miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagtagtaa 144
||||||||||||||||||||| ||||||||||||||||
Sbjct: 81 ctagaaagtcttataatatgaaacggaggaagtagtaa 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 108 tagaaagtcttataatatgatacggaggaagta 140
|||||||||||||||||||| ||||||| ||||
Sbjct: 37 tagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagtag 141
||||||||||||||||||||| |||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggaggaagtag 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 153 cctccgtttcatattataagactttctagcattg 120
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagtag 141
||||||||||||||||||||| |||||||||||||
Sbjct: 81 ctagaaagtcttataatatgaaacggaggaagtag 115
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattgtcc 52
||||||||| | | |||||||||||||||||||||||
Sbjct: 10 cctccgtttcatactataagactttctagtattgtcc 46
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagtag 141
||||||||||||||| ||||| ||||||| |||||
Sbjct: 38 ctagaaagtcttatagtatgaaacggagggagtag 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 109 cctccgtttcatattataagactttctagcattg 76
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagtagtaa 144
||||||||||||||||||||| ||||||| ||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtagtaa 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| || |||||||||
Sbjct: 99 ctagaaagtcttataatatgaaactgaggaagta 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 13 ctacctccgttttagattataagactttctagtattg 49
|||||||| ||| ||||||||||||||||||| ||||
Sbjct: 132 ctacctccatttcagattataagactttctagcattg 96
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagtagtaa 144
||||||||||||||||||||| ||||||| ||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtagtaa 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| || |||||||||
Sbjct: 99 ctagaaagtcttataatatgaaactgaggaagta 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 104 ctagaaagtcttataatatgaaacggaggaagta 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattgtcc 52
||||||||| | ||||||||||||||||| |||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgtcc 46
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattgtcc 52
||||||||| | ||||||||||||||||| |||||||
Sbjct: 132 cctccgtttcatattataagactttctagcattgtcc 96
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||| ||||
Sbjct: 127 ctagaaagtcttataatatgaaacggagggagta 160
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 155 cctccgtttcatattataagactttctagcattg 122
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtatt 48
||||||||| | |||||||||||||||||||||
Sbjct: 10 cctccgtttcatattataagactttctagtatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagtag 141
||||||||||||||||| ||| ||||||| |||||
Sbjct: 99 ctagaaagtcttataatttgaaacggagggagtag 133
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 54 ctagaaagtcttataatatgaaacggaggaagta 87
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 82 cctccgtttcatattataagactttctagcattg 49
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 81 ctagaaagtcttataatatgaaacggaggaagta 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 111 aaagtcttataatatgatacggaggaagtagta 143
||||||||||||||||| ||||||| |||||||
Sbjct: 34 aaagtcttataatatgaaacggagggagtagta 2
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 71 ctagaaagtcttataatatgaaacggaggaagta 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 99 cctccgtttcatattataagactttctagcattg 66
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||||||||
Sbjct: 93 ctagaaagtcttataatatgaaacggaggaagta 126
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||| ||||||||||||| ||||||| ||||
Sbjct: 38 ctagaaaatcttataatatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 121 cctccgtttcatattataagactttctagcattg 88
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagtagta 143
||||||||||||||||||||| ||||||| |||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtagta 2
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| | ||||||||||
Sbjct: 95 ctagaaagtcttataatatgaaaaggaggaagta 128
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 108 tagaaagtcttataatatgatacggaggaagta 140
|||||||||||||||||||| ||||||||||||
Sbjct: 37 tagaaagtcttataatatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||| ||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattgtcc 52
||||||||| | ||||||||||||||||| |||||||
Sbjct: 153 cctccgtttcatattataagactttctagaattgtcc 117
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagtagta 143
||||||||||||||||||||| ||||||| |||||||
Sbjct: 95 ctagaaagtcttataatatgaaacggagggagtagta 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| | ||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaaaggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | ||||||||||||||||| ||||
Sbjct: 123 cctccgtttcatattataagactttctagcattg 90
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagtagt 142
|||||||||||||||||| || ||||||||||||||
Sbjct: 38 ctagaaagtcttataataagaaacggaggaagtagt 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| || |||||||||
Sbjct: 102 ctagaaagtcttataatatgaaacagaggaagta 135
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||||| ||||||||||| ||||||||||
Sbjct: 10 cctccgttttatattataagactatctagtattg 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 tagaaagtcttataatatgatacggaggaagta 140
|||||||||||||||||||| ||||||| ||||
Sbjct: 106 tagaaagtcttataatatgaaacggagggagta 138
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||| ||||||||||||| | ||||||||||||
Sbjct: 38 ctagatagtcttataatataaaacggaggaagta 5
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||| ||||| ||||||||||||
Sbjct: 72 ctagaaagtcttatattatgagacggaggaagta 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||| ||| | ||||||||||||
Sbjct: 38 ctagaaagtcttatattataaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||||| | ||||||||||||||| ||||
Sbjct: 10 cctccgttttataatataagactttctagcattg 43
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| ||||||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| ||||||||||||||||||| ||||
Sbjct: 154 cctccgtttcagattataagactttctagcattg 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||| ||| ||||||| ||||
Sbjct: 126 ctagaaagtcttataatctgaaacggagggagta 159
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagtagta 143
||||||||||||| | ||||| |||||||||||||||
Sbjct: 123 ctagaaagtcttacattatgaaacggaggaagtagta 159
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 112 aagtcttataatatgatacggaggaagta 140
|||||||||||||||| ||||||||||||
Sbjct: 127 aagtcttataatatgaaacggaggaagta 155
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||||||||| || |||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacagagggagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 13 ctacctccgttttagattataagactttcta 43
|||||||||||||| | ||||||||||||||
Sbjct: 132 ctacctccgttttacaatataagactttcta 102
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagtag 141
||||||||||||| | ||||| |||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||| ||||| ||||||| ||||
Sbjct: 107 ctagaaagtcttatattatgaaacggagggagta 140
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||| ||||| ||||||| ||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | | ||||||||||||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagtattg 43
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||| | ||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||| ||||||| ||||||| ||||
Sbjct: 38 ctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 cctccgttttagattataagactttctagtattg 49
||||||||| | | ||||||||||||||||||||
Sbjct: 153 cctccgtttcataatataagactttctagtattg 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||| ||||| ||||||| ||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||| | ||||| ||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||||| ||||| |||||||||||
Sbjct: 125 ctagaaagtcttatattatgaagcggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 107 ctagaaagtcttataatatgatacggaggaagta 140
||||||||||||| | ||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
