miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| | |||||| ||| || ||||||||||||||||||||||| |||||
Sbjct: 62 ttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagca 121
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
|| |||||||||||| || |||||||||
Sbjct: 122 atgctaaaaagtcttacattatgaaacgga 151
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | ||||| || ||||||||| || |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 62 ttaatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatg 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatg 48
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| | |||||| ||| || ||||||||||||||||||||||| ||| |
Sbjct: 101 ttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagga 42
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
|| |||||||||||| || |||||||||
Sbjct: 41 atgctaaaaagtcttacattatgaaacgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | ||||| || ||||||||| || |||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| |||||||| ||| || |||||||||||||||||||||| |||||
Sbjct: 62 ttaatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagca 121
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
|| || ||||||||| || |||||||||
Sbjct: 122 atgctagaaagtcttacattatgaaacgga 151
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | |||||| || |||| |||| || |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacgga 12
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| |||| ||| ||| | || ||||||||||||||||||||||| | |||
Sbjct: 38 ttaatgaatctagacatgtatgtgtgcctagattcattaacatctatatgaatgtgggca 97
Query: 110 atattaaaaagtcttat 126
|| || ||||||||||
Sbjct: 98 atgctagaaagtcttat 114
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| | |||||| ||| | || ||||||||||||||||||||||| | |||
Sbjct: 38 ttaatgaatctagatatatatatgtgcctagattcattaacatctatatgaatgtgggca 97
Query: 110 atattaaaaagtcttat 126
|| || ||||||||||
Sbjct: 98 atgctagaaagtcttat 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttat 126
|||||||||||| |||||||||| | ||||| || ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 85 attaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||| ||||||| | ||||||||| |||||||||||| |||||||||
Sbjct: 63 attaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacgga 117
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | |||||| || ||||||||| || |||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacgga 151
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| |||||||| || ||||||||||||||||||||||||| | |||
Sbjct: 101 ttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggca 42
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
|| || ||||||||| || |||||||||
Sbjct: 41 gtactagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
|||||||||||||||| |||||| | ||||| ||||||||||||| || |||||||||
Sbjct: 93 attcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacgga 151
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| | |||||| ||| || ||||||||||||||||||||||| |||||
Sbjct: 101 ttaatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagca 42
Query: 110 at 111
||
Sbjct: 41 at 40
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||||
Sbjct: 94 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacgga 152
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 78 taaattcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacg 137
|||||||||||||||||||||||||| | ||||| |||||||| ||| || |||||||
Sbjct: 74 taaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacg 133
Query: 138 ga 139
||
Sbjct: 134 ga 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||| | |||||||||||| |||||
Sbjct: 137 cctccgtttcataatgtaaaactttttagcattg 104
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 82 ttcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||| | |||||| || |||||||||||| |||||||||
Sbjct: 69 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | |||| |||||||||||| || |||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 78 taaattcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacg 137
|||||||||||||||||||||||||| | ||||| || ||||||||| || |||||||
Sbjct: 73 taaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 14
Query: 138 ga 139
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| |||||||| || ||||||||||||||||||||||||| | |||
Sbjct: 101 ttaatgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggca 42
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
|| || ||||||||| || |||||||||
Sbjct: 41 gtactagaaagtcttacatggtgaaacgga 12
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
|||||||||||||||||||||| | |||||| || ||||||||| || |||||||||
Sbjct: 93 attcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1 tagatccttcctccgtttcatattataaaactttttaccattgtcc 46
||||| |||||||||||||||||||||| ||||| || ||||||||
Sbjct: 141 tagatacttcctccgtttcatattataagactttctagcattgtcc 96
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcatattataaaactttttaccattgtcc 46
||||||||||||||||||| ||||| || ||||||||
Sbjct: 10 cctccgtttcatattataagactttctagcattgtcc 46
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
||||| |||||| |||||||| ||| | | |||||||||||| |||||||||| | |||
Sbjct: 62 ttaataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggca 121
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
|| || ||||||||||| | |||||||||
Sbjct: 122 atgctagaaagtcttataacttgaaacgga 151
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 82 ttcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||| | |||||| || |||||||||||| |||||||||
Sbjct: 94 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacgga 151
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | |||| |||||||||||| || |||||||||
Sbjct: 70 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| ||| ||| ||||||||||||||| |||||||
Sbjct: 101 ttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtctta 125
||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtaggcaatattaaaaagtctta 26
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||| ||| ||||||| || ||||||||| || |||||||||
Sbjct: 93 attcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 51 taatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagcaa 110
||||||||||| |||||||| ||| | || |||||||| ||| |||||||||| | ||||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaa 122
Query: 111 tattaaaaagtcttatatcctgaaacgga 139
| || ||||||||| || |||||||||
Sbjct: 123 tgctagaaagtcttacattatgaaacgga 151
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 58.0 bits (29), Expect = 4e-08
Identities = 77/92 (83%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaac--atctatatgaatgggag 107
||||||||||||||||||| | ||| ||| |||||||||| || |||||| ||| |||
Sbjct: 62 ttaatgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgag 121
Query: 108 caatattaaaaagtcttatatcctgaaacgga 139
|||| |||||||||||| || |||||||||
Sbjct: 122 caatgctaaaaagtcttacattgtgaaacgga 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||||||| ||| | | ||| ||||||||||||||| |||||||
Sbjct: 101 ttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 52 aatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
||||||||||||||||||| ||| || |||||||||||| ||||||||||
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatg 48
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 52 aatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||| |||||||| ||| || |||||||||||||||||||||||
Sbjct: 75 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatg 24
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttata 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/54 (88%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||| | |||| || |||||||||||||||||||||||
Sbjct: 99 ttaatgaatctagacatatgtgtgtc--tagattcattaacatctatatgaatg 48
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 77 ttaaattcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaac 136
||||||||||||||||||||||| || ||||||| ||||| |||||| || ||||||
Sbjct: 68 ttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaac 127
Query: 137 gga 139
|||
Sbjct: 128 gga 130
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttata 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
|||||||| |||||||||||||| | ||||| ||| ||||||||| || |||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 77 ttaaattcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaac 136
||||||||||||||||||||||| || ||||||| ||||| |||||| || ||||||
Sbjct: 74 ttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaac 15
Query: 137 gga 139
|||
Sbjct: 14 gga 12
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | ||||| || ||||||||| || |||||||||
Sbjct: 93 attcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttata 24
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaatgctagaaagtcttata 141
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 7 cttcctccgtttcatattataagactttctagcattg 43
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 155 cctccgtttcatattataagactttctagcattg 122
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaattctagaaagtcttata 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 95 attcattaacatctatatgaatg 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactt 33
|||||||||||||||||||||| ||||
Sbjct: 153 cttcctccgtttcatattataagactt 127
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/54 (88%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| |||| || ||||||||||||| |||||||||
Sbjct: 99 ttaatgaatctagacatatatatgtc--tacattcattaacatcaatatgaatg 48
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/54 (87%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
||||||||| || |||||||| |||| || ||||||||||||| |||||||||
Sbjct: 62 ttaatgaatgtagacatatatatgtc--tagattcattaacatcaatatgaatg 113
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | || | || ||||||||||| |||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacgga 132
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct: 61 attcattaacatctatatgaatgtgggcaatgctagaaagtcttata 107
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 124 cttcctccgtttcatattataagactttctagcattg 88
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||||||| | ||||| || ||||||||| || |||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 133
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
||||||||||||||||||| | ||| || | ||||||||||||| |||||||||
Sbjct: 100 ttaatgaatctaaacatatgtatgtgct-agattcattaacatcaatatgaatg 48
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 52 aatgaatctaaacatatatttgtccttaaattcattaacatctatatgaa 101
|||||||||| |||||||| ||| ||| ||||||| |||||||||||||
Sbjct: 64 aatgaatctagacatatatatgtgtttagattcattgacatctatatgaa 113
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 7 cttcctccgtttcatattataagactttctaacattg 43
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 52 aatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagcaat 111
|||||||||||||| |||| | | || ||||||| |||| |||||||||| | |||||
Sbjct: 99 aatgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaat 40
Query: 112 attaaaaagtcttata 127
||| |||||||||||
Sbjct: 39 gttagaaagtcttata 24
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| |||||| | ||| ||| |||||||||| |||||||| || |||||
Sbjct: 101 ttaatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagca 42
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
|| || ||||||||| || |||||||||
Sbjct: 41 atgctagaaagtcttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||| |||||| | ||||| |||||||||||| || |||||||||
Sbjct: 93 attcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagca 109
|||||||||||| |||||| | ||| ||| ||||||||||||| ||||| | | | |||
Sbjct: 62 ttaatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggca 121
Query: 110 atattaaaaagtcttatatcctgaaacgga 139
||| || ||||||||| || |||||||||
Sbjct: 122 atactagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttat 126
||||||||||||||||||||||| | ||||| || ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| | | ||| ||||||||||||| |||||||||
Sbjct: 36 ttaatgaatctagacatatatatctatttagattcattaacatcaatatgaatg 89
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 51 taatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagcaa 110
||||||||||| |||||| | ||| ||| |||||||||||| |||||| ||| | ||||
Sbjct: 100 taatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaa 41
Query: 111 tattaaaaagtcttatatcctgaaacgga 139
| || ||||||||| || |||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 7 cttcctccgtttcatattataagactttctagcattg 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
|||| |||||||||||||||||| | ||||| || |||||||||||
Sbjct: 70 attcgttaacatctatatgaatgtgggcaatgctagaaagtcttata 24
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 51 taatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatgggagcaa 110
||||||||||| |||||||| ||| || ||||||||||||||||||| || | ||||
Sbjct: 100 taatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaa 41
Query: 111 tattaaaaagtcttata 127
| || |||||||||||
Sbjct: 40 tgctagaaagtcttata 24
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 156 cttcctccgtttcatattataagactttctagcattg 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
|||||||| |||||||||||||| | ||||| || |||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaaagtcttata 139
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 112 cttcctccgtttcatattataagactttctagcattg 76
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 85 cttcctccgtttcatattataagactttctagcattg 49
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactttttaccattg 43
|||||||||||||||||||||| ||||| || |||||
Sbjct: 102 cttcctccgtttcatattataagactttctagcattg 66
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatat 128
|||||||||||||||||||||| ||||||| || |||| |||||||
Sbjct: 70 attcattaacatctatatgaatatgagcaatgctagaaagacttatat 23
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactttttaccattgtcc 46
|||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 126 cttcctccttttcatattataagactttctagcattgtcc 87
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 10 cctccgtttcatattataagactttctagcattg 43
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 51 taatgaatctaaacatatatttgtccttaaattcattaacatctatatgaat 102
|||||||||||||||||||| | | ||||||||||| |||| ||||||||
Sbjct: 100 taatgaatctaaacatatatatctatctaaattcattagcatcaatatgaat 49
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaacttt 34
|||||||||||||||||||||| |||||
Sbjct: 112 cttcctccgtttcatattataagacttt 85
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 10 cctccgtttcatattataagactttctaacattg 43
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcatattataaaactttttaccattgtcc 46
|||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 7 cttcctccttttcatattataagactttctagcattgtcc 46
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 123 cctccgtttcatattataagactttctagcattg 90
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatat 128
|||||||||||||||||| ||| | ||||| ||| ||||||||||||
Sbjct: 69 attcattaacatctatatatatgtgggcaatgttagaaagtcttatat 116
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcatattataaaacttt 34
|||||||||||||||||||||| |||||
Sbjct: 7 cttcctccgtttcatattataagacttt 34
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaacttt 34
|||||||||||||||||||||| |||||
Sbjct: 112 cttcctccgtttcatattataagacttt 85
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcatattataaaactttttaccattgtcc 46
||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 133 cttcctctgtttcatattataagactttctagcattgtcc 94
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttata 127
|||||||| |||||||||||||| | ||||| || |||||||||||
Sbjct: 73 attcattagcatctatatgaatgtgggcaatgatagaaagtcttata 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcatattataaaactttttaccattg 43
||||||||||||||||||| ||||| || |||||
Sbjct: 133 cctccgtttcatattataagactttctatcattg 100
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatg 48
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 67 attcattaacatctatatgaatg 89
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 ttaaattcattaacatctatatgaatg 103
|||||||||||| ||||||||||||||
Sbjct: 89 ttaaattcattagcatctatatgaatg 115
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 91 attcattaacatctatatgaatg 113
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatg 48
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatg 48
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 67 attcattaacatctatatgaatg 89
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||| ||| | | ||| || |||||||||||| |||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacgga 129
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||| ||| | | ||| || |||||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacgga 12
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||| |||||| ||||||| || ||||||||| || |||||||||
Sbjct: 70 attcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||| ||| | ||||| || ||||||||| || |||||||||
Sbjct: 82 attcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacgga 140
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 85 attaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||||||| | ||||| || ||||||||| || |||||||||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacgga 127
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatg 48
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||| ||| | | ||| |||||| ||||||||||||||||
Sbjct: 62 ttaatgaatctagacatctatatatatttagattcatcaacatctatatgaatg 115
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||| ||||||||| ||| |||| ||||| | |||| || |||||||||
Sbjct: 82 attcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacgga 140
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtcttatatcctgaaacgga 139
||||||||||||||| |||||||| | |||| || ||||||||| || |||||||||
Sbjct: 70 attcattaacatctaaatgaatggaggtaatactataaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaatg 103
|||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatg 48
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaatgggagcaatattaaaaagtc 122
||||||||||||| ||||||||| | ||||| ||| ||||||
Sbjct: 71 attcattaacatccatatgaatgtgggcaatgttagaaagtc 112
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 78 taaattcattaacatctatatg 99
||||||||||||||||||||||
Sbjct: 73 taaattcattaacatctatatg 52
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaat 102
||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaat 114
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| | | ||| ||||||||| ||| |||||||||
Sbjct: 62 ttaatgaatctagacatatatatctatttagattcattaatatcaatatgaatg 115
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 attcattaacatctatatgaat 102
||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaat 114
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| | | || ||||||||||||| |||||||||
Sbjct: 101 ttaatgaatctagacatatatatctatctagattcattaacatcaatatgaatg 48
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| | | || ||||||||||||| |||||||||
Sbjct: 75 ttaatgaatctagacatatatatctatctagattcattaacatcaatatgaatg 22
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| || ||||| | | | || |||||||| ||||||||||||||
Sbjct: 101 ttaatgaatctagacttatatatatgcctagattcattagcatctatatgaatg 48
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| | | || ||||||||||||| |||||||||
Sbjct: 62 ttaatgaatctatacatatatatttatctagattcattaacatcaatatgaatg 115
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 50 ttaatgaatctaaacatatatttgtccttaaattcattaacatctatatgaatg 103
|||||||||||| |||||||| | | ||| ||||||||| ||| |||||||||
Sbjct: 62 ttaatgaatctagacatatatatctatttagattcattaatatcaatatgaatg 115
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 81 attcattaacatctatatgaat 102
||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaat 49
