miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AABR04092870.1/4530-4624 10116:Rattus norvegicus
(Norway rat)
Length = 95
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 154 gatgaggatgaggatgaggatgagaatga 182
|||||||||||||||||||||||| ||||
Sbjct: 5 gatgaggatgaggatgaggatgaggatga 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 156 tgaggatgaggatgaggatgagaatga 182
|||||||||||||||||||||| ||||
Sbjct: 1 tgaggatgaggatgaggatgaggatga 27
>RF01059;mir-598;AAWZ01037963.1/2163-2026 28377:Anolis carolinensis
(green anole)
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 154 gatgaggatgaggatgaggatga 176
|||||||||||||||||||||||
Sbjct: 131 gatgaggatgaggatgaggatga 109
>RF01059;mir-598;AAGJ02151189.1/717-631 7668:Strongylocentrotus
purpuratus
Length = 87
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 taatggtgatgaggatgaggatgaggatga 176
|||||||||||| ||||||||||| |||||
Sbjct: 81 taatggtgatgaagatgaggatgatgatga 52
>RF01059;mir-598;ABQO011143135.1/763-829 9315:Macropus eugenii
(tammar wallaby)
Length = 67
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 atgaggatgaggatgaggatga 176
||||||||||||||||||||||
Sbjct: 3 atgaggatgaggatgaggatga 24
