miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 107 bits (54), Expect = 3e-23
Identities = 86/96 (89%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgtgggcaa 74
||||||||| |||||||||||||||| |||||||| ||||||| ||||| | ||||||||
Sbjct: 9 ccctccgtttcatattataagactttctagcattgcccacattcatataaacgtgggcaa 68
Query: 75 tgccataaagtcttacaatatgaaaacggaggaagt 110
||| | ||||||||| |||||| |||||||||||||
Sbjct: 69 tgctagaaagtcttataatatg-aaacggaggaagt 103
Score = 99.6 bits (50), Expect = 8e-21
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgtgggcaat 75
|||||||| |||||||||||||||| |||||||| |||| ||||||| |||||||||||
Sbjct: 99 cctccgtttcatattataagactttctagcattgcccacgtttatatgaatgtgggcaat 40
Query: 76 gccataaagtcttacaatatgaaa 99
|| | ||||||||| |||||||||
Sbjct: 39 gctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 1e-16
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 132 cctccgtttcatattataagactttctagcattgtccacattcatatagatgt 80
Score = 79.8 bits (40), Expect = 7e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 9 ccctccgtttcatattataagactttctagcattgtccacattcacatagatgt 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
|||||| |||||| | ||||||||| ||||||||| ||||||||||
Sbjct: 92 atgtggacaatgctagaaagtcttataatatgaaa-cggaggaagt 136
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 79.8 bits (40), Expect = 7e-15
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 156 ccctccgtttcatattataagactttctagcattgcccacattcatatagatgt 103
Score = 77.8 bits (39), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||| |||||| |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatg-aaacggaggaagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||| |||||||||
Sbjct: 115 atgtgggcaatgctagaaagtcttataatatgaaa 149
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 77.8 bits (39), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||| |||||| |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatg-aaacggaggaagt 6
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatata 63
||||| || || ||||||||||||| |||||||| ||||||| |||||
Sbjct: 129 cctccatttcagattataagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 121 cctccgtttcatattataagactttctagcattgcccacattcatatagatgt 69
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatt 57
||||||||| |||||||||||| ||| |||||||| |||||||
Sbjct: 9 ccctccgtttcatattataagattttctagcattgcccacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||| |||||| |||||||||||||
Sbjct: 81 atgtgggcaatgctagaaagtcttataatatg-aaacggaggaagt 125
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatg 67
|||||||| |||||||||||||||| |||||||| ||||||| |||||||||
Sbjct: 153 cctccgtttcatattataagactttctagcattgcccacattcatatagatg 102
Score = 71.9 bits (36), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||||||||||||||| |||||||| ||||| | ||||||||||
Sbjct: 9 ccctccgtttcatattataagactttctagcattgcccacaatcatatagatgt 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||| |||||| |||||||||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttataatatg-aaacggaggaagt 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 66 tgtgggcaatgccataaagtcttacaatatgaaa 99
|||||||||||| | ||||||||| |||||||||
Sbjct: 49 tgtgggcaatgctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 75.8 bits (38), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatata 63
|||||||| |||||||||||||||| ||||||| ||||||||||||||
Sbjct: 109 cctccgtttcatattataagactttctagcattatccacatttatata 62
Score = 73.8 bits (37), Expect = 5e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatataga 65
||||||||| |||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 9 ccctccgtttcatattataagactttatagcattatccacattcatataga 59
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||| | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 104 ccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgt 51
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 71.9 bits (36), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 9 ccctccgtttcatattataagactttctagcattacccacattcatatagatgt 62
Score = 71.9 bits (36), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || ||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 155 ccctccgtttcagattataagactttctagcattgcccacattcatatagatgt 102
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 69.9 bits (35), Expect = 7e-12
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||| ||| |||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 127 cctcagtttcatattataagactttctagcattgcccacattcatatagatgt 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatt 57
||||||||| |||||||||||||||| |||||||| |||||||
Sbjct: 9 ccctccgtttcatattataagactttctagcattgcccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||| |||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaa 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||| |||||||||
Sbjct: 87 atgtgggcaatgctagaaagtcttataatatgaaa 121
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 7e-12
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatg 67
||||||||| |||||||||||||||| || ||||| ||||||| |||||||||
Sbjct: 134 ccctccgtttcatattataagactttctatcattgcccacattcatatagatg 82
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatata 63
|||||||| ||||||||||||| | ||| |||| ||||||| |||||
Sbjct: 10 cctccgttttatattataagactatctagtattgcccacattcatata 57
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 69.9 bits (35), Expect = 7e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatata 63
||||||||| |||||||||||||||| |||||||| ||||||| |||||
Sbjct: 9 ccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtcca 53
||||| || |||||||||||||||| ||||||||||||
Sbjct: 123 cctccttttcatattataagactttctagcattgtcca 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||| |||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 69.9 bits (35), Expect = 7e-12
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||| ||| |||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 127 cctcagtttcatattataagactttctagcattgcccacattcatatagatgt 75
Score = 65.9 bits (33), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatt 57
||||||||| |||||||||||||||| |||||||| |||||||
Sbjct: 9 ccctccgtttcatattataagactttctagcattgcccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||| |||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaa 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||| |||||||||
Sbjct: 87 atgtgggcaatgctagaaagtcttataatatgaaa 121
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 69.9 bits (35), Expect = 7e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatata 63
||||||||| |||||||||||||||| |||||||| ||||||| |||||
Sbjct: 124 ccctccgtttcatattataagactttctagcattgcccacattcatata 76
Score = 56.0 bits (28), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtcca 53
||||| || |||||||||||||||| ||||||||||||
Sbjct: 10 cctccttttcatattataagactttctagcattgtcca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||| |||||||||
Sbjct: 83 atgtgggcaatgctagaaagtcttataatatgaaa 117
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 7e-12
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||| ||| |||||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 130 cctctgtttcatattataagactttctagcattgtccacattcatatatatgt 78
Score = 54.0 bits (27), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| | |||||||||||||| ||||||| ||||||| ||||| ||||
Sbjct: 10 cctccgtttcttattataagactttctagcattacccacattcatatatatgt 62
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa
Indica Group
Length = 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 17 ctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||| |||| | ||||||||| |||||||| ||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacatttatatagatgt 62
Score = 67.9 bits (34), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 17 ctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||| |||| | ||||||||| |||||||||||| ||||||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgt 80
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 53 acatttatatagatgtgggcaatgccataaagtcttacaatatgaaa 99
|||| |||||| ||||||||||||| | ||||||||||| |||||||
Sbjct: 62 acatctatataaatgtgggcaatgctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 65.9 bits (33), Expect = 1e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgtg 69
||||||||| |||| | ||||||||| |||||||| ||||||| |||||||||||
Sbjct: 9 ccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtg 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 52 cacatttatatagatgtgggcaatgccataaagtcttacaatatgaaa 99
||||| ||||| ||||||||||||| | ||||||||||| |||||||
Sbjct: 63 cacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 65.9 bits (33), Expect = 1e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgtg 69
||||||||| |||| | ||||||||| |||||||| ||||||| |||||||||||
Sbjct: 138 ccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtg 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 52 cacatttatatagatgtgggcaatgccataaagtcttacaatatgaaa 99
||||| ||||| ||||||||||||| | ||||||||||| |||||||
Sbjct: 84 cacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||||| |||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 65.9 bits (33), Expect = 1e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgtg 69
||||||||| |||| ||||||||||| |||||||| |||||| |||||| |||||
Sbjct: 9 ccctccgtttcataatataagactttctagcattgcccacatctatatatatgtg 63
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 52 cacatttatatagatgtgggcaatgccataaagtcttacaatatgaaa 99
||||| |||||||||||||||||||| | ||||||||| | |||||||
Sbjct: 63 cacatatatatagatgtgggcaatgctagaaagtcttatattatgaaa 16
Score = 48.1 bits (24), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 30 tataagactttntagcattgtccacatttatatagatgt 68
||||||||||| || ||||| |||||| |||||||||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgt 77
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||||||||||||||| ||| |||||||| || ||||||||||
Sbjct: 154 ccctccgtttcatattataagactttctagaattgtccatcttcatatagatgt 101
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||||||||||||||| || ||||| ||||||| ||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctaacattgcccacattcatatatatgt 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
|||||||||||| | ||||||||| |||||| |||||||||||||
Sbjct: 50 atgtgggcaatgttagaaagtcttataatatg-aaacggaggaagt 6
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || | | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 136 ccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgt 83
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 4e-10
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||| ||| |||| | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 128 ccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgt 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||| || |||| | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 10 cctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
|||||| |||||| | ||||||||||| |||||||| |||||||||
Sbjct: 50 atgtggacaatgctagaaagtcttacattatgaaaa-ggaggaagt 6
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 63.9 bits (32), Expect = 4e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||| ||| |||||||||||||||| ||| |||| ||||||| ||||||||||
Sbjct: 9 ccctctgtttcatattataagactttctagaattgcccacattcatatagatgt 62
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 63.9 bits (32), Expect = 4e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||| || |||| | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 9 ccctccatttcataatgtaagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||| | ||||||||| |||||||||||||||| ||||| ||||
Sbjct: 151 cctccgtttcataatgtaagactttctagcattgtccacattcatataaatgt 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 53 acatttatatagatgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
|||||||||| |||||| |||||| | ||||||||||| |||| |||||||||||||
Sbjct: 99 acatttatatgaatgtggacaatgctagaaagtcttacattatg-aaacggaggaagt 155
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatata 63
||||||||| |||| ||||||||||| ||| |||||||||||| |||||
Sbjct: 9 ccctccgtttcatactataagactttctagtattgtccacattcatata 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattg 49
|||||||| |||||||||||||||| ||||||||
Sbjct: 109 cctccgtttcatattataagactttctagcattg 76
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 7e-09
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatg 67
|||||||| |||||||||||||||| ||||||| ||| ||| |||||||||
Sbjct: 109 cctccgtttcatattataagactttctagcattacccatattcatatagatg 58
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatt 57
||||||||| |||||||||||||||| || ||||| |||||||
Sbjct: 9 ccctccgtttcatattataagactttctaacattgcccacatt 51
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 60.0 bits (30), Expect = 7e-09
Identities = 81/96 (84%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatata-gatgtgggcaa 74
||||||| |||| ||||||||||| |||||||||||| ||| ||||| || || ||||
Sbjct: 100 cctccgtctcataatataagactttctagcattgtccatattcatatataatatgagcaa 41
Query: 75 tgccataaagtcttacaatatgaaaacggaggaagt 110
||| | ||||||||| | ||| ||||||||||||||
Sbjct: 40 tgctagaaagtcttatattat-aaaacggaggaagt 6
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 58.0 bits (29), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatataga 65
||||||||| |||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 9 ccctccgtttcataatgtaagactttttagcatcgtccatatttatataga 59
Score = 54.0 bits (27), Expect = 4e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatag 64
|||||||| |||| ||||||||||| ||| || ||||| ||||||||||
Sbjct: 108 cctccgttccataatataagactttttagtatcgtccatatttatatag 60
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 58.0 bits (29), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatataga 65
||||||||| || | ||||||||||| |||||| ||||| |||||||||||
Sbjct: 9 ccctccgtttcacaatataagactttttagcatcgtccatatttatataga 59
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccac 54
|||||||| |||||||||||||||| |||||||| ||||
Sbjct: 82 cctccgtttcatattataagactttctagcattgcccac 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 67 gtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||| | ||||||||| |||||| |||||||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatg-aaacggaggaagt 86
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagat 66
|||||||| || | | ||||||||| ||||||||||||||||||| |||||
Sbjct: 151 cctccgtttcacaatgtaagactttttagcattgtccacatttatttagat 101
Score = 50.1 bits (25), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttata 61
||||||||| |||| | ||||||||| || |||||||||||| ||||
Sbjct: 9 ccctccgtttcataatgtaagactttctaccattgtccacatatata 55
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||| ||||||||||| ||| |||| ||| ||| ||||||||||
Sbjct: 9 ccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || | | ||||||||| ||| |||||||||||| ||||||||||
Sbjct: 154 ccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 101
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||| | ||||||||| ||| ||||||||||| ||||||||||
Sbjct: 154 ccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgt 101
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || ||||||||||||| ||||||| ||||||| ||||| ||||
Sbjct: 128 ccctccgtttcaaattataagactttctagcattacccacattcatatatatgt 75
Score = 54.0 bits (27), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||||||||||||||| ||| ||| ||||||| ||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagtattacccacattcatatatatgt 62
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || | | ||||||||| ||| |||||||||||| ||||||||||
Sbjct: 9 ccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgt 62
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||| ||||||||||| ||| |||| ||| ||| ||||||||||
Sbjct: 154 ccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 101
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 56.0 bits (28), Expect = 1e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 30 tataagactttntagcattgtccacatttatatagatgt 68
||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 120 tataagactttctagcactgtccacattcatatagatgt 82
Score = 54.0 bits (27), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatg 67
||||||||| || |||||||||||| ||||| |||||| ||| |||||||||
Sbjct: 9 ccctccgtttcaggttataagactttctagcactgtccatattcatatagatg 61
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 54.0 bits (27), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatg 67
||||||||| |||| ||||||||||| ||||||| ||| ||| |||||||||
Sbjct: 136 ccctccgtttcataatataagactttctagcattacccatattcatatagatg 84
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 4e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 31 ataagactttntagcattgtccacatttatatagatgt 68
|||||||||| |||||||||||||||| ||||| ||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgt 38
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| || |||||||||||| |||||||| ||||||| ||||| ||||
Sbjct: 153 cctccgtttcaagttataagactttctagcattgcccacattcatatatatgt 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| || |||||||||||| | |||||| ||||||| ||||| ||||
Sbjct: 10 cctccgtttcaagttataagactttctggcattgcccacattcatatatatgt 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||||| ||||||||| || || |||||||||||||
Sbjct: 50 atgtgggcaatgccagaaagtcttataacttg-aaacggaggaagt 6
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 53 acatttatatagatgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
|||||||||| ||||||||||||| | ||||||||||| | || |||||||||||||
Sbjct: 62 acatttatatgtatgtgggcaatgctagaaagtcttacattgtg-aaacggaggaagt 6
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||| ||||| ||||||||||||| |||| |||||||||||||
Sbjct: 50 atgtgggtaatgctataaagtcttacattatg-aaacggaggaagt 6
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||||| |||| |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatg-aaacggaggaagt 6
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||||| |||| |||||||||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttacattatg-aaacggaggaagt 157
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||||| |||| |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatg-aaacggaggaagt 6
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 7e-06
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagat 66
|||| ||| |||| | ||||||||| |||| ||| ||||||||||||||||
Sbjct: 10 cctctgtttcataatgtaagactttctagcgttgcccacatttatatagat 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||||| |||||||
Sbjct: 113 atgtgggcaatgctagaaagtcttacattatgaaa 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 58 tatatagatgtgggcaatgccataaagtcttacaatatgaaa 99
|||||| |||||||||| || | ||||||||||| |||||||
Sbjct: 57 tatataaatgtgggcaacgctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| |||| | |||| || |||||||||||||||| ||||||||||
Sbjct: 133 ccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgt 80
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || | | |||| |||| ||| ||||||||||||||| |||||||
Sbjct: 114 ccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgt 61
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || | | ||||||||| |||||||||||| || ||||||||||
Sbjct: 154 ccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgt 101
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 16 cctccgttncatattataagactttntagcattgtccacatt 57
|||||||| || | ||||||||||| | ||||||||||||||
Sbjct: 10 cctccgtttcacaatataagactttttggcattgtccacatt 51
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || | ||||||||||| ||||||| |||||| ||||||||||
Sbjct: 132 ccctccgtttcacaatataagactttctagcattacccacatacatatagatgt 79
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
||||||||| || | ||||||||||| ||||||| |||||| ||||||||||
Sbjct: 9 ccctccgtttcacaatataagactttctagcattacccacatacatatagatgt 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatt 57
|||||||| || | ||||||||||| | ||||||||||||||
Sbjct: 131 cctccgtttcacaatataagactttttggcattgtccacatt 90
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||||| |||| | |||| | || |||||||| |||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgt 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 53 acatttatatagatgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
|||| |||||| ||||||||||||| | || | |||||| |||| |||||||||||||
Sbjct: 101 acatctatatatatgtgggcaatgctagaatgacttacattatg-aaacggaggaagt 157
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 15 ccctccgttncatattataagactttntagcattgtccacatttatatagatg 67
||||||||| || | |||||| | || ||||||| ||||||||||||| ||||
Sbjct: 148 ccctccgtttcacaatataagtcattttagcattttccacatttatattgatg 96
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||||| |||||||
Sbjct: 113 atgtgggcaatgctaaaaagtcttacattatgaaa 147
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||||| |||||||
Sbjct: 102 atgtgggcaatgctagaaagtcttacattatgaaa 136
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||||| |||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattatgaaa 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||||| |||||||
Sbjct: 85 atgtgggcaatgctagaaagtcttacattatgaaa 119
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 16 cctccgttncatattataagactttntagcattgtccacatttatatagatgt 68
|||||| | |||| ||||||||||| |||||||| |||| || | ||||||||
Sbjct: 153 cctccgcttcataatataagactttctagcattgcccacgttcacatagatgt 101
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaa 99
||||||||||||| | ||||||||||| |||||||
Sbjct: 95 atgtgggcaatgctagaaagtcttacattatgaaa 129
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | |||| |||||| |||| |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagacttacattatg-aaacggaggaagt 6
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | |||| |||||| |||| |||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagacttacattatg-aaacggaggaagt 6
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||||| ||| |||||||| |||||
Sbjct: 50 atgtgggcaatgctaaaaagtcttacattat-aaaacggatgaagt 6
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 tagcattgtccacatttatatagatg 67
|||||||||||||||| |||||||||
Sbjct: 36 tagcattgtccacattcatatagatg 61
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 65 atgtgggcaatgccataaagtcttacaatatgaaaacggaggaagt 110
||||||||||||| | ||||||||||| | || |||||||||||||
Sbjct: 89 atgtgggcaatgctagaaagtcttacattgtg-aaacggaggaagt 133
