miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AL713943.3/124714-124851 4530:Oryza sativa (rice)
Length = 138
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 40 aacctagtactagaatgtgacacatcctaatacaacgaatctggacatagagtatgtaca 99
||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 30 aacctagtactaggatgggacatatcctaatacaacgaatctgaacatagagtatgtaca 89
Query: 100 gattcgttgtacta 113
||||||||||||||
Sbjct: 90 gattcgttgtacta 103
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 70 tacaacgaatctggacatagagtatgtacagattcgttgtactaggatgtgtcacgtcgt 129
||||||||||||| ||||| ||||| ||||||||||||| |||||| |||| | || |
Sbjct: 100 tacaacgaatctgtacatactctatgttcagattcgttgtattaggatatgtcccatcct 41
Query: 130 agtacgaggtt 140
||||| |||||
Sbjct: 40 agtactaggtt 30
>RF00906;MIR1122;AP008218.1/21039366-21039229 39947:Oryza sativa
Japonica Group
Length = 138
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 40 aacctagtactagaatgtgacacatcctaatacaacgaatctggacatagagtatgtaca 99
||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 109 aacctagtactaggatgggacatatcctaatacaacgaatctgaacatagagtatgtaca 50
Query: 100 gattcgttgtacta 113
||||||||||||||
Sbjct: 49 gattcgttgtacta 36
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 70 tacaacgaatctggacatagagtatgtacagattcgttgtactaggatgtgtcacgtcgt 129
||||||||||||| ||||| ||||| ||||||||||||| |||||| |||| | || |
Sbjct: 39 tacaacgaatctgtacatactctatgttcagattcgttgtattaggatatgtcccatcct 98
Query: 130 agtacgaggtt 140
||||| |||||
Sbjct: 99 agtactaggtt 109
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||| ||| ||||||||||||||||| || |||||| ||||||||| ||||||
Sbjct: 43 atgtgacacattctagtacaacgaatctggacagag-gtatgtccagattcgtagtacta 101
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 102 ggatgtgtcac 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 39 caacctagtactagaatgtgacacatcctaatacaacgaatctggacatagagtatgtac 98
|||||||||||| || |||||||||||||| ||| ||||||||||||||| | ||| |
Sbjct: 128 caacctagtactgga-tgtgacacatcctagtactacgaatctggacata-cctctgtcc 71
Query: 99 agattcgttgtactaggatgtgtcac 124
|||||||||||||||| |||||||||
Sbjct: 70 agattcgttgtactagaatgtgtcac 45
>RF00906;MIR1122;AAAA02022617.1/29987-30140 39946:Oryza sativa
Indica Group
Length = 154
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/64 (92%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||
Sbjct: 112 atgtgacacatcctaatacatcgaatctggacagagag--tgtccagattcgttgtacta 55
Query: 114 ggat 117
||||
Sbjct: 54 ggat 51
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||| ||| ||||||||||||||||||| || ||| ||||||||||||||||
Sbjct: 115 atgtgacacattctagtacaacgaatctggacataaagcctgtccagattcgttgtacta 56
Query: 114 ggat 117
||||
Sbjct: 55 ggat 52
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 43 atgtgacttatcctagtacaacgaatctggacaggctttatgtccagattcgttgtacta 102
Query: 114 ggatgtgtcac 124
| |||||||||
Sbjct: 103 gaatgtgtcac 113
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| ||||||||||||||||| | | ||| ||||||||||||||||
Sbjct: 43 atgtgacacatcctagtacaacgaatctggaca-gtaatttgtccagattcgttgtacta 101
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 102 ggatgtgtcac 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/72 (90%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagta-tgtacagattcgttgtact 112
||||||||||||||| |||||||||||||||| | | || ||| |||||||||||||||
Sbjct: 114 atgtgacacatcctagtacaacgaatctggac--aaattactgtccagattcgttgtact 57
Query: 113 aggatgtgtcac 124
||||||||||||
Sbjct: 56 aggatgtgtcac 45
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 39 caacctagtactagaatgtgacacatcctaatacaacgaatctggacatagagtatgt 96
|||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 104 caacctaggactaga-tgtgacacatcctattacaacgaatctggacatagaatatgt 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 92 tatgtacagattcgttgtactaggatgtgtcac 124
||||| ||||||||||||| |||||||||||||
Sbjct: 56 tatgtccagattcgttgtaataggatgtgtcac 88
>RF00906;MIR1122;AAAA02022032.1/23143-22996 39946:Oryza sativa
Indica Group
Length = 148
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 71 acaacgaatctggacatagagtatgtacagattcgttgtactaggatgtgtcacgtcgta 130
||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||| ||
Sbjct: 98 acaacgaat-tggacatagagtacatctagattcgttatactaggatgtgtcacgtcata 40
Query: 131 gtacgaggttgag 143
||| |||||||||
Sbjct: 39 gtatgaggttgag 27
>RF00906;MIR1122;AACV01013045.1/9312-9408 39947:Oryza sativa
Japonica Group
Length = 97
Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 108 gtactaggatgtgtcacgtcgtagtacgaggttgag 143
||||||||||||||||||||||||||||||||||||
Sbjct: 36 gtactaggatgtgtcacgtcgtagtacgaggttgag 71
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactaggat 117
|||||||||||||||||||||||| |||| ||| | ||| ||||||||||| ||||||||
Sbjct: 47 gacacatcctaatacaacgaatctagacagaga-tttgtccagattcgttgcactaggat 105
Query: 118 gtgt 121
||||
Sbjct: 106 gtgt 109
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/65 (90%), Gaps = 3/65 (4%)
Strand = Plus / Minus
Query: 58 gacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactaggat 117
||||||||||||||||||||||||||||| | || ||| ||||||||||||| ||||||
Sbjct: 109 gacacatcctaatacaacgaatctggaca--gggt-tgtccagattcgttgtattaggat 53
Query: 118 gtgtc 122
|||||
Sbjct: 52 gtgtc 48
Score = 61.9 bits (31), Expect = 3e-09
Identities = 57/65 (87%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactaggat 117
||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||
Sbjct: 48 gacacatcctaatacaacgaatctggaca---accctgtccagattcgttgtattaggat 104
Query: 118 gtgtc 122
|||||
Sbjct: 105 gtgtc 109
>RF00906;MIR1122;AAAA02022585.1/6052-5955 39946:Oryza sativa Indica
Group
Length = 98
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 107 tgtactaggatgtgtcacgtcgtagtacgaggttgag 143
|||||||||||||||||| ||||||||||||||||||
Sbjct: 36 tgtactaggatgtgtcacatcgtagtacgaggttgag 72
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 63.9 bits (32), Expect = 7e-10
Identities = 61/71 (85%), Gaps = 6/71 (8%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 43 atgtgatacatcctaatacaacgaatctggacat------tgtccagattcgttgtatta 96
Query: 114 ggatgtgtcac 124
|||||| ||||
Sbjct: 97 ggatgtatcac 107
Score = 63.9 bits (32), Expect = 7e-10
Identities = 61/71 (85%), Gaps = 6/71 (8%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||| |||||||||||||||||||||||||| |||| ||||||||||||| ||
Sbjct: 109 atgtgatacatcctaatacaacgaatctggaca------atgtccagattcgttgtatta 56
Query: 114 ggatgtgtcac 124
|||||| ||||
Sbjct: 55 ggatgtatcac 45
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||| ||||||||| ||| |||||| | |||||| ||||||| ||||||||
Sbjct: 43 atgtgacacattctaatacaataaatttggacagaccgtatgtccagattcattgtacta 102
Query: 114 ggatgtgtcac 124
|||| ||||||
Sbjct: 103 ggatatgtcac 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
|||||||| |||||| ||||| |||||||||||||
Sbjct: 115 atgtgacatatcctagtacaatgaatctggacata 81
>RF00906;MIR1122;ABRL01001045.1/1775-1911 65489:Oryza barthii
Length = 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgtcacgtcgtagtacgaggtt 140
||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 72 cagattcgttgtactagaatgtgtcatgttgtagtacgaggtt 30
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 109 tactaggatgtgtcacgtcgtagtacgaggt 139
||||||||||||||||||| |||||| ||||
Sbjct: 77 tactaggatgtgtcacgtcctagtactaggt 107
>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa Indica
Group
Length = 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 90 agtatgtacagattcgttgtactaggatgtgtcacgtcgtagtacgaggtt 140
||||||| ||||||||||||||||| |||||||| || ||||||| |||||
Sbjct: 80 agtatgtccagattcgttgtactagaatgtgtcatgttgtagtacaaggtt 30
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 40 aacctagtactagaatgtgacacatcctaatacaacgaatctggacata 88
||||| |||||| || |||||||| ||| |||||||||||||||||||
Sbjct: 30 aaccttgtactacaacatgacacattctagtacaacgaatctggacata 78
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 109 tactaggatgtgtcacgtcgtagtacgaggt 139
||||||||||||||||||| |||||| ||||
Sbjct: 77 tactaggatgtgtcacgtcctagtactaggt 107
>RF00906;MIR1122;AAAA02012907.1/4650-4807 39946:Oryza sativa Indica
Group
Length = 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| || || |||||||||| | || ||||||||||| |||| |||
Sbjct: 44 atgtgacacatcctagtataatgaatctggacggaccgtctgtacagattcattgtgcta 103
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 104 ggatgtgtcac 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| |||| ||||||| ||| | || || ||||||| || |||||
Sbjct: 116 atgtgacacatcctagcacaatgaatctgtacagacggtccgtccagattcattatacta 57
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 56 ggatgtgtcac 46
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||||||| | || || ||||||||||||| |||||| ||||||| || |||||
Sbjct: 43 atgtgacacatcttggtataatgaatctggacataccgtatgtccagattcattatacta 102
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 103 ggatgtgtcac 113
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| || || ||||||||||||| |||||| ||||||| || ||| |
Sbjct: 115 atgtgacacatcctagtataatgaatctggacatacggtatgtccagattcattatacca 56
Query: 114 ggatgtgtcac 124
||||||||||
Sbjct: 55 agatgtgtcac 45
>RF00906;MIR1122;AACV01012603.1/10671-10517 39947:Oryza sativa
Japonica Group
Length = 155
Score = 61.9 bits (31), Expect = 3e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 70 tacaacgaatctggacatagagtatgtacagattcgttgtactaggatgtgtcac 124
|||||||||||||||||| ||| |||| |||||||||||||||| | ||||||||
Sbjct: 99 tacaacgaatctggacat-gagcatgtccagattcgttgtactatgttgtgtcac 46
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||||| | || |||||||||||||||||| | |||| ||||||||||||||||
Sbjct: 44 atgtgacacaacatagtacaacgaatctggacat-gctcatgtccagattcgttgtacta 102
>RF00906;MIR1122;AC130604.4/103163-103007 39947:Oryza sativa
Japonica Group
Length = 157
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||||| | || ||| ||||||||||| | ||| ||||||||||||| | ||||||
Sbjct: 43 atgtgacacaacttagtactacgaatctggataaagattatgtacagattcatagtacta 102
Query: 114 ggatgtgtcac 124
|| ||||||||
Sbjct: 103 ggttgtgtcac 113
>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
Indica Group
Length = 165
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||||||||| ||||||||| | | || ||| || |||| ||||| ||
Sbjct: 51 atgtgacacatcctaatacaatgaatctggatagaccgtctgtccatattcattgtatta 110
Query: 114 ggatgtgtca 123
||||||||||
Sbjct: 111 ggatgtgtca 120
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 57 tgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactagga 116
|||||||||||||||||| |||| |||||| | || | | ||||||| ||||| |||||
Sbjct: 120 tgacacatcctaatacaatgaatatggacagacggtctatccagattcattgtattagga 61
Query: 117 tgtgtcac 124
||||||||
Sbjct: 60 tgtgtcac 53
>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa Japonica
Group
Length = 165
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||||||||| ||||||||| | | || ||| || |||| ||||| ||
Sbjct: 115 atgtgacacatcctaatacaatgaatctggatagaccgtctgtccatattcattgtatta 56
Query: 114 ggatgtgtca 123
||||||||||
Sbjct: 55 ggatgtgtca 46
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 57 tgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactagga 116
|||||||||||||||||| |||| |||||| | || | | ||||||| ||||| |||||
Sbjct: 46 tgacacatcctaatacaatgaatatggacagacggtctatccagattcattgtattagga 105
Query: 117 tgtgtcac 124
||||||||
Sbjct: 106 tgtgtcac 113
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 52 gaatgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtac 111
||||||||||||| ||| |||||| ||| |||| ||| || || | || ||||||| |||
Sbjct: 41 gaatgtgacacattctagtacaacaaatttggatataaagcatatccaaattcgttatac 100
Query: 112 taggatgtgtcac 124
|||||||||||||
Sbjct: 101 taggatgtgtcac 113
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
||||||||||||||| |||||||||||||||||
Sbjct: 94 atgtgacacatcctagtacaacgaatctggaca 62
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtcac 124
|||||||||||||||||||||||||||
Sbjct: 66 cagattcgttgtactaggatgtgtcac 92
>RF00906;MIR1122;CR855136.1/20944-20809 4530:Oryza sativa (rice)
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
|||||||||||| ||||||||||||||||||||
Sbjct: 44 atgtgacacatcttaatacaacgaatctggaca 76
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactaggat 117
||||||| ||| ||||||||||||||||| | |||| | |||||||||||||||||||
Sbjct: 47 gacacattctagtacaacgaatctggaca-ggggtatatccagattcgttgtactaggaa 105
Query: 118 gtgtc 122
|||||
Sbjct: 106 gtgtc 110
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
||||||||||||||| |||||||||||||||||
Sbjct: 75 atgtgacacatcctagtacaacgaatctggaca 43
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtcac 124
|||||||||||||||||||||||||||
Sbjct: 47 cagattcgttgtactaggatgtgtcac 73
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 58.0 bits (29), Expect = 4e-08
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 39 caacctagtactagaatgtgacacatcctaatacaacgaatctggacatagagtatgtac 98
||||||||||| || | ||||| |||||| ||| | ||||||||||||| | | ||| |
Sbjct: 29 caacctagtacctgactttgacatatcctagtactatgaatctggacatata-tctgtcc 87
Query: 99 agattcgttgtactaggatgtgtca 123
|||||||| ||||||||||||||||
Sbjct: 88 agattcgtagtactaggatgtgtca 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 57 tgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactagga 116
|||||||||||| ||| ||||||||||||| | | ||||| ||||||| | |||||||||
Sbjct: 112 tgacacatcctagtactacgaatctggacagata-tatgtccagattcatagtactagga 54
Query: 117 tgtgtca 123
| |||||
Sbjct: 53 tatgtca 47
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 57 tgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactagga 116
||||||||| | ||| |||||||||||||||||||||| |||||| | ||| |||||
Sbjct: 46 tgacacatcatggtactacgaatctggacatagagtatgccaagattcatagtattagga 105
Query: 117 tgtgtcac 124
||||||||
Sbjct: 106 tgtgtcac 113
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||||||| | |||||| | |||| ||||| ||||||||| |||| |
Sbjct: 115 atgtgacacatcctaatactatgaatcttggcatactctatgtccagattcgtagtacca 56
Query: 114 ggatgtgtca 123
|||||||||
Sbjct: 55 tgatgtgtca 46
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggac 85
||||||||||||||||||||| ||||||||||
Sbjct: 43 atgtgacacatcctaatacaatgaatctggac 74
>RF00906;MIR1122;AC135864.5/73183-73340 39947:Oryza sativa
Japonica Group
Length = 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggacatag 89
||||||||||||||| ||||||||||||||||
Sbjct: 47 gacacatcctaatacgacgaatctggacatag 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 69 atacaacgaatctggacatagagtatgtacagattcgttgtactaggatgtgtc 122
|||||||||| ||||||| || ||||| ||||||||| ||| |||||||||||
Sbjct: 99 atacaacgaaactggacag-gactatgtccagattcgtcgtattaggatgtgtc 47
>RF00906;MIR1122;AP008210.1/14859890-14859756 39947:Oryza sativa
Japonica Group
Length = 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtcacgtcgtagtacgaggttg 141
||||||||||||||||||||||||| | || ||||| |||||||
Sbjct: 65 cagattcgttgtactaggatgtgtcccatcctagtatgaggttg 108
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 47 tactagaatgtgacacatcctaatacaacgaatctggac 85
|||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 100 tactaggatgggacacatcctagtacaacgaatctggac 62
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggac 85
||||||||||||||| ||||||||||||||||
Sbjct: 89 atgtgacacatcctagtacaacgaatctggac 58
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtcac 124
|||||||||||||||||||||||||||
Sbjct: 61 cagattcgttgtactaggatgtgtcac 87
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 52 gaatgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtac 111
||||| ||||||||||| ||| |||||| |||||| | | |||| |||||||| ||||
Sbjct: 41 gaatgggacacatcctattactacgaatttggacagacaacatgtctagattcgtagtac 100
Query: 112 taggatgtgtc 122
|||||||||||
Sbjct: 101 taggatgtgtc 111
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
||||||||||||||| ||| |||||||||||||||
Sbjct: 113 atgtgacacatcctagtactacgaatctggacata 79
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 92 tatgtacagattcgttgtactaggatgtgtcac 124
||||| ||||||||| |||||||||||||||||
Sbjct: 79 tatgtccagattcgtagtactaggatgtgtcac 111
>RF00906;MIR1122;AACV01008143.1/21832-21975 39947:Oryza sativa
Japonica Group
Length = 144
Score = 54.0 bits (27), Expect = 7e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 40 aacctagtactagaatgtgacacatcctaatacaacgaatctggaca 86
||||||||| ||| |||||||||||||||| || |||||||||||||
Sbjct: 115 aacctagta-taggatgtgacacatcctaacacgacgaatctggaca 70
>RF00906;MIR1122;AAAA02013101.1/4679-4545 39946:Oryza sativa Indica
Group
Length = 135
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 47 tactagaatgtgacacatcctaatacaacgaatctggac 85
|||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 100 tactagtatgggacacatcctagtacaacgaatctggac 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtc 122
|||||||||||||||||||||||||
Sbjct: 65 cagattcgttgtactaggatgtgtc 89
>RF00906;MIR1122;AAAA02003006.1/3399-3554 39946:Oryza sativa Indica
Group
Length = 156
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||||||| ||||||||| ||| || |||||| ||||| || || |||
Sbjct: 114 atgtgacacatcctaatactacgaatctgaacacag-gtatgtctagatttgtagttcta 56
Query: 114 ggatgtgtcac 124
||||||||||
Sbjct: 55 agatgtgtcac 45
>RF00906;MIR1122;AACV01004468.1/36611-36456 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| ||||| |||||||||| |||| || |||||||||||||||
Sbjct: 114 atgtgacacatcctagtacaataaatctggaca-agagcttgactagattcgttgtacta 56
Query: 114 ggatgtgtcac 124
||||||||||
Sbjct: 55 agatgtgtcac 45
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
||||||||||||||||||| | |||||||||||||
Sbjct: 70 atgtgacacatcctaatacgatgaatctggacata 36
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
||||||||||||||| ||||| |||||||||||||
Sbjct: 102 atgtgacacatcctagtacaatgaatctggacata 68
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 92 tatgtacagattcgttgtactaggatgtgtcac 124
||||| ||||||| |||||||||||||||||||
Sbjct: 68 tatgtccagattcattgtactaggatgtgtcac 100
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||| || ||||| |||||||||||| |||||| |||||| ||||||||
Sbjct: 43 atgtgacacatgatagtacaataaatctggacataccgtatgtccagattgattgtacta 102
Query: 114 ggatgtgtcac 124
|||| ||||||
Sbjct: 103 ggatatgtcac 113
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||| |||||| ||||| |||||||||||| |||||| |||||| ||||||||
Sbjct: 115 atgtgacatatcctagtacaatcaatctggacatacggtatgtccagatttattgtacta 56
Query: 114 ggatgtgtcac 124
|||||||||
Sbjct: 55 tcatgtgtcac 45
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
||||||||||||||| ||| |||||||||||||||
Sbjct: 100 atgtgacacatcctattactacgaatctggacata 66
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 agattcgttgtactaggatgtgtcac 124
||||||||||||||||||||||||||
Sbjct: 46 agattcgttgtactaggatgtgtcac 71
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
||||||||||||||| |||||||||||| ||||
Sbjct: 73 atgtgacacatcctagtacaacgaatctagaca 41
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 39 caacctagtactagaatgtgacacatcctaatacaacgaatctggacatagagtatgtac 98
||||||||||||||| ||||| | |||||| ||| | ||||||||||||| |||| | |
Sbjct: 129 caacctagtactaga-tgtgaaatatcctagtactatgaatctggacataatgtatatcc 71
Query: 99 agattcgttgtactaggatgtgtcac 124
|||||| | ||||||| || ||||||
Sbjct: 70 agattcatagtactagaatatgtcac 45
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa Japonica
Group
Length = 97
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 108 gtactaggatgtgtcacgtcgtagtacgaggttg 141
||||||||||||||||||| |||||||||||||
Sbjct: 36 gtactaggatgtgtcacgtactagtacgaggttg 69
>RF00906;MIR1122;AAAA02021630.1/597-753 39946:Oryza sativa Indica
Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||| ||||||||||||||||||| || | | || ||| ||||||||| |||||
Sbjct: 43 atgtgacatatcctaatacaacgaatctagataaaccgtctgtctagattcgttatacta 102
Query: 114 ggatgtgtca 123
| ||||||||
Sbjct: 103 gaatgtgtca 112
>RF00906;MIR1122;AAAA02018504.1/8341-8217 39946:Oryza sativa
Indica Group
Length = 125
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 57 tgacacatcctaatacaacgaatctggac 85
|||||||||||||||||| ||||||||||
Sbjct: 80 tgacacatcctaatacaatgaatctggac 52
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
|||||||| |||||||||||| |||||||||||
Sbjct: 114 atgtgacatatcctaatacaatgaatctggaca 82
>RF00906;MIR1122;AP008207.1/7610981-7610850 39947:Oryza sativa
Japonica Group
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 57 tgacacatcctaatacaacgaatctggacatag 89
|||||||||||| ||||||| ||||||||||||
Sbjct: 87 tgacacatcctagtacaacgtatctggacatag 55
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 92 tatgtacagattcgttgtactaggatgtgtca 123
||||| ||||| ||||||||||||||||||||
Sbjct: 56 tatgtccagatacgttgtactaggatgtgtca 87
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
|||| |||||||||| |||||||||||||||||
Sbjct: 43 atgtaacacatcctagtacaacgaatctggaca 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgt 121
||||||||||||||||||||||||
Sbjct: 71 cagattcgttgtactaggatgtgt 48
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
||||||||||||||| ||| |||||||||||||
Sbjct: 92 atgtgacacatcctagtactacgaatctggaca 60
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtcac 124
||||||||| |||||||||||||||||
Sbjct: 64 cagattcgtagtactaggatgtgtcac 90
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactaggat 117
|||||||| || ||| || |||||||||| | || ||| ||||||||| ||||||||||
Sbjct: 26 gacacatcatagtactacaaatctggacaaggggtctgtccagattcgtagtactaggat 85
Query: 118 gtgtc 122
|||||
Sbjct: 86 gtgtc 90
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
|||||||| |||||||||||| |||||||||||
Sbjct: 114 atgtgacatatcctaatacaatgaatctggaca 82
>RF00906;MIR1122;AACV01000871.1/13756-13601 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 57 tgacacatcctaatacaacgaatct 81
|||||||||||||||||||||||||
Sbjct: 111 tgacacatcctaatacaacgaatct 87
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 52 gaatgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtac 111
||||||||||||||||| || || |||| ||| |||| || || | ||||||||||||
Sbjct: 41 gaatgtgacacatcctagtataatgaatatgggcata-agcatatttagattcgttgtat 99
Query: 112 taggatgtgtca 123
||||||||||||
Sbjct: 100 taggatgtgtca 111
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
||||||||||||||| |||||||||| ||||||
Sbjct: 79 atgtgacacatcctagtacaacgaatttggaca 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 101 attcgttgtactaggatgtgtcac 124
||||||||||||||||||||||||
Sbjct: 54 attcgttgtactaggatgtgtcac 77
>RF00906;MIR1122;AP008217.1/27843705-27843861 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||| |||||| ||| ||||||||||||| |||||||| ||||||| | ||||||
Sbjct: 43 atgtgacgtatcctagtactacgaatctggacagggagtatgtccagattcatagtacta 102
Query: 114 g 114
|
Sbjct: 103 g 103
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
|||||||| |||||||||| |||||||||||||
Sbjct: 43 atgtgacatatcctaatacgacgaatctggaca 75
>RF00906;MIR1122;AP004314.3/140580-140716 39947:Oryza sativa
Japonica Group
Length = 137
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggaca 86
||||||||||||||||||||| ||||||||||
Sbjct: 43 atgtgacacatcctaatacaataaatctggaca 75
>RF00906;MIR1122;AP008207.1/11769320-11769475 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 tgacacatcctaatacaacgaatct 81
|||||||||||||||||||||||||
Sbjct: 46 tgacacatcctaatacaacgaatct 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 52 gaatgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtac 111
||||||||||||||||| || || |||| ||| |||| || || | ||||||||||||
Sbjct: 116 gaatgtgacacatcctagtataatgaatatgggcata-agcatatttagattcgttgtat 58
Query: 112 taggatgtgtca 123
||||||||||||
Sbjct: 57 taggatgtgtca 46
>RF00906;MIR1122;AC213908.1/124220-124111 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggacataga 90
|||||||||||| || |||||||||||||||||
Sbjct: 47 gacacatcctaagactacgaatctggacataga 79
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||| || |||||||||||||||||| || ||| || |||||||||||||
Sbjct: 115 atgtgacacattatagtacaacgaatctggacatgaagcctgtccaaattcgttgtacta 56
Query: 114 g 114
|
Sbjct: 55 g 55
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggaca 86
||||||||||| |||||||||||||||||
Sbjct: 47 gacacatcctagtacaacgaatctggaca 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgtc 122
|||||||||||||||||||||||||
Sbjct: 71 cagattcgttgtactaggatgtgtc 47
>RF00906;MIR1122;ABRL01001363.1/4171-4043 65489:Oryza barthii
Length = 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 101 attcgttgtactaggatgtgtcac 124
||||||||||||||||||||||||
Sbjct: 68 attcgttgtactaggatgtgtcac 45
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctgga 84
||||||||||||||| |||||||||| ||||
Sbjct: 43 atgtgacacatcctagtacaacgaatatgga 73
>RF00906;MIR1122;AACV01018155.1/14353-14197 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||| |||||| ||||| |||||||||||| |||||| |||||| ||||||||
Sbjct: 43 atgtgacatatcctagtacaatcaatctggacatacggtatgtccagattgattgtacta 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 77 aatctggacatagagtatgtacagattcgttgtactaggatgtgtcac 124
|||||||||||| |||||| |||||| |||||||||||| ||||||
Sbjct: 92 aatctggacataccgtatgtccagattgattgtactaggatatgtcac 45
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 57 tgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtactagga 116
|||||||||||||||| ||||| || |||| |||| ||| |||||| || |||||||||
Sbjct: 111 tgacacatcctaatactacgaaactagaca-ggagtctgtccagatttgtagtactagga 53
Query: 117 tgtgtcac 124
|| |||||
Sbjct: 52 tgcgtcac 45
>RF00906;MIR1122;AAAA02013097.1/8926-9081 39946:Oryza sativa Indica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 91 gtatgtacagattcgttgtactaggatgtgtc 122
||||||| |||||||||||| |||||||||||
Sbjct: 79 gtatgtatagattcgttgtattaggatgtgtc 110
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 58 gacacatcctaatacaacgaatct 81
||||||||||||||||||||||||
Sbjct: 110 gacacatcctaatacaacgaatct 87
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggac 85
||||||||||||||| ||| ||||||||||||
Sbjct: 39 atgtgacacatcctagtactacgaatctggac 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgtcac 124
||||||||| |||||||||||||||||
Sbjct: 67 cagattcgtagtactaggatgtgtcac 41
>RF00906;MIR1122;AP005832.2/107472-107603 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 39 caacctagtactagaatgtgacacatcctaatacaacgaatctg 82
|||||||||||| ||||||||| |||| || |||||||||||||
Sbjct: 29 caacctagtact-gaatgtgacgcatcttagtacaacgaatctg 71
>RF00906;MIR1122;AAAA02018672.1/7033-6895 39946:Oryza sativa Indica
Group
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 70 tacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||| ||||||||||| ||| |||| ||||||||||||||||
Sbjct: 63 tacaacaaatctggacat-gagcatgtccagattcgttgtacta 105
>RF00906;MIR1122;AAAA02027770.1/12261-12396 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 39 caacctagtactagaatgtgacacatcctaatacaacgaatctggaca 86
|||||||||||| || ||||||| |||||| ||| |||||||||||||
Sbjct: 108 caacctagtactgga-tgtgacatatcctagtactacgaatctggaca 62
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| ||| ||||||||||| ||| | | ||||||||| ||||||
Sbjct: 43 atgtgacacatcctagtactacgaatctggaggcagattcgg--cagattcgtagtacta 100
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 101 ggatgtgtcac 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgtcac 124
||||||||| |||||||||||||||||
Sbjct: 71 cagattcgtagtactaggatgtgtcac 45
>RF00906;MIR1122;AAAA02032462.1/25561-25405 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggac 85
||||||||||||||| || |||||||||||||
Sbjct: 115 atgtgacacatcctagtataacgaatctggac 84
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtcac 124
|||||||||| ||||||||||||||||
Sbjct: 87 cagattcgttatactaggatgtgtcac 113
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/67 (85%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 58 gacacatcctaatacaacgaatctggaca--tagagtatgtacagattcgttgtactagg 115
||||||||||| ||| |||||||| |||| ||| || | | ||||||||| ||||||||
Sbjct: 47 gacacatcctagtactacgaatctagacaagtagtgtctatccagattcgtagtactagg 106
Query: 116 atgtgtc 122
|||||||
Sbjct: 107 atgtgtc 113
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 39 caacctagtactagaatgtgacacatcctaatacaacgaatctggacatagagtatgtac 98
||||||||||| ||| |||||||||||||| || | ||||||||||||| | ||||| |
Sbjct: 128 caacctagtaccaga-tgtgacacatcctagtattatgaatctggacataca-tatgtcc 71
Query: 99 agattcgttgtactag 114
|||||| | |||||||
Sbjct: 70 agattcatcgtactag 55
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| || | ||||||||||||| || ||| || |||| ||||||||
Sbjct: 115 atgtgacacatcctagtatgatgaatctggacataaagcctgtccaaattcattgtacta 56
Query: 114 ggat 117
||||
Sbjct: 55 ggat 52
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||| ||| ||||| |||||| |||||| || ||| |||||| | |||||||
Sbjct: 115 atgtgacacattctagtacaatgaatctagacataaagcctgtccagatttgctgtacta 56
Query: 114 ggat 117
||||
Sbjct: 55 ggat 52
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa
Indica Group
Length = 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 gaatgtgacacatcctaatacaacgaatctggaca 86
|||| |||||||||||| ||||| |||||||||||
Sbjct: 70 gaatatgacacatcctagtacaatgaatctggaca 36
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 98 cagattcgttgtactaggatgtgtca 123
||||||| ||||||||||||||||||
Sbjct: 40 cagattcattgtactaggatgtgtca 65
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa Indica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||||||| ||||| || ||| |||| ||| |||||| || ||||||
Sbjct: 114 atgtgacacatcctaatactacgaaactacaca-ggagtctgtccagatttgtagtacta 56
Query: 114 ggatgtgtcac 124
||||| |||||
Sbjct: 55 ggatgcgtcac 45
>RF00906;MIR1122;AAAA02027438.1/10618-10774 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 70 tacaacgaatctggacatagagtatgtacagattcgttgtactagga 116
|||||| |||||||||| ||| ||| |||||||||||||||||||
Sbjct: 59 tacaacaaatctggacaggtagtctgtgcagattcgttgtactagga 105
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
||||||||||||||| ||||| |||||| ||||||
Sbjct: 43 atgtgacacatcctagtacaatgaatctagacata 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 90 agtatgtacagattcgttgtactaggatgtgtcac 124
||||||| |||||| |||||||||||||||||||
Sbjct: 79 agtatgtctagattcattgtactaggatgtgtcac 45
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 52 gaatgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtac 111
||||| || |||||||| ||| |||||| |||||| | | |||| |||||||| ||||
Sbjct: 41 gaatgggatacatcctattactacgaatttggacagacaacatgtctagattcgtagtac 100
Query: 112 taggatgtgtc 122
|||||||||||
Sbjct: 101 taggatgtgtc 111
>RF00906;MIR1122;AC229932.1/30140-30028 63629:Oryza minuta
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 75 cgaatctggacatagagtatgtacagattcg 105
||||||||||||||| |||||| ||||||||
Sbjct: 72 cgaatctggacatagcgtatgtccagattcg 42
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||| || ||| || || ||||||||| | ||| ||||| ||||||||| || |||
Sbjct: 43 atgtgacatattctagtataatgaatctggatagaga-tatgtccagattcgtagtccta 101
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 102 ggatgtgtcac 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
||||||||||||||| || |||||||||||||||
Sbjct: 114 atgtgacacatcctaggactacgaatctggacata 80
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
|||||||||||| |||||| | |||||||||||||
Sbjct: 102 atgtgacacatcataatactatgaatctggacata 68
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 63 atcctaatacaacgaatctggac 85
|||||||||||||||||||||||
Sbjct: 105 atcctaatacaacgaatctggac 83
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctgga 84
||||||||||||||| ||||| |||||||||
Sbjct: 43 atgtgacacatcctagtacaatgaatctgga 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgtcac 124
||||||| |||||||||||||||||||
Sbjct: 71 cagattcattgtactaggatgtgtcac 45
>RF00906;MIR1122;AC119290.2/13041-12931 39947:Oryza sativa Japonica
Group
Length = 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| ||||| |||| ||| || | || | | ||||||| ||||| ||
Sbjct: 20 atgtgacacatcctagtacaatgaatttggccagaacgtctttccagattcattgtaata 79
Query: 114 ggatgtgtcac 124
|||||||||||
Sbjct: 80 ggatgtgtcac 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctgga 84
||||||||||||||| ||||| |||||||||
Sbjct: 92 atgtgacacatcctattacaatgaatctgga 62
>RF00906;MIR1122;ABRL01002047.1/990-1143 65489:Oryza barthii
Length = 154
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 56 gtgacacatcctaatacaacgaatctggaca 86
||||||||| ||||| |||||||||||||||
Sbjct: 110 gtgacacattctaatccaacgaatctggaca 80
>RF00906;MIR1122;AC148822.2/9529-9662 39947:Oryza sativa Japonica
Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctgga 84
|||||| |||||||| |||||||||||||||
Sbjct: 43 atgtgaaacatcctagtacaacgaatctgga 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgtcac 124
|||||||||||||||||||||| ||||
Sbjct: 71 cagattcgttgtactaggatgtttcac 45
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||| |||||| || |||||| || |||||| ||| || ||||| ||| |||
Sbjct: 43 atgtgacacattctaatataatgaatctagatatagagcctgtccaaattcgctgtgcta 102
Query: 114 ggatgtgtcac 124
|||||| ||||
Sbjct: 103 ggatgtatcac 113
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
|||||||| |||||||||||| ||| |||||| | |||||| |||||| || |||||
Sbjct: 115 atgtgacatatcctaatacaataaatttggacagaccgtatgtctagattcattatacta 56
Query: 114 ggatgtgtcac 124
|||| ||||||
Sbjct: 55 ggatatgtcac 45
>RF00906;MIR1122;AACV01018687.1/6312-6175 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacata 88
||||||||||| ||| ||||||||||||| |||||
Sbjct: 97 atgtgacacattctattacaacgaatctgaacata 63
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 91 gtatgtacagattcgttgtactaggatgtgtcac 124
|||||| ||||||||||||| ||| |||||||||
Sbjct: 62 gtatgttcagattcgttgtaatagaatgtgtcac 95
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| || ||||||||| ||||| | ||||| || ||| |||||||||
Sbjct: 113 atgtgacacatcctagtaaaacgaatctagacat-gcatatgttcatatttgttgtacta 55
Query: 114 ggatgtg 120
| |||||
Sbjct: 54 gaatgtg 48
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 99 agattcgttgtactaggatgtgtcac 124
||||||||| ||||||||||||||||
Sbjct: 86 agattcgttttactaggatgtgtcac 111
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 99 agattcgttgtactaggatgtgtcac 124
|||||||| |||||||||||||||||
Sbjct: 70 agattcgtagtactaggatgtgtcac 45
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 98 cagattcgttgtactaggatgtgtca 123
||||||||||||||||| ||||||||
Sbjct: 71 cagattcgttgtactagaatgtgtca 46
>RF00906;MIR1122;ABRL01001744.1/6692-6848 65489:Oryza barthii
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||||||||| |||| |||||||| | | ||| || ||||||| ||||||||
Sbjct: 115 atgtgacacatcctaggacaatgaatctgggctgacagtttgcccagattcattgtacta 56
Query: 114 ggatgtgtca 123
|||| |||||
Sbjct: 55 ggatatgtca 46
>RF00906;MIR1122;AP008217.1/4273192-4273317 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 101 attcgttgtactaggatgtgtc 122
||||||||||||||||||||||
Sbjct: 80 attcgttgtactaggatgtgtc 101
>RF00906;MIR1122;AAAA02020879.1/5788-5634 39946:Oryza sativa Indica
Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 55 tgtgacacatcctaatacaacgaatctggacata 88
|||||||||| ||||||| | |||||||||||||
Sbjct: 112 tgtgacacattctaatactatgaatctggacata 79
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacat 87
||||||||| ||||| ||||| ||||||||||||
Sbjct: 43 atgtgacacgtcctagtacaatgaatctggacat 76
>RF00906;MIR1122;EU337975.1/586-742 39946:Oryza sativa Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacatagagtatgtacagattcgttgtacta 113
||||||||| || || ||||||||||||||||| || |||| | ||||||| ||||||
Sbjct: 115 atgtgacacttcatagtacaacgaatctggacagtaagcatgttcggattcgtggtacta 56
Query: 114 ggatgtgtcacgtc 127
|| ||||| ||||
Sbjct: 55 tgaagtgtctcgtc 42
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 99 agattcgttgtactaggatgtgtcac 124
|||||||| |||||||||||||||||
Sbjct: 53 agattcgtagtactaggatgtgtcac 78
>RF00906;MIR1122;AAAA02024971.1/2546-2390 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 54 atgtgacacatcctaatacaacgaatctggacat 87
||||||| |||||||||| ||||||||||||||
Sbjct: 115 atgtgacgtatcctaatactacgaatctggacat 82
>RF00906;MIR1122;AAAA02031413.1/6510-6355 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 99 agattcgttgtactaggatgtgtcac 124
||||||||||||||||||||| ||||
Sbjct: 87 agattcgttgtactaggatgtatcac 112
>RF00906;MIR1122;AL731623.3/93743-93613 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 54 atgtgacacatcctaatacaacgaatctggacat 87
||||||||||||||||||| | |||||| |||||
Sbjct: 44 atgtgacacatcctaatacgatgaatctagacat 77
>RF00906;MIR1122;AP002908.2/68380-68536 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 70 tacaacgaatctggacatagagtatgtacagattcgttgtactaggatgtgtca 123
||||||||||||||||| || ||| |||||||||||||||| || ||||||
Sbjct: 59 tacaacgaatctggacagtaagcctgtccagattcgttgtactatgaagtgtca 112
