miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 125/143 (87%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| |||||||||||||||||||| |||| | | |||||||||||||| ||||||
Sbjct: 10 cctccgtttcatattataagactttctaacattgcccacattcatatatatgtcaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| |||||||| ||||| || ||||||| |||||||||| || ||||| ||| |||||
Sbjct: 70 tctagacatatatatgtgtttagattcattgacatctatatgaagatggacaattctaga 129
Query: 121 aagttttataatctgaaacggag 143
|||| ||||||| ||||||||||
Sbjct: 130 aagtcttataatatgaaacggag 152
Score = 117 bits (59), Expect = 4e-26
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||| ||| || || |||||||| |||| ||||||
Sbjct: 153 cctccgtttcatattataagactttctagaattgtccatcttcatatagatgtcaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||||||| |||| | |||||| ||||||| |||| ||||| ||| ||| ||| ||||
Sbjct: 93 tctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatgttaga 34
Query: 121 aagttttataatctgaaacggag 143
|||| ||||||| ||||||||||
Sbjct: 33 aagtcttataatatgaaacggag 11
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 139 bits (70), Expect = 1e-32
Identities = 127/145 (87%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctat--attcattaacatctatataaatatggataatacta 118
|||| | |||||||||||| ||| |||||||||||||||||| ||| ||| ||| |||
Sbjct: 70 tctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaatgcta 129
Query: 119 gaaagttttataatctgaaacggag 143
|||||| ||||||| ||||||||||
Sbjct: 130 gaaagtcttataatatgaaacggag 154
Score = 99.6 bits (50), Expect = 1e-20
Identities = 122/145 (84%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 155 cctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaa 96
Query: 61 tc--taaacatatatgtgtgtctatattcattaacatctatataaatatggataatacta 118
|| || ||| | || | | | || |||||||||||||||||| ||| ||| ||| |||
Sbjct: 95 tctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaatgcta 36
Query: 119 gaaagttttataatctgaaacggag 143
|||||| ||||||| ||||||||||
Sbjct: 35 gaaagtcttataatatgaaacggag 11
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 7e-31
Identities = 124/143 (86%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| |||||||||||||| || |||||||||||||||||| ||| |||| || |||||
Sbjct: 70 tctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaacctaga 129
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 130 aagtcttacattatgaaacggag 152
Score = 101 bits (51), Expect = 3e-21
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||| || || | ||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||||||| | || | |||||| |||||||||||||||||| ||| | || ||| |||||
Sbjct: 93 tctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatgctaga 34
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 33 aagtcttacattatgaaacggag 11
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 123/143 (86%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | ||||||||| ||| |||||||
Sbjct: 153 cctccgtttcatattataagactttctagcattgcccacattcatatagatgctaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| |||||||| ||||| || ||||||||||||||||| | | ||| ||| |||||
Sbjct: 93 tctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatgctaga 34
Query: 121 aagttttataatctgaaacggag 143
|||| ||||||| ||||||||||
Sbjct: 33 aagtcttataatatgaaacggag 11
Score = 117 bits (59), Expect = 4e-26
Identities = 122/143 (85%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | | ||||||| |||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacaatcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
||| ||| |||| | |||||| |||||||| ||||||||| ||| ||| ||| |||||
Sbjct: 70 cctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatgctaga 129
Query: 121 aagttttataatctgaaacggag 143
|||| ||||||| ||||||||||
Sbjct: 130 aagtcttataatatgaaacggag 152
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 123 bits (62), Expect = 7e-28
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 16 ataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgt 75
|||||||||||||||||| || | ||||||||||||||||||||||||| |||| |||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgt 60
Query: 76 gtgtctatattcattaacatctatataaatatggataatactagaaagttttat 129
||| ||| |||||||||||||||||| ||| ||| ||| ||||||||| ||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 95/114 (83%)
Strand = Plus / Minus
Query: 16 ataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgt 75
|||||||||||||||||| | | ||||||||| ||||||||||||||| || | ||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatac 55
Query: 76 gtgtctatattcattaacatctatataaatatggataatactagaaagttttat 129
|||||| |||||||||||| ||||| ||| |||| ||| ||||||||| ||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 96/108 (88%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||| ||| | ||||||||||| ||||||||||||||| ||||||||| |
Sbjct: 137 taagactttctagtattgcccatattcatatagatgttaatgaatctagacatatatgcg 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagt 124
|||||| |||||||||||||||||| ||||||| | |||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagt 30
Score = 85.7 bits (43), Expect = 1e-16
Identities = 106/127 (83%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||| | | | ||||||||||| |||||||||||| || ||| || |
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| |||||||||||||||||| ||||||| ||||||||||||| ||| | | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 110/127 (86%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||| ||| | | ||||||||| ||||||||||||||| ||||||||| |
Sbjct: 137 taagactttctagtattgcccacattcatatagatgttaatgaatctagacatatatgcg 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| |||||||||||||||||| ||||||| | ||||||||||| ||| | | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||| | | | ||||||||||| |||||||||||| || ||| || |
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| |||||||||||||||||| ||| ||| ||||||||||||| ||| | | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 90/101 (89%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatat 101
|||| | ||||||||||||||| ||||||||||||||||||
Sbjct: 93 tctagaaatatatgtgtgtctagattcattaacatctatat 53
Score = 77.8 bits (39), Expect = 4e-14
Identities = 117/143 (81%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||| ||||||| | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| ||| | || | | |||| |||||||||||||||||| ||| ||| ||| |||||
Sbjct: 70 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 129
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 130 aagtcttacattatgaaacggag 152
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 90/101 (89%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatat 101
|||| | ||||||||||||||| ||||||||||||||||||
Sbjct: 70 tctagaaatatatgtgtgtctagattcattaacatctatat 110
Score = 77.8 bits (39), Expect = 4e-14
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||| ||||||| | ||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| ||| | || | | |||| |||||||||||||||||| ||| ||| ||| |||||
Sbjct: 93 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 33 aagtcttacattatgaaacggag 11
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 111 bits (56), Expect = 3e-24
Identities = 123/144 (85%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaa-tga 59
||||||| |||||||||||||||||||||||||| | | ||||||||| ||||||| | |
Sbjct: 10 cctccgtttcatattataagactttctagcattacccacattcatatagatgttaaatta 69
Query: 60 atctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactag 119
||||| ||| || | | |||| |||||||||||||||||| ||| ||| ||| ||||
Sbjct: 70 atctagacacctacatatatctagattcattaacatctatatgaatgtgggcaatgctag 129
Query: 120 aaagttttataatctgaaacggag 143
||||| ||||||||||||||||||
Sbjct: 130 aaagtcttataatctgaaacggag 153
Score = 111 bits (56), Expect = 3e-24
Identities = 123/144 (85%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| ||||||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 154 cctccgtttcagattataagactttctagcattgcccacattcatatagatgttaatgaa 95
Query: 61 tctaaacatatatgtgtgtctatattca-ttaacatctatataaatatggataatactag 119
|||| | |||| | ||||||| ||| | ||||||||||||| ||| ||| |||| ||||
Sbjct: 94 tctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaatgctag 35
Query: 120 aaagttttataatctgaaacggag 143
||||| ||||||| ||||||||||
Sbjct: 34 aaagtcttataatatgaaacggag 11
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| |||||||| ||| | | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| |||||||| |||||||| |||||||||||||||||| |||||| ||| |||||
Sbjct: 70 tctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatgctaga 129
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 130 aagtcttacattatgaaacggag 152
Score = 109 bits (55), Expect = 1e-23
Identities = 106/123 (86%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| ||| |||| | |||||| |||||||||||||||||| ||| ||| |||||||||
Sbjct: 93 tctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 34
Query: 121 aag 123
|||
Sbjct: 33 aag 31
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 107 bits (54), Expect = 4e-23
Identities = 99/114 (86%)
Strand = Plus / Plus
Query: 16 ataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgt 75
|||||||||||||||||| | | ||||||||||||||||||||||||| | |||||| |
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 76 gtgtctatattcattaacatctatataaatatggataatactagaaagttttat 129
||| ||| |||||||||||||||||| ||| ||| ||| ||||||||| ||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 95/114 (83%)
Strand = Plus / Minus
Query: 16 ataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgt 75
|||||||||||||||||| | | ||||||||| ||||||||||||||| || |||| |
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Query: 76 gtgtctatattcattaacatctatataaatatggataatactagaaagttttat 129
| |||| |||||||||||| ||||| ||| ||| ||| ||||||||| ||||
Sbjct: 54 atatctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 120/143 (83%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| ||||||||||||||| ||| | ||||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
||| | ||||| | |||||| |||||||||||||||||| ||| |||| ||| ||| |
Sbjct: 70 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 129
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 130 aagtcttacattgtgaaacggag 152
Score = 101 bits (51), Expect = 3e-21
Identities = 108/127 (85%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||| ||| ||| || | ||||||||| ||||||||||||||| |||||| | |
Sbjct: 137 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatatgtata 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
| |||| ||||||||||||||||| ||||||| ||||||||||||| ||||| | |||
Sbjct: 77 tatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 120/143 (83%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| |||||||||||||| ||||| | | |||||||||||||||||| ||
Sbjct: 10 cctccgtttcaagttataagactttctggcattgcccacattcatatatatgttaataaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| |||||||| |||| | | |||||||||||| ||||| ||| ||| ||| |||||
Sbjct: 70 tctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaatgctaga 129
Query: 121 aagttttataatctgaaacggag 143
|||| |||||| ||||||||||
Sbjct: 130 aagtcttataacttgaaacggag 152
Score = 85.7 bits (43), Expect = 1e-16
Identities = 118/143 (82%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| |||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 153 cctccgtttcaagttataagactttctagcattgcccacattcatatatatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
||| || |||| | |||||| ||| |||||||| ||||| ||| ||| ||| | |||
Sbjct: 93 tcttggcacatatatatgtctagatttattaacatatatatgaatgtgggcaatgccaga 34
Query: 121 aagttttataatctgaaacggag 143
|||| |||||| ||||||||||
Sbjct: 33 aagtcttataacttgaaacggag 11
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| ||||||||||||||| ||| | ||||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
||| | ||||| | |||||| |||||||||||||||||| ||| |||| ||| ||| |
Sbjct: 93 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 34
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 33 aagtcttacattgtgaaacggag 11
Score = 101 bits (51), Expect = 3e-21
Identities = 108/127 (85%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||| ||| ||| || | ||||||||| ||||||||||||||| |||||| | |
Sbjct: 26 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatatgtata 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
| |||| ||||||||||||||||| ||||||| ||||||||||||| ||||| | |||
Sbjct: 86 tatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 16 ataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgt 75
|||||||||||||||||| | | ||||||||| ||||||||||||||| |||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgt 55
Query: 76 gtgtctatattcattaacatctatataaatatggataatactagaaagttttat 129
|| ||| |||||||||||| ||||| ||||||| ||| ||||||||| ||||
Sbjct: 54 atgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
Score = 99.6 bits (50), Expect = 1e-20
Identities = 98/114 (85%)
Strand = Plus / Plus
Query: 16 ataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgt 75
|||||||||||||||||| | ||||||||||||||||||||||||||| |||| || |
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 76 gtgtctatattcattaacatctatataaatatggataatactagaaagttttat 129
|| ||| |||||||||||||||||| ||| ||| ||| ||||||||| ||||
Sbjct: 61 atgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| |||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 127 cctccgtttcaaattataagactttctagcattacccacattcatatatatgttaatgaa 68
Query: 61 tctaaacatatat 73
|||| ||||||||
Sbjct: 67 tctagacatatat 55
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| |||||||||||| ||||| ||| ||| |||| ||||||||| ||||||| |||
Sbjct: 60 tgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttga 119
Query: 137 aacggag 143
|||||||
Sbjct: 120 aacggag 126
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgt 53
||||||| ||||||||||||||||||||| |||| | | ||||||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagtattacccacattcatatatatgt 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 92 acatctatataaatatggataatactagaaagttttataatctgaaacggag 143
|||| ||||| ||| ||| |||||||||||||| ||||||| ||||||||||
Sbjct: 62 acatatatatgaatgtgggtaatactagaaagtcttataatatgaaacggag 11
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcctatattcatattgatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
||| | |||||| ||||||| |||||||||||| ||||| ||| |||| ||| |||||
Sbjct: 70 tct--aggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgctaga 127
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 128 aagtcttacattatgaaacggag 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 151 cctccgtttcataatgtaagactttctagcattgtccacattcatataaatgttaatgaa 92
Query: 61 tcta 64
||||
Sbjct: 91 tcta 88
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 95.6 bits (48), Expect = 2e-19
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||||| | | ||||||||| |||| |||||||||| |||||||| ||
Sbjct: 113 taagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatg 54
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagt 124
|||||| |||||||||||||||||| ||| ||| | || |||||||||
Sbjct: 53 tgtctagattcattaacatctatatgaatgtgggtgatgctagaaagt 6
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||||| | | | ||||||||| ||||||||||||||| ||| |||| |
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatata 61
Query: 77 tgtctatattcattaacatctatat 101
|||||| ||||||| ||||||||||
Sbjct: 62 tgtctagattcatttacatctatat 86
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 107/127 (84%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| || |||| |||||| ||||||||||||||||| |||||
Sbjct: 137 taagactttctagcattgtccatatacatatagatgttaatgaatctaaatatatacaca 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| ||||||||||| ||| || ||| ||| |||| ||||||||| ||| | | |||
Sbjct: 77 tgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||||||| | | |||||| || |||||||||||||| |||| | | |
Sbjct: 26 taagactttctagcattacccacattcatttagttgttaatgaatctagacatgtgtata 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
| | || |||||||||||||||||| ||||||| ||| ||||||||| ||| | | |||
Sbjct: 86 tatttagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 86/99 (86%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | |||||| || |||||||||||
Sbjct: 10 cctccgtttcataatgcaagactttctagcattacccacattcatttagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| |||| | |||||| ||||||||||||||||
Sbjct: 70 tctaaacacatatatatgtctagattcattaacatctat 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatgg 109
||||||||||||||| |||||||| ||||| || ||||||||||||||| || ||| |||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgg 45
Query: 110 ataatactagaaagt 124
|||| |||||||||
Sbjct: 44 gtaatgctagaaagt 30
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||||||| | | |||||| || |||||||||||||||||||||| | ||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatg 85
Query: 77 tgtctatattcattaacatctatata 102
||| || |||||||||||| ||||||
Sbjct: 86 tgtttagattcattaacatatatata 111
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 44 atatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataa 103
||||||||||||||||||||||||| ||| | ||| || ||||||||||||||| || |
Sbjct: 110 atatatatgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatga 51
Query: 104 atatggataatactagaaagt 124
|| ||| |||| |||||||||
Sbjct: 50 atgtgggtaatgctagaaagt 30
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | |||||||||| | | || |||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
| || | ||| ||||||||||| |||||||||||||||||| ||||||| |||| |||||
Sbjct: 70 tttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctaga 129
Query: 121 a 121
|
Sbjct: 130 a 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | ||||||||||| | ||||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatat 101
|||| ||| | || | | |||| ||||||||||||||||||
Sbjct: 93 tctagacacacatctatatctaaattcattaacatctatat 53
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||| ||||||| | | ||||||||| || | ||||||||||||||||||||||
Sbjct: 137 taagactttttagcattgcccacattcatatagatatcaatgaatctaaacatatatgtg 78
Query: 77 tgtctatattcattaacatctatat 101
|||||| |||||||||||| |||||
Sbjct: 77 tgtctagattcattaacatatatat 53
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||| || | | ||||||||||||||||||||||||| ||| | || |
Sbjct: 26 taagactttctagccttgcccacattcatatatatgttaatgaatctagacacacatata 85
Query: 77 tgtctatattcattaacatctatat 101
||| || ||||||| | ||||||||
Sbjct: 86 tgtttagattcattgatatctatat 110
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 104/123 (84%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||| ||||||| |||||||| || |||||||||||
Sbjct: 151 cctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgttaatgaa 92
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| |||||| ||||||||| |||||||||||||||||| ||| ||| ||| |||||
Sbjct: 91 tctagacatat--gtgtgtctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 121 aag 123
|||
Sbjct: 33 aag 31
Score = 63.9 bits (32), Expect = 5e-10
Identities = 89/107 (83%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| |||||||||||| | | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatat 107
|||| ||| | | | |||||| ||||||||||||||| || |||||
Sbjct: 70 tctagacacaca--tatgtctagattcattaacatctagatgaatat 114
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 9 tcatattataagactttctagcattatcaatattcatatatatgttaatgaatcta 64
||||||||||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 122 tcatattataagactttctagcattgtccacattcatatatatgttaatgaatcta 67
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgtt 54
||||||| || ||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 10 cctccgtttcttattataagactttctagcattacccacattcatatatatgtt 63
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 68 atatatgtgtgtctatattcattaacatctatataaatatggataatactagaaagtttt 127
|||||||| |||||| |||||||||||| ||||| ||| |||| ||| ||||||||| ||
Sbjct: 55 atatatgt-tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtctt 113
Query: 128 ataatctgaaac 139
||||| ||||||
Sbjct: 114 ataatatgaaac 125
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 87.7 bits (44), Expect = 4e-17
Identities = 83/95 (87%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 9 tcatattataagactttctagcattatcaatattcatatatatgttaatgaatc--taaa 66
||||||||||||||||||||| ||| | | ||||||||| ||||||||||||| || |
Sbjct: 18 tcatattataagactttctagaattgcccacattcatatagatgttaatgaatctataca 77
Query: 67 catatatgtgtgtctatattcattaacatctatat 101
|| |||||||||| || ||||||||||||||||||
Sbjct: 78 cacatatgtgtgtatagattcattaacatctatat 112
Score = 85.7 bits (43), Expect = 1e-16
Identities = 88/102 (86%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacata--tatgtgtgtctatattcattaacatct 97
||||||||| ||||||||||||||| ||| | ||||||||| || ||||||||||||||
Sbjct: 116 attcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaacatct 57
Query: 98 atataaatatggataatactagaaagttttataatctgaaac 139
|||| ||| ||| ||| ||||||||| ||||||| ||||||
Sbjct: 56 atatgaatgtgggcaattctagaaagtcttataatatgaaac 15
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | ||||||||||| ||| ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatata 102
|||| ||| | || | | |||| |||||||||||||||||||
Sbjct: 70 tctagacacacatctatatctaaattcattaacatctatata 111
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 44 atatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatat 101
||||| |||||||||||| || | ||| ||||||||||| ||||||||||||||||||
Sbjct: 110 atatagatgttaatgaatttagatatagatgtgtgtctagattcattaacatctatat 53
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||| ||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 114 attcacatagatgttaatgaatctagatatatatgtgtgtctagattcattaacatctat 55
Query: 100 at 101
||
Sbjct: 54 at 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||| ||||||||||||||| ||| | || | | |||| ||||||||||||||||
Sbjct: 49 attcatatagatgttaatgaatctagacacacatatatatctagattcattaacatctat 108
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | ||||||||||| |||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaa 69
Query: 61 tctaaacat 69
|||| ||||
Sbjct: 70 tctagacat 78
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 9 tcatattataagactttctagcatt 33
|||||||||||||||||||||||||
Sbjct: 115 tcatattataagactttctagcatt 91
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| |||||||||||||||||||||||||| | ||||||||||| ||| |||||||
Sbjct: 109 cctccgtttcatattataagactttctagcattacccatattcatatagatgataatgaa 50
Query: 61 t 61
|
Sbjct: 49 t 49
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| |||||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctaacatt 42
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | ||||||||||| |||||||||
Sbjct: 123 cctccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaa 64
Query: 61 tctaaacat 69
|||| ||||
Sbjct: 63 tctagacat 55
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tcatattataagactttctagcatt 33
|||||||||||||||||||||||||
Sbjct: 18 tcatattataagactttctagcatt 42
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 121 cctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaa 62
Query: 61 tctaaacat 69
|||| ||||
Sbjct: 61 tctagacat 53
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| |||||||||||||||||| ||| ||| ||| ||||||||| ||||||| |||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatga 113
Query: 137 aacggag 143
|||||||
Sbjct: 114 aacggag 120
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| ||||||||||||| |||||||||||
Sbjct: 10 cctccgtttcatattataagattttctagcatt 42
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 9 tcatattataagactttctagcattatcaatattcatatatatgttaatgaatctaaaca 68
||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||
Sbjct: 119 tcatattataagactttctagcattgcccacattcatatagatgttaatgaatctaaaca 60
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 72 atgtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataa 131
|||||||| || |||||||||||||||||| ||| ||| ||| ||||||||| ||||||
Sbjct: 55 atgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 114
Query: 132 tctgaaac 139
| ||||||
Sbjct: 115 tatgaaac 122
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcatt 42
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| |||||||||||||||||||| | ||||||||||| ||| |||||||
Sbjct: 135 cctccgtttcataatataagactttctagcattacccatattcatatagatgctaatgaa 76
Query: 61 tcta 64
||||
Sbjct: 75 tcta 72
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 9 tcatattataagactttctagcattatcaatattcatatatatgttaatgaatcta 64
||||| |||||| |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 18 tcataatataagtctttctagcattgctcatattcatatagatgttaatgaatcta 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 79 tctatattcattaacatctatataaatatg 108
|||| |||||||||||||||||| ||||||
Sbjct: 75 tctagattcattaacatctatatgaatatg 46
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 38 atattcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatct 97
|||||||||| ||| |||||||||||||||||||| | | |||| |||||||| ||||
Sbjct: 116 atattcatattgatgctaatgaatctaaacatatatatctatctaaattcattagcatca 57
Query: 98 atataaatatggataatactagaa 121
|||| |||||||| ||||||||||
Sbjct: 56 atatgaatatggaaaatactagaa 33
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 9 tcatattataagactttctagcattatcaatattcatatatatgttaatgaatctaaaca 68
||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||
Sbjct: 119 tcatattataagactttctagcattgcccacattcatatagatgttaatgaatctaaaca 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 73 tgtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataat 132
||||||| || |||||||||||||||||| ||| ||| ||| ||||||||| |||||||
Sbjct: 56 tgtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataat 115
Query: 133 ctgaaac 139
||||||
Sbjct: 116 atgaaac 122
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcatt 42
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| | | || |||||| ||||||||||||||||||| ||| |
Sbjct: 26 taagactttctagcattgcccacatacatataaatgttaatgaatctaaacacatacata 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| |||||||| |||||| || ||| ||| ||| ||||||||| ||| | | |||
Sbjct: 86 tgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
Score = 69.9 bits (35), Expect = 9e-12
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| | | |||||| || ||| ||||||||||| |||||| | ||
Sbjct: 137 taagactttctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatg 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
||| || |||||||||||| ||||| || ||| ||| ||||||||| ||| | | |||
Sbjct: 77 tgtttagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| ||||||||||||||||||||||||||| ||| ||||||||| ||| | | |||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatga 124
Query: 137 aacggag 143
|||||||
Sbjct: 125 aacggag 131
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 2 ctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaat 61
|||||| ||||| | ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 62 ctaaacata 70
||| |||||
Sbjct: 71 ctagacata 63
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 90 taacatctatataaatatggataatactagaaagttttataatctgaaacggag 143
|||||||||||||||| ||| ||| ||||||||| ||| | | ||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||| ||||||| | |||||||| || ||||||||||||||| |||||| | ||
Sbjct: 137 taagactttttagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
||| || |||||||||| ||||||| ||||| ||| ||||||||| ||| | | |||
Sbjct: 77 tgtttagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| |||| |||||| | ||||||||||||||||| ||| |
Sbjct: 26 taagactttctagcattgctcatatacatatagacgttaatgaatctaaacacatacata 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| ||||||||||||||| || ||||||| ||| ||| ||||| ||| | | |||
Sbjct: 86 tgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||||||||||||||||| | | || |||||| |||||||||||
Sbjct: 131 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 72
Query: 61 tctaaacatat 71
|||||||||||
Sbjct: 71 tctaaacatat 61
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 84 attcattaacatctatataaatatggataatactagaaagttttataatctgaaacggag 143
|||||||||||||||||| || ||| |||| ||||||||| ||||| | ||||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 130
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||||||||||||||||| | | || |||||| |||||||||||
Sbjct: 10 cctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaa 69
Query: 61 tctaaacatat 71
|||||||||||
Sbjct: 70 tctaaacatat 80
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 84 attcattaacatctatataaatatggataatactagaaagttttataatctgaaacggag 143
|||||||||||||||||| || ||| |||| ||||||||| ||||| | ||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 11
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| | |||||||| || ||||||||||||||| |||||| | ||
Sbjct: 26 taagactttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
| | || ||||||||||||| |||| | ||| ||||||||||||| ||| | | |||
Sbjct: 86 tatttagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
Score = 67.9 bits (34), Expect = 3e-11
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatgg 109
||||||||||||||||| | ||| | |||||| ||||||||||||||| || |||||||
Sbjct: 104 atgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgg 45
Query: 110 ataatactagaaagttttataatctgaaacggag 143
||| ||||||||| ||| | | ||||||||||
Sbjct: 44 gcaatgctagaaagtcttacattgtgaaacggag 11
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||||||||| | |||||| || ||||||||||||||| |||||||| ||
Sbjct: 26 taagactttctagcattatccacattcatttagatgttaatgaatctagacatatatatg 85
Query: 77 tg 78
||
Sbjct: 86 tg 87
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| ||||||||||||||| || ||| |||||||| ||||||||| ||| | | |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || |||||||||| ||||||||||||||| |||||||| | | ||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaatctatacatatatatttatctag 92
Query: 84 attcattaacatctatat 101
||||||||||||| ||||
Sbjct: 93 attcattaacatcaatat 110
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| | | |||| | ||| || ||||||||||||| ||
Sbjct: 114 attcatattgatgttaatgaatctagataaatatatatgtatagattcattaacatcaat 55
Query: 100 ataaatatggataatactagaa 121
|| |||||||| ||| ||||||
Sbjct: 54 atgaatatggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| |||||||||||||||||||| |||| | | ||||||||| ||| |||||||
Sbjct: 133 cctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaa 74
Query: 61 tctaaacatatat 73
|||| ||||||||
Sbjct: 73 tctagacatatat 61
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | ||||||||||||| |||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaat 105
|||| || | || | |||||| |||||||| ||||||||||||
Sbjct: 93 tctaggcacacatatatgtctagattcattagtatctatataaat 49
Score = 69.9 bits (35), Expect = 9e-12
Identities = 104/127 (81%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||| || | | ||| ||||| || ||||||||||| |||||||||||
Sbjct: 26 taagactttctagcgttgcccacatttatatagatactaatgaatctagacatatatgtg 85
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|| ||| |||||||| ||| ||||| ||| ||| ||| ||||||||| ||| | | |||
Sbjct: 86 tgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatga 145
Query: 137 aacggag 143
|||||||
Sbjct: 146 aacggag 152
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | ||||||||| ||| |||||||| ||||||||||| || || ||
Sbjct: 130 ttctagcattttccacattcatatagatgctaatgaatttaaacatatatatgcgtatag 71
Query: 84 attcattaacatctatataaatat 107
|||||||| ||||||||| |||||
Sbjct: 70 attcattagcatctatatgaatat 47
Score = 60.0 bits (30), Expect = 9e-09
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
||||| |||| || ||||||||||| ||| ||||||||||| || |||| | ||| ||
Sbjct: 33 ttctaacattttctatattcatatagatgctaatgaatctatacgcatatatatgtttaa 92
Query: 84 attcattaacatctatataaatatggataatactagaa 121
|||||||| ||||||||| ||| |||| ||| ||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaa 130
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| | | ||||||||| ||||||| |||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacattcatatagatgttaacgaa 69
Query: 61 tcta 64
||||
Sbjct: 70 tcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 67 catatatgtgtgtctatattcattaacatctatataaatatggataatactagaaagttt 126
||||||||| || ||| |||| ||||||||||||| ||| ||| ||| ||||||||| |
Sbjct: 87 catatatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtct 28
Query: 127 tataatctgaaacggag 143
|||||| ||||||||||
Sbjct: 27 tataatatgaaacggag 11
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||||||||||||||||||||||| || | ||||| ||| |||||||| ||
Sbjct: 10 cctccgtttcatattataagactttctagcattgtccacattcacatagatgttaataaa 69
Query: 61 tcta 64
||||
Sbjct: 70 tcta 73
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgtt 54
||||||| ||||||||||||||||||||||||| || | ||||||||| |||||
Sbjct: 132 cctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 75 tgtgtctatattcattaacatctatataaatatggataatactagaaagttttataatct 134
|||||||| ||| |||||||||||| | ||| |||| ||| ||||||||| ||||||| |
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatat 20
Query: 135 gaaacggag 143
|||||||||
Sbjct: 19 gaaacggag 11
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 91 aacatctatataaatatggataatactagaaagttttataatctgaaacggag 143
||||||||||| ||| |||| ||| ||||||||| ||||||| ||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggag 131
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||||||||||||||||| | ||||||||||| ||||||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 61 tcta 64
||||
Sbjct: 70 tcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 75 tgtgtctatattcattaacatctatataaatatggataatactagaaagttttataatct 134
|||||||| |||| ||||||||||||| ||||||| |||| ||||||||| ||| | | |
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattat 20
Query: 135 gaaacggag 143
|||||||||
Sbjct: 19 gaaacggag 11
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | ||||| ||| ||| |||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| ||| |||| || | || |||||||||||||||||| ||| || ||| |||||
Sbjct: 70 tctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatgctaga 129
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 130 aagtcttacattgtgaaacggag 152
Score = 69.9 bits (35), Expect = 9e-12
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| | ||||||||| ||||||||||||||| | | ||| ||
Sbjct: 137 taagactttctagcattgcccgcattcatatagatgttaatgaatctatatacttatatg 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| |||||||| ||||||| | ||| ||| ||| ||||||||| ||| | | |||
Sbjct: 77 tgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| | || |||||| ||||||||||||||||||| || |
Sbjct: 137 taagactttctagcattgctcacatacatatagatgttaatgaatctaaacacgtacata 78
Query: 77 tgtctatattcattaacatcta 98
||||||||||||||||||||||
Sbjct: 77 tgtctatattcattaacatcta 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||| || |||||||||||| || |||||| | |||| || ||||||||||||||||
Sbjct: 49 attcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatctat 108
Query: 100 at 101
||
Sbjct: 109 at 110
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||| ||| |||||||||||||||||| | | | |||| ||||||||||||||||
Sbjct: 114 attcatatagatggtaatgaatctaaacatatgtctatatctagattcattaacatctat 55
Query: 100 at 101
||
Sbjct: 54 at 53
Score = 50.1 bits (25), Expect = 8e-06
Identities = 82/101 (81%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | ||||||| ||| | |||| |||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatat 101
|||| | ||| | | ||| || |||||||| |||||||||
Sbjct: 70 tctagatatagacatatgtttagattcattaccatctatat 110
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | |||||||| ||||||||||||||| || ||||| | || |||
Sbjct: 130 ttctagcattttccacattcatattgatgttaatgaatctagacttatatatatgcctag 71
Query: 84 attcattaacatctatataaatatggataatactagaa 121
|||||||| ||||||||| ||| |||| ||| ||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaa 33
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | ||||||||| ||| ||||||||||| ||||||| | |||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 84 attcattaacatctatataaatatggataatactagaa 121
||||||||||||| |||| ||| |||| ||| ||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaa 130
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatata 50
||||||| ||||| ||||||||||||||||||| || |||||||||||||
Sbjct: 100 cctccgtctcataatataagactttctagcattgtccatattcatatata 51
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||| ||||| ||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 114 attcatatagatgttgatgaatctaaatatatatagatgtctagattcattaacatctat 55
Query: 100 at 101
||
Sbjct: 54 at 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||| ||||||||||||||| |||| ||| | | | || |||||| |||||||||
Sbjct: 49 attcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatctat 108
Query: 100 at 101
||
Sbjct: 109 at 110
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||| | |||||||||| || |||||||||| ||| |||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| |||||||| | | |||| | ||||||||||| ||| ||| |||| ||| |||||
Sbjct: 93 tctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctaga 34
Query: 121 a 121
|
Sbjct: 33 a 33
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 71 tatgtgtgtctatattcattaacatctatataaatatggataatactagaaagttttata 130
|||||||||||| ||| |||||||||||||| ||| |||| ||| ||||||||| ||| |
Sbjct: 62 tatgtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttaca 121
Query: 131 atctgaaacggag 143
| ||||||||||
Sbjct: 122 ttgtgaaacggag 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatcta 64
||||||||||||||||| || | ||||||||| |||||||| ||||||
Sbjct: 119 taagactttctagcattgtccacattcatatagatgttaataaatcta 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgt 53
||||||||| |||||||||| ||||||||||| ||||
Sbjct: 26 taagactttttagcattatccatattcatatagatgt 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 92 acatctatataaatatggataatactagaaagttttataatctgaaacggag 143
|||||||||| |||||||||||| ||| ||||| ||| | | ||||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggag 11
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacat 69
||||||||||||||||| || | ||||||||| ||||||||||||||| ||||
Sbjct: 111 taagactttctagcattgtccacattcatatagatgttaatgaatctagacat 59
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagt 124
|||||| |||||||||||||||||| ||| |||| ||| |||||||||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatgctagaaagt 107
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | |||||||||| | ||||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatat 101
|||| ||||| | | | |||| ||||||||||||| ||||
Sbjct: 70 tctagacatagacatatatctagattcattaacatccatat 110
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| | |||| | | |||||| ||||||||||||||||
Sbjct: 114 attcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatctat 55
Query: 100 ataaatat 107
|| |||||
Sbjct: 54 atgaatat 47
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| |||||||||||| | | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaatgaa 69
Query: 61 tctaaacatata 72
|||| |||||||
Sbjct: 70 tctagacatata 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaag 123
|||||| |||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaag 31
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 63.9 bits (32), Expect = 5e-10
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||| |||| | | ||||||||| ||| |||||||||| |||||||||||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagt 124
|| ||| |||||||| ||| |||| ||| ||| ||| |||||||||
Sbjct: 56 tgcctagattcattagcatagatatgaatgtgggcaatgctagaaagt 9
Score = 50.1 bits (25), Expect = 8e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| | | |||||||| |||| ||||||||||| || | || |
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 77 tgtctatattcattaacatctatat 101
|||||| ||||||| |||||||||
Sbjct: 65 tgtctagattcatttgcatctatat 89
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| || | ||||||||| ||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 61 tcta 64
||||
Sbjct: 43 tcta 40
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 75 tgtgtctatattcattaacatctatataaatatggataatactagaaagttttataatct 134
|||||||| |||| ||||||||||||| ||| |||| ||| ||||||||| ||| | | |
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattat 93
Query: 135 gaaacggag 143
|||||||||
Sbjct: 94 gaaacggag 102
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatata 48
||||||| ||||||||||||||||| |||||||||| | |||||||||
Sbjct: 10 cctccgtttcatattataagactttatagcattatccacattcatata 57
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatc 36
||||||| ||||||||||||||||||||||||||||
Sbjct: 109 cctccgtttcatattataagactttctagcattatc 74
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| |||||||||||||||| | | |||| | |||||| |||||||| |||| ||
Sbjct: 49 attcatatttatgttaatgaatctagatagatatatatgtctagattcattatcatcaat 108
Query: 100 ataaatatggataatactagaaagttttataatctgaaacggag 143
|||||| || | ||| |||||| | ||||| | ||||||||||
Sbjct: 109 ataaatgtgaaaaatgctagaatggcttatattgtgaaacggag 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||| | |||||||||| | | ||| |||| ||| |||||||
Sbjct: 153 cctccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacat 95
|||| |||||||| | | |||| ||||||||||||
Sbjct: 93 tctagacatatatatctatctagattcattaacat 59
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||| || |||||||||||||||||||||| | | |||||| ||| |||||||||||
Sbjct: 49 attcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatctaa 108
Query: 100 ataaatatggataatactagaaagttttataatctgaaacggag 143
|| || ||| ||| ||||||||| ||| | | ||||||||||
Sbjct: 109 atgtatgtgggcaatgctagaaagtcttacattgtgaaacggag 152
Score = 54.0 bits (27), Expect = 5e-07
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||||||||||| | | || ||| || |||||||| |||||| ||||||| |
Sbjct: 137 taagactttctagcattgcccacatacatttagatgttaataaatctagacatatacata 78
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
||| || ||||||||||||||| || ||| | |||||||| ||||| ||| | | |||
Sbjct: 77 tgtttagattcattaacatctaaatgaatggaggtaatactataaagtcttacattgtga 18
Query: 137 aacggag 143
|||||||
Sbjct: 17 aacggag 11
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 135 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 76
Query: 61 tcta 64
||||
Sbjct: 75 tcta 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 75 tgtgtctatattcattaacatctatataaatatggataatactagaaagttttataatct 134
||||| || |||||||||||||||||| ||| ||| ||| ||||||||| ||| | | |
Sbjct: 66 tgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattat 125
Query: 135 gaaacggag 143
|||||||||
Sbjct: 126 gaaacggag 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 3 tccgtatcatattataagactttctagcattatcaatattcatatatatgttaatg 58
||||| ||||| | ||||||||||||||||| | | ||||||||| |||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaatg 67
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 63.9 bits (32), Expect = 5e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| |||||| | |||||||||| | | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 61 tctaaacatatatgtg 76
||| |||||||||||
Sbjct: 70 tctggacatatatgtg 85
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 73 tgtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataat 132
|||||||||| |||||||||||||||||| ||| ||| ||| ||| ||||||||| | |
Sbjct: 66 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacatt 125
Query: 133 ctgaaacggag 143
||||||||||
Sbjct: 126 atgaaacggag 136
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 73 tgtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataat 132
|||||||||| |||||||||||||||||| ||| ||| ||| ||||||||| ||| | |
Sbjct: 81 tgtgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatt 22
Query: 133 ctgaaacggag 143
||||||||||
Sbjct: 21 atgaaacggag 11
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | ||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaatgaa 69
Query: 61 t 61
|
Sbjct: 70 t 70
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||| | | | ||||||||| ||||||||| |
Sbjct: 10 cctccgtttcataatgtaagactttctagcactgtttacattcatatagatgttaatgga 69
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctat 99
|||| ||| || |||||||| ||||||| ||||||||
Sbjct: 70 tctatacacttacatgtgtctagattcattgacatctat 108
Score = 50.1 bits (25), Expect = 8e-06
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 9 tcatattataagactttctagcattatcaatattcatatatatgttaatgaatctaaaca 68
||||| ||||||||||||||||||| | | |||| ||| |||| |||||||||| |||
Sbjct: 145 tcataatataagactttctagcattgcccacgttcacatagatgtcaatgaatctagaca 86
Query: 69 tatatgtgtgtctatattcattaacatctatat 101
|| | |||| || || |||||||||||||||
Sbjct: 85 catgtaagtgtatagatccattaacatctatat 53
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | |||||||| ||||||||||||||| |||||||| | | ||||
Sbjct: 130 ttctagcattctccacattcatattaatgttaatgaatctagacatatatatctatctag 71
Query: 84 attcattaaca 94
|||||||||||
Sbjct: 70 attcattaaca 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 51 tgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatgga 110
|||||||||||||| | | |||| | |||||| |||||||||||| |||| ||| ||||
Sbjct: 60 tgttaatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtgga 119
Query: 111 taatactagaa 121
||| ||||||
Sbjct: 120 gaatgctagaa 130
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 60.0 bits (30), Expect = 9e-09
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| |||||||||||||||||||||| | |||| ||| ||||||||||||| ||
Sbjct: 113 attcatattgatgttaatgaatctaaacatatgtatgtg-ctagattcattaacatcaat 55
Query: 100 at 101
||
Sbjct: 54 at 53
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||| |||||||||||||| | |||||| |||||| ||||||||||| ||||
Sbjct: 49 attcatataggtgttaatgaatctagatatatatagatgtctagattcattaacacctat 108
Query: 100 ataaatatggataatactagaa 121
|| ||| |||| ||| ||||||
Sbjct: 109 atgaatgtggaaaatgctagaa 130
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | ||||||||| |||||||||||||| |||| ||| | | ||||
Sbjct: 130 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 71
Query: 84 attcattaacatctatat 101
||||||||||| ||||||
Sbjct: 70 attcattaacacctatat 53
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatat 73
||||||||||||||||||||||||| ||||||||
Sbjct: 15 attcatatatatgttaatgaatctagacatatat 48
Score = 58.0 bits (29), Expect = 3e-08
Identities = 54/62 (87%), Gaps = 4/62 (6%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||||||||||||||||||| | ||||| |||||| |||||||||||| |||
Sbjct: 76 attcatatatatgttaatgaatctagatatata----tgtctagattcattaacatatat 21
Query: 100 at 101
||
Sbjct: 20 at 19
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| |||||||| | | |||| ||||||||||||| ||
Sbjct: 88 attcatattgatgttaatgaatctagacatatatatctatctagattcattaacatcaat 29
Query: 100 at 101
||
Sbjct: 28 at 27
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| | | |||| | |||||| ||||||||||||| ||
Sbjct: 23 attcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcaat 82
Query: 100 at 101
||
Sbjct: 83 at 84
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 82 atattcattaacatctatataaatatggataatactagaaagttttataatctgaaacgg 141
|||||||||| ||| ||||| ||| |||| ||||||||||||| ||||| | ||||||||
Sbjct: 72 atattcattagcatttatatgaatgtggacaatactagaaagtcttatagtatgaaacgg 13
Query: 142 ag 143
||
Sbjct: 12 ag 11
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| ||||||||||||||| ||| || | ||||||||| ||| |||||||
Sbjct: 10 cctccgtttcatactataagactttctagtattgtccacattcatataaatgctaatgaa 69
Query: 61 t 61
|
Sbjct: 70 t 70
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| |||||||||||||||||||||||||
Sbjct: 109 cctccgtttcatattataagactttctagcatt 77
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| |||||||| | ||| ||||||||||||| ||
Sbjct: 114 attcatattaatgttaatgaatctagacatatatatccaactagattcattaacatccat 55
Query: 100 ataaatatggataatactagaa 121
|| ||||||| |||| ||||||
Sbjct: 54 atgaatatgggtaatgctagaa 33
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatcta 64
||||||||||| | |||||||||| |||||||||||||||
Sbjct: 33 ttctagcattacccatattcatatggatgttaatgaatcta 73
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||| |||||||||||||| | |||||| |||||| ||||||||||| ||||
Sbjct: 84 attcatataggtgttaatgaatctagatatatatagatgtctagattcattaacacctat 25
Query: 100 ataaatatggataatactagaa 121
|| ||| |||| ||| ||||||
Sbjct: 24 atgaatgtggaaaatgctagaa 3
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | ||||||||| |||||||||||||| |||| ||| | | ||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 84 attcattaacatctatat 101
||||||||||| ||||||
Sbjct: 63 attcattaacacctatat 80
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| | |||||||||| ||||||||||||||| | | |||| |||||||
Sbjct: 33 ttctagcatttcctatattcatattgatgttaatgaatctagatagatatagatgtctat 92
Query: 84 attcattaacatctatat 101
||||||||||||| ||||
Sbjct: 93 attcattaacatcaatat 110
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| |||||||||||| || |||| ||| | | |||| ||||||||||||| ||
Sbjct: 114 attcatattgatgttaatgaatatagacatctatatctatctagattcattaacatcaat 55
Query: 100 ataaatat 107
|| |||||
Sbjct: 54 atgaatat 47
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 60.0 bits (30), Expect = 9e-09
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
||||||||| ||||||| || | ||| || || || |||||||||||| | |||| | ||
Sbjct: 135 taagactttttagcattgtccacatttatttagatattaatgaatctagatatatgtatg 76
Query: 77 tgtctatattcattaacatctatata 102
| |||| |||||||||||||||||||
Sbjct: 75 tttctagattcattaacatctatata 50
Score = 56.0 bits (28), Expect = 1e-07
Identities = 115/143 (80%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||||||||||| |||| || | || ||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctaccattgtccacat--atatagatgttaatgaa 67
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||| | | ||| | | |||| ||||||||| ||||| |||||| |||| ||| ||| |
Sbjct: 68 tctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatgctaaa 127
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 128 aagtcttacattgtgaaacggag 150
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||||| | |||| | |||||| ||||||||||||| ||
Sbjct: 88 attcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacatcaat 29
Query: 100 at 101
||
Sbjct: 28 at 27
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| |||||||| | | | || ||||||||||||| ||
Sbjct: 23 attcatattgatgttaatgaatctagacatatatatctatttagattcattaacatcaat 82
Query: 100 at 101
||
Sbjct: 83 at 84
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 86/105 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||||||| | | |||| | |||||||||| | | |||||||| || ||||||||
Sbjct: 153 cctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaat 105
|||| | | |||| | |||||| ||||||||||||| ||||||||
Sbjct: 93 tctagatagatatatatgtctagattcattaacatcaatataaat 49
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatat 101
||||||||||||||| |||||||| | | |||| ||||||||| ||| ||||
Sbjct: 59 atgttaatgaatctagacatatatatctatctagattcattaatatcaatat 110
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | |||||||||| | ||||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatat 101
|||| | ||| | | | |||| ||||||||||||| ||||
Sbjct: 93 tctagatatagacatatatctagattcattaacatccatat 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| | |||| | | | |||| ||||||||||||||||
Sbjct: 49 attcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatctat 108
Query: 100 ataaatat 107
|| |||||
Sbjct: 109 atgaatat 116
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| |||||||||||||||||||||||||
Sbjct: 82 cctccgtttcatattataagactttctagcatt 50
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcatt 42
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| |||||||||||||||||||||||||
Sbjct: 99 cctccgtttcatattataagactttctagcatt 67
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 27 tagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctatatt 86
|||||||| | | |||||||| ||||||||||||||| |||||||| | | |||| |||
Sbjct: 36 tagcattacccacattcatattgatgttaatgaatctagacatatatatctatctagatt 95
Query: 87 cattaacat 95
|||||||||
Sbjct: 96 cattaacat 104
Score = 54.0 bits (27), Expect = 5e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| | | |||| | |||||| ||||||||||||| ||
Sbjct: 114 attcatattaatgttaatgaatctagatagatatatatgtctagattcattaacatcaat 55
Query: 100 ataaatatggataat 114
|| ||| ||| ||||
Sbjct: 54 atgaatgtgggtaat 40
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 38 atattcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatct 97
|||||||||| ||||||||||||||| |||||||| | | | || ||| |||||||||
Sbjct: 47 atattcatattgatgttaatgaatctagacatatatatctatatagatttattaacatca 106
Query: 98 atataaat 105
||||||||
Sbjct: 107 atataaat 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatgg 109
|||||||| |||||| | | |||| | |||||| ||||||||||||| |||| |||||||
Sbjct: 104 atgttaataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgg 45
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 84 attcattaacatctatataaatatggataatactagaaag 123
||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 53 attcattaacatctaaataaatgtggacaatactagaaag 92
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| | | || |||||| |||||||||||
Sbjct: 142 cctccgtttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaa 83
Query: 61 tcta 64
||||
Sbjct: 82 tcta 79
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 38 atattcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatct 97
|||||||||| ||||||||||||||| |||||||| | | | || ||| |||||||||
Sbjct: 114 atattcatattgatgttaatgaatctagacatatatatctatatagatttattaacatca 55
Query: 98 atataaat 105
||||||||
Sbjct: 54 atataaat 47
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatgg 109
|||||||| |||||| | | |||| | |||||| ||||||||||||| |||| |||||||
Sbjct: 57 atgttaataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgg 116
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 15 tataagactttctagcattatcaatattcatatatatgttaatgaatc 62
||||||||||||||||| | || | ||||||||| |||||||||||||
Sbjct: 120 tataagactttctagcactgtccacattcatatagatgttaatgaatc 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 84 attcattaacatctatataaatatggataatactagaaagttttataatctgaaacggag 143
|||||||||||||||||| ||| |||| | | ||||||||| ||||| |||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacggag 133
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 93 catctatataaatatggataatactagaaagttttataatctgaaacggag 143
||||||||| |||||||| | | ||||||||| |||||| |||||||||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataacctgaaacggag 11
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatata 48
||||||| ||| |||||||||||||||||| | || |||||||||||
Sbjct: 10 cctccgtttcaggttataagactttctagcactgtccatattcatata 57
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatcta 64
||||||||||||||||| || | ||||||||| |||||||| ||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgttaataaatcta 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 79 tctatattcattaacatctatataaatatggataatactagaaagt 124
|||| ||| |||||||||||||| ||| |||| ||| |||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagt 30
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| |||||| | ||||| |||| || | |||||||| |||||||||||
Sbjct: 134 cctccgtttcataatataagtcattctaacattttccacattcatattgatgttaatgaa 75
Query: 61 tctaaacatata 72
|||| |||||||
Sbjct: 74 tctagacatata 63
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaat 105
||||| ||||||||| |||||||| | | |||| ||||||||||||| ||||||||
Sbjct: 59 atgtttatgaatctagacatatatttctatctagattcattaacatcaatataaat 114
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||| | |||||||||| || | |||||||| |||||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaa 76
Query: 61 tctaaacatat 71
|||| ||||||
Sbjct: 75 tctatacatat 65
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 15 tataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatg 74
|||||| | |||||||||| | | |||||||| || |||||||||||||| | ||||
Sbjct: 139 tataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagatata 80
Query: 75 tgtgtctatattcattaacatctatataaat 105
| |||||| ||||||||||| | ||||||||
Sbjct: 79 tatgtctagattcattaacaccaatataaat 49
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatat 71
||||||||||||||||| | | ||||||||| |||||||| |||||| ||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaataaatctagacatat 59
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| ||||||| |||||||||||||||||
Sbjct: 10 cctccgtttcatattgtaagactttctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|||||| ||| |||||||||||||| ||| ||| ||| ||||||||| ||| | | |||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtga 121
Query: 137 aacggag 143
|||||||
Sbjct: 122 aacggag 128
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatc 96
||||||||||||||| |||||||| | | |||| |||||||||||||
Sbjct: 108 atgttaatgaatctagacatatatatctatctagattcattaacatc 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatc 96
||||||||||||||| | | |||| | |||||| |||||||||||||
Sbjct: 63 atgttaatgaatctagatagatatatatgtctagattcattaacatc 109
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 5e-07
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | |||||||| |||||||||||| || ||||||| | ||||||
Sbjct: 33 ttctagcattttctacattcatattgatgttaatgaatgtagacatata--tatgtctag 90
Query: 84 attcattaacatctatat 101
||||||||||||| ||||
Sbjct: 91 attcattaacatcaatat 108
Score = 54.0 bits (27), Expect = 5e-07
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| ||||||| | |||||| ||||||||||||| ||
Sbjct: 112 attcatattgatgttaatgaatctagacatata--tatgtctacattcattaacatcaat 55
Query: 100 at 101
||
Sbjct: 54 at 53
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 51 tgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatat 101
|||||||||||||| |||||||| | | |||| ||||||||||||| ||||
Sbjct: 103 tgttaatgaatctagacatatatatctatctagattcattaacatcaatat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | || ||||| ||||||||||||||| | | |||| | ||||||
Sbjct: 33 ttctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtctag 92
Query: 84 attcattaacatctatataaatatggataatactagaa 121
||||||||||| | |||| ||| ||| ||||||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaa 130
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatat 73
||||||||| ||||||||||||||| ||||||||
Sbjct: 88 attcatatagatgttaatgaatctagacatatat 55
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgt 53
||||||| ||||| | |||| | ||||||||||| | ||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattacctatattcatatatatgt 62
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| || |||||||||||| |||||||| | | |||| ||||||||||||| ||
Sbjct: 114 attcatattgatattaatgaatctagacatatatatctatctagattcattaacatcaat 55
Query: 100 at 101
||
Sbjct: 54 at 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatgg 109
||||||||||||||| | | |||| | |||||| ||||||||| ||| |||| ||| |||
Sbjct: 59 atgttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgg 118
Query: 110 ataatactagaaagttttataatctgaaacggag 143
|||||||||| || ||| | | ||||||||||
Sbjct: 119 gaaatactagaatgtcttacattgtgaaacggag 152
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| || |||||||||||| | | |||| | |||||| ||||||||||||| ||
Sbjct: 48 attcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaat 107
Query: 100 ataaatatggataatactagaa 121
|| ||| |||| |||| |||||
Sbjct: 108 atgaatgtggaaaatattagaa 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| |||||||| | | |||| ||||||||| ||| ||
Sbjct: 113 attcatattgatgttaatgaatctagacatatatatctatctagattcattaatatcaat 54
Query: 100 at 101
||
Sbjct: 53 at 52
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctat 83
|||||||||| || | |||||| | || |||||||||||| |||||||| | | ||||
Sbjct: 130 ttctagcattttctaaattcatgttgatattaatgaatctagacatatatatctatctag 71
Query: 84 attcattaacatctatat 101
||||||||||||| ||||
Sbjct: 70 attcattaacatcaatat 53
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| || |||||||||||| |||||||| | | |||| ||||||||| ||| ||
Sbjct: 49 attcatattgatattaatgaatctagacatatatatctatctagattcattaaaatcaat 108
Query: 100 ataaatatggataatactagaa 121
|| ||| || | ||||||||||
Sbjct: 109 atgaatgtgaaaaatactagaa 130
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| | | |||| | |||||| ||||||||||||| ||
Sbjct: 49 attcatattgatgttaatgaatctagatagatatatatgtctacattcattaacatcaat 108
Query: 100 at 101
||
Sbjct: 109 at 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| |||||||||||| || |||||||| | | |||| ||||||||||||| ||
Sbjct: 114 attcatattgatgttaatgaatgtagacatatatatctatctagattcattaacatcaat 55
Query: 100 at 101
||
Sbjct: 54 at 53
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatcta 64
|||||||||| || |||||||||| |||||||||||||||
Sbjct: 117 ttctagcattttccatattcatattgatgttaatgaatcta 77
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 78 gtctatattcattaacatctatataaatatggataatactagaa 121
||||| ||||||||||||| |||| |||||||| ||| ||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaa 117
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcatt 33
||||||| ||||| |||||||||||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagcatt 42
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 68 atatatgtgtgtctatattcattaacatctatataaatatggataatactagaaagtttt 127
|||||| ||||| || ||||||||||||||||||| || ||| ||| |||||||| ||
Sbjct: 53 atatatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtctt 112
Query: 128 ataatctgaaacggag 143
||| | | ||||||||
Sbjct: 113 atattgtaaaacggag 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 15 tataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatat 73
|||||||||||||| |||| | | || ||||| ||||||||||||||||||| ||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgttaatgaatctaaacacatat 57
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||| | || ||||||| | |||||||||| |||||||||||
Sbjct: 144 cctccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaa 85
Query: 61 tctaaacatatat 73
|||| ||||||||
Sbjct: 84 tctagacatatat 72
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 50.1 bits (25), Expect = 8e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | |||||||||| |||||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaa 69
Query: 61 tctaaacatatat 73
|||| ||||||||
Sbjct: 70 tctagacatatat 82
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatc 96
|||||||| || |||||||||||||| | |||| | |||||| |||||||||||||
Sbjct: 114 attcatattgatattaatgaatctaaatagatatatatgtctagattcattaacatc 58
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 80/98 (81%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | ||||||||||| ||||| || | | || |||| | |||||||||||
Sbjct: 149 cctccgtttcacaatataagactttttagcactacccacatacataaagatgttaatgaa 90
Query: 61 tctaaacatatatgtgtgtctatattcattaacatcta 98
|||||| | ||| |||||| |||||||||||||||
Sbjct: 89 tctaaatacata----tgtctagattcattaacatcta 56
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatcta 64
|||||||||| || |||||||||| |||||||||||||||
Sbjct: 33 ttctagcattttctatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatcta 64
|||||||||| || |||||||||| |||||||||||||||
Sbjct: 106 ttctagcattttccatattcatattaatgttaatgaatcta 66
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | |||||||||| || | |||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Query: 61 tcta 64
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | |||||||||| || | |||||||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Query: 61 tcta 64
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/59 (86%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatcta 98
||||||||| ||||||||||||||| |||||| | ||||| |||||||||||||||
Sbjct: 112 attcatatagatgttaatgaatctatgcatata--tatgtcttgattcattaacatcta 56
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatat 71
|||||||| ||||||||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctaaacatat 80
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | |||| | |||||||||| | |||||||||| |||||||||||
Sbjct: 135 cctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 76
Query: 61 tcta 64
||||
Sbjct: 75 tcta 72
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||| | |||||||||| | | |||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 61 tctaaacatatatgtgtgtctatattcattaacat 95
|||| | |||||| | | |||| ||||||||||||
Sbjct: 93 tctagatatatatatttatctagattcattaacat 59
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatat 71
||||||||||||||||| || |||||| || |||||| |||||||||||||||
Sbjct: 118 taagactttctagcattgccac-attcatttagatgttattgaatctaaacatat 65
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaaca 94
|||||||| ||| ||||||||||| |||||||| | | |||| |||||||||||
Sbjct: 114 attcatattgatggtaatgaatctagacatatatatctatctagattcattaaca 60
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatata 72
|||||||||||||||||||||||
Sbjct: 59 atgttaatgaatctaaacatata 81
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 2 ctccgtatcatattataagactttctagcattatcaatattcatata 48
|||||| ||||| | ||||||||||||||||| | |||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcatata 57
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 79 tctatattcattaacatctatataaatatggataatactagaa 121
|||| |||||||| |||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaa 33
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||| | |||||| | |||||||||| | | |||||||| |||||||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 76
Query: 61 tctaaacatat 71
|||| ||||||
Sbjct: 75 tctatacatat 65
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 84 attcattaacatctatataaatatggataatactagaa 121
||||||||| ||| ||||||||||||| ||| ||||||
Sbjct: 81 attcattaatatcaatataaatatggaaaatgctagaa 118
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaac 93
|||||||| || |||||||||||| |||||||| | | |||| ||||||||||
Sbjct: 49 attcatattgatattaatgaatctagacatatatatctatctagattcattaac 102
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||||| ||||||||||||| | | |||| | |||||| ||||||||| ||| ||
Sbjct: 114 attcatatattagttaatgaatctagatagatatatatgtctagattcattaatatcaat 55
Query: 100 at 101
||
Sbjct: 54 at 53
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 15 tataagactttctagcattatcaatattcatatatatgttaatgaatcta 64
|||||| | |||||||||| | |||||||||| |||||||||||||||
Sbjct: 127 tataagtcattctagcatttactatattcatattgatgttaatgaatcta 78
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatat 73
|||||||| ||||||||||||||| ||||||||
Sbjct: 114 attcatattgatgttaatgaatctagacatatat 81
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatat 73
|||||||| ||||||||||||||| ||||||||
Sbjct: 49 attcatattgatgttaatgaatctagacatatat 82
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 84 attcattaacatctatataaatatggataatactagaa 121
||||||||||||| |||| |||||||| ||| ||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaa 33
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaat 61
|||||||||| || |||||||||| ||||||||||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcatta 34
||||||| ||||| |||||||||||| |||||||
Sbjct: 125 cctccgtttcatactataagactttcaagcatta 92
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 15 tataagactttctagcattatcaatattcatatatatgttaatgaatcta 64
|||||| | |||||||||| | |||||||||| |||||||||||||||
Sbjct: 24 tataagtcattctagcatttactatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacat 69
|||||||| ||||||||||||||||||||
Sbjct: 88 attcatattgatgttaatgaatctaaacat 59
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 66 acatatatgtgtgtctatattcattaacatctatataaatatggataatactagaaagtt 125
|||||||| | | |||| |||||||| |||| ||||||||||| |||||||||| |
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 126 ttataatctgaaacggag 143
||||| | ||||||||||
Sbjct: 28 ttatattgtgaaacggag 11
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatat 73
|||||||| ||| |||||||||||| ||||||||
Sbjct: 91 attcatatttatattaatgaatctagacatatat 58
