miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 135/156 (86%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| |||||||||||||||||||| |||| | || |||||||||||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacatt-gcccacattcatatatatgtc 63
Query: 70 aatgaatctaaac--atatatgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| || |||||||||| || ||||||| |||||||||| || ||||||| |
Sbjct: 64 aatgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggaca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||||||||||||||||| |||||| |||| ||||
Sbjct: 123 ttctagaaagtcttataatatgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 132/156 (84%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||||||||||||||||||| ||| || ||| |||||||| || |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtc-catcttcatatagatgtc 100
Query: 70 aatgaatctaa--acatatatgtgtctatattcattaacatctatataaatatggacaca 127
||||||||||| |||||||| |||||| ||||||| |||| ||||| ||| ||| || |
Sbjct: 99 aatgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| |||||||||||||||| |||||| |||| ||||
Sbjct: 40 tgttagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 135/157 (85%), Gaps = 5/157 (3%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||||||||||| ||||||||||||||||||||||||| | || ||||||||| ||
Sbjct: 159 ctacttcctccgtttcatattataagactttctagcatt-gcccacattcatatagatgc 101
Query: 69 taatgaatctaaacatatatgtgtctata--ttcattaacatctatataaatatggacac 126
||||||||||| |||||||| ||| |||| ||||||||||||||||| | | ||| ||
Sbjct: 100 taatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggca- 42
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||||||| |||||| |||| ||||
Sbjct: 41 atgctagaaagtcttataatatgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 133/157 (84%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||||||||||||||||||||||| | || | ||||||| || ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcc-cacaatcatatagatgtt 63
Query: 70 aatgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacaca 127
|||||| ||| ||| ||||| |||||| |||||||| ||||||||| ||| ||| || |
Sbjct: 64 aatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagtag 164
| ||||||||||||||||| |||||| |||| |||||
Sbjct: 123 tgctagaaagtcttataatatgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 105 bits (53), Expect = 2e-22
Identities = 135/158 (85%), Gaps = 7/158 (4%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||||||||||||||||||||||| | || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcatt-gcccacattcatatagatgtt 63
Query: 70 aatgaatctaaacatata----tgtgtctatattcattaacatctatataaatatggaca 125
|||||||||| | ||||| ||||| || |||||||||||||||||| ||| ||| ||
Sbjct: 64 aatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggca 123
Query: 126 catactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||||||| |||||| |||| ||||
Sbjct: 124 -atgctagaaagtcttataatatgaaacggagggagta 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 132/158 (83%), Gaps = 7/158 (4%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||||||||||||||||||||||| | || ||||||||| || ||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcc-cacattcatatagatgtt 102
Query: 70 aatgaatctaaacata----tatgtgtctatattcattaacatctatataaatatggaca 125
|||||||||| ||| | ||| | | || |||||||||||||||||| ||| ||| ||
Sbjct: 101 aatgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggca 42
Query: 126 catactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||||||| |||||| |||| ||||
Sbjct: 41 -atgctagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 93.7 bits (47), Expect = 8e-19
Identities = 133/157 (84%), Gaps = 6/157 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatattt- 69
|||| ||||||| |||||||||||||||||||||||||| | || ||||||||| || |
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacc-cacattcatatagatgtt 63
Query: 70 -aatgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacac 126
||| |||||| ||| || || | |||| |||||||||||||||||| ||| ||| ||
Sbjct: 64 aaattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggca- 122
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|| |||||||||||||||||||||||| |||| ||||
Sbjct: 123 atgctagaaagtcttataatctgaaacggagggagta 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 131/157 (83%), Gaps = 6/157 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| ||||||||||||||||||||| | || ||||||||| || ||
Sbjct: 159 tactccctccgtttcagattataagactttctagcatt-gcccacattcatatagatgtt 101
Query: 70 aatgaatctaaacata--tatgtgtctatattca-ttaacatctatataaatatggacac 126
|||||||||| | ||| || ||||||| ||| | ||||||||||||| ||| ||| |
Sbjct: 100 aatgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggta- 42
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||||||| |||||| |||| ||||
Sbjct: 41 atgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 134/158 (84%), Gaps = 5/158 (3%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatcacatattcatatatat- 67
|||||| ||||||| ||||| | ||||||||||||||||| | |||||||||||| ||
Sbjct: 160 actactccctccgtttcataatgtaagactttctagcattg-ctcatattcatatagatg 102
Query: 68 ttaatgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggaca 125
|||||||||||| ||| ||||| |||||| |||||||||||||||||| ||| ||| ||
Sbjct: 101 ttaatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggca 42
Query: 126 catactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||| |||| | | |||||| |||| ||||
Sbjct: 41 -atactagaaagacttacattatgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 132/157 (84%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | |||| |||||||| ||| | || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcc-cacattcatatagatgtt 63
Query: 70 aatgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| |||||| ||||||||| |||||||||||||||||| |||||| || |
Sbjct: 64 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagtag 164
| ||||||||||||| | | |||||| |||| |||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 132/156 (84%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | ||||||||||||||||| || | ||||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtc-tacattcatatagatgtt 63
Query: 70 aatgaatctaaacatata--tgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| ||||||| ||||| || |||||||||||||||||| ||| |||||| |
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggaca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||| | | |||||| |||| ||||
Sbjct: 123 acctagaaagtcttacattatgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/156 (83%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | ||||||||||||| || || || ||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtc-cacattcatatagatgtt 100
Query: 70 aatgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||||||| | ||| |||||| |||||||||||||||||| ||| | |||| |
Sbjct: 99 aatgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagaca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||||||||||||| | | |||||| |||| ||||
Sbjct: 40 tgctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/116 (87%), Gaps = 5/116 (4%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacatatatg 89
|||||||||||||||||| || || |||||||||||| |||||||||||| |||| ||||
Sbjct: 1 ataagactttctagcattgtc-cacattcatatatatgttaatgaatctagacatgtatg 59
Query: 90 tgt--ctatattcattaacatctatataaatatggacacatactagaaagtcttat 143
||| ||| |||||||||||||||||| ||| ||| || || ||||||||||||||
Sbjct: 60 tgtgcctagattcattaacatctatatgaatgtgggca-atgctagaaagtcttat 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 98/116 (84%), Gaps = 5/116 (4%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattatcacatattcatatatat-ttaatgaatctaa--acatata 87
|||||||||||||||||| | || ||||||||| || |||||||||||| ||| |||
Sbjct: 114 ataagactttctagcattgcc-cacattcatatagatgttaatgaatctaggcacacata 56
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttat 143
|||||| |||||||||||| ||||| ||| |||||| || ||||||||||||||
Sbjct: 55 catgtctagattcattaacatatatatgaatgtggaca-atgctagaaagtcttat 1
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 116/135 (85%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | | ||||||||||||| ||| | |||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcc-catattcatatagatgtt 100
Query: 70 aatgaatctaaacatatatg--tgtctatattcattaacatctatataaatatggacaca 127
|||||||||| ||||||||| |||||| |||||||||||||||||| ||||||| ||
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggca-g 41
Query: 128 tactagaaagtctta 142
|||||||||||||||
Sbjct: 40 tactagaaagtctta 26
Score = 69.9 bits (35), Expect = 1e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 85 atatgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttata 144
|||| |||||| |||||||||||||||||| ||||||| || |||||||||||||||| |
Sbjct: 81 atatatgtctagattcattaacatctatatgaatatgggca-atactagaaagtcttaca 139
Query: 145 atctgaaaccgaggtagta 163
| |||||| |||| ||||
Sbjct: 140 ttgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 7e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatcacatattcatata 64
|||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct: 118 ttactacttcctccgtttcatattataagactttctagcatta-cccatattcatata 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacacatactagaaagtcttataatctgaaaccga 156
|||||||| ||||||||| ||||||| | || ||||||||||||||||| |||||| ||
Sbjct: 49 attcattatcatctatatgaatatgggta-atgctagaaagtcttataatatgaaacgga 107
Query: 157 ggtagtag 164
|| |||||
Sbjct: 108 ggaagtag 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| |||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacatt 42
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 132/157 (84%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||| |||||||||||||| ||||| | || |||||||||||| ||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcc-cacattcatatatatgtt 63
Query: 70 aatgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatggacaca 127
||| |||||| |||||||| ||| | | |||||||||||| ||||| ||| ||| || |
Sbjct: 64 aataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagtag 164
| |||||||||||||||| |||||| ||||||||||
Sbjct: 123 tgctagaaagtcttataacttgaaacggaggtagtag 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 130/157 (82%), Gaps = 5/157 (3%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||| ||||||| ||| |||||||||||||||||||| | || |||||||||||| |
Sbjct: 159 ctactacctccgtttcaagttataagactttctagcatt-gcccacattcatatatatgt 101
Query: 69 taatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacac 126
|||||||||| |||||||| |||||| ||| |||||||| ||||| ||| ||| ||
Sbjct: 100 taatgaatcttggcacatatatatgtctagatttattaacatatatatgaatgtgggca- 42
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|| | |||||||||||||| |||||| |||| ||||
Sbjct: 41 atgccagaaagtcttataacttgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 131/156 (83%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | | ||||||||||||| ||| | || ||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcc-cacattcatatagatgtt 100
Query: 70 aatgaatctaaacatatatg--tgtctatattcattaacatctatataaatatggacaca 127
|||||||||| ||||||||| |||||| |||||||||||||||||| ||||||| ||
Sbjct: 99 aatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggca-g 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||| | | |||||| |||| ||||
Sbjct: 40 tactagaaagtcttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 85 atatgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttata 144
|||| |||||| |||||||||||||||||| ||| ||| || |||||||||||||||| |
Sbjct: 81 atatatgtctagattcattaacatctatatgaatgtgggca-atactagaaagtcttaca 139
Query: 145 atctgaaaccgaggtagta 163
| |||||| |||| ||||
Sbjct: 140 ttgtgaaacggagggagta 158
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 72/80 (90%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||| ||||||| ||| |||||||||||||||||||||| | || |||||||||||| |
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcatta-cccacattcatatatatgt 75
Query: 69 taatgaatctaaacatatat 88
||||||||||| ||||||||
Sbjct: 74 taatgaatctagacatatat 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat 67
|||||||||||| ||||||||||||||||||||| |||| | || ||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtatta-cccacattcatatatat 60
Score = 61.9 bits (31), Expect = 3e-09
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 82 catatatgtgtctatattcattaacatctatataaatatggacacatactagaaagtctt 141
||||||| |||||| |||||||||||| ||||| ||| ||| | || ||||||||||||
Sbjct: 52 catatatatgtctagattcattaacatatatatgaatgtgggta-atgctagaaagtctt 110
Query: 142 ataatctgaaaccgaggtagtag 164
||||| |||||| |||| |||||
Sbjct: 111 ataatttgaaacggagggagtag 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|||||||||||||||||||| |||||| |||| ||||
Sbjct: 41 atactagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 93/107 (86%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | ||||||||||||||||| | || ||||||||| || ||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcatt-gcccacattcatatagatgtt 100
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatat 114
||||||||| ||| |||| |||||||| ||||||||||||||||||
Sbjct: 99 aatgaatctagaaatatatgtgtgtctagattcattaacatctatat 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 128/156 (82%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | ||||||||| ||||||| | || ||||||||| || ||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattc-ctcacattcatatagatgtt 63
Query: 70 aatgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| ||| | ||| | |||| |||||||||||||||||| ||| ||| || |
Sbjct: 64 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||||||||||||| | | |||||| |||| ||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 93/107 (86%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | ||||||||||||||||| | || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcatt-gcccacattcatatagatgtt 63
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatat 114
||||||||| ||| |||| |||||||| ||||||||||||||||||
Sbjct: 64 aatgaatctagaaatatatgtgtgtctagattcattaacatctatat 110
Score = 58.0 bits (29), Expect = 4e-08
Identities = 128/156 (82%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | ||||||||| ||||||| | || ||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattg-ctcacattcatatagatgtt 100
Query: 70 aatgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| ||| | ||| | |||| |||||||||||||||||| ||| ||| || |
Sbjct: 99 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||||||||||||| | | |||||| |||| ||||
Sbjct: 40 tgctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 128/154 (83%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | ||||||||| ||||||| | |||||||| || || ||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattg-cttatattcatctagatgtt 98
Query: 70 aatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacacata 129
|||||||||| |||||| |||||||| |||||||||||||||||| ||| ||| || ||
Sbjct: 97 aatgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggca-atg 39
Query: 130 ctagaaagtcttataatctgaaaccgaggtagta 163
|||||||| |||| | | |||||| |||| ||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 94/111 (84%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | |||| |||||||||||| | || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcc-cacattcatatagatgtt 63
Query: 70 aatgaatctaaacatatatgtgtctatattcattaacatctatataaatat 120
|||||||||| ||| | || |||||| ||||||||||||||| || |||||
Sbjct: 64 aatgaatctagacacacatatgtctagattcattaacatctagatgaatat 114
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 75.8 bits (38), Expect = 2e-13
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
||||||||| || ||||||||||||||||||||||||| || || |||||||||||| ||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtc-cacattcatatatatgtt 77
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 76 aatgaatcta 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatcacatattcatatatat 67
|||||||||||||| || ||||||||||||||||||||||| | || ||||||||||||
Sbjct: 3 actacttcctccgtttcttattataagactttctagcatta-cccacattcatatatat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatctg 149
|||||| |||||||||||| ||||| ||| |||||| || ||||||||||||||||| ||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggaca-atgctagaaagtcttataatatg 121
Query: 150 aaaccgaggtagta 163
|||| |||| ||||
Sbjct: 122 aaacagaggaagta 135
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 91/105 (86%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | ||||||||||||||||| | || |||||| || || ||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacc-cacattcatttagatgtt 63
Query: 70 aatgaatctaaaca--tatatgtgtctatattcattaacatctat 112
|||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct: 64 aatgaatctaaacacatatatatgtctagattcattaacatctat 108
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/46 (89%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaacatatat--gtgtctatattcattaacatcta 111
|||||||||||| |||||||| |||| || |||||||||||||||
Sbjct: 101 ttaatgaatctagacatatatatgtgtttagattcattaacatcta 56
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 73.8 bits (37), Expect = 7e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtctta 142
|||||| ||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 65 tgtctagattcattaacatctatataaatatggaca-atgctagaaagtctta 116
Score = 52.0 bits (26), Expect = 3e-06
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 17 ctccgtatcatattataagactttctagcattatcacatattcatatatat-ttaatgaa 75
|||||| ||||| | ||||||||||||||||| || |||||| ||||| || ||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtc-catatttatatagatgttaatgaa 73
Query: 76 tctaaacata 85
|||| |||||
Sbjct: 72 tctagacata 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcatt 48
|||||| |||||| ||||| | |||||||||||||||||
Sbjct: 4 ctactttctccgtttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/156 (83%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | | ||||||||| ||| ||| || || ||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtc-cacattcatatagatgtt 100
Query: 70 aatgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| |||||| || | |||| ||||||||||||||||| ||||||| || |
Sbjct: 99 aatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||||| | |||||| |||| ||||
Sbjct: 40 tactagaaagtcttatattatgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/156 (83%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| ||||||||||||||| ||| | |||||||||||| || ||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcc-catattcatatagatgtt 63
Query: 70 aatgaatctaaacatata--tgtgtctatattcattaacatctatataaatatggacaca 127
|||||| ||| | ||||| | |||||| |||||||||||||||||| ||| |||||| |
Sbjct: 64 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggaca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||| ||||||||| | | |||||| |||| ||||
Sbjct: 123 tcctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/157 (82%), Gaps = 3/157 (1%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatcacatattcatatatat 67
||||||||||||||| ||||| | ||||||||||||||||| || || ||||||||| ||
Sbjct: 159 tactacttcctccgtttcataatgtaagactttctagcattgtc-cacattcatataaat 101
Query: 68 -ttaatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacac 126
|||||||||||| ||| || | ||| ||||||||||||| |||| ||||| | ||
Sbjct: 100 gttaatgaatctagacacgcatatacctagattcattaacatcaatatgaatataggca- 42
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||| | | |||||| |||| ||||
Sbjct: 41 atgctagaaagtcttacattatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 128/155 (82%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | ||||||||||||||||| | |||||||||| || ||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcct-atattcatattgatgtt 63
Query: 70 aatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacacata 129
|||||||||| |||| ||||||| |||||||||||| ||||| ||| |||||| ||
Sbjct: 64 aatgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggaca-atg 122
Query: 130 ctagaaagtcttataatctgaaaccgaggtagtag 164
||||||||||||| | | |||||| |||| |||||
Sbjct: 123 ctagaaagtcttacattatgaaacggaggaagtag 157
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 73.8 bits (37), Expect = 7e-13
Identities = 100/116 (86%), Gaps = 5/116 (4%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacat--ata 87
|||||||||||||||||| | ||||||||||||||| |||||||||||| ||| |||
Sbjct: 1 ataagactttctagcatt-gcccatattcatatatatgttaatgaatctaggcatacata 59
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttat 143
| || ||| |||||||||||||||||| ||| ||| || || ||||||||||||||
Sbjct: 60 tatgcctagattcattaacatctatatgaatgtgggca-atgctagaaagtcttat 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 99/116 (85%), Gaps = 5/116 (4%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacatatatg 89
|||||||||||||||||| | || ||||||||| || |||||||||||| ||||||||
Sbjct: 114 ataagactttctagcattgcc-cacattcatatagatgttaatgaatctaggcatatatg 56
Query: 90 tgt--ctatattcattaacatctatataaatatggacacatactagaaagtcttat 143
| | ||| |||||||||||| ||||| ||||||| || || ||||||||||||||
Sbjct: 55 tatgcctagattcattaacatatatatgaatatgggca-atgctagaaagtcttat 1
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/156 (83%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| ||||||||||||||| ||| | |||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcc-catattcatatagatgtt 100
Query: 70 aatgaatctaaacatata--tgtgtctatattcattaacatctatataaatatggacaca 127
|||||| ||| | ||||| | |||||| |||||||||||||||||| ||| |||||| |
Sbjct: 99 aatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggaca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||| ||||||||| | | |||||| |||| ||||
Sbjct: 40 tcctaaaaagtcttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/156 (83%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | | ||||||||| ||| ||| || || ||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtc-cacattcatatagatgtt 63
Query: 70 aatgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| |||||| || | |||| ||||||||||||||||| ||||||| || |
Sbjct: 64 aatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||||| | |||||| |||| ||||
Sbjct: 123 tactagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatc 51
|||||||||||| ||||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatc 74
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatcacatattcatata 64
||||||| ||||||| ||||||||||||||||| |||||||||| || |||||||||
Sbjct: 2 tactactccctccgtttcatattataagactttatagcattatc-cacattcatata 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||||| |||||| |||| ||||
Sbjct: 81 ctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 73.8 bits (37), Expect = 7e-13
Identities = 100/116 (86%), Gaps = 5/116 (4%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacatatatg 89
|||||||||||||||||| | || |||||||||||| |||||||||||| | ||||||
Sbjct: 1 ataagactttctagcattgcc-cacattcatatatatgttaatgaatctagatatatata 59
Query: 90 tgt--ctatattcattaacatctatataaatatggacacatactagaaagtcttat 143
||| ||| |||||||||||||||||| ||| ||| || || ||||||||||||||
Sbjct: 60 tgtgcctagattcattaacatctatatgaatgtgggca-atgctagaaagtcttat 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 98/116 (84%), Gaps = 5/116 (4%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattatcacatattcatatatat-ttaatgaatctaa--acatata 87
|||||||||||||||||| | || ||||||||| || |||||||||||| |||||||
Sbjct: 114 ataagactttctagcattgcc-cacattcatatagatgttaatgaatctaggcacatata 56
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttat 143
| | |||| |||||||||||| ||||| ||| ||| || || ||||||||||||||
Sbjct: 55 tatatctagattcattaacatatatatgaatgtgggca-atgctagaaagtcttat 1
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatata 66
|||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtc-catattcatatata 51
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| | ||| |||||||||||||||||||
Sbjct: 5 tacttcctccgttttataatataagactttctagcatt 42
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 91/105 (86%), Gaps = 6/105 (5%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatta-tcacatattcatatatat-t 68
|||||||||||| ||| | | ||||||||||||||||| ||||||| |||||| || |
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacata--catatagatgt 101
Query: 69 taatgaatctaaaca--tatatgtgtctatattcattaacatcta 111
||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 100 taatgaatctaaacacgtacatatgtctatattcattaacatcta 56
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcatt 48
||||||||||||| |||||||||||||||||||||||||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcatt 77
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 95 atattcattaacatctatataaatatggacacatactagaaagtcttataatctgaaacc 154
|||||||||| ||| ||||| ||| |||||| |||||||||||||||||| | ||||||
Sbjct: 72 atattcattagcatttatatgaatgtggaca-atactagaaagtcttatagtatgaaacg 14
Query: 155 gaggtagtag 164
|||| |||||
Sbjct: 13 gagggagtag 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctag 44
||||| ||||||| ||||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcatactataagactttctag 38
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagtag 164
||||||||||||||||| |||||| |||| |||||
Sbjct: 81 ctagaaagtcttataatatgaaacggaggaagtag 115
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 69.9 bits (35), Expect = 1e-11
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 81 acatatatgtgtctatattcattaacatctatataaatatggacacatactagaaagtct 140
|||||| ||||| || |||||||||||||||||| ||| ||| || || |||||||||||
Sbjct: 86 acatatgtgtgtatagattcattaacatctatatgaatgtgggca-attctagaaagtct 28
Query: 141 tataatctgaaaccgaggtagta 163
|||||| |||||| |||| ||||
Sbjct: 27 tataatatgaaacagagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 91/109 (83%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| |||| || ||||||||||||||||||||| ||| | || ||||||||| || ||
Sbjct: 5 tactccctctgtttcatattataagactttctagaatt-gcccacattcatatagatgtt 63
Query: 70 aatgaatct----aaacatatatgtgtctatattcattaacatctatat 114
||||||||| | |||||| ||||| || ||||||||||||||||||
Sbjct: 64 aatgaatctatacacacatatgtgtgtatagattcattaacatctatat 112
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||||||||||||||||||||||| | || ||||||||| || ||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcatt-gcccacattcatatagatgtt 68
Query: 70 aatgaatctaaacat 84
|||||||||| ||||
Sbjct: 67 aatgaatctagacat 53
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatctg 149
|||||| |||||||||||||||||| ||| ||| || || ||||||||||||||||| ||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggca-atgctagaaagtcttataatatg 112
Query: 150 aaaccgaggtagta 163
|||| |||| ||||
Sbjct: 113 aaacggaggaagta 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcatt 42
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 76/86 (88%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 32 taagactttctagcattatcacatattcatatatatttaa-tgaatctaaacatatat-- 88
|||||||||||||||| | |||| ||||||||| || ||| |||||||| ||||||||
Sbjct: 113 taagactttctagcatca-cacacattcatatagatgtaaatgaatctagacatatatat 55
Query: 89 gtgtctatattcattaacatctatat 114
||||||| ||||||||||||||||||
Sbjct: 54 gtgtctagattcattaacatctatat 29
Score = 54.0 bits (27), Expect = 6e-07
Identities = 74/86 (86%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 32 taagactttctagcattatcacatattcatatatat-ttaatgaatct--aaacatatat 88
|||||||||||||||| | | || ||||||||| || ||||||||||| | ||||||||
Sbjct: 2 taagactttctagcatca-cccacattcatatagatgttaatgaatctagacacatatat 60
Query: 89 gtgtctatattcattaacatctatat 114
|||||| ||||||| ||||||||||
Sbjct: 61 atgtctagattcatttacatctatat 86
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcatt 48
|||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1 ttactactccctccgtttcatattataagactttctagcatt 42
Score = 67.9 bits (34), Expect = 4e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
||||||||| || ||||||||||||||||||||||||| | || ||||||||| || ||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcatt-gcccacattcatatagatgtt 74
Query: 70 aatgaatctaaaca 83
||||||||||||||
Sbjct: 73 aatgaatctaaaca 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatc 147
||||| || |||||||||||||||||| ||| ||| || || |||||||||||||||||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggca-atgctagaaagtcttataata 116
Query: 148 tgaaaccgaggtagta 163
|||||| |||| ||||
Sbjct: 117 tgaaactgaggaagta 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagtag 164
||||||||||||||||| |||||| |||| |||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatcacatattcatatata- 66
||||||| ||||||| ||||||||||||||||||||||||| | || |||||||||||
Sbjct: 2 tactactccctccgtttcatattataagactttctagcatt-gcccacattcatatatac 60
Query: 67 tttaatgaatctaaacat 84
|||||||||||| ||||
Sbjct: 61 gttaatgaatctagacat 78
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||| | |||||||||||||||||||||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcatt 91
Score = 54.0 bits (27), Expect = 6e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatctg 149
|||||| |||||||||| | ||||| ||| ||| || || ||||||||||||||||| ||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggca-atgctagaaagtcttataatatg 19
Query: 150 aaaccgaggtagtag 164
|||| |||| |||||
Sbjct: 18 aaacggagggagtag 4
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcatt 42
Score = 54.0 bits (27), Expect = 6e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 97 attcattaacatctatataaatatggacacatactagaaagtcttataatctgaaaccga 156
|||| ||||||||||||| ||| ||| || || ||||||||||||||||| |||||| ||
Sbjct: 70 attcgttaacatctatatgaatgtgggca-atgctagaaagtcttataatatgaaacgga 12
Query: 157 ggtagta 163
|| ||||
Sbjct: 11 ggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||||||||||| |||||||||
Sbjct: 101 ctagaaagtcttataatctgaaatggaggtagta 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||| | ||| |||||||||||||||||||||
Sbjct: 134 tactacctccatttcagattataagactttctagcatt 97
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcatt 48
|||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1 ttactactccctccgtttcatattataagactttctagcatt 42
Score = 67.9 bits (34), Expect = 4e-11
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
||||||||| || ||||||||||||||||||||||||| | || ||||||||| || ||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcatt-gcccacattcatatagatgtt 74
Query: 70 aatgaatctaaaca 83
||||||||||||||
Sbjct: 73 aatgaatctaaaca 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatc 147
||||| || |||||||||||||||||| ||| ||| || || |||||||||||||||||
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggca-atgctagaaagtcttataata 116
Query: 148 tgaaaccgaggtagta 163
|||||| |||| ||||
Sbjct: 117 tgaaactgaggaagta 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagtag 164
||||||||||||||||| |||||| |||| |||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatcacatattcatatata- 66
||||||| ||||||| ||||||||||||||||||||||||| | || |||||||||||
Sbjct: 131 tactactccctccgtttcatattataagactttctagcatt-gcccacattcatatatac 73
Query: 67 tttaatgaatctaaacat 84
|||||||||||| ||||
Sbjct: 72 gttaatgaatctagacat 55
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||| | |||||||||||||||||||||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcatt 42
Score = 54.0 bits (27), Expect = 6e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatctg 149
|||||| |||||||||| | ||||| ||| ||| || || ||||||||||||||||| ||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggca-atgctagaaagtcttataatatg 114
Query: 150 aaaccgaggtagtag 164
|||| |||| |||||
Sbjct: 115 aaacggagggagtag 129
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| |||||||||||||||||||||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcatt 100
Score = 63.9 bits (32), Expect = 7e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatc 147
|||||||| ||| |||||||||||| | ||| |||||| || |||||||||||||||||
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggaca-atgctagaaagtcttataata 21
Query: 148 tgaaaccgaggtagta 163
|||||| |||| ||||
Sbjct: 20 tgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcatt 42
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 104 aacatctatataaatatggacacatactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||| ||| |||||| || ||||||||||||||||| |||||| |||| ||||
Sbjct: 79 aacatctatatgaatgtggaca-atgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| |||||||||||||||||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcatt 50
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagta 163
|||||||||||||||| ||||||| |||| ||||
Sbjct: 38 ctagaaagtcttataacctgaaacagagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||||| |||||| |||| ||||
Sbjct: 54 ctagaaagtcttataatatgaaacggaggaagta 87
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| |||||||||||||||||||||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcatt 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||||| |||||| |||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 ctagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||||| |||||| |||| ||||
Sbjct: 71 ctagaaagtcttataatatgaaacggaggaagta 104
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 82/96 (85%), Gaps = 3/96 (3%)
Strand = Plus / Minus
Query: 70 aatgaatctaaacatatat--gtgtctatattcattaacatctatataaatatggacaca 127
||||||||||||||||||| ||||||| |||||||||||| ||||| ||| ||| || |
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||| | | ||||||||||| ||||
Sbjct: 40 ggctagaaagtcttacattatgaaaccgaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 127/156 (81%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
||||||||| || ||||| | |||||||||||||| || | || |||||||||||| ||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagcctt-gcccacattcatatatatgtt 63
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacaca 127
||||||||| | ||| |||| ||| || ||||||| | |||||||| ||| ||| || |
Sbjct: 64 aatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||| ||||||||| | | ||||||||||| ||||
Sbjct: 123 tgctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 7e-10
Identities = 76/87 (87%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 32 taagactttctagcattatcacatattcatatatat-ttaatgaatctaaacata--tat 88
|||||||||||||||||| | || |||||| || || |||||||||||||||||| |||
Sbjct: 26 taagactttctagcattacc-cacattcatttagatgttaatgaatctaaacatatgtat 84
Query: 89 gtgtctatattcattaacatctatata 115
|||| || |||||||||||| ||||||
Sbjct: 85 gtgtttagattcattaacatatatata 111
Score = 44.1 bits (22), Expect = 6e-04
Identities = 87/105 (82%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatta-tcacatattcatatatat-t 68
|||| ||||||| ||| | | ||||||||| ||||||| ||||||| |||||||| |
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 69 taatgaatctaa--acatatatgtgtctatattcattaacatcta 111
|||||||||||| ||||| || ||| || |||||||||||||||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatcta 56
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 130/158 (82%), Gaps = 5/158 (3%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatcacatattcatatatat- 67
|||||||||||||| ||| | | ||||||||||||||||| | || || |||||| ||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcatt-gcccacatacatataaatg 61
Query: 68 ttaatgaatctaa--acatatatgtgtctatattcattaacatctatataaatatggaca 125
||||||||||||| ||||| || |||||| |||||||| |||||| || ||| ||| ||
Sbjct: 62 ttaatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggca 121
Query: 126 catactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||| | | |||||| |||| ||||
Sbjct: 122 -atgctagaaagtcttacattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 69 taatgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacac 126
||||||||||| |||||| |||||| || |||||||||||| ||||| || ||| ||
Sbjct: 100 taatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggca- 42
Query: 127 atactagaaagtcttataatctgaaaccgaggtagtag 164
|| ||||||||||||| | | |||||| |||| |||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 61.9 bits (31), Expect = 3e-09
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||| | | |||||||||||||||||||| || |||||| || || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatc-cacattcatttagatgtt 63
Query: 70 aatgaatctaaacatatat 88
|||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatat 82
Score = 54.0 bits (27), Expect = 6e-07
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 81 acatatatgtgtctatattcattaacatctatataaatatggacacatactagaaagtct 140
|||||||| |||||| ||||||||||||||| || ||| |||| | || |||||||||||
Sbjct: 86 acatatatatgtctagattcattaacatctaaatgaatgtggata-atgctagaaagtct 28
Query: 141 tataatctgaaaccgaggtagta 163
|| | | |||||| |||| ||||
Sbjct: 27 tacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 83/98 (84%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaa--catatatgtgtctatattcattaacatctatataaatatggaca 125
|||||||||||||| |||| || |||||| ||||||||||||||| || ||||||| ||
Sbjct: 101 ttaatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggca 42
Query: 126 catactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||| | | |||||| |||| ||||
Sbjct: 41 -atgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 128/156 (82%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||| | | ||||||||||||||||| | ||||||||| || || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcatt-gcccatattcatttagatgtt 63
Query: 70 aatgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| ||||| ||||| | || ||||||||||||| |||| | ||| || |
Sbjct: 64 aatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||||| | | |||||| |||| ||||
Sbjct: 123 tactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
|||||||||||| |||||||| |||||| ||||||||||||| ||||
Sbjct: 99 ttaatgaatctagacatatatatgtctacattcattaacatcaatat 53
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 68 ttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
||||||||| || |||||||| |||||| ||||||||||||| ||||
Sbjct: 62 ttaatgaatgtagacatatatatgtctagattcattaacatcaatat 108
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatata 64
|||| ||||||| ||||| |||||||||||||||||||| | ||||||||||||
Sbjct: 140 tactccctccgtttcataatataagactttctagcatta-cccatattcatata 88
Score = 58.0 bits (29), Expect = 4e-08
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatcacatattcatatatat 67
|||||||||||| || ||||| |||||| |||||||||||| | |||||||||||| ||
Sbjct: 2 tactacttcctctgtttcataatataagtctttctagcatt-gctcatattcatatagat 60
Query: 68 -ttaatgaatcta 79
||||||||||||
Sbjct: 61 gttaatgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 92 tctatattcattaacatctatataaatatggacacatactagaaagtcttataatctgaa 151
|||| |||||||||||||||||| |||||| || || |||||||| |||||| | ||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagca-atgctagaaagacttatattatgaa 17
Query: 152 accgaggtagtag 164
|| |||| |||||
Sbjct: 16 acagaggaagtag 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 92 tctatattcattaacatctatataaatatggacacatactagaaagtcttataatctgaa 151
|||| |||||||| ||||||||| ||||||| | || ||||||||||||||| | ||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggta-atgctagaaagtcttatattatgaa 128
Query: 152 accgaggtagta 163
|| |||| ||||
Sbjct: 129 acggagggagta 140
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 60.0 bits (30), Expect = 1e-08
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacacatactagaaagtctta 142
|||||||||| || ||||||||||||||||||| || ||| || || ||||||||||||
Sbjct: 55 atatatgtgtttagattcattaacatctatatatatgtgggca-atgttagaaagtctta 113
Query: 143 taatctgaaaccgaggtagtag 164
|| | | |||| ||||||||||
Sbjct: 114 tattgtaaaacggaggtagtag 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 cctccgtatcatattataagactttctagcatt 48
||||||| ||||| |||||||||||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagcatt 42
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatctg 149
|||||| |||||||||||||||||| ||| |||||| || ||||||||||||| | | ||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggaca-atgctagaaagtcttacattatg 118
Query: 150 aaaccgaggtagta 163
|||| |||| ||||
Sbjct: 119 aaacagagggagta 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| |||| || ||||| | ||||||||||||||||| || || ||||||||| || ||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtc-cacattcatatagatgtt 74
Query: 70 aatgaatctaaacat 84
|||||||||| ||||
Sbjct: 73 aatgaatctagacat 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||| | ||||| | |||||||||||||||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 129/157 (82%), Gaps = 5/157 (3%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||||||||||| ||| | | ||||||||| ||||||| | ||||||||| || || |
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcatt-gcccatattcatttagatgt 101
Query: 69 taatgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacac 126
||||||||||| ||||| ||||||| || |||||||||| ||||||| ||||| ||
Sbjct: 100 taatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagca- 42
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||| | | |||||| |||| ||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 129/157 (82%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | | ||||||||||||||||| | ||||| |||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattg-ctcatatacatatagacgtt 63
Query: 70 aatgaatctaaacatata--tgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||||||| ||| | |||||| ||||||||||||||| || ||||||| || |
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagtag 164
| ||| ||||||||| | | |||||| |||| |||||
Sbjct: 123 tgctaaaaagtcttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||| ||||||| ||| | |||||||||||||||||||| | || || |||||| || |
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcatta-cccacatacatatagatgt 79
Query: 69 taatgaatctaaacatat 86
||||||||||||||||||
Sbjct: 78 taatgaatctaaacatat 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacacatactagaaagtcttataatctgaaaccga 156
|||||||||||||||||| || ||| | || ||||||||||||||| | |||||| ||
Sbjct: 71 attcattaacatctatatgtatgtgggta-atgctagaaagtcttatattgtgaaacgga 129
Query: 157 ggtagtagaaa 167
|| ||||||||
Sbjct: 130 gggagtagaaa 140
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||| ||||||| ||| | |||||||||||||||||||| | || || |||||| || |
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcatta-cccacatacatatagatgt 62
Query: 69 taatgaatctaaacatat 86
||||||||||||||||||
Sbjct: 63 taatgaatctaaacatat 80
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 97 attcattaacatctatataaatatggacacatactagaaagtcttataatctgaaaccga 156
|||||||||||||||||| || ||| | || ||||||||||||||| | |||||| ||
Sbjct: 70 attcattaacatctatatgtatgtgggta-atgctagaaagtcttatattgtgaaacgga 12
Query: 157 ggtagtagaaa 167
|| ||||||||
Sbjct: 11 gggagtagaaa 1
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacacatactagaaagtctta 142
|||||| |||||| |||||||| ||||||||| ||| ||| || || ||||||||||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggca-atgatagaaagtctta 117
Query: 143 taatctgaaaccgaggtagta 163
|||| |||||| |||| ||||
Sbjct: 118 taatatgaaacggagggagta 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| |||||||||||||||||||| |||| | || ||||||||| || |
Sbjct: 138 tactccctccgtttcatattataagactttctatcatt-gcccacattcatatagatgct 80
Query: 70 aatgaatctaaacatatat 88
|||||||||| ||||||||
Sbjct: 79 aatgaatctagacatatat 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctag 44
|||||||||||| | ||||||||||||| |||||
Sbjct: 5 tacttcctccgttttatattataagactatctag 38
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 128/156 (82%), Gaps = 5/156 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | ||||||||||||||||| | || |||||||||||| |
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcatt-gcccacattcatatatatgct 100
Query: 70 aatgaatcta--aacatatatgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| ||| |||| |||||| |||||||| |||||||||||| ||| || |
Sbjct: 99 aatgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
||||||||||||| | | |||||| |||| ||||
Sbjct: 40 cgctagaaagtcttacattatgaaacagaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 81/97 (83%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 69 taatgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatggacac 126
||||||||||| |||||||||||| ||| |||||||| ||| ||||| ||| ||| ||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggca- 121
Query: 127 atactagaaagtcttataatctgaaaccgaggtagta 163
|| ||||||||||||| | | |||||| |||| ||||
Sbjct: 122 atgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatc 147
|||||||| ||| |||||||||||||| ||| |||||| || ||||||||||||| | |
Sbjct: 66 tgtgtctagatttattaacatctatatgaatgtggaca-atgctagaaagtcttacattg 124
Query: 148 tgaaaccgaggtagtag 164
|||||| |||| |||||
Sbjct: 125 tgaaacggagggagtag 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatata 64
|||| ||||||| ||| | | ||||||||| |||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatc-catattcatata 57
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 128/156 (82%), Gaps = 5/156 (3%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||| | | |||||||||||||||||| | || |||||| || | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacc-cacattcatttagttgtt 63
Query: 70 aatgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| |||| | || | | || |||||||||||||||||| ||||||||| |
Sbjct: 64 aatgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggaca-a 122
Query: 128 tactagaaagtcttataatctgaaaccgaggtagta 163
| ||||||||||||| | | |||||| |||| ||||
Sbjct: 123 tgctagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | | ||||||||||||||||| || ||||| |||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtc-catatacatatagatgtt 100
Query: 70 aatgaatctaaacatata 87
|||||||||||| |||||
Sbjct: 99 aatgaatctaaatatata 82
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 94/112 (83%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatcacatattcatatata 66
|||||||||||||||| ||| | | ||||||||| ||||||| || || ||| || || |
Sbjct: 160 ttactacttcctccgtttcacaatgtaagactttttagcattgtc-cacatttatttaga 102
Query: 67 t-ttaatgaatctaaacatat--atgtgtctatattcattaacatctatata 115
| |||||||||||| | |||| |||| |||| |||||||||||||||||||
Sbjct: 101 tattaatgaatctagatatatgtatgtttctagattcattaacatctatata 50
Score = 48.1 bits (24), Expect = 4e-05
Identities = 82/99 (82%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 68 ttaatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggaca 125
||||||||||| ||||||| || | |||| ||||||||| ||||| |||||| ||||||
Sbjct: 60 ttaatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggaca 119
Query: 126 catactagaaagtcttataatctgaaaccgaggtagtag 164
|| ||| ||||||||| | | |||||| |||| |||||
Sbjct: 120 -atgctaaaaagtcttacattgtgaaacggaggaagtag 157
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 85/101 (84%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 14 ttcctccgtatcatattataagactttctagcattatcacatattcatatatat-ttaat 72
||||||||| ||||| |||||| | |||||||||| | || ||||||||| || |||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcc-cacattcatatagatgttaat 66
Query: 73 gaatctaaacatatatgtgtctatattcattaacatctata 113
|||||| ||||||||||| ||| |||||||| |||||||
Sbjct: 67 gaatctggacatatatgtggctagattcattagtatctata 107
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 69 taatgaatctaaacatatatgtgtctatattcattaacatctatat 114
||||||||||| || |||| |||| | ||||||||||||||||||
Sbjct: 98 taatgaatctagccacatatatgtccagattcattaacatctatat 53
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatc 147
|||||||| |||||||||||||||||| ||| ||| || || ||||||||||||| | |
Sbjct: 79 tgtgtctaaattcattaacatctatatgaatgtgggca-atgctagaaagtcttacatta 21
Query: 148 tgaaaccgaggtagta 163
|||||| |||| ||||
Sbjct: 20 tgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcatt 105
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 130/159 (81%), Gaps = 5/159 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | | ||||||||||||||||| | | ||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcc-cgcattcatatagatgtt 100
Query: 70 aatgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacaca 127
|||||||||| | | |||||||||||| |||||||| ||||||| | ||| ||| || |
Sbjct: 99 aatgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggca-a 41
Query: 128 tactagaaagtcttataatctgaaaccgaggtagtagaa 166
| ||||||||||||| | | |||||| |||| |||||||
Sbjct: 40 tgctagaaagtcttacattatgaaacggaggaagtagaa 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcatt 48
||||||||||||| ||||| | |||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 56.0 bits (28), Expect = 2e-07
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||| | |||||| | || ||||||| || ||||||||||| || ||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatt-tcccatattcatattgatgtt 91
Query: 70 aatgaatctaaacatatatgtgtctatattcattaacatc 109
|||||||||| |||||||| | |||| |||||||||||||
Sbjct: 90 aatgaatctagacatatatctatctagattcattaacatc 51
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 68 ttaatgaatctaaacatatatgtgtctatattcattaacatctatataaatatgg 122
|||||||||||| | | |||| |||||| ||||||||||||| |||| |||||||
Sbjct: 55 ttaatgaatctagatagatatatgtctagattcattaacatcaatatgaatatgg 109
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatgg 122
|||||||| |||||||||||||||||| |||||||
Sbjct: 84 tgtgtctagattcattaacatctatatgaatatgg 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 89/107 (83%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | |||| | ||||||||||| | |||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcatta-cccatattcatatagatgtt 100
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatat 114
||||||||| | ||| || | | |||| ||||||||||||||||||
Sbjct: 99 aatgaatctagacacacatctatatctaaattcattaacatctatat 53
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 54.0 bits (27), Expect = 6e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtctta 142
|||||||| |||| ||||||||||||| ||| |||||| || |||||||||||||
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggaca-atgctagaaagtctta 87
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacacatactagaaagtcttataatctgaaaccga 156
|||||||||||||||||| ||| |||||| | ||||||||||||||| ||||||| ||
Sbjct: 74 attcattaacatctatatgaatgtggaca-gtgctagaaagtcttatagcctgaaacgga 132
Query: 157 ggtagta 163
|| ||||
Sbjct: 133 ggaagta 139
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 106 catctatataaatatggacacatactagaaagtcttataatctgaaaccgaggtagta 163
||||||||| |||||||||| | |||||||||||||||| ||||||| |||| ||||
Sbjct: 61 catctatatgaatatggacag-tgctagaaagtcttataacctgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatata 64
|||| ||||||| ||| |||||||||||||||||| | || ||||||||||||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtc-catattcatata 57
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | |||| |||||||||||| | || ||||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcatt-gcccacattcatatagatgtt 63
Query: 70 aatgaatctaaacatata 87
|||||||||| |||||||
Sbjct: 64 aatgaatctagacatata 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatctg 149
|||||| |||||||||||||||||| ||| ||| || || |||||||| |||| | | ||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggca-atgctagaaagacttacattatg 19
Query: 150 aaaccgaggtagta 163
|||| |||| ||||
Sbjct: 18 aaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacacatactagaaagtctta 142
||||||||||||||| |||||| |||||| ||||||||||| ||||
Sbjct: 53 attcattaacatctaaataaatgtggaca-atactagaaagcctta 97
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatata 64
||||||||| || ||||| |||||||||||| |||||| ||||||||||||||
Sbjct: 5 tacttcctctgtttcatactataagactttcaagcatt-gcacatattcatata 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatta 49
|||| ||||||| ||||| |||||||||||| |||||||
Sbjct: 130 tactccctccgtttcatactataagactttcaagcatta 92
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/49 (89%), Gaps = 2/49 (4%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaacatatatgtgt--ctatattcattaacatctatat 114
|||||||||||| | |||||||||| ||| ||||||||||||||||||
Sbjct: 101 ttaatgaatctagatatatatgtgtgtctagattcattaacatctatat 53
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa
Indica Group
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcatt 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcatt 48
|||||||||||||| ||| | | |||||||||||||||||
Sbjct: 136 actacttcctccgtttcacaatgtaagactttctagcatt 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacacatactagaaagtcttataatctg 149
|||||| ||| |||||||||||||| ||| ||| || || ||||||||||||| | | ||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggca-atgctagaaagtcttacattgtg 120
Query: 150 aaaccgaggtagtag 164
|||| |||| |||||
Sbjct: 121 aaacggaggaagtag 135
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
||||||||||| ||||| |||||||||||||||||||
Sbjct: 158 tacttcctccgcttcataatataagactttctagcatt 121
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaacatatatgtgtctatattcattaacat 108
|||||||||||| | |||||| |||||| ||||||||||||
Sbjct: 99 ttaatgaatctagatatatatatgtctaaattcattaacat 59
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 82 catatatgtgtctatattcattaacatctatat 114
||||||| |||||| ||||||||||||||||||
Sbjct: 52 catatatatgtctagattcattaacatctatat 84
Score = 46.1 bits (23), Expect = 2e-04
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||| | ||||| | |||| | |||||||||| |||| ||||||||| || ||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattg-cacacattcatatagatgtt 74
Query: 70 aatgaatctaaacatatat 88
|||||||||| ||||||||
Sbjct: 73 aatgaatctagacatatat 55
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 93/112 (83%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||| ||||||||||| | | |||| | |||||||||| || || |||||||| || |
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatt-tcccacattcatattgatat 101
Query: 69 taatgaatctaaaca--tatatgtgtctatattcattaacatctatataaat 118
||||||||||| | | ||||| |||||| ||||||||||||| ||||||||
Sbjct: 100 taatgaatctagatagatatatatgtctagattcattaacatcaatataaat 49
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 90/109 (82%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatcacatattcatatata 66
|||||||||||||||| ||| | | |||| | || ||||||| || || |||||| || |
Sbjct: 1 ttactacttcctccgtttcacaatgtaagtcattttagcatt-tcccacattcatgtaga 59
Query: 67 t-ttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
| |||||||||| | |||||||| || || ||||||||||||||||||
Sbjct: 60 tgttaatgaatcaagacatatatatgcatagattcattaacatctatat 108
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 56 attcatatatat-ttaatgaatctaaacatatatgtgtctatattcattaacatcta 111
||||||||| || |||||||||||| ||||||| ||||| |||||||||||||||
Sbjct: 112 attcatatagatgttaatgaatctatgcatatatatgtcttgattcattaacatcta 56
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcatta 49
|||||||||||||| || | ||||||||||||||||||||
Sbjct: 140 actacttcctccgttccacaatataagactttctagcatta 100
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/60 (88%), Gaps = 3/60 (5%)
Strand = Plus / Plus
Query: 56 attcatatatat-ttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
|||||||||||| |||||||||||| ||||||| | |||| |||||||||||| |||||
Sbjct: 15 attcatatatatgttaatgaatctagacatata--tatctagattcattaacatatatat 72
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/60 (88%), Gaps = 3/60 (5%)
Strand = Plus / Minus
Query: 56 attcatatatat-ttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
|||||||||||| |||||||||||| | |||||||| ||| |||||||||||| |||||
Sbjct: 76 attcatatatatgttaatgaatctagatatatatgt--ctagattcattaacatatatat 19
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 16 cctccgtatcatattataagactttctagcattatcacatattcatata 64
||||||| ||||| | |||||||||||||||||| | ||||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaac-catattcatata 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 88 tgtgtctatattcattaacatctatataaatatgg 122
|||||||| |||| ||||||||||||| |||||||
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatgg 45
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 93/112 (83%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||||||||||| ||| | |||||| | || ||||||| || || |||||||| ||| |
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatt-tcccacattcatatttatgt 62
Query: 69 taatgaatct--aaacatatatgtgtctatattcattaacatctatataaat 118
|||||||||| | | |||||| |||||| |||||||| |||| ||||||||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattatcatcaatataaat 114
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 50.1 bits (25), Expect = 1e-05
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 87 atgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataat 146
|||||| || |||||||||||||||||| ||| ||| || || ||||||||||||| | |
Sbjct: 65 atgtgtatagattcattaacatctatatgaatgtgggca-atgctagaaagtcttacatt 123
Query: 147 ctgaaaccgaggtagta 163
|||||| |||| ||||
Sbjct: 124 atgaaacggagggagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||| ||||| ||||| | |||||||||||||||||
Sbjct: 5 tacttcttccgtttcataatgtaagactttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcatt 103
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaacatatatgtgt-ctatattcattaacatctatat 114
||||||||||||||||||| | ||| ||| ||||||||||||| ||||
Sbjct: 100 ttaatgaatctaaacatatgtatgtgctagattcattaacatcaatat 53
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 83 atatatgtgtctatattcattaacatctatataaatatgg 122
|||||| |||||| ||||||||||||| |||| |||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgg 45
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcatt 48
|||||||||||||| ||| | | |||||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcatt 110
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||||||||||| ||| | |||||| | |||||||| |||| || |||||||| || |
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagca-tatcccacattcatattgatgt 75
Query: 69 taatgaatctaaacat 84
||||||||||||||||
Sbjct: 74 taatgaatctaaacat 59
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 98/119 (82%), Gaps = 4/119 (3%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatcacatattcatatatat 67
||||||||||||||| ||| | | |||| | |||||||||| || || |||||||| ||
Sbjct: 161 tactacttcctccgtttcacaatgtaagtcattctagcatt-tcccacattcatattgat 103
Query: 68 -ttaatgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatgga 123
|||||||||||| | | ||||| ||| || ||||||||||||| |||| ||||||||
Sbjct: 102 gttaatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatgga 44
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatgg 122
|||||| |||||| ||||||||||||| |||| |||||||
Sbjct: 77 atatatatgtctagattcattaacatcaatatgaatatgg 116
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 85 atatgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttata 144
|||||| |||| ||||||||||||| ||| |||| ||| || || ||||||||||||| |
Sbjct: 82 atatgtttctagattcattaacatccataaaaatgtgggca-atgctagaaagtcttaca 24
Query: 145 atctgaaaccgaggtagtag 164
| |||||| |||| |||||
Sbjct: 23 ttatgaaactgagggagtag 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||| | ||||| | |||||||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcatt 93
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 68/79 (86%), Gaps = 4/79 (5%)
Strand = Plus / Minus
Query: 39 ttctagcattatcacatattcatatatat-ttaatgaatctaaacatatatg--tgtcta 95
|||||||||| || || ||||||||| || || ||||||||||| |||||| ||||||
Sbjct: 130 ttctagcatt-tcccacattcatatagatgttgatgaatctaaatatatatagatgtcta 72
Query: 96 tattcattaacatctatat 114
||||||||||||||||||
Sbjct: 71 gattcattaacatctatat 53
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatat 114
|||||||| ||||||||||||||||||
Sbjct: 68 tgtgtctaaattcattaacatctatat 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||| ||||||| ||||| | |||| | |||||||||| || ||||||||||| || |
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatt-tctcatattcatattgatat 69
Query: 69 taatgaatctaaacatatatgtg 91
||||||||||||| ||| |||||
Sbjct: 68 taatgaatctaaatataaatgtg 46
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 66/78 (84%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 69 taatgaatctaaacat--atatgtgtctatattcattaacatctatataaatatggacac 126
|||||||||||||||| |||| | |||| |||||||| |||| |||| |||||||| |
Sbjct: 100 taatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatgga-aa 42
Query: 127 atactagaaagtcttata 144
||||||||| | ||||||
Sbjct: 41 atactagaatgacttata 24
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 88 tgtgtctatattcattaacatctatat 114
|||||||| ||||||||||||||||||
Sbjct: 79 tgtgtctagattcattaacatctatat 53
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatta 49
|||||||||||| ||||| | ||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcatta 43
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 46.1 bits (23), Expect = 2e-04
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||| ||||||| ||||| | |||| | |||||||||| || ||||||||||| || ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt-tctcatattcatattgatgtt 63
Query: 70 aatgaatctaaacatatat 88
|||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatat 82
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 83 atatatgtgtctatattcattaacatctatataaatatg 121
|||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatg 46
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 90 tgtctatattcattaacatctatataaatat 120
|||||| |||||||||||||||||| |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatat 47
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||| | | |||| | |||||||||| || || |||||||| ||| ||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatt-tcccacattcatatttatatt 77
Query: 70 aatgaatctaaacatatat 88
|||||||||| ||||||||
Sbjct: 76 aatgaatctagacatatat 58
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 92 tctatattcattaacatctatataaatatggacacatactagaaagtctta 142
|||| ||| |||||||||||||| ||| |||||| || |||||||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggaca-atgctagaaagtctta 26
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/46 (89%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 68 ttaatgaatctaaacata--tatgtgtctatattcattaacatcta 111
|||||||||||||||||| ||| |||||| ||| |||||||||||
Sbjct: 62 ttaatgaatctaaacatatgtatatgtctagatttattaacatcta 107
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-t 68
||||||||||||| ||||| |||||| | ||||| |||| || || |||||||| || |
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttc-cacattcatattgatgt 82
Query: 69 taatgaatctaaacatata 87
||||||||||| |||||||
Sbjct: 81 taatgaatctagacatata 63
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||| | ||||| | |||||||||||||||||
Sbjct: 5 tacttcctccatttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| ||| | | |||||||||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcatt 102
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/53 (86%), Gaps = 2/53 (3%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaaca--tatatgtgtctatattcattaacatctatataaat 118
|||||||||||||| | ||||| |||||| ||||||||||| | ||||||||
Sbjct: 101 ttaatgaatctaaatagatatatatgtctagattcattaacaccaatataaat 49
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
||||| |||||| ||||| | |||||||||||||||||
Sbjct: 5 tactttctccgtttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatcacatattcatatatat-tt 69
|||||||||||| ||||| | |||| | |||||||||| || ||||||||||| || ||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatt-tcccatattcatattgatgtt 82
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 81 aatgaatcta 72
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaaca--tatatgtgtctatattcattaacatctatat 114
|||||||||||||| | ||||| |||||| ||||||||||||| ||||
Sbjct: 75 ttaatgaatctaaatagatatatatgtctagattcattaacatcaatat 27
