miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01002870.1/113864-113706 4558:Sorghum bicolor
(sorghum)
Length = 159
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tacttcctctgtttcagattataagacgtttt 36
|||| ||||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtttcaaattataagacgtttt 36
>RF00906;MIR1122;AACV01025230.1/832-919 39947:Oryza sativa Japonica
Group
Length = 88
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 219 actttgacccaagtcaaaacgtctcataacctgaaacgga 258
||||||| | |||||||||| ||| |||||||||||||||
Sbjct: 51 actttgatcaaagtcaaaacatcttataacctgaaacgga 12
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 tacttcctctgtttcagattataagac 31
|||||||||||||||| ||||||||||
Sbjct: 135 tacttcctctgtttcatattataagac 109
