 20
Query: 163 cggtagttttcaagtttcc 181
||||| ||| |||||||||
Sbjct: 19 cggtaatttccaagtttcc 1
>RF00882;MIR811;AAAA02026952.1/2226-2383 39946:Oryza sativa Indica
Group
Length = 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 102 tgagtaaaatttttactcgtgatgacgtgaacaaatctc 140
|||||||||||||||||||||||||| || || ||||||
Sbjct: 80 tgagtaaaatttttactcgtgatgacatggacgaatctc 118
>RF00882;MIR811;AACV01021615.1/16427-16616 39947:Oryza sativa
Japonica Group
Length = 190
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatcca 59
|||||||||||||| ||||||||||| | |||||||| |||||||
Sbjct: 183 tggaaactaccgttggatcgagaaatggacgttcgagattcatcca 138
>RF00882;MIR811;AAAA02000662.1/53247-53081 39946:Oryza sativa Indica
Group
Length = 167
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 85 actcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtg 130
||||| ||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 71 actcatgagtacatccatgagtaaaatttttactcgagatgacgtg 116
>RF00882;MIR811;AC087545.3/112016-111827 4530:Oryza sativa (rice)
Length = 190
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatcca 59
|||||||||||||| ||||||||||| | |||||||| |||||||
Sbjct: 8 tggaaactaccgttggatcgagaaatggacgttcgagattcatcca 53
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaat 39
|||||||||||||| |||||||||||
Sbjct: 183 tggaaactaccgttggatcgagaaat 158
>RF00882;MIR811;AAAA02010902.1/8400-8606 39946:Oryza sativa Indica
Group
Length = 207
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||||||| ||||| |||||||||| |||| ||||||| ||| | ||||||||
Sbjct: 71 cagtaaaattttaactcatgagtaaatctacgagttaaattttaacttacggtgacgtga 130
Query: 132 acaaatctc 140
|| ||||||
Sbjct: 131 acgaatctc 139
>RF00882;MIR811;AP008207.1/7313386-7313552 39947:Oryza sativa
Japonica Group
Length = 167
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 85 actcacgagtaaatctgtgagtaaaatttttactcgtgatgacgt 129
||||| ||||| ||| ||||||||||||||||||| ||||||||
Sbjct: 97 actcatgagtacatccatgagtaaaatttttactcgagatgacgt 53
>RF00882;MIR811;AACV01023714.1/4029-4218 39947:Oryza sativa Japonica
Group
Length = 190
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtga 131
|||||||||||| || || |||| |||| |||||| ||||||| |||| || |||||||
Sbjct: 110 cagtaaaattttaacgcatgagtgaatccgtgagttaaattttaactcatggtgacgtgg 51
Query: 132 acaaatctc 140
|| ||||||
Sbjct: 50 acgaatctc 42
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaat 39
|||||||||||||| |||||||||||
Sbjct: 8 tggaaactaccgttggatcgagaaat 33
>RF00882;MIR811;AACV01021685.1/21653-21839 39947:Oryza sativa
Japonica Group
Length = 187
Score = 50.1 bits (25), Expect = 1e-05
Identities = 51/59 (86%), Gaps = 3/59 (5%)
Strand = Plus / Minus
Query: 72 cagtaaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtg 130
|||||||||||||| | |||| ||| |||||||||||||||||||||| || |||||
Sbjct: 107 cagtaaaatttttaat---gagtgaatgtgtgagtaaaatttttactcgtaataacgtg 52
Score = 46.1 bits (23), Expect = 2e-04
Identities = 64/77 (83%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatccacgttatcacgcaca 73
|||||||||||||| |||||| |||| |||| || | ||||||||||||| ||| |
Sbjct: 8 tggaaactaccgttggatcgaacaatagatgtctgaaattcatccacgttattacg---a 64
Query: 74 gtaaaatttttactcac 90
|||||| ||||||||||
Sbjct: 65 gtaaaaattttactcac 81
>RF00882;MIR811;AP003432.2/53412-53218 39947:Oryza sativa Japonica
Group
Length = 195
Score = 50.1 bits (25), Expect = 1e-05
Identities = 84/103 (81%), Gaps = 3/103 (2%)
Strand = Plus / Minus
Query: 82 tttactcacgagtaaatctgtgagtaaaatttttactcg---tgatgacgtgaacaaatc 138
|||||||| ||||||| | || ||||||||||||||| | ||||||||||||| ||||
Sbjct: 103 tttactcatgagtaaacccgtaagtaaaatttttacttgtaatgatgacgtgaacgaatc 44
Query: 139 tcaagcgtctattatttaatctaacggtagttttcaagtttcc 181
| | |||| ||| || |||| ||||||| ||| ||||||||
Sbjct: 43 tagaacgtccatttttcaatcgaacggtaatttataagtttcc 1
>RF00882;MIR811;U72726.1/1587-1398 4528:Oryza longistaminata
Length = 190
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 gaaactaccgttagatcgagaaat 39
||||||||||||||||||||||||
Sbjct: 181 gaaactaccgttagatcgagaaat 158
>RF00882;MIR811;AC137004.2/84099-84288 39947:Oryza sativa Japonica
Group
Length = 190
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 154 ttaatctaacggtagttttcaagtttcc 181
|||||| |||||||||||||||||||||
Sbjct: 28 ttaatccaacggtagttttcaagtttcc 1
>RF00882;MIR811;AACV01018363.1/24870-25075 39947:Oryza sativa
Japonica Group
Length = 206
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctca 141
|||| ||||||| ||||||||||||||| || |||||||
Sbjct: 77 gagttaaattttaactcgtgatgacgtggacgaatctca 39
>RF00882;MIR811;AP005469.3/119107-119293 39947:Oryza sativa Japonica
Group
Length = 187
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctca 141
|||| ||||||| ||||||||||||||| || |||||||
Sbjct: 120 gagttaaattttaactcgtgatgacgtggacgaatctca 158
>RF00882;MIR811;AP008214.1/7631575-7631781 39947:Oryza sativa
Japonica Group
Length = 207
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctca 141
|||| ||||||| ||||||||||||||| || |||||||
Sbjct: 77 gagttaaattttaactcgtgatgacgtggacgaatctca 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctca 141
|||| ||||||| ||| |||||||||||||| |||||||
Sbjct: 131 gagttaaattttaacttgtgatgacgtgaacgaatctca 169
>RF00882;MIR811;AAAA02017506.1/6670-6500 39946:Oryza sativa Indica
Group
Length = 171
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctca 141
|||| ||||||| ||||||||||||||| || |||||||
Sbjct: 93 gagttaaattttaactcgtgatgacgtggacgaatctca 131
>RF00882;MIR811;AAAA02035505.1/2787-2581 39946:Oryza sativa Indica
Group
Length = 207
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctca 141
|||| ||||||| ||||||||||||||| || |||||||
Sbjct: 131 gagttaaattttaactcgtgatgacgtggacgaatctca 169
>RF00882;MIR811;AP004775.3/73554-73348 39947:Oryza sativa Japonica
Group
Length = 207
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 103 gagtaaaatttttactcgtgatgacgtgaacaaatctca 141
|||| ||||||| ||||||||||||||| || |||||||
Sbjct: 78 gagttaaattttaactcgtgatgacgtggacgaatctca 40
>RF00882;MIR811;AAAA02036078.1/14130-13941 39946:Oryza sativa Indica
Group
Length = 190
Score = 44.1 bits (22), Expect = 7e-04
Identities = 82/102 (80%)
Strand = Plus / Minus
Query: 75 taaaatttttactcacgagtaaatctgtgagtaaaatttttactcgtgatgacgtgaaca 134
||||||||| ||||| |||| | |||| |||| ||||||| |||| || ||||||| |
Sbjct: 107 taaaattttaactcatgagtgagtctgcgagttaaattttaactcatggtgacgtggatg 48
Query: 135 aatctcaagcgtctattatttaatctaacggtagttttcaag 176
||||||| |||| ||| | | ||| |||| |||||||||||
Sbjct: 47 aatctcagacgtccattttctgatccaacgatagttttcaag 6
>RF00882;MIR811;AP008216.1/21480880-21480674 39947:Oryza sativa
Japonica Group
Length = 207
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 73 agtaaaatttttactcacgagtaaatctgtgagtaaaatttt 114
||||||||||||||| ||||||||||| |||| |||||||
Sbjct: 104 agtaaaatttttacttcagagtaaatctgcgagttaaatttt 145
>RF00882;MIR811;AACV01021623.1/12386-12215 39947:Oryza sativa
Japonica Group
Length = 172
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaat 39
|||||||||||||| |||||||||||
Sbjct: 8 tggaaactaccgttggatcgagaaat 33
>RF00882;MIR811;AP004096.3/67929-67741 39947:Oryza sativa Japonica
Group
Length = 189
Score = 44.1 bits (22), Expect = 7e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 17 aaactaccgttagatcgagaaataaatgttcgagaatcatccacgt 62
|||||| |||| ||||||||||| |||||||||| || |||||||
Sbjct: 11 aaactatcgttggatcgagaaatggatgttcgagattcgtccacgt 56
>RF00882;MIR811;AP008211.1/27977359-27977189 39947:Oryza sativa
Japonica Group
Length = 171
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaat 39
||||||||||| ||||||||||||||
Sbjct: 8 tggaaactaccattagatcgagaaat 33
>RF00882;MIR811;AC079038.3/8841-8645 4530:Oryza sativa (rice)
Length = 197
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 156 aatctaacggtagttttcaagtttcc 181
||||||||| ||||||||||||||||
Sbjct: 26 aatctaacgatagttttcaagtttcc 1
Score = 44.1 bits (22), Expect = 7e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 17 aaactaccgttagatcgagaaataaatgttcgagaatcatccacgt 62
||||||||||| ||||||||||| |||| ||||| || |||||||
Sbjct: 187 aaactaccgttgcatcgagaaatagatgtccgagattcgtccacgt 142
>RF00882;MIR811;AACV01023726.1/42602-42405 39947:Oryza sativa
Japonica Group
Length = 198
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tggaaactaccgttagatcgagaaat 39
|||||||||||||| |||||||||||
Sbjct: 159 tggaaactaccgttggatcgagaaat 134
>RF00882;MIR811;AP008218.1/25179567-25179378 39947:Oryza sativa
Japonica Group
Length = 190
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 14 tggaaactaccgttagatcgagaaataaatgttcgagaatcatccacgttatca 67
|||||||||||||| |||||| ||||| | || ||||| || ||||||| ||||
Sbjct: 8 tggaaactaccgttggatcgaaaaatagacgtccgagattcgtccacgtcatca 61
