miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 8e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 27 aagactttctagcattgtctacattcatatagatgttaatgaatc 71
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| ||||| |||||||||||||||||||||||||
Sbjct: 136 aagactttctaggtttgtccacattcatatagatgttaatgaatc 92
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 81.8 bits (41), Expect = 3e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||||| ||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 152 tccgtttcagattataagactttctagcattgcccacattcatatagatgttaatgaatc 93
Score = 54.0 bits (27), Expect = 8e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaa 71
||||||||| ||| |||||||| ||||||| | |||||||||||||||||||
Sbjct: 12 tccgtttcatattataagactttctagcattacccacattcatatagatgttaa 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||||||||||||| |||||
Sbjct: 123 atgctagaaagtcttataatctgaaa 148
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||||| || |||||||| ||||| |||| |||||||||||||||||||||||||
Sbjct: 132 tccgtttcaggctataagactttctagcactgtccacattcatatagatgttaatgaatc 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatg 67
|||||||||||||| |||||||| ||||| |||| | |||||||||||||
Sbjct: 12 tccgtttcaggttataagactttctagcactgtccatattcatatagatg 61
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 110 aagactttctagcattgtccacattcatatagatgttaatgaatc 66
Score = 58.0 bits (29), Expect = 5e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgt 68
|||||||| |||||||||| ||||||||||||||||
Sbjct: 27 aagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 12 tccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaatc 71
Score = 73.8 bits (37), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 153 tccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaatc 94
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 124 atgctagaaagtcttataatatgaaa 149
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| |||| |||||||| |||||||| | ||||||||||| |||||||||||||
Sbjct: 151 tccgtttcaagttataagactttctagcattgcccacattcatatatatgttaatgaatc 92
Score = 58.0 bits (29), Expect = 5e-08
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| |||| |||||||| | |||||| | ||||||||||| |||||||| ||||
Sbjct: 12 tccgtttcaagttataagactttctggcattgcccacattcatatatatgttaataaatc 71
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 119 tccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaatc 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 90 atgctagaaagtcttataatatgaaa 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||| |||||||||||||||
Sbjct: 41 atgctagaaaatcttataatatgaaa 16
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 110 aagactttctagcattgcccacattcatatagatgttaatgaatc 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 96 atgctagaaagtcttataatatgaaa 121
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| |||||| |||||||||||||||||||||||||
Sbjct: 136 aagactttttaggattgtccacattcatatagatgttaatgaatc 92
Score = 48.1 bits (24), Expect = 5e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaa 75
|||||||| ||| |||| | | |||||||||||||||||||||
Sbjct: 27 aagactttctagtattgcccatattcatatagatgttaatgaa 69
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| ||||||||||||||||||| |||||
Sbjct: 86 aagactttctagcattgtccacattcatatagatgttaacgaatc 42
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 134 aagactttctagcattgtccacattcatataaatgttaatgaatc 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| ||| |||||||| ||||||||||||||
Sbjct: 27 aagactttctagcattgcctatattcatattgatgttaatgaatc 71
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 118 aagactttctagcattgtccacattcatatagatgttaataaatc 74
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 110 aagactttctagcattgcccacattcatatagatgttaatgaatc 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 96 atgctagaaagtcttataatatgaaa 121
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 3 aagactttctagcattgtccacattcatatatatgttaatgaatc 47
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 112 aagactttctagcattgcccacattcatatagatgttaatgaatc 68
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 112 aagactttctagcattgcccacattcatatagatgttaatgaatc 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | | ||||||||| |||||||||||||
Sbjct: 3 aagactttctagcattgcccatattcatatatatgttaatgaatc 47
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| |||||| |||||||||||||||||||||||||
Sbjct: 27 aagactttttaggattgtccacattcatatagatgttaatgaatc 71
Score = 48.1 bits (24), Expect = 5e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaa 75
|||||||| ||| |||| | | |||||||||||||||||||||
Sbjct: 136 aagactttctagtattgcccatattcatatagatgttaatgaa 94
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 113 aagactttctagcattgtccacattcatatatatgttaatgaatc 69
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 99 atgctagaaagtcttataatatgaaa 124
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||| ||||
Sbjct: 41 atgctagaaagtcttataataagaaa 16
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 136 aagactttctagcattgcccacattcatatagatgttaatgaatc 92
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 27 aagactttttagcattcctcacattcatatagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 112 aagactttctagcattgcccacattcatatagatgttaatgaatc 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | ||||||||||| |||||||||||||
Sbjct: 3 aagactttctagcattgcccacattcatatatatgttaatgaatc 47
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 27 aagactttctagcattgtccacattcatatagatgttaataaatc 71
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatg 73
|||||||| |||||||| |||||||||||||||||||||||
Sbjct: 27 aagactttctagcattgcctacattcatatagatgttaatg 67
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 118 aagactttctagcattgcccacattcatatagatgttaatgaatc 74
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 27 aagactttctagcattgcccacattcatatagatgttaatgaatc 71
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 136 aagactttttagcattgctcacattcatatagatgttaatgaatc 92
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaat 76
|||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 27 aagactttctagcattgcccacattcatatagatgttaatgaat 70
Score = 50.1 bits (25), Expect = 1e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgt 68
|||||||| |||||||| | ||||||||||||||||
Sbjct: 120 aagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | ||||||||||||||||||| |||||
Sbjct: 12 tccgtttcatattataagactttctagcattgcccacattcatatagatgttaacgaatc 71
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaatgg 189
|||||||||||||||||||| ||||||||
Sbjct: 98 atgctagaaagtcttataatctgaaatgg 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 22 tttcaggttacaagactttntagcattgtctacattcatata 63
|||||| ||| |||||||| |||||||| | |||||||||||
Sbjct: 123 tttcagattataagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | ||||||||||||||| |||||||||
Sbjct: 151 tccgtttcatattataagactttctagcattgcccacattcatatagatgctaatgaatc 92
Score = 61.9 bits (31), Expect = 3e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaa 75
||||||||| ||| |||||||| |||||||| | ||| |||||||||||||||||||
Sbjct: 12 tccgtttcatattataagactttctagcattgcccacaatcatatagatgttaatgaa 69
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 122 atgctagaaagtcttataatatgaaa 147
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 2e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||||| ||||||| |||||||||||| ||||
Sbjct: 12 tccgtttcatattataagactttctagcattgtccacattcacatagatgttaataaatc 71
Score = 65.9 bits (33), Expect = 2e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgtt 69
||||||||| ||| |||||||| |||||||||| |||||||||||||||||
Sbjct: 130 tccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 101 atgctagaaagtcttataatatgaaa 126
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 60.0 bits (30), Expect = 1e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 36 actttntagcattgtctacattcatatagatgttaatgaat 76
||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 117 actttttagcattgcccacattcatatagatgttaatgaat 77
Score = 50.1 bits (25), Expect = 1e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgt 68
|||||||| |||||||| | ||||||||||||||||
Sbjct: 27 aagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| | ||| |||||||||||||||||||
Sbjct: 115 aagactttctagcattgtccatatttatatagatgttaatgaatc 71
Score = 46.1 bits (23), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgtta 70
|||||||| |||||||| | ||||| ||||||||||||
Sbjct: 27 aagactttctagcattgcccacatttatatagatgtta 64
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 60.0 bits (30), Expect = 1e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 37 ctttntagcattgtctacattcatatagatgttaatgaatc 77
|||| |||||||| | |||||||||||||||||||||||||
Sbjct: 31 ctttctagcattgcccacattcatatagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 37 ctttntagcattgtctacattcatatagatgttaatgaatc 77
|||| |||||||| | |||||||||||||||||||||||||
Sbjct: 31 ctttctagcattgcccacattcatatagatgttaatgaatc 71
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| || |||||| ||||||||||||||||
Sbjct: 134 aagactttgtagcattgcttatattcatctagatgttaatgaatc 90
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 27 aagactttctagcattatccacattcatttagatgttaatgaatc 71
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||||| | || ||||||||||||||||||||
Sbjct: 136 aagactttctagcattgtccatatacatatagatgttaatgaatc 92
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | |||||||| ||| ||||||||||||
Sbjct: 27 aagactttctagcattacccacattcatttagttgttaatgaatc 71
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| |||| | |||||||||||||||||||||||||
Sbjct: 136 aagactttctagtattgcccacattcatatagatgttaatgaatc 92
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 attcatatagatgttaatgaat 76
||||||||||||||||||||||
Sbjct: 49 attcatatagatgttaatgaat 70
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 136 aagactttctagcattgcccgcattcatatagatgttaatgaatc 92
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||| ||||||||||||||||||||
Sbjct: 125 aagactttctagcattgcccacatacatatagatgttaatgaatc 81
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| ||||||| ||||||||||||||||
Sbjct: 27 aagactttctagcattgctcacattcacttagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||| ||||
Sbjct: 112 aagactttctagcattgcccacattcatatagatgttaataaatc 68
Score = 46.1 bits (23), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagat 66
|||||||| ||||||||| ||||||||||||||
Sbjct: 27 aagactttctagcattgttcacattcatatagat 60
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||||||||| |||||||||
Sbjct: 41 atgctagaaagtcttacaatatgaaa 16
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 60.0 bits (30), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| |||| | |||||||||||||||||||||||||
Sbjct: 27 aagactttctagaattgcccacattcatatagatgttaatgaatc 71
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||||||||||||||||||
Sbjct: 118 acattcatatagatgttaatgaatc 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 164 ctagaaagtcttataatatgaaa 186
|||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatg 73
|||||||| ||||| ||| ||||||||||||||||||||||
Sbjct: 27 aagactttctagcactgtttacattcatatagatgttaatg 67
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 5e-08
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| || ||||| | ||||||||||||||| |||||||||
Sbjct: 131 tccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaatc 72
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 165 tagaaagtcttataatatgaaa 186
||||||||||||||||||||||
Sbjct: 106 tagaaagtcttataatatgaaa 127
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 5e-08
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | ||||||||||| | |||||||||||
Sbjct: 12 tccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaatc 71
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 92 atgctagaaagtcttataatatgaaa 117
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 58.0 bits (29), Expect = 5e-08
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| |||||||| | ||||||||||| | |||||||||||
Sbjct: 121 tccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaatc 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 92 atgctagaaagtcttataatatgaaa 117
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 58.0 bits (29), Expect = 5e-08
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| ||||||| | ||||||||||| |||||||||||||
Sbjct: 125 tccgtttcaaattataagactttctagcattacccacattcatatatatgttaatgaatc 66
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 164 ctagaaagtcttataatatgaaa 186
|||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaa 16
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||||||||||||| |||||
Sbjct: 96 atgctagaaagtcttataatttgaaa 121
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 35 gactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||| |||||||| | |||||||||| ||||||||||||||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatc 43
Score = 48.1 bits (24), Expect = 5e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 35 gactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||| || ||||| | |||||||||| ||||||||||||||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatc 70
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||||| |||||||||||||||||||| ||||
Sbjct: 106 tagcattgtccacattcatatagatgttaataaatc 71
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| |||||||||||||||||||||||
Sbjct: 127 tagcattgcctatattcatatagatgttaatgaatc 92
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||||| ||||||||||||||| |||||||||
Sbjct: 36 tagcattgtccacattcatatagatgctaatgaatc 71
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||| ||||||||||||||
Sbjct: 127 tagcattttccacattcatattgatgttaatgaatc 92
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| |||||||||||||||||||||||
Sbjct: 36 tagcattgcctatattcatatagatgttaatgaatc 71
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||| | |||||||||||||||||||||||||
Sbjct: 36 tagcattgcccacattcatatagatgttaatgaatc 71
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa
Japonica Group
Length = 160
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaat 76
||||||| ||||||||||||| |||||||||||||
Sbjct: 36 tagcattttctacattcatattgatgttaatgaat 70
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 8e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 32 caagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||||||| | |||||||| ||||||||||||||||
Sbjct: 26 caagactttctagcattacccacattcatttagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||| |||||| |||||||||||||
Sbjct: 27 aagactttctagcattgcccacatacatataaatgttaatgaatc 71
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| |||| ||||||||||||||||||||
Sbjct: 136 aagactttctagcattgctcacatacatatagatgttaatgaatc 92
Score = 50.1 bits (25), Expect = 1e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaat 76
|||||||| || |||| |||||||||| |||||||||||||||
Sbjct: 27 aagactttttaatattgcctacattcatttagatgttaatgaat 70
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 136 aagactttctagcattgcccacattcatatatatgctaatgaatc 92
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | |||||||| ||||||||||||||||
Sbjct: 27 aagactttctagcattacccacattcatttagatgttaatgaatc 71
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 78 atgctagaaagtcttataatatgaaa 103
Score = 48.1 bits (24), Expect = 5e-05
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaat 76
||||||||| ||| |||||||| ||||||| | | ||||||||||||| ||||||||
Sbjct: 107 tccgtttcatattataagactttctagcattacccatattcatatagatgataatgaat 49
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 165 tagaaagtcttataatatgaaa 186
||||||||||||||||||||||
Sbjct: 37 tagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| |||| | | |||||||||||||||||||||||
Sbjct: 136 aagactttctagtattgcccatattcatatagatgttaatgaatc 92
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 attcatatagatgttaatgaat 76
||||||||||||||||||||||
Sbjct: 49 attcatatagatgttaatgaat 70
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | | |||||| ||||||||||||||||
Sbjct: 136 aagactttttagcattgcccatattcatttagatgttaatgaatc 92
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| || ||||| | ||||||||||||||| |||||||||
Sbjct: 136 aagactttctaacattgcccacattcatatagatgctaatgaatc 92
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | ||||||||||||||| |||| ||||
Sbjct: 27 aagactttatagcattacccacattcatatagatgctaataaatc 71
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||| ||| | ||||||||||| |||||||||||||
Sbjct: 27 aagactttctagccttgcccacattcatatatatgttaatgaatc 71
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||| | ||||||||
Sbjct: 136 aagactttttagcattgcccacattcatatagatatcaatgaatc 92
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | |||| ||||||||||||||||||||
Sbjct: 114 aagactttctagcattacccacatacatatagatgttaatgaatc 70
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | |||| ||||||||||||||||||||
Sbjct: 27 aagactttctagcattacccacatacatatagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 78 atgctagaaagtcttataatatgaaa 103
Score = 50.1 bits (25), Expect = 1e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaat 76
|||||||| ||| |||||| ||||||||||| ||| ||||||||
Sbjct: 27 aagactttctagtattgtccacattcatataaatgctaatgaat 70
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | | |||||| ||||||||||||||||
Sbjct: 27 aagactttctagcattgcccatattcatttagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 51 atgctagaaagtcttataatatgaaa 76
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 27 aagacttcctagcattgctcacattcatatagatgttaatgaatc 71
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| || ||||| | ||||||| |||||||||||||||||
Sbjct: 136 aagactttttaacattgcccacattcacatagatgttaatgaatc 92
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 78 atgctagaaagtcttataatatgaaa 103
Score = 50.1 bits (25), Expect = 1e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatataga 65
||||||||| ||| |||||||| ||||||| || |||||||||||||
Sbjct: 12 tccgtttcatattataagactttatagcattatccacattcatataga 59
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||| |||||||||||||||||||
Sbjct: 41 atgctataaagtcttataatatgaaa 16
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
||||||||||||||||||||||||||
Sbjct: 68 atgctagaaagtcttataatatgaaa 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatata 63
||||||||| ||| |||||||| |||||||| | |||||||||||
Sbjct: 12 tccgtttcatattataagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||| ||| | |||||||| ||||||||||||||||
Sbjct: 27 aagactttgtagcgttgcccacattcatttagatgttaatgaatc 71
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 37 ctttntagcattgtctacattcatatagatgttaatgaatc 77
|||| ||| |||| | |||||||||||||||||||||||||
Sbjct: 31 ctttctagtattgcccacattcatatagatgttaatgaatc 71
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||||||||||||||||||||||
Sbjct: 136 aagactttctagcattgctcatattcatatagatgttaatgaatc 92
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||| | |||||||||||||||||||||||||
Sbjct: 3 aagactttctagcatcacccacattcatatagatgttaatgaatc 47
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||||||||||||||||||
Sbjct: 90 acattcatatagatgttaatgaatc 66
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| || ||||| | ||||||||||| |||| ||||||||
Sbjct: 12 tccgtttcatattataagactttctaacattgcccacattcatatatatgtcaatgaatc 71
Score = 50.1 bits (25), Expect = 1e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tccgtttcaggttacaagactttntagcattgtctacattcatatagatgttaatgaatc 77
||||||||| ||| |||||||| ||| |||||| | ||||||||||||| ||||||||
Sbjct: 151 tccgtttcatattataagactttctagaattgtccatcttcatatagatgtcaatgaatc 92
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 ctagaaagtcttataatatgaaa 186
|||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaa 147
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 165 tagaaagtcttataatatgaaa 186
||||||||||||||||||||||
Sbjct: 37 tagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||||||||||||||||||
Sbjct: 114 acattcatatagatgttaatgaatc 90
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||||||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||||||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatc 71
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaat 76
|||||||| |||| ||| | |||||||||||||| |||||||||
Sbjct: 92 aagactttctagcgttgcccacattcatatagatattaatgaat 49
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagat 66
|||||||||||||||||||||||||
Sbjct: 105 tagcattgtctacattcatatagat 81
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 acattcatatagatgttaatgaatc 77
|||||||||||||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatc 71
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||| ||||||||||||||
Sbjct: 109 tagcattttccacattcatattgatgttaatgaatc 74
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| |||||||||||| ||||||||||||||
Sbjct: 92 tagcatttcctacattcatattgatgttaatgaatc 57
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||| ||||||||||||||
Sbjct: 36 tagcattttccacattcatattgatgttaatgaatc 71
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||| ||||||||||||||
Sbjct: 36 tagcattttccacattcatattgatgttaatgaatc 71
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||| | ||||||||||||||| |||||||||
Sbjct: 127 tagcattgcccacattcatatagatggtaatgaatc 92
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||| | |||| ||||||||||||||||||||
Sbjct: 101 tagcattgcccacatgcatatagatgttaatgaatc 66
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||||| ||||||||||||
Sbjct: 127 tagcattttccacattcatataggtgttaatgaatc 92
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
|||||||| | ||||||||||| |||||||||||||
Sbjct: 89 tagcattgcccacattcatatatatgttaatgaatc 54
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||||| ||||||||||||
Sbjct: 6 tagcattttccacattcatataggtgttaatgaatc 41
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| || |||||||||| ||||||||||||||
Sbjct: 36 tagcattttccacattcatattgatgttaatgaatc 71
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaatc 77
||||||| |||| |||||||| ||||||||||||||
Sbjct: 36 tagcattttctatattcatattgatgttaatgaatc 71
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 attcatatagatgttaatgaatc 77
|||||||||||||||||||||||
Sbjct: 49 attcatatagatgttaatgaatc 71
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | | ||||||||||||| |||||||||
Sbjct: 118 aagactttctagcattacccatattcatatagatgctaatgaatc 74
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||||||||||| |||||||
Sbjct: 104 atgctagaaagtcttatattatgaaa 129
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaat 76
||||||| || ||||||||||||||| ||||||||
Sbjct: 127 tagcattttccacattcatatagatgctaatgaat 93
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 42 tagcattgtctacattcatatagatgttaatgaat 76
|||||||| | |||| |||||||||||||||||||
Sbjct: 36 tagcattgcccacatacatatagatgttaatgaat 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 55 attcatatagatgttaatgaatc 77
|||||||||||||||||||||||
Sbjct: 114 attcatatagatgttaatgaatc 92
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaat 76
||||||| |||||||||||| |||||||||||||
Sbjct: 83 tagcatttcctacattcatattgatgttaatgaat 49
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 42 tagcattgtctacattcatatagatgttaatgaat 76
||||||| ||||||||||||| |||| ||||||||
Sbjct: 115 tagcattttctacattcatattgatgctaatgaat 81
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 46.1 bits (23), Expect = 2e-04
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| || ||||||| |||| |||||||||||||||||||
Sbjct: 27 aagactttctaccattgtccacat--atatagatgttaatgaatc 69
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| || ||||| | ||||||||||||||| ||||||||
Sbjct: 115 aagactttctaacattgcccacattcatatagatgcaaatgaatc 71
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 7e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 37 ctttntagcattgtctacattcatatagatgttaatgaatc 77
|||| ||| |||||| ||||| || ||||||||||||||||
Sbjct: 92 ctttctagtattgtccacatttatttagatgttaatgaatc 52
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | ||||||| ||||| |||||||||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatc 97
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 161 atgctagaaagtcttataatatgaaa 186
|||||||||||||||||| |||||||
Sbjct: 41 atgctagaaagtcttatattatgaaa 16
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| || ||||| | |||| |||||||||||||||||||
Sbjct: 112 aagactttctaacattgcccacatatatatagatgttaatgaatc 68
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||||||| | | ||||||||||||||||| |||||
Sbjct: 27 aagactttctagcattaaccatattcatatagatgttaacgaatc 71
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | ||||| ||| ||||||||||||||
Sbjct: 27 aagactttctagcattgcccacatttttatggatgttaatgaatc 71
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| ||| ||| || ||||||| ||||||||||||||||
Sbjct: 27 aagactttatagtattacctccattcatttagatgttaatgaatc 71
Score = 44.1 bits (22), Expect = 7e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 33 aagactttntagcattgtctacattcatatagatgttaatgaatc 77
|||||||| |||||||| | |||| ||| ||||||||||| ||||
Sbjct: 136 aagactttctagcattgcccacatacatttagatgttaataaatc 92
