miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 246 bits (124), Expect = 6e-65
Identities = 124/124 (100%)
Strand = Plus / Minus
Query: 1 gtagtactccctccgtcccataatataagggattttggacagatgtgagacgtccagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gtagtactccctccgtcccataatataagggattttggacagatgtgagacgtccagatt 66
Query: 61 cattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagt 6
Query: 121 acta 124
||||
Sbjct: 5 acta 2
Score = 77.8 bits (39), Expect = 3e-14
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatgtgagacgtccagattc 61
|||||||||||| ||||||||||| |||||||| ||| |||||||| || ||| || |
Sbjct: 2 tagtactccctcagtcccataatacaagggattatgggtagatgtgacacatcctaatac 61
Query: 62 attgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
| || || ||| || |||||||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 62 aatgaatctggacgtctcacatctgtccaaaatcccttatattatgggacggagggagta 121
Query: 122 cta 124
|||
Sbjct: 122 cta 124
>RF00906;MIR1122;AAAA02018504.1/8341-8217 39946:Oryza sativa Indica
Group
Length = 125
Score = 238 bits (120), Expect = 1e-62
Identities = 123/124 (99%)
Strand = Plus / Plus
Query: 1 gtagtactccctccgtcccataatataagggattttggacagatgtgagacgtccagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagtactccctccgtcccataatataagggattttggacagatgtgagacgtccagatt 60
Query: 61 cattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattgtattaggatgtgtcatatctacccataatcccttgtattatgggactgagggagt 120
Query: 121 acta 124
||||
Sbjct: 121 acta 124
Score = 69.9 bits (35), Expect = 8e-12
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatgtgagacgtccagattc 61
|||||||||||| ||||||||||| |||||||| ||| |||| ||| || ||| || |
Sbjct: 124 tagtactccctcagtcccataatacaagggattatgggtagatatgacacatcctaatac 65
Query: 62 attgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
| || || ||| || |||||||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 64 aatgaatctggacgtctcacatctgtccaaaatcccttatattatgggacggagggagta 5
Query: 122 cta 124
|||
Sbjct: 4 cta 2
>RF00906;MIR1122;AL606607.3/13860-13742 39947:Oryza sativa Japonica
Group
Length = 119
Score = 109 bits (55), Expect = 9e-24
Identities = 102/118 (86%), Gaps = 6/118 (5%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
|||||||||||||||||||||||| ||||||||| ||||||| || |||||||
Sbjct: 115 tactccctccgtcccataatataaaggattttgggtggatgtgacac------attcatt 62
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagtac 122
||| |||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 61 gtactaggatgtgtcacatccacccaaaatcccttatattatgggacggagggagtac 4
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccataatataagggattttgg 38
>RF00906;MIR1122;AACV01010090.1/14054-14174 39947:Oryza sativa
Japonica Group
Length = 121
Score = 99.6 bits (50), Expect = 8e-21
Identities = 103/120 (85%), Gaps = 8/120 (6%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
|||||||||||||||||||||||| ||||||||| ||||||| || |||||||
Sbjct: 117 tactccctccgtcccataatataaaggattttgggtggatgtgacac------attcatt 64
Query: 65 gtattaggatgtgtcacatct--acccataatcccttgtattatgggactgagggagtac 122
||| ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 63 gtactaggatgtgtcacatctctacccaaaatcccttatattatgggacggagggagtac 4
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccataatataagggattttgg 38
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||||||| |||||| ||||||||| ||||| |||||||| |||||||||||
Sbjct: 84 gtccagattcattgtactaggatatgtcacatccacccaaaatcccttatattatgggac 143
Query: 112 tgagggagta 121
|||||||||
Sbjct: 144 ggagggagta 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttgg 120
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||| ||| |||||||||| |||||||||||| ||| |||||||| |||||||||||
Sbjct: 74 gtccaaatttattgtattagaatgtgtcacatccacctcaaatcccttatattatgggac 15
Query: 112 tgagggagtact 123
||||||||||
Sbjct: 14 gaagggagtact 3
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggattt 35
|||||||||| ||||||||||||||||||||||
Sbjct: 3 agtactcccttcgtcccataatataagggattt 35
>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
Indica Group
Length = 165
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||| ||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||
Sbjct: 92 gtccatattcattgtattaggatgtgtcatatccacccaaaatcccttatattatgggac 151
Query: 112 tgagggagta 121
|||||||||
Sbjct: 152 ggagggagta 161
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 161 tactccctccgtcccataatataagggattttgg 128
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgag 49
|||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 5 tactccctccgtcccataatataaaggattttggatggatgtgag 49
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 53 tccagattcattgtattaggatgtgtcacat 83
|||||||||||||||||||||||||||||||
Sbjct: 81 tccagattcattgtattaggatgtgtcacat 51
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 53 tccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggact 112
||||||||||||||| |||||||||||||||| ||| | |||||||| |||||||||||
Sbjct: 73 tccagattcattgtactaggatgtgtcacatccacctaaaatcccttatattatgggaca 14
Query: 113 gagggagtac 122
||||||||||
Sbjct: 13 gagggagtac 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggatttt 36
|||||||||| ||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccataatataagggatttt 36
>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa Japonica
Group
Length = 165
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||| ||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||
Sbjct: 74 gtccatattcattgtattaggatgtgtcatatccacccaaaatcccttatattatgggac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 ggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttgg 38
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgag 49
|||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 161 tactccctccgtcccataatataaaggattttggatggatgtgag 117
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 53 tccagattcattgtattaggatgtgtcacat 83
|||||||||||||||||||||||||||||||
Sbjct: 85 tccagattcattgtattaggatgtgtcacat 115
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 85.7 bits (43), Expect = 1e-16
Identities = 99/117 (84%), Gaps = 8/117 (6%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
|||||||||||||||||||||||||||||||||| | | | |||||||||| ||
Sbjct: 113 tactccctccgtcccataatataagggattttgg---ggtct-----gtccagattcgtt 62
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||| |||||||||| ||||| ||||| |||||||| || |||||||| |||||||||
Sbjct: 61 gtactaggatgtgttacatccacccaaaatcccttataatatgggacggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccatattataagggattttgg 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 87 cccataatcccttgtattatgggactgagggagta 121
|||| |||||||| ||||||||||| |||||||||
Sbjct: 79 cccaaaatcccttatattatgggacggagggagta 113
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||| |||||||||||||||||||| ||||| ||||| || ||||| |||||
Sbjct: 39 gtccagattcatcgtattaggatgtgtcacatccacccaaaatcctttatattacgggac 98
Query: 112 tgagggagtac 122
||||||||||
Sbjct: 99 ggagggagtac 109
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||| |||||||||
Sbjct: 109 gtactccctccgtcccgtaatataaaggattttgg 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 93 atcccttgtattatgggactgagggagtac 122
||||||| ||||||||||| ||||||||||
Sbjct: 33 atcccttatattatgggacggagggagtac 4
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
|||||||||||| |||||||||||||||| ||||| |||||||| |||| |||||| |||
Sbjct: 70 agattcattgtactaggatgtgtcacatccacccaaaatcccttatattttgggacggag 11
Query: 116 ggagta 121
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagggattttgg 38
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagtact 123
|||||| ||||||||| ||||| |||| ||| |||| |||||| |||||||||||
Sbjct: 79 taggatatgtcacatccacccaaaatctcttatattttgggacggagggagtact 133
>RF00906;MIR1122;AACV01009198.1/25225-25351 39947:Oryza sativa
Japonica Group
Length = 127
Score = 83.8 bits (42), Expect = 5e-16
Identities = 102/121 (84%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtgagacgt--ccagattc 61
||||||||||||| ||||||||||||| ||||| ||||||| | || ||||||||
Sbjct: 4 gtactccctccgttccataatataaggaattttatgtggatgtgacaggtgtccagattc 63
Query: 62 attgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||| || |||||||||||||||| ||||| |||| || ||||||||||| |||||||||
Sbjct: 64 attatactaggatgtgtcacatccacccaaaatcttttctattatgggacggagggagta 123
Query: 122 c 122
|
Sbjct: 124 c 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||| || ||||||||
Sbjct: 124 gtactccctccgtcccataatagaaaagattttgg 90
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||||||| || |||||||||||||||| | ||| |||||||| |||||||||||
Sbjct: 84 gtccagattcattatactaggatgtgtcacatccatccaaaatcccttatattatgggac 143
Query: 112 tgagggagta 121
|||||||||
Sbjct: 144 ggagggagta 153
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 153 tactccctccgtcccataatataagggattttggatggatgtga 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||||||| || | ||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 74 gtccagattcattataccaagatgtgtcacatccatccaaaatcccttatactatgggac 15
Query: 112 tgagggagtac 122
||||||||||
Sbjct: 14 agagggagtac 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||| |||||||| |||||||||||||||| |||||||
Sbjct: 4 gtactccctctgtcccatagtataagggattttggatggatgtga 48
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa Japonica
Group
Length = 133
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||||||| ||||| |||||||||| |||| |||||||| |||||||||||
Sbjct: 74 gtccagattcattgtactaggacgtgtcacatccaccccaaatcccttatattatgggac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 ggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattt 35
>RF00906;MIR1122;AP004994.2/6845-6714 39947:Oryza sativa Japonica
Group
Length = 132
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||||||| ||||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 59 gtccagattcattgtactaggatgcgtcacatccacctaaaatcccttatattatgggac 118
Query: 112 tgagggagta 121
|||||||||
Sbjct: 119 ggagggagta 128
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtcccataatataagggatttt 97
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||| ||||||||| ||||| |||||||| |||||||||||
Sbjct: 53 taggatatgtcacatccacccaaaatcccttatattatgggac 11
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||| |||||| |||||| ||||||||| ||||| |||||||| |||||||||||
Sbjct: 84 gtccagattgattgtactaggatatgtcacatccacccaaaatcccttatattatgggac 143
Query: 112 tgagggagta 121
|||||||||
Sbjct: 144 ggagggagta 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttgg 120
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||| |||||| || |||||||||||| ||||| |||||||| |||||| |||
Sbjct: 74 gtccagatttattgtactatcatgtgtcacatccacccaaaatcccttatattatatgac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 ggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtcatataatataagggattttgg 38
>RF00906;MIR1122;AP004314.3/140580-140716 39947:Oryza sativa
Japonica Group
Length = 137
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgg 108
||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 74 gtccagatttattgtattaggatgtgtcacatctactcaaaatcccttatattatgg 18
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||| |||||||||||||||||
Sbjct: 133 tactccctccgtccaataatataagggatttt 102
>RF00906;MIR1122;AACV01001688.1/277-406 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 8e-15
Identities = 103/124 (83%), Gaps = 5/124 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgt-----ccagat 59
|||||||||||||| ||||||||||||||||||| ||||||| | | ||||||
Sbjct: 5 tactccctccgtcctataatataagggattttgggtggatgtgacatattctatccagat 64
Query: 60 tcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggag 119
| ||||||||| ||||||||| |||||| | ||| |||| ||||||||||| |||||||
Sbjct: 65 ttattgtattaagatgtgtcatttctaccaaaaattccttatattatgggacggagggag 124
Query: 120 tact 123
||||
Sbjct: 125 tact 128
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataagggatttt 36
|||||||||||||||||||||||||||| |||||
Sbjct: 128 agtactccctccgtcccataatataaggaatttt 95
>RF00906;MIR1122;AC140005.2/42932-42813 39947:Oryza sativa Japonica
Group
Length = 120
Score = 79.8 bits (40), Expect = 8e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 116 tactccctccgtcccataatataagggattttggagagatgtga 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 74 tgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 69 tgtgtcacatctctccaaaatcccttatattatgggacggagggagta 116
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||| |||||||||| ||||||||
Sbjct: 5 tactccctccgtctcataatataaaggattttg 37
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa Indica
Group
Length = 135
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 48 agacgtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatg 107
|||||||||||||||||||| ||||| |||||||||| ||||| |||| ||| |||||||
Sbjct: 58 agacgtccagattcattgtactaggacgtgtcacatccacccaaaatctcttatattatg 117
Query: 108 ggactgagggagtac 122
| || || |||||||
Sbjct: 118 gaacggatggagtac 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtgagacgtcc 55
||||||| ||||| |||||||||||| |||||||| ||||||| ||||||
Sbjct: 132 gtactccatccgttccataatataagagattttgggtggatgtgacacgtcc 81
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacggagggagta 5
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa Indica
Group
Length = 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||||||| |||||||||||| || ||| | |||||||| |||||||||||
Sbjct: 37 gtccagattcattgtactaggatgtgtcatattcacctaaaatcccttatattatgggac 96
Query: 112 tgagggagta 121
|||||||||
Sbjct: 97 ggagggagta 106
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 106 tactccctccgtcccataatataagggatttt 75
>RF00906;MIR1122;AAAA02022570.1/2584-2456 39946:Oryza sativa Indica
Group
Length = 129
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||||||| || ||||||||||| |||| |||||| ||||||| |||||||||||
Sbjct: 74 gtccagattcattttactaggatgtgtcgcatccacccattatcccttatattatgggac 15
Query: 112 tgagggagta 121
|| ||||||
Sbjct: 14 ggatggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggat 33
|||||| ||||||||||||||||||||||
Sbjct: 5 tactccatccgtcccataatataagggat 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 72 gatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||| |||||| ||| || ||||||||||| |||||||||
Sbjct: 76 gatgtgtcacatgcacccattatctattatattatgggacggagggagta 125
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa Japonica
Group
Length = 157
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
||||||||| || |||||| ||||||||| ||||| |||||||| ||||||||||| |||
Sbjct: 70 agattcattatactaggatatgtcacatccacccaaaatcccttatattatgggacggag 11
Query: 116 ggagta 121
||||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttgg 38
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||| ||| ||||||||||||| ||||||||| ||| | |||| || |||||||||||
Sbjct: 84 gtccaaatttattgtattaggatatgtcacatccacctaaaatcaattatattatgggac 143
Query: 112 tgagggagtact 123
|||||||||||
Sbjct: 144 ggagggagtact 155
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataa 28
||||||||||||||||||||||||||
Sbjct: 155 agtactccctccgtcccataatataa 130
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||||||| |||||||||||||||| | | | |||||||| |||||||||||
Sbjct: 71 gtccagattcattgtactaggatgtgtcacatccatctaaaatcccttatattatgggac 130
Query: 112 tgagggagta 121
|| ||||||
Sbjct: 131 ggatggagta 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||| |||||||||||||||||||||||||
Sbjct: 140 tactccatccgtcccataatataagggatttt 109
>RF00906;MIR1122;AAAA02032829.1/30310-30153 39946:Oryza sativa
Indica Group
Length = 158
Score = 73.8 bits (37), Expect = 5e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataagggattttgga 39
|||||||||||||||||||||||||||||||||||||
Sbjct: 156 agtactccctccgtcccataatataagggattttgga 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||| ||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtcccataatataagggattttgga 39
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtact 123
|||||||| ||||||||||| |||||||||||
Sbjct: 125 aatcccttatattatgggacggagggagtact 156
>RF00906;MIR1122;AAAA02009744.1/2145-2299 39946:Oryza sativa Indica
Group
Length = 155
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 151 tactccctccgtcacataatataagggattttggagagatgtga 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcctataatataagggatttt 36
>RF00906;MIR1122;ABRL01001744.1/6692-6848 65489:Oryza barthii
Length = 157
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 54 ccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactg 113
||||||||||||| |||||||||||||||| ||||| |||| ||| ||||||||||| |
Sbjct: 86 ccagattcattgtcctaggatgtgtcacatccacccaaaatctcttatattatgggacgg 145
Query: 114 agggagta 121
| ||||||
Sbjct: 146 aaggagta 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 actccctccgtcccataatataagggattt 35
|||| |||||||||||||||||||||||||
Sbjct: 6 actctctccgtcccataatataagggattt 35
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||| |||||||||||||||||| ||||||||
Sbjct: 153 tactccttccgtcccataatataagagattttgg 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 54 ccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactg 113
|||||||||||||| |||||| ||||| ||| | | |||||||| ||||||||||| |
Sbjct: 72 ccagattcattgtactaggatatgtcatatcctctccaaatcccttatattatgggacgg 13
Query: 114 agggagt 120
|| ||||
Sbjct: 12 agagagt 6
>RF00906;MIR1122;AP008215.1/10902261-10902381 39947:Oryza sativa
Japonica Group
Length = 121
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgga 39
||||||||||||||||||||||||||||||||||||
Sbjct: 118 gtactccctccgtcccataatataagggattttgga 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
|||||| |||||| |||||||||||||||||||||| |||||||
Sbjct: 4 gtactctctccgttccataatataagggattttggagggatgtga 48
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtac 122
|||||||| ||||||||||| ||||||||||
Sbjct: 88 aatcccttatattatgggacggagggagtac 118
>RF00906;MIR1122;AACV01022450.1/23564-23424 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 137 tactccctccgtcccataatataagggattttggagggatgtga 94
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 5 tactccctctgtcccataatataagcgattttggagggatgtga 48
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||| ||||||||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 85 taggatatgtcacatccctccaaaatcccttatattatgggacggagggagta 137
>RF00906;MIR1122;AC130604.4/103163-103007 39947:Oryza sativa
Japonica Group
Length = 157
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 153 tactccctccgtctcataatataagggattttggagagatgtga 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 55 cagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactga 114
||||||||| ||| |||| |||||||||||| ||| |||||||| ||||||| ||| ||
Sbjct: 87 cagattcatagtactaggttgtgtcacatctctccaaaatcccttatattatgagacgga 146
Query: 115 gggagta 121
|||||||
Sbjct: 147 gggagta 153
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 12 tccgtcccataatataagggattttggacagatgtga 48
|||||||| ||||||||||||||||||| ||||||||
Sbjct: 12 tccgtcccgtaatataagggattttggagagatgtga 48
>RF00906;MIR1122;AP008216.1/5042324-5042220 39947:Oryza sativa
Japonica Group
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 101 tactccctccgtcccataatataagggattttagagagatgtga 58
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 72 aatcccttatattatgggacggagggagta 101
>RF00906;MIR1122;AP004190.3/105219-105064 39947:Oryza sativa
Japonica Group
Length = 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 152 tactccctctgtcccataatataagggattttggatagatgtga 109
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 73 atgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 104 atgtgtcacatctatccaaaatcccttatattatgggacagagggagta 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctatgtcccataatataagggatttt 36
>RF00906;MIR1122;AACV01018737.1/24214-24370 39947:Oryza sativa
Japonica Group
Length = 157
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtcccataatataagggattttggagggatgtga 48
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||| ||||| ||||||||||| |||||| |||||||
Sbjct: 154 gtactccctccatcccaaaatataagggagtttggagggatgtga 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacggagggagta 5
>RF00906;MIR1122;ABRL01001363.1/4171-4043 65489:Oryza barthii
Length = 129
Score = 69.9 bits (35), Expect = 8e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 53 tccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggact 112
|||| |||| ||||| |||||||||||||||| ||||| |||||||| ||||||||||
Sbjct: 73 tccatattcgttgtactaggatgtgtcacatccacccaaaatcccttatattatgggata 14
Query: 113 gagggagtact 123
|| ||||||||
Sbjct: 13 gaaggagtact 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggattttgg 38
|||||||| || |||||||||||||||||||||||
Sbjct: 3 agtactccttctatcccataatataagggattttgg 38
>RF00906;MIR1122;AL662954.2/81377-81511 39947:Oryza sativa Japonica
Group
Length = 135
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 134 tagtactccctccgtcccataatataacggattttggagggatgtga 88
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttgga 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggatttt 36
||||||||||| |||||| ||||||||| |||||
Sbjct: 3 agtactccctctgtcccaaaatataaggaatttt 36
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 124 aatcccttatattatgggacggagggagta 153
>RF00906;MIR1122;AACV01010673.1/7331-7451 39947:Oryza sativa
Japonica Group
Length = 121
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggatttt 36
|||||||||||||||||||||||||||||||||||
Sbjct: 120 tagtactccctccgtcccataatataagggatttt 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtacta 124
|||||||| ||||||||||| ||||||||||||
Sbjct: 88 aatcccttatattatgggacggagggagtacta 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||| |||| |||||||||||||||||||||
Sbjct: 5 tactctctccatcccataatataagggatttt 36
>RF00906;MIR1122;AACV01015388.1/34183-34313 39947:Oryza sativa
Japonica Group
Length = 131
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatggga 110
|||||||||||||| | || |||||||||||||||||||| ||||||| |||||||||
Sbjct: 74 gtccagattcattgcactatgatgtgtcacatctacccattatcccttacattatggga 16
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 72 gatgtgtcacatctacccataatcccttgtattatgggactgagggagtac 122
|||||||||||| |||||| || |||| ||||||||||| ||||||||||
Sbjct: 78 gatgtgtcacattcacccattattccttatattatgggacggagggagtac 128
>RF00906;MIR1122;AAAA02017484.1/6201-6342 39946:Oryza sativa Indica
Group
Length = 142
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtcccataatataagggattttgga 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtcccataatataacggatttt 36
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 109 aatcccttatattatgggacggagggagta 138
>RF00906;MIR1122;AP008216.1/3083672-3083805 39947:Oryza sativa
Japonica Group
Length = 134
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 55 cagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactga 114
|||||||||| ||||||||||||||||||| ||| | |||| ||| ||||||||||| ||
Sbjct: 71 cagattcattatattaggatgtgtcacatccacctaaaatctcttatattatgggacaga 12
Query: 115 gggagta 121
| |||||
Sbjct: 11 gagagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||||||| | ||| |||| ||| |||||||||| |||||||||
Sbjct: 78 taggatgtgtcacatcaatccaaaatctcttatattatgggatagagggagta 130
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 69.9 bits (35), Expect = 8e-12
Identities = 81/97 (83%), Gaps = 7/97 (7%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataagggattttggacagatgtgagacgtccagattca 62
|||||||||||||||||| | ||||||||||||||| | || |||||||||||
Sbjct: 112 agtactccctccgtcccaaagtataagggattttgggcgga-------cgtccagattcg 60
Query: 63 ttgtattaggatgtgtcacatctacccataatccctt 99
| ||| |||||||||||||||| ||||| ||||||||
Sbjct: 59 tagtactaggatgtgtcacatccacccaaaatccctt 23
>RF00906;MIR1122;AC119290.2/13041-12931 39947:Oryza sativa Japonica
Group
Length = 111
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 53 tccagattcattgtattaggatgtgtcacatctacccataatccctt 99
||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 62 tccagattcattgtaataggatgtgtcacatccacccaaaatccctt 108
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 58 attcattgtattaggatgtgtcacatctacccataatccctt 99
|||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 45 attcattgtactaggatgtgtcacatccacccaaaatccctt 4
>RF00906;MIR1122;AP004687.2/98890-98773 39947:Oryza sativa Japonica
Group
Length = 118
Score = 69.9 bits (35), Expect = 8e-12
Identities = 98/120 (81%), Gaps = 13/120 (10%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
|||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttggtc----------tgtccagattcatt 54
Query: 65 gtattagg---atgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||| || | |||||||| ||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 55 gtactaagaatatgtgtcatatccacccaaaatcccttatattatgggacggagggagta 114
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 114 tactccctccgtcccataatataagggattttgg 81
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacggagggagta 5
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 69.9 bits (35), Expect = 8e-12
Identities = 100/121 (82%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtgagac---gtccagatt 60
||||||||||||||||| ||||||||||||||||| |||||| | |||||||||
Sbjct: 4 gtactccctccgtcccaaaatataagggattttgggtgaatgtgactctctgtccagatt 63
Query: 61 cattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagt 120
|||||| ||||| |||||| ||| ||||| |||| ||| |||| |||||| || |||||
Sbjct: 64 cattgtcctaggaagtgtcatatccacccaaaatctcttatattttgggacggatggagt 123
Query: 121 a 121
|
Sbjct: 124 a 124
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 69.9 bits (35), Expect = 8e-12
Identities = 103/126 (81%), Gaps = 6/126 (4%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagac------gtccaga 58
||||| ||||||||| ||||||||||||||||| ||||||| || |||||||
Sbjct: 5 tactctctccgtccctaaatataagggattttggttggatgtgacacatcctagtccaga 64
Query: 59 ttcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgaggga 118
||| ||||| |||||||||||||||| | ||| |||| ||| |||| ||||| ||||||
Sbjct: 65 ttcgttgtactaggatgtgtcacatccaaccaaaatctcttatatttagggacggaggga 124
Query: 119 gtacta 124
||||||
Sbjct: 125 gtacta 130
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||| |||||||| ||||||||
Sbjct: 130 tagtactccctccgtccctaaatataagagattttgg 94
>RF00906;MIR1122;AACV01024035.1/14460-14553 39947:Oryza sativa
Japonica Group
Length = 94
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||||||||||||||||
Sbjct: 91 gtactccctccgtcccataatataagggattttgg 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctctctcccataatataagggattttgg 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 81 catctacccataatcccttgtattatgggactgagggagtac 122
|||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct: 50 catcgacccaaaatcccttatattatgggacggagggagtac 91
>RF00906;MIR1122;AP008211.1/23389262-23389121 39947:Oryza sativa
Japonica Group
Length = 142
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtcccataatataagggattttgga 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtcccataatataacggattttgga 39
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 109 aatcccttatattatgggacggagggagta 138
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa Japonica
Group
Length = 157
Score = 69.9 bits (35), Expect = 8e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagggattttgga 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||| |||||| ||||||||| |||||||| |||||||
Sbjct: 3 agtactccctctgtcccaaaatataaggaattttggagggatgtga 48
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 124 aatcccttatattatgggacggagggagta 153
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa Indica
Group
Length = 238
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||||||||||||
Sbjct: 238 gtactccctccgtcccataatataagggattttg 205
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||| ||||||||||||||||||||||||||||
Sbjct: 2 tacttcctccgtcccataatataagggattttg 34
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtac 122
|||||||| ||||||||||| ||||||||||
Sbjct: 208 aatcccttatattatgggacggagggagtac 238
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa
Japonica Group
Length = 242
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||||||||||||
Sbjct: 1 gtactccctccgtcccataatataagggattttg 34
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||| | ||||||||||||||||||||
Sbjct: 241 tactccctccattccataatataagggattttg 209
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagtac 122
|||||||| ||||||||||| ||||||||||
Sbjct: 31 aatcccttatattatgggacggagggagtac 1
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||||||||||||
Sbjct: 240 gtactccctccgtcccataatataagggattttg 207
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||| ||||||||||||||||||||||||
Sbjct: 2 tactccatccgtcccataatataagggattt 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtac 122
|||||||| ||||||||||| ||||||||||
Sbjct: 210 aatcccttatattatgggacggagggagtac 240
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||||||||||||
Sbjct: 244 gtactccctccgtcccataatataagggattttg 211
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtac 122
|||||||| ||||||||||| ||||||||||
Sbjct: 214 aatcccttatattatgggacggagggagtac 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF00906;MIR1122;AACV01018155.1/14353-14197 39947:Oryza sativa
Japonica Group
Length = 157
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||| |||||| |||||| ||||||||| || || |||||| | |||||||||||
Sbjct: 74 gtccagattgattgtactaggatatgtcacatccactcaaaatcccgtatattatgggac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 ggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtcccataatatacgggattttg 37
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||| |||||||||||||||||||
Sbjct: 153 tactccctccgtcatataatataagggattttgg 120
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||| |||||| |||||||||||||||| | ||| |||||||| |||| |||||
Sbjct: 83 gtccagatttattgtactaggatgtgtcacatccaaccaaaatcccttatatttagggac 142
Query: 112 tgagggagta 121
|||||||||
Sbjct: 143 ggagggagta 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccctaaatataagggattttgg 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 152 tactccctccgtccctaaatataagggattttgg 119
>RF00906;MIR1122;AC215729.1/5950-6041 4537:Oryza punctata
Length = 92
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttgg 38
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||| |||||||||||||||||||||||||||||
Sbjct: 88 tactacctccgtcccataatataagggattttgg 55
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacggagggagta 5
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttgg 38
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatggga 110
|||||||| |||||||||||||||||||| ||| | |||| ||| ||||||||||
Sbjct: 88 agattcatagtattaggatgtgtcacatccacctaaaatctcttatattatggga 142
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 72 gatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||||||||| ||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 54 gatgtgtcatatccacccaaaatcccttatattatgggacggagggagta 5
>RF00906;MIR1122;AAAA02035091.1/6870-7011 39946:Oryza sativa Indica
Group
Length = 142
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttgga 39
||||||||||||| ||||||||||||||||||||||||
Sbjct: 141 tagtactccctccatcccataatataagggattttgga 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 7 ctccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||| |||||||| |||||||| |||||||
Sbjct: 7 ctccctccgtcccaaaatataagaaattttggagggatgtga 48
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 7 ctccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7 ctccctccgtcccataatataagggattttggagggatgtga 48
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||| ||||||||||| |||||||| ||||||||| |||||||
Sbjct: 151 tacttcctccgtcccaaaatataagagattttggagggatgtga 108
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||||||||||||||||| ||||||||| | ||| |||||||| |||| ||||
Sbjct: 83 gtccagattcattgtattaggatatgtcacatccaaccaaaatcccttatatttagggat 142
Query: 112 tgagggagta 121
|||||||||
Sbjct: 143 ggagggagta 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||| |||| |||||||||||||||||
Sbjct: 152 tactccctccatccctaaatataagggattttgg 119
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattttgg 38
Score = 61.9 bits (31), Expect = 2e-09
Identities = 63/73 (86%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattagga---tgtgtcacatctacccataatcccttgtattatgg 108
|||||||||||||||| || || ||||||| ||| ||||| |||||||| ||||||||
Sbjct: 77 gtccagattcattgtactaagaatatgtgtcatatccacccaaaatcccttatattatgg 18
Query: 109 gactgagggagta 121
||| |||||||||
Sbjct: 17 gacggagggagta 5
>RF00906;MIR1122;AP008213.1/6090564-6090409 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 3 agtactccctccgtcccatgatataagggattttggagggatgtga 48
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 152 tactccctccatcccataatataagggattttggagggatgtga 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagtact 123
|||||| ||||||||| ||| |||||||| ||| ||||||| |||||||||||
Sbjct: 57 taggatatgtcacatccctccaaaatcccttatatcatgggacggagggagtact 3
>RF00906;MIR1122;AAAA02005800.1/23183-23322 39946:Oryza sativa
Indica Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
||||| |||||| ||||||| |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 70 agatttattgtactaggatgcgtcacatccacccaaaatcctttatattatgggacggag 11
Query: 116 ggagta 121
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtcccataatataaaggattttgg 38
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||| ||||||||||| ||||||
Sbjct: 136 tactccctccgtctcataatataagagatttt 105
>RF00906;MIR1122;AP002865.1/97444-97566 39947:Oryza sativa Japonica
Group
Length = 123
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 119 tactccctccgtcccataatataagggattttgg 86
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||||||| ||| |||||||| ||||||||||| |||||||||
Sbjct: 67 taggatgtgtcacatcccaccaaaatcccttatattatgggacggagggagta 119
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccttctgtcccataatataagggattttggaaggatgtga 48
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 108 tactccctccgtcccataatataagggattttgg 75
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 73 atgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||| ||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 60 atgtatcacatccacccaaaatcccttatattatgggacggagggagta 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtcccataatataagtaattttgg 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 75 gtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||| ||||| ||| ||| ||||||||||| |||||||||
Sbjct: 51 gtgtcacatccacccaaaattacttatattatgggacggagggagta 5
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
|||||||||||| ||||||| |||||||| ||| | |||||||| |||||| |||| |||
Sbjct: 70 agattcattgtactaggatgcgtcacatccacctaaaatcccttatattataggacagag 11
Query: 116 ggagta 121
||||||
Sbjct: 10 ggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||| ||||||
Sbjct: 136 tactccctccgtcccataatataagagatttt 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||| |||| |||||||||||||||||
Sbjct: 5 tactccctctgtcctataatataagggatttt 36
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa Japonica
Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||||||||||||||||| ||||||||| | ||| |||||||| |||| ||||
Sbjct: 83 gtccagattcattgtattaggatatgtcacatccaaccaaaatcccttatatttagggat 142
Query: 112 tgagggagta 121
|||||||||
Sbjct: 143 ggagggagta 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||||||| || |||||| || |||||| | ||| |||||||| |||| |||||
Sbjct: 74 gtccagattcattatactaggatatgccacatccaaccaaaatcccttatatttagggac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 ggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccctaaatataagggattttgg 38
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||| |||| |||||||||||||||||
Sbjct: 152 tactccctccatccctaaatataagggattttgg 119
>RF00906;MIR1122;AP008211.1/6609928-6610066 39947:Oryza sativa
Japonica Group
Length = 139
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||| || |||||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 66 gtccagattcatcatactaggatgtgttacatccacccaaaatcccttatattatgggac 125
Query: 112 tgagggagta 121
|| ||||||
Sbjct: 126 ggatggagta 135
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||| |||||||||||||||||||||||||||
Sbjct: 135 tactccatccgtcccataatataagggattttgg 102
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgg 108
|||||||||||||||| ||||| |||| ||| ||||||||
Sbjct: 57 taggatgtgtcacatccacccaaaatctcttatattatgg 18
>RF00906;MIR1122;AAAA02020362.1/853-722 39946:Oryza sativa Indica
Group
Length = 132
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
|||||||||| | |||||||||| | ||| ||||| |||||||| ||||||||||| |||
Sbjct: 63 agattcattgcactaggatgtgttatatccacccaaaatcccttatattatgggacggag 122
Query: 116 ggagta 121
||||||
Sbjct: 123 ggagta 128
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtcccataatataagggattttgg 95
>RF00906;MIR1122;AP003940.3/16183-16061 39947:Oryza sativa Japonica
Group
Length = 123
Score = 67.9 bits (34), Expect = 3e-11
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
||||||||||||||||||||||||||||| ||||| ||||| | || ||||||| |
Sbjct: 119 tactccctccgtcccataatataagggatattggagggatgt--gctgttcagattcgta 62
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||| ||||| ||||||||| ||| || ||||| ||||||||||| |||||||||
Sbjct: 61 gtactaggaattgtcacatccctccaaaaacccttatattatgggacggagggagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 5 tactccctccgtcccataatataagggtttttggagggatgtga 48
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica Group
Length = 117
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| ||||| |||||||||||||||| ||||| | || ||| ||||||||||
Sbjct: 44 gtccagattcgttgtactaggatgtgtcacatccacccaaattctcttatattatgggat 103
Query: 112 tgagggagta 121
|||||||||
Sbjct: 104 ggagggagta 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||| |||||||||||||| || |||||
Sbjct: 113 tactccctccatcccataatataagagaatttgg 80
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 67.9 bits (34), Expect = 3e-11
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagac-gtccagattcat 63
||||||||||||| ||||||||||||||||| || ||||||| || | || |||||||
Sbjct: 5 tactccctccgtcgtataatataagggattttagagggatgtgacactgcccggattcat 64
Query: 64 tgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|| |||||||||||||||| ||| ||| |||| |||| |||||| |||||||||
Sbjct: 65 attactaggatgtgtcacatccctccaaaataccttatattttgggacggagggagta 122
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 122 tactccctccgtcccaaaatataaggtattttggagggatgtga 79
>RF00906;MIR1122;AL731884.4/124412-124271 4530:Oryza sativa (rice)
Length = 142
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttgga 39
||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tagtactccctccatcccataatataagggattttgga 39
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa
Indica Group
Length = 242
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||||| |||||||||||||||
Sbjct: 241 tactccctccgtcccacaatataagggatttt 210
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 237 tactccctccgtcccataatataagggattttg 205
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 2 tactccctccgtcccacaatataagggattttgg 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 208 aatcccttatattatgggacggagggagta 237
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica
Group
Length = 242
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||| ||||||||
Sbjct: 241 tactccctccgtcccataatataaaggattttg 209
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 242 tactccctccgtcccataatataagggattttg 210
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtactcccttcgtcccataatataagggattttg 34
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 213 aatcccttatattatgggacggagggagta 242
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||| |||||||
Sbjct: 238 tactccctccgtcccataatataagagattttg 206
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 237 tactccctccgtcccataatataagggattttg 205
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||| |||||||||||||||||||| |||||||
Sbjct: 2 tacttcctccgtcccataatataagagattttg 34
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 208 aatcccttatattatgggacggagggagta 237
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||| ||||||||| ||||||||||||||||
Sbjct: 243 tactccttccgtcccacaatataagggattttg 211
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 237 tactccctccgtcccacaatataagggattttgg 204
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccataatataagggattttg 208
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggatttt 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 211 aatcccttatattatgggacggagggagta 240
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccataatataagggattttg 208
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 6 actccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttg 34
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 211 aatcccttatattatgggacggagggagta 240
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 242 tactccctccgtcccataatataagggattttg 210
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggatttt 36
||||||||||||||||| |||||||||||||||
Sbjct: 1 gtactccctccgtcccacaatataagggatttt 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 213 aatcccttatattatgggacggagggagta 242
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa
Indica Group
Length = 243
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 242 tactccctccgtcccataatataagggatttt 211
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 213 aatcccttatattatgggacggagggagta 242
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 244 tactccctccgtcccataatataagggattttg 212
Score = 60.0 bits (30), Expect = 7e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 7 ctccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||
Sbjct: 4 ctccctccgtcccataatataagggatttt 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 215 aatcccttatattatgggacggagggagta 244
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa
Indica Group
Length = 242
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggatttt 36
||||||||||||||||| |||||||||||||||
Sbjct: 242 gtactccctccgtcccacaatataagggatttt 210
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 238 tactccctccgtcccataatataagggattttg 206
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||| |||||||
Sbjct: 2 tactccctccgtcccataatataagagattttg 34
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 209 aatcccttatattatgggacggagggagta 238
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa
Indica Group
Length = 244
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||| |||||||
Sbjct: 243 tactccctccgtcccataatataagagattttg 211
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa
Indica Group
Length = 238
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||| |||||| |||||||||||
Sbjct: 237 tactccctccgtcctataatacaagggattttg 205
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
||||||||||||||| |||| |||||||||
Sbjct: 208 aatcccttgtattataggacggagggagta 237
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa
Japonica Group
Length = 242
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| ||||||||||||||||
Sbjct: 241 tactccctccgtcccacaatataagggattttg 209
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 241 tactccctccgtcccataatataagggattttg 209
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 212 aatcccttatattatgggacggagggagta 241
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataaggga 32
||||||||||||||||||||||||||||
Sbjct: 232 tactccctccgtcccataatataaggga 205
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa
Indica Group
Length = 244
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 243 tactccctccgtcccataatataagggattttg 211
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 214 aatcccttatattatgggacggagggagta 243
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 234 tactccctccgtcccataatataagggattttg 202
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 205 aatcccttatattatgggacggagggagta 234
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttg 34
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||||||||||||
Sbjct: 241 tactccctccgtcccataatataagggattttg 209
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 212 aatcccttatattatgggacggagggagta 241
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa Indica
Group
Length = 156
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||||||||||||| ||| |||||||| |||| |||||| |||| ||||
Sbjct: 96 gtattaggatgtgtcacatctatccaaaatcccttatattttgggacggaggaagta 152
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 152 tacttcctccgtcccaaaatataagggattttggatagatgtga 109
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaatatacgggatttt 36
>RF00906;MIR1122;AACV01001911.1/38308-38471 39947:Oryza sativa
Japonica Group
Length = 164
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 4 gtactccctccgtcccataatataaggaattttggagggatgtga 48
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||| ||||||||||||||||||||||||
Sbjct: 160 tactccctccatcccataatataagggattttgga 126
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
|||||||||| ||||| || |||||||||||||| |||| || |||||||||||||
Sbjct: 121 tactccctccatcccaaaacataagggattttggttggatgggacctgtccagattcatt 62
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||| |||||| |||| ||| | ||| |||| ||| |||| |||||| |||||||||
Sbjct: 61 gtactaggatatgtcctatccaaccaaaatcacttatattttgggacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaatataagtgattttgg 38
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||||||| ||||| |||||||| |||| |||||| |||||||||
Sbjct: 101 taggatgtgtcacatccacccaaaatcccttatattttgggacggagggagta 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 153 tactccctccgtcccaaaatataagggattttgg 120
>RF00906;MIR1122;AACV01011066.1/35622-35733 39947:Oryza sativa
Japonica Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||| ||| ||| ||||||||||||||||||| | ||| |||||||| |||||| ||||
Sbjct: 74 gtccaaatttattatattaggatgtgtcacatccatccaaaatcccttatattataggac 15
Query: 112 tgagggagtacta 124
|||||| |||||
Sbjct: 14 ggagggaatacta 2
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatgtga 48
||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 2 tagtattccctccgtcctataatataagggattttggatggatgtga 48
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 7 ctccctccgtcccataatataagggatttt 36
|||||||||||| |||||||||||||||||
Sbjct: 106 ctccctccgtcctataatataagggatttt 77
>RF00906;MIR1122;AAAA02021630.1/597-753 39946:Oryza sativa Indica
Group
Length = 157
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
|||||| |||||||||||| ||||||||| | ||| |||||||| |||||| | || |||
Sbjct: 70 agattcgttgtattaggatatgtcacatccatccaaaatcccttatattatagaacggag 11
Query: 116 ggagtacta 124
|||||||||
Sbjct: 10 ggagtacta 2
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 2 tagtactccctccgttctataatataagggattttggatggatgtga 48
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||| |||||| |||||||||||||||||||
Sbjct: 153 tactccatccgtcttataatataagggattttgg 120
>RF00906;MIR1122;CR855038.1/146938-146783 4530:Oryza sativa (rice)
Length = 156
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 4 gtactccctccatcccataatataagggattttggagggatgtga 48
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 152 tactccctccgtcccataatataagggatttt 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 72 gatgtgtcacatctacccataatcccttgtattatgggactgagggagtac 122
||||||||||||| ||| |||||||| |||||||||| ||||||||||
Sbjct: 54 gatgtgtcacatccctccaaaatcccttatattatgggatggagggagtac 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 123 aatcccttatattatgggacggagggagta 152
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa
Japonica Group
Length = 240
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggatttt 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 31 aatcccttatattatgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||| |||||||||| |||||||
Sbjct: 240 gtactccctccgtctcataatataaaagattttg 207
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa
Japonica Group
Length = 241
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 6 actccctccgtcccataatataagggattttg 37
||||||||||||||||||||||||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttg 34
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||||||||| ||||||||||||||||
Sbjct: 241 gtactccctccgtcccacaatataagggattttg 208
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccataatataagggatttt 209
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||| ||| |||||||||||||||
Sbjct: 1 gtactccctccgtctcatgatataagggattttg 34
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 211 aatcccttatattatgggacggagggagta 240
>RF00906;MIR1122;AAAA02014858.1/37527-37621 39946:Oryza sativa
Indica Group
Length = 95
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 gtagtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||| |||||| |||||||||||||||||| |||||||
Sbjct: 1 gtagtactccctctgtcccaaaatataagggattttggatggatgtga 48
Score = 60.0 bits (30), Expect = 7e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 71 ggatgtgtcacatctacccataatcccttgtattatgggactgagggagtacta 124
|||||||||||||| | ||| |||||||| |||| |||||| ||||||||||||
Sbjct: 55 ggatgtgtcacatccatccaaaatcccttatattttgggacagagggagtacta 2
>RF00906;MIR1122;AAAA02015040.1/10135-10264 39946:Oryza sativa
Indica Group
Length = 130
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 126 tactcccttcgtcccataatataagggattttggagggatgtga 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tcccataatataagggattttgga 39
||||||||||||||||||||||||
Sbjct: 16 tcccataatataagggattttgga 39
>RF00906;MIR1122;AAAA02012907.1/4650-4807 39946:Oryza sativa Indica
Group
Length = 158
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 55 cagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactga 114
|||||||||||| |||||||||||||||| ||||| |||| || ||||||| ||| ||
Sbjct: 88 cagattcattgtgctaggatgtgtcacatccacccaaaatcttttctattatgagacaga 147
Query: 115 gggagtac 122
||||||||
Sbjct: 148 gggagtac 155
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 51 cgtccagattcattgtattaggatgtgtcacat-ctacccataatcccttgtattatggg 109
|||||||||||||| || ||||||||||||||| | || | |||||||| ||||||||
Sbjct: 76 cgtccagattcattatactaggatgtgtcacatccaacataaaatcccttatattatgga 17
Query: 110 actgagggagtac 122
|| ||||||||||
Sbjct: 16 acggagggagtac 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggatttt 36
||||||||||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgttccataatataagggatttt 36
>RF00906;MIR1122;AP006753.2/60246-60378 39947:Oryza sativa
Japonica Group
Length = 133
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatccctt 99
||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 78 gtccagattcattgtgctaggatgtgtcacatccacccaaaatccctt 31
>RF00906;MIR1122;AP008210.1/34377663-34377533 39947:Oryza sativa
Japonica Group
Length = 131
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 127 tactcccttcgtcccataatataagggattttggagggatgtga 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctttgtcccataatataagggattttggagggatgtga 48
>RF00906;MIR1122;AC090120.8/86565-86433 4530:Oryza sativa (rice)
Length = 133
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||||||||||
Sbjct: 129 tactccctccgtcccataatataagggatttt 98
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 55 cagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactga 114
||||||||| || |||||||||||||||| | | |||||||| ||||||||||| ||
Sbjct: 63 cagattcataatactaggatgtgtcacatcccacaaaaatcccttatattatgggacgga 122
Query: 115 gggagta 121
|||||||
Sbjct: 123 gggagta 129
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggattttgg 38
|||||||| |||||| || |||||||||||||||||
Sbjct: 3 agtactccttccgtctcaaaatataagggattttgg 38
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 119 tactccctccgtcccataatataagcgattttggagcgatgtga 76
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatt 34
||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtcccataatataagggatt 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| | ||| |||| ||||||||||| ||| |||| ||| |||||||||||
Sbjct: 50 gtccagattcgtagtactaggttgtgtcacatcgctccaaaatcgcttatattatgggac 109
Query: 112 tgagggagta 121
|||||||||
Sbjct: 110 ggagggagta 119
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 89 cataatcccttgtattatgggactgagggagta 121
||||||||||| ||||||||||| |||||||||
Sbjct: 37 cataatcccttatattatgggacagagggagta 5
>RF00906;MIR1122;AP003335.4/28125-28259 39947:Oryza sativa
Japonica Group
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctctgtcccataatataagggattttggagggatgtga 48
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacagagggagta 5
>RF00906;MIR1122;AP003746.2/12557-12407 39947:Oryza sativa Japonica
Group
Length = 151
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 74 tgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 100 tgtgtcacatccacccaaaatcccttatattatgggacagagggagta 147
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||| ||||||||||||||||||||||||
Sbjct: 147 tactccctctgtcccataatataagggattttgg 114
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 74 tgtgtcacatctacccataatcccttgtattatgggactgagggagtac 122
||||||||||| |||| |||||||| ||||||||||| |||||||||
Sbjct: 52 tgtgtcacatccaccccaaatcccttatattatgggacaaagggagtac 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattt 35
||||||||| |||||||||||||||||||||
Sbjct: 4 gtactccctttgtcccataatataagggattt 35
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 63.9 bits (32), Expect = 5e-10
Identities = 99/121 (81%), Gaps = 4/121 (3%)
Strand = Plus / Plus
Query: 1 gtagtactccctccgtcccataatataagggattttggacagatgtgagacgtccagatt 60
||||||||||||||||||| ||||||||||||||||| ||| | ||||| |||
Sbjct: 1 gtagtactccctccgtccctaaatataagggattttggtcagtt----tctgtccaaatt 56
Query: 61 cattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagt 120
| ||||| |||||||||||||||| ||| |||||||| |||| ||||| ||||||||
Sbjct: 57 cgttgtactaggatgtgtcacatcacaccaaaatcccttatatttagggacggagggagt 116
Query: 121 a 121
|
Sbjct: 117 a 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 117 tactccctccgtccctaaatataagggattttgg 84
>RF00906;MIR1122;AC093953.2/44822-44955 39947:Oryza sativa Japonica
Group
Length = 134
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggac 40
|||||||||||||||| |||||||||||||||||||
Sbjct: 130 tactccctccgtcccaaaatataagggattttggac 95
>RF00906;MIR1122;AL845346.4/42836-42971 4530:Oryza sativa (rice)
Length = 136
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatg 45
||||||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcctaaaatgtaagggattttggacagatg 45
>RF00906;MIR1122;AP008208.1/4007308-4007180 39947:Oryza sativa
Japonica Group
Length = 129
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 tccctccgtcccataatataagggattttgga 39
||||||||||||||||||||||||||||||||
Sbjct: 8 tccctccgtcccataatataagggattttgga 39
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 ccctccgtcccataatataagggatttt 36
||||||||||||||||||||| ||||||
Sbjct: 123 ccctccgtcccataatataagagatttt 96
>RF00906;MIR1122;AC084282.6/14827-14672 39947:Oryza sativa Japonica
Group
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 152 tactccctccgtcccatgatataagggattttggagggatgtga 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| | || ||| |||||||||||| ||| |||||||| ||| |||||||
Sbjct: 83 gtccagattcgtagttctagaatgtgtcacatccctccaaaatcccttatatcatgggac 142
Query: 112 tgagggagta 121
|||||||||
Sbjct: 143 ggagggagta 152
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgga 39
||||||||||||||||| ||||||||||||||||||
Sbjct: 137 gtactccctccgtcccaaaatataagggattttgga 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagtac 122
||||||||||| |||| | ||| |||||||| |||| |||||| ||||||||||
Sbjct: 84 taggatgtgtcccatccatccaaaatcccttatattttgggacggagggagtac 137
>RF00906;MIR1122;EF577863.1/736-830 4532:Oryza australiensis
Length = 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtg 47
|||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 91 tactccctccatcccaaaatataagggattttggtcagatgtg 49
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccatcccaatatataagggattttgg 38
>RF00906;MIR1122;AAAA02000785.1/4986-5079 39946:Oryza sativa
Indica Group
Length = 94
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtcctataatataagggattttgg 38
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||| |||||||||||||| ||||||||
Sbjct: 90 tactccctctctcccataatataagagattttgg 57
>RF00906;MIR1122;AACV01006039.1/12119-12209 39947:Oryza sativa
Japonica Group
Length = 91
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattt 35
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggat 33
||||||||||||||||| ||||||||||||
Sbjct: 88 gtactccctccgtcccacaatataagggat 59
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacggagggagta 5
>RF00906;MIR1122;AAAA02007746.1/10226-10342 39946:Oryza sativa
Indica Group
Length = 117
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatgtga 48
|||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 116 tagtactctgtccgtcccaaaatataagggattttggacggatgtga 70
>RF00906;MIR1122;AACV01015246.1/27552-27707 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||||||||||||||||||||||||||||
Sbjct: 152 tactccctccgtcccataatataagggattt 122
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgga 39
|||||||||| |||||||| ||||||||||| ||||
Sbjct: 4 gtactccctctgtcccatagtataagggattctgga 39
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 123 aatcccttatattatgggacggagggagta 152
>RF00906;MIR1122;AAAA02015085.1/16920-17040 39946:Oryza sativa
Indica Group
Length = 121
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggatttt 36
|||||||||||||||||||||||||||| ||||||
Sbjct: 2 tagtactccctccgtcccataatataagtgatttt 36
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||| |||| |||||||||||||||||||||
Sbjct: 117 tactctctccatcccataatataagggatttt 86
>RF00906;MIR1122;AC105731.2/34053-33963 39947:Oryza sativa
Japonica Group
Length = 91
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggattt 35
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattt 35
||||||||||||||||| ||||||||||||||
Sbjct: 88 gtactccctccgtcccacaatataagggattt 57
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacggagggagta 5
>RF00906;MIR1122;AAAA02014561.1/46160-46023 39946:Oryza sativa
Indica Group
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||| ||||||||| |||||||||| |||||||
Sbjct: 137 tagtactccctccgtcctataatataacggattttggagggatgtga 91
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||| |||||||||| ||||||
Sbjct: 5 tactccctccgtccgataatataagagatttt 36
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| ||||| ||| |||||||||||| | ||| |||||||| |||| |||||
Sbjct: 84 gtccagattcgttgtactagaatgtgtcacatccaaccaaaatcccttatatttagggac 143
Query: 112 tgagggagtac 122
||||||||||
Sbjct: 144 agagggagtac 154
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||| ||||| |||||||||||||||||
Sbjct: 154 gtactccctctgtccctaaatataagggattttgg 120
>RF00906;MIR1122;AP008213.1/3607812-3607697 39947:Oryza sativa
Japonica Group
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||| ||||||||||||||||||
Sbjct: 112 tactccctccgtcccaaaatataagggattttgga 78
>RF00906;MIR1122;AAAA02020252.1/431-548 39946:Oryza sativa Indica
Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
||||||||||||||||||||||||| |||||||||
Sbjct: 114 tactccctccgtcccataatataagcgattttgga 80
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatt 34
||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtcccataatataagggatt 34
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 89 cataatcccttgtattatgggactgagggagta 121
||||||||||| ||||||||||| |||||||||
Sbjct: 37 cataatcccttatattatgggacagagggagta 5
>RF00906;MIR1122;AAAA02003361.1/12742-12901 39946:Oryza sativa
Indica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||| ||||||||||||||||||||||||
Sbjct: 156 tactccctccatcccataatataagggattttgga 122
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 4 gtactccctccgtcccataatataagaaattttggagggatgtga 48
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 69 taggatgtgtcacatctacccataatcccttgtattatgggactgagggagtac 122
|||||||||||||||| ||| ||| ||| ||||||||||| ||||||||||
Sbjct: 57 taggatgtgtcacatccctccaaaatttcttatattatgggacggagggagtac 4
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||| || |||||||||||||||||| ||| |||||||| |||| ||||
Sbjct: 84 gtccagattcatcatactaggatgtgtcacatctaaccaaaatcccttatatttagggat 143
Query: 112 tgagggagtac 122
||||||||||
Sbjct: 144 ggagggagtac 154
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccctaaatataagggattttgg 38
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 154 gtactccctccatccctaaatataagggattttggttagatgtga 110
>RF00906;MIR1122;AL512546.2/55731-55825 4530:Oryza sativa (rice)
Length = 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1 gtagtactccctccgtcccataatataagggattttgga 39
||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1 gtagtactccctctgtcccaaaatataagggattttgga 39
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 71 ggatgtgtcacatctacccataatcccttgtattatgggactgagggagtacta 124
|||||||| ||||| | ||| |||||||| |||| |||||| ||||||||||||
Sbjct: 55 ggatgtgttacatccatccaaaatcccttatattttgggacagagggagtacta 2
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||||| ||||||||||||||||||||
Sbjct: 1 gtactccctccgttccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||| ||||||||||||||||||||||||
Sbjct: 235 tactccctacgtcccataatataagggattttg 203
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa
Indica Group
Length = 235
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||||| |||||||||||||||||
Sbjct: 1 gtactccctccgtcccctaatataagggattttg 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagg 30
||||||||||||||||||||||||||
Sbjct: 234 tactccctccgtcccataatataagg 209
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||| ||||||||||||||||||||||
Sbjct: 1 gtactccctccatcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||| ||||||||
Sbjct: 238 tactccctccgtcccataatataaaggattttg 206
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa
Japonica Group
Length = 240
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||||| |||||||||||||||||
Sbjct: 1 gtactccctccgtcccctaatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||| ||||||||||||||||||||||||||||
Sbjct: 239 tacttcctccgtcccataatataagggattttg 207
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||| |||||||||
Sbjct: 1 gtactccctccgtcccataatataggggattttg 34
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||| ||||||||||||||||||||||||||
Sbjct: 1 gtactccttccgtcccataatataagggattttg 34
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||| ||||||||||||||||||||||
Sbjct: 241 gtactccctccatcccataatataagggattttg 208
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||||| |||||||||||||||||
Sbjct: 1 gtactccctccgtcccctaatataagggattttg 34
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 38 tactccctccgtcccaaaatataagggattttgg 71
>RF00906;MIR1122;AAAA02021919.1/27572-27694 39946:Oryza sativa
Indica Group
Length = 123
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||| ||||||||||||||||||||
Sbjct: 119 tactccctccgtcacataatataagggattttgg 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggat 33
|||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccataatataaaggat 33
>RF00906;MIR1122;AAAA02009787.1/33052-32959 39946:Oryza sativa
Indica Group
Length = 94
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccatccgtcccataatataagggattttgg 38
>RF00906;MIR1122;AACV01015419.1/9967-10122 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgt 46
|||||||||| ||||||||||||||| |||||||| ||||||
Sbjct: 152 tactccctccatcccataatataaggtattttggagagatgt 111
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggatt 34
||||||||||||||||||| ||||||||||||
Sbjct: 3 agtactccctccgtcccatgatataagggatt 34
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| ||||| |||||||||||||||| ||| |||||||| |||| |||||
Sbjct: 74 gtccagattcgttgtactaggatgtgtcacatcccaccaaaatcccttatatttagggac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 ggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| ||||| |||||||||||||||| ||| |||||||| |||| |||||
Sbjct: 83 gtccagattcgttgtactaggatgtgtcacatcccaccaaaatcccttatatttagggac 142
Query: 112 tgagggagta 121
|||||||||
Sbjct: 143 ggagggagta 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccctaaatataagggattttgg 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 152 tactccctccgtccctaaatataagggattttgg 119
>RF00906;MIR1122;AACV01024996.1/33659-33776 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 64 tgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||| |||||||||||||||| ||||| |||| ||| ||||||| ||| |||||||||
Sbjct: 57 tgtaataggatgtgtcacatccacccaaaatcacttatattatgagacggagggagta 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||| ||||||||||| ||||||||
Sbjct: 114 tactccctccgtctcataatataagtgattttgg 81
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataag 29
|||||| |||||||||||||||||||
Sbjct: 4 gtactctctccgtcccataatataag 29
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
|||||| ||||| |||||||||||||||| | ||| |||||||| |||| ||||| |||
Sbjct: 46 agattcgttgtactaggatgtgtcacatccaaccaaaatcccttatatttagggacggag 105
Query: 116 ggagta 121
||||||
Sbjct: 106 ggagta 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 111 tactccctccgtccctaaatataagggattttgg 78
>RF00906;MIR1122;AAAA02020195.1/3874-3739 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccatattataagggattttgg 38
>RF00906;MIR1122;AAAA02035130.1/4826-4960 39946:Oryza sativa Indica
Group
Length = 135
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| ||||| ||| ||||||| ||||| ||| ||||||||||||| |||||
Sbjct: 62 gtccagattcgttgtactagaatgtgtcgcatctgaccaaaatcccttgtatttagggac 121
Query: 112 tgagggagta 121
|||||||||
Sbjct: 122 agagggagta 131
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| |||||||||||||| ||||||| | | | |||||||| |||| |||||
Sbjct: 74 gtccagattcgttgtattaggatgtatcacatccaactaaaatcccttatatttagggac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 ggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| |||||||||||||| ||||||| | | | |||||||| |||| ||| |
Sbjct: 78 gtccagattcgttgtattaggatgtatcacatccaactaaaatcccttatatttaggggc 137
Query: 112 tgagggagta 121
|||||||||
Sbjct: 138 ggagggagta 147
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtccctaaatataagggatttt 36
>RF00906;MIR1122;AC215820.3/114332-114188 4537:Oryza punctata
Length = 145
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagggattttgg 38
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 121 tactccctccgtcccaaaatataagggattttgg 88
>RF00906;MIR1122;AP008210.1/20744899-20745028 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttgga 39
|||||||| |||| ||||||||||||||||||||||||
Sbjct: 129 tagtactctctccatcccataatataagggattttgga 92
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| ||| |||||| ||||||||| ||||| |||| ||| |||||||||||
Sbjct: 84 gtccagattcgaagtactaggatatgtcacatccacccaaaatctcttatattatgggac 143
Query: 112 tgagggagta 121
|||||||||
Sbjct: 144 ggagggagta 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||||||||||||| ||||||||
Sbjct: 153 tactccctccgtcccataatataagagattttgg 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccatcccaaaatataagggattttgg 38
>RF00906;MIR1122;AP004737.3/86167-86298 39947:Oryza sativa Japonica
Group
Length = 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 100/124 (80%), Gaps = 7/124 (5%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga-------gacgtccag 57
|||||| | |||||||||||||||||||||||||| |||||| | ||| ||
Sbjct: 5 tactcctttcgtcccataatataagggattttggatgaatgtgacatatcctatgtctag 64
Query: 58 attcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgaggg 117
|||||||| | |||||||||| | ||| ||||| |||||||| |||||| |||| |||||
Sbjct: 65 attcattgcactaggatgtgttatatccacccaaaatcccttatattataggacggaggg 124
Query: 118 agta 121
||||
Sbjct: 125 agta 128
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||| |||||||||||||||||||
Sbjct: 128 tactccctccgtcctataatataagggattttgg 95
>RF00906;MIR1122;AAAA02025804.1/26432-26560 39946:Oryza sativa
Indica Group
Length = 129
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgt 46
|||||||||| ||||||||| |||||||||||||| ||||||
Sbjct: 125 tactccctccatcccataatttaagggattttggagagatgt 84
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtcccataatataaggaattttgg 38
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||| |||||||||||||||||||||||
Sbjct: 112 tactccctccatcccataatataagggattttgg 79
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 153 tactccctccgtcccaaaatataagggattttgg 120
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1 gtagtactccctccgtcccataatataagggattttgg 38
||||||||||||||||||| |||||||||||||||||
Sbjct: 131 gtagtactccctccgtccctaaatataagggattttgg 94
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||| || |||||||||||||||| || || |||| ||| |||| ||||||
Sbjct: 51 gtccagattcatagtcttaggatgtgtcacatgcacacaaaatctcttatattttgggac 110
Query: 112 tgagggagta 121
|||||||||
Sbjct: 111 ggagggagta 120
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| |||||||| |||||||
Sbjct: 120 tactccctccgtcccaaaatataagagattttg 88
>RF00906;MIR1122;AAAA02000541.1/33642-33511 39946:Oryza sativa
Indica Group
Length = 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||||| | || ||||| ||||||||||||| | || ||| |||||| ||||
Sbjct: 74 gtccagattcattgaactaagatgtatcacatctacccaaactctcttatattataggac 15
Query: 112 tgagggagta 121
|||||||||
Sbjct: 14 agagggagta 5
>RF00906;MIR1122;AC078829.10/4988-5143 39947:Oryza sativa Japonica
Group
Length = 156
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||||||||||||||||
Sbjct: 152 tactccctccgtcccaaaatataagggattttgg 119
>RF00906;MIR1122;AACV01004468.1/36611-36456 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
||||||||| |||||| |||||||||||||||| | ||| |||||||| |||| ||| |
Sbjct: 83 gtccagatttattgtactaggatgtgtcacatccaaccaaaatcccttatatttaggggc 142
Query: 112 tgagggagta 121
|||||||||
Sbjct: 143 ggagggagta 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||| ||| |||||||||||||||||
Sbjct: 152 tactccctccgcccctaaatataagggattttgg 119
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||| |||||||||||||||||||
Sbjct: 2 tactccctccgtctcataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||| ||||||||||||||||||
Sbjct: 235 tactccctccgtcctataatataagggattttg 203
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa
Indica Group
Length = 242
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||| |||||||||||||||||||
Sbjct: 2 tactccctccgtctcataatataagggattttg 34
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||||| |||||| ||||||||
Sbjct: 241 tactccctccgtcccacaatataggggatttt 210
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||| |||||||||||||||||||||||||
Sbjct: 239 tactccccccgtcccataatataagggattttg 207
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||| |||||||||||||||||||||||||
Sbjct: 2 tactccccccgtcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggatttt 36
||||||||||||||||| |||||||||||||||
Sbjct: 243 gtactccctccgtcccacaatataagggatttt 211
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||| |||||||||||||||||||||||||||
Sbjct: 2 tactctctccgtcccataatataagggattttg 34
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggatttt 36
|||||| |||||||| |||||||||||||||||
Sbjct: 242 gtactctctccgtcctataatataagggatttt 210
>RF01058;MIR806;AL772417.3/14129-13890 4530:Oryza sativa (rice)
Length = 240
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||| |||||||||||||||||
Sbjct: 239 tactccctccgtcccttaatataagggattttg 207
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||||| || ||||||||||||||
Sbjct: 1 gtactccctccgtcccctagtataagggattttg 34
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||||||||| ||||||||
Sbjct: 234 tactccctccgtcccataatataacggattttg 202
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataag 29
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataag 26
>RF01058;MIR806;AP005719.3/82355-82591 39947:Oryza sativa Japonica
Group
Length = 237
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||| |||||||||||||||||
Sbjct: 2 tactccctccgtcccctaatataagggattttg 34
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||| |||| |||||||||||||||||
Sbjct: 236 tactccctccatcccctaatataagggattttg 204
>RF01058;MIR806;AACV01010328.1/26487-26725 39947:Oryza sativa
Japonica Group
Length = 239
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||| |||||||||||||||||||
Sbjct: 238 tactccctccgtctcataatataagggattttg 206
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatt 34
|||||||||| |||||||||||||||||||
Sbjct: 2 tactccctccatcccataatataagggatt 31
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| ||||||||||||||||
Sbjct: 2 tactccctccgtcccagaatataagggattttg 34
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||||| |||||||||||||||
Sbjct: 240 tactccctccgtcccacaatataagggatttt 209
>RF01058;MIR806;AP004672.3/59439-59196 39947:Oryza sativa Japonica
Group
Length = 244
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||| |||||||||||||||||
Sbjct: 2 tactccctccgtcccctaatataagggattttg 34
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||| ||||| |||||||||||
Sbjct: 243 tactccctccgtcccctaatacaagggattttg 211
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||||||||| ||||| |||||||||
Sbjct: 214 aatcccttgtattaggggacggagggagta 243
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||| |||||||||||||||||||||||||||
Sbjct: 2 tactctctccgtcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggatttt 36
||||||||||||||||| |||||||||||||||
Sbjct: 244 gtactccctccgtcccacaatataagggatttt 212
>RF01058;MIR806;AACV01026200.1/8692-8927 39947:Oryza sativa
Japonica Group
Length = 236
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||||||||||| |||||||||
Sbjct: 2 tactccctccgtcccataatatatgggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||| ||||||||||||||||||||||||||
Sbjct: 235 tactccatccgtcccataatataagggattttg 203
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| ||||||||||||||||
Sbjct: 241 tactccctccgtcccaaaatataagggattttg 209
Score = 50.1 bits (25), Expect = 7e-06
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||| |||||||||||||||||||||||
Sbjct: 2 tactccctc-gtcccataatataagggattttg 33
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||| ||||||||||||||||||||||
Sbjct: 2 tactccctccatcccataatataagggattttg 34
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| ||||||||||||||||
Sbjct: 240 tactccctccgtcccacaatataagggattttg 208
>RF01058;MIR806;AAAA02007190.1/17283-17525 39946:Oryza sativa
Indica Group
Length = 243
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||||| |||||||||||||||||
Sbjct: 2 tactccctccgtcccttaatataagggattttg 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||| ||||| |||||||||||||||||
Sbjct: 243 gtactccctcggtcccctaatataagggattttg 210
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||| ||||||||||||||||||||||||||
Sbjct: 242 tactccatccgtcccataatataagggattttg 210
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tccgtcccataatataagggattttg 37
||||||||||||||||||||||||||
Sbjct: 9 tccgtcccataatataagggattttg 34
>RF00906;MIR1122;AAAA02019805.1/1437-1583 39946:Oryza sativa
Indica Group
Length = 147
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatg 45
|||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 5 tactccatccgttccaaaatataagggattttggacagatg 45
>RF00906;MIR1122;AAAA02003711.1/12163-12287 39946:Oryza sativa
Indica Group
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggat 33
|||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagggat 33
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 8 tccctccgtcccataatataagggattttg 37
||||||| ||||||||||||||||||||||
Sbjct: 118 tccctccatcccataatataagggattttg 89
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggatttt 36
||||||||||||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaatataagggatttt 36
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||| ||||||| ||||||||||||||||
Sbjct: 153 tactccctccatcccatagtataagggattttgga 119
>RF00906;MIR1122;AP008211.1/27787781-27787901 39947:Oryza sativa
Japonica Group
Length = 121
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatg 45
||||||||||| |||| ||||||||||||||||||| ||||
Sbjct: 117 tactccctccgccccaaaatataagggattttggacggatg 77
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 9 ccctccgtcccataatataagggattttggac 40
||||| |||||| |||||||||||||||||||
Sbjct: 9 ccctctgtcccaaaatataagggattttggac 40
>RF00906;MIR1122;AAAA02031678.1/2806-2923 39946:Oryza sativa Indica
Group
Length = 118
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 57 gattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgagg 116
|||||||| || |||||||||||||||| ||||| |||| ||| || |||||||| || |
Sbjct: 50 gattcattctactaggatgtgtcacatccacccaaaatctcttatactatgggacggatg 109
Query: 117 gagta 121
|||||
Sbjct: 110 gagta 114
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||| ||||||||||| |||||| ||||||||
Sbjct: 114 tactccatccgtcccatagtataagagattttgg 81
>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa Indica
Group
Length = 122
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||||| ||||||||||||||
Sbjct: 118 tactccctccgtcccatattataagggattttg 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 73 atgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||| || || |||||||| || |||||||| |||||||||
Sbjct: 70 atgtgtcacatccactcaaaatcccttataatatgggacggagggagta 118
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa Indica
Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| ||||||||||||||||
Sbjct: 130 tactccctccgtcccacaatataagggattttg 98
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtctcataatataagtgattttg 37
>RF00906;MIR1122;AC079888.10/111519-111651 39947:Oryza sativa
Japonica Group
Length = 133
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatg 45
|||||||||||| ||| ||||||| ||||||||||||||||
Sbjct: 129 tactccctccgttccaaaatataaaggattttggacagatg 89
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttgg 38
|||||||||||||||||| |||||||||||||||||
Sbjct: 2 tagtactccctccgtcccgaaatataagggattttgg 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||||||||||||| ||||||| ||||| ||||
Sbjct: 91 tactccctccgtcccaaaatataaaggattatgga 57
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 79 cacatctacccataatcccttgtattatgggactgagggagtacta 124
|||||| ||||| |||||||| |||| ||||| ||||||||||||
Sbjct: 47 cacatccacccaaaatcccttatatttcgggacggagggagtacta 2
>RF00906;MIR1122;AACV01022590.1/16657-16788 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||| ||||||||||||||| ||||||||| | ||||||
Sbjct: 4 gtactccctctgtcccataatataagtgattttggagatatgtga 48
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||||| || |||||||||||||||||||||||||
Sbjct: 128 tactccatcagtcccataatataagggattttgga 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| |||||||||||||| ||||||
Sbjct: 99 aatcccttatattatgggactgatggagta 128
>RF00906;MIR1122;CR855052.1/5895-5769 4530:Oryza sativa (rice)
Length = 127
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttggacagatgtga 48
||||||| |||||||||||||||||||||||| ||| |||||||
Sbjct: 4 gtactccttccgtcccataatataagggatttaggagggatgtga 48
>RF00906;MIR1122;AACV01009020.1/3379-3256 39947:Oryza sativa
Japonica Group
Length = 124
Score = 58.0 bits (29), Expect = 3e-08
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagacgtccagattcatt 64
|||||||||||||| | ||||||||||||||||| ||||| || |||| ||||| |
Sbjct: 120 tactccctccgtcctaaaatataagggattttggttagatgagatctgtcctgattcgta 61
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgaggg 117
|||| ||||||||| |||| | ||| |||||||| |||| ||||| |||||
Sbjct: 60 ctattcggatgtgtcccatccaaccaaaatcccttatatttcgggacggaggg 8
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 ccctccgtcccataatataagggattttgg 38
||||||||||| |||||||||||||||||
Sbjct: 8 ccctccgtcccgaaatataagggattttgg 37
>RF00906;MIR1122;AP004123.3/86345-86268 39947:Oryza sativa
Japonica Group
Length = 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttggac 40
|||||||||||||||||||||||||| |||||||||
Sbjct: 75 gtactccctccgtcccataatataagttattttggac 39
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggatttt 36
|||||||||||||||||||||||||| ||||||
Sbjct: 154 gtactccctccgtcccataatataagagatttt 122
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||| || |||||||||||||||||| | ||||||||
Sbjct: 5 tactccctccatcttataatataagggattttgcagagatgtga 48
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||| |||||||||||||||||||
Sbjct: 2 tactccctccgttccataatataagggatttt 33
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 7 ctccctccgtcccataatataagggatttt 36
|||||||||| |||||||||||||||||||
Sbjct: 240 ctccctccgttccataatataagggatttt 211
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||| ||||||
Sbjct: 135 tactccctccgtcccataatataagagatttt 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||| ||| ||||||||||||||||||||||
Sbjct: 5 tactctctctgtcccataatataagggatttt 36
>RF00906;MIR1122;AP002482.1/27584-27452 39947:Oryza sativa Japonica
Group
Length = 133
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 129 tactccctccgtcctataatataaggggttttggatggatgtga 86
>RF00906;MIR1122;AAAA02021990.1/33218-33084 39946:Oryza sativa
Indica Group
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtcccataatataagcgatttt 36
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||| |||||||||||||||||
Sbjct: 131 tactccctccgtccaataatataagggatttt 100
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtccctaaatataagggattttggttagatgtga 48
>RF00906;MIR1122;AAAA02011838.1/7711-7833 39946:Oryza sativa Indica
Group
Length = 123
Score = 56.0 bits (28), Expect = 1e-07
Identities = 87/103 (84%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtgagac-gtccagattcat 63
||||||||||| | ||||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 119 tactccctccgccttataatataagggattttgggtggatgtgactctgtccagattcat 60
Query: 64 tgtattaggatgtgtcacatctacccataatcccttgtattat 106
|||| ||| | ||||||||| ||||| |||||||| ||||||
Sbjct: 59 tgtactag--tatgtcacatccaccca-aatcccttatattat 20
>RF00906;MIR1122;AL731617.3/71366-71211 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||| |||||||||||||||||||||||
Sbjct: 5 tactcccttcgtcccataatataagggatttt 36
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| ||||||||| ||||||
Sbjct: 152 tactccctccgtcccacaatataaggaattttg 120
>RF00906;MIR1122;AP008215.1/8288002-8287875 39947:Oryza sativa
Japonica Group
Length = 128
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||| ||||| |||||||||||||||||| |||||||
Sbjct: 124 tactccctccatcccaaaatataagggattttggagggatgtga 81
>RF00906;MIR1122;AACV01014515.1/3255-3390 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccatattataagggatttt 36
>RF00906;MIR1122;AP004885.3/67265-67119 39947:Oryza sativa Japonica
Group
Length = 147
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 143 tactccctccgtcccataatataagaaattttggagggatgtga 100
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||| || ||||||||||| ||| ||||||||| ||||||||
Sbjct: 5 tactccttctgtcccataatagaagagattttggagagatgtga 48
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 56 agattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggactgag 115
|||||||| ||| || || ||||||||||| ||| |||| ||| ||||||||||| ||
Sbjct: 70 agattcatagtactatgaagtgtcacatctctccaaaatctcttctattatgggacagaa 11
Query: 116 ggagta 121
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP005098.4/61806-61935 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 55 cagattcattgtattaggatgtgtcacatctacccataatcccttgtattatggga 110
||||||||| ||| |||||||||||||||| | ||| |||||||| |||| |||||
Sbjct: 71 cagattcatagtactaggatgtgtcacatccatccaaaatcccttatattttggga 16
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||| |||| ||||| |||||||||||||||||| |||||||
Sbjct: 5 tactctctccatcccaaaatataagggattttggatggatgtga 48
>RF00906;MIR1122;AP005912.3/116369-116237 39947:Oryza sativa
Japonica Group
Length = 133
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 70 aggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
||||| ||||||||| ||||| |||||||| || ||| ||||||||||||||
Sbjct: 56 aggatatgtcacatccacccaaaatcccttataatataggactgagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||| |||| |||||||||||||||
Sbjct: 129 tactccctccgtctcatattataagggattttgg 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||| |||| ||| |||||||||||||||
Sbjct: 5 tactccctcagtcctatattataagggattttgg 38
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa Japonica
Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||||||||||| | |||||||||| |||||||
Sbjct: 130 tactccctccgtcccataatattaaggattttggagggatgtga 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||| | ||| |||||||||||||||| ||| ||||| | |||||||||||
Sbjct: 61 gtccagattcgtagtactaggatgtgtcacatccctccaaaatccttaatattatgggac 120
Query: 112 tgagggagta 121
|||||||||
Sbjct: 121 ggagggagta 130
>RF00906;MIR1122;AAAA02018547.1/31962-31829 39946:Oryza sativa
Indica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccataatataagggatttt 36
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 92 aatcccttgtattatgggactgagggagta 121
|||||||| ||||||||||| |||||||||
Sbjct: 34 aatcccttatattatgggacagagggagta 5
>RF00906;MIR1122;AAAA02010702.1/418-543 39946:Oryza sativa Indica
Group
Length = 126
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataagggattttgg 38
|||||||||| ||||| |||||||||||||||||||
Sbjct: 3 agtactcccttcgtcctataatataagggattttgg 38
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||| ||||||||| |||||||||||||||||||
Sbjct: 122 tactacctccgtcctataatataagggattttgg 89
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 52 gtccagattcattgtattaggatgtgtcacatctacccataatcccttgtattatgggac 111
|||||||||||||||| || || || || ||| ||||| |||||||| |||||| ||||
Sbjct: 74 gtccagattcattgtactataatatgccatatccacccaaaatcccttatattataggac 15
Query: 112 tgagggagtact 123
||||||||||
Sbjct: 14 gaagggagtact 3
>RF00906;MIR1122;AP004348.4/54604-54470 39947:Oryza sativa Japonica
Group
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||| |||||||||||||||||
Sbjct: 131 tactccctccgtccaataatataagggatttt 100
>RF00906;MIR1122;AACV01012472.1/10900-10769 39947:Oryza sativa
Japonica Group
Length = 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||||| ||||||||||| |||||| |||||||
Sbjct: 128 tactccctccgtcccaaaatataagggactttggagggatgtga 85
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 gtagtactccctccgtcccataatataagggattttgga 39
||||||||||||||||||| ||||| | |||||||||||
Sbjct: 1 gtagtactccctccgtcccgtaatacaggggattttgga 39
>RF00906;MIR1122;AC084282.6/35274-35430 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 5 tactccctctgtcctataatataagggattttggagggatgtga 48
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||| |||||||||||||| ||||||||| |||||||
Sbjct: 153 tactccctccatcccataatataagcgattttggagggatgtga 110
>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
Length = 157
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 153 tactccctccgtcccaaaatataaggaattttggagggatgtga 110
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa Japonica
Group
Length = 119
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||||||||||||||||||||||| ||||||
Sbjct: 115 tactccctccgtcccataatataagagatttt 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
||||| ||| ||||||||||||||||||||||
Sbjct: 5 tactctctctgtcccataatataagggatttt 36
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttggacagatgtga 48
||||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 5 tactccctccgtccctaaatataagggattttggtcggatgtga 48
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 128 tactccctccgtccctaaatataagggattttgg 95
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
|||||||||| |||||||||||||||||||||||
Sbjct: 238 gtactccctctttcccataatataagggattttgg 204
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
||||||||| |||||| ||||||||||||||||
Sbjct: 2 tactccctctgtcccacaatataagggattttg 34
>RF00906;MIR1122;AJ234502.1/104-174 4513:Hordeum vulgare
Length = 71
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataag 29
|||||||||||||||||||||||||||
Sbjct: 69 agtactccctccgtcccataatataag 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatat 26
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatat 26
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataa 28
|||||||||||||||||||||||||||
Sbjct: 92 tagtactccctccgtcccataatataa 66
>RF00906;MIR1122;ABRL01001248.1/28987-28884 65489:Oryza barthii
Length = 104
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
||||||||||||| ||||| |||||||||||||||
Sbjct: 4 gtactccctccgttccatattataagggattttgg 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 5 tactccctccgtc-ccataatataagggattttgg 38
||||||||||||| ||||| |||||||||||||||
Sbjct: 100 tactccctccgtctccatattataagggattttgg 66
>RF00906;MIR1122;AP008210.1/27089317-27089424 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 53 tccagattcattgtattaggatgtgtcacatctacccataatccctt 99
|||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 58 tccagattcattgtgctaggatgtggcacatccacccaaaatccctt 104
>RF00906;MIR1122;AP008208.1/30008764-30008885 39947:Oryza sativa
Japonica Group
Length = 122
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataag 29
|||||||||||||||||||||||||||
Sbjct: 120 agtactccctccgtcccataatataag 94
>RF00906;MIR1122;AC068950.11/1098-1027 39947:Oryza sativa Japonica
Group
Length = 72
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||| ||||||||||| ||||||||||||||||||
Sbjct: 68 tactacctccgtcccaaaatataagggattttgga 34
>RF00906;MIR1122;CR855202.1/27481-27587 4530:Oryza sativa (rice)
Length = 107
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 53 tccagattcattgtattaggatgtgtcacatctacccataatccctt 99
|||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 51 tccagattcattgtgctaggatgtggcacatccacccaaaatccctt 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 53 tccagattcattgtattaggatgtgtcacatctacccataatccctt 99
|||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 57 tccagattcattgtgctaggatgtggcacatccacccaaaatccctt 103
>RF00906;MIR1122;AAAA02015546.1/48937-48798 39946:Oryza sativa
Indica Group
Length = 140
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcctataatataagggattt 35
Score = 50.1 bits (25), Expect = 7e-06
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 62 attgtattaggatgtgtcacat-ctacccataatcccttgtattatgggactgagggagt 120
||||| |||||||||||||||| || |||| |||||||| |||||| |||| ||||||||
Sbjct: 64 attgtcttaggatgtgtcacatacttccca-aatcccttatattataggacggagggagt 6
Query: 121 a 121
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP005612.3/100916-100800 39947:Oryza sativa
Japonica Group
Length = 117
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
||||||| |||||||||||||||||| ||||||||
Sbjct: 114 gtactccttccgtcccataatataagagattttgg 80
>RF00906;MIR1122;AAAA02007279.1/3361-3494 39946:Oryza sativa Indica
Group
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataag 29
|||||||||||||||||||||||||||
Sbjct: 132 agtactccctccgtcccataatataag 106
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa
Indica Group
Length = 147
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatataagggattt 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataa-tataagggattt 35
||||||||||||||||||| || ||||||||||||
Sbjct: 146 tagtactccctccgtcccaaaagtataagggattt 112
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa Japonica
Group
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||| ||||||||||| ||||||||||||||||||
Sbjct: 152 tacttcctccgtcccaaaatataagggattttgga 118
Score = 50.1 bits (25), Expect = 7e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 65 gtattaggatgtgtcacatctacccataatcccttgtattatgggactgagggagta 121
|||||||||||||||| ||| | ||| |||||||| |||| |||||| |||| ||||
Sbjct: 96 gtattaggatgtgtcatatccatccaaaatcccttatattttgggacggaggaagta 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggatttt 36
|||||||||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaatatatgggatttt 36
>RF00906;MIR1122;AP003932.3/98160-98287 39947:Oryza sativa Japonica
Group
Length = 128
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
||||||||| |||||||| ||||||||||||||||
Sbjct: 124 tactccctctgtcccatagtataagggattttgga 90
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 gtccagattcattgtattaggatgtgtcacatcta 86
|||||||||| ||||| ||||||||||||||||||
Sbjct: 59 gtccagattcgttgtaataggatgtgtcacatcta 93
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattt 35
|||||||||||||||| ||||||||||||||
Sbjct: 143 tactccctccgtcccaaaatataagggattt 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataa-tataagggattt 35
||||||||||||||||||| || ||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaagtataagggattt 36
>RF00906;MIR1122;AP008207.1/1012082-1012198 39947:Oryza sativa
Japonica Group
Length = 117
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 3 agtactccctccgtcccataatataag 29
|||||||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccataatataag 29
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataag 29
|||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataag 89
>RF00906;MIR1122;AAAA02006934.1/24563-24655 39946:Oryza sativa
Indica Group
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 8 tccctccgtcccataatataagggattttggacagatgt 46
||||||||||||| |||||||| |||||||||| |||||
Sbjct: 8 tccctccgtcccaaaatataagagattttggacggatgt 46
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttgga 39
|||||||| ||||||| |||||||||||| ||||||
Sbjct: 90 gtactcccaccgtcccttaatataagggaatttgga 55
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttgg 38
||||| ||||||||||| |||||||||||||||||
Sbjct: 4 gtacttcctccgtcccaaaatataagggattttgg 38
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||| ||| ||||||||||||||||
Sbjct: 91 tactccctccgttccaaaatataagggattttg 59
>RF00906;MIR1122;AACV01006155.1/18074-18163 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgga 39
|||| ||||||||||||||||||||| ||||||||
Sbjct: 86 tactacctccgtcccataatataaggcattttgga 52
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttgg 38
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 2 tagtactcactccgtcctataatataagggactttgg 38
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa Indica
Group
Length = 243
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||||||||| |||| |||||||||||
Sbjct: 243 gtactccctccgtcccacaatacaagggattttg 210
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||||||||||| |||||||| |||||||
Sbjct: 2 tactccctccgtcccacaatataagagattttg 34
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 aatcccttgtattatgggactgagggagtac 122
||||||||||||| |||||| ||||||||||
Sbjct: 213 aatcccttgtattgtgggacggagggagtac 243
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataata-taagggattttg 37
||||||||||||||||||||| ||||||||||||
Sbjct: 2 tactccctccgtcccataatattaagggattttg 35
>RF01058;MIR806;AACV01004826.1/22071-22312 39947:Oryza sativa
Japonica Group
Length = 242
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataagggattttg 37
||||||||||| |||| |||||||||||||||||
Sbjct: 242 gtactccctccatcccctaatataagggattttg 209
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttg 37
|||||||| |||||| |||||||||||||||||
Sbjct: 2 tactcccttcgtcccctaatataagggattttg 34
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 4 gtactccctccgtcccataatataagggattttg 37
|||||||||||||| ||||||||||||||||||
Sbjct: 1 gtactccctccgtctaataatataagggattttg 34
>RF00906;MIR1122;CT009735.1/55205-55297 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataag 29
||||||||||||||||||||||||||
Sbjct: 90 gtactccctccgtcccataatataag 65
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tccctccgtcccataatataag 29
||||||||||||||||||||||
Sbjct: 8 tccctccgtcccataatataag 29
>RF00906;MIR1122;DQ871219.1/56040-55948 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 4 gtactccctccgtcccataatataag 29
||||||||||||||||||||||||||
Sbjct: 90 gtactccctccgtcccataatataag 65
>RF00906;MIR1122;AAAA02018804.1/15100-15261 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||| ||||||||| |||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaatataagggattttgg 38
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatataagggattttgg 38
||||||||||||||||| | |||||||| ||||||||
Sbjct: 161 tagtactccctccgtcctaaaatataagagattttgg 125
>RF00906;MIR1122;CR855030.1/34146-34260 4530:Oryza sativa (rice)
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 ctccgtcccataatataagggattttggacagatgtga 48
|||||| |||||||||||||||||||||| |||||||
Sbjct: 7 ctccgttccataatataagggattttggagggatgtga 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 3 agtactccctccgtcccataatataagggattttggacagatgtga 48
|||||||||||||||| |||||||||| ||||||||| |||||||
Sbjct: 113 agtactccctccgtcc-ataatataagagattttggagggatgtga 69
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccctaaatataagggattttgg 38
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatata 27
||||||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccataatata 27
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 5 tactccctccgtcccataatataagggattttgg 38
||||||||||||||| |||||||||||||||||
Sbjct: 152 tactccctccgtccctaaatataagggattttgg 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccttaaatataagggattttgg 38
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tactccctccgtcccataatataagggattttgg 38
|||||||||||||||| |||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaaatagaagggattttgg 38
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 ccagattcattgtattaggatgtgtcacat 83
|||||||||||||| |||||| ||||||||
Sbjct: 68 ccagattcattgtactaggatatgtcacat 97
>RF00906;MIR1122;AACV01013196.1/2181-2029 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 2 tagtactccctccgtcccataatata 27
||||||||||||||||||||||||||
Sbjct: 152 tagtactccctccgtcccataatata 127
>RF00906;MIR1122;AP002538.2/66452-66609 39947:Oryza sativa
Japonica Group
Length = 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 tagtactccctccgtcccataatataagggattttgga 39
|||||||||||||||||| |||||||||||||||||
Sbjct: 2 tagtactccctccgtccccagatataagggattttgga 39
