miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 63.9 bits (32), Expect = 3e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 tctagtactggatgtgacatatttt-gtataatggatttggacatatgtatgtccagatt 59
||||| || |||||||||||||| | ||| ||| ||||||| |||| ||||||||||||
Sbjct: 31 tctaggaccggatgtgacatattctagtacgatgaatttggatatatatatgtccagatt 90
Query: 60 tgttgtattaggatgtgtcacatc 83
|| ||| ||||||||||||||||
Sbjct: 91 cgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 63.9 bits (32), Expect = 3e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacatctagt 87
|||||||||||| |||||| ||||||||||||||||||||
Sbjct: 56 tatgtccagattcgttgtaataggatgtgtcacatctagt 95
>RF00906;MIR1122;AP004314.3/140580-140716 39947:Oryza sativa
Japonica Group
Length = 137
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatcta 85
||||||||||| ||||||||||||||||||||||||
Sbjct: 75 tgtccagatttattgtattaggatgtgtcacatcta 40
>RF00906;MIR1122;CR855136.1/20944-20809 4530:Oryza sativa (rice)
Length = 136
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatctagtacatt 92
|||||||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 76 tgtccagattcgttgtattaagatgtgtcacatccagtacatt 34
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 8e-08
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 tctagtactggatgtgacatatttt-gtataatggatttggacatatgtatgtccagatt 59
|||||||| |||||||||||||| | |||||||| || |||| | | ||||||||||||
Sbjct: 32 tctagtaccggatgtgacatattctagtataatgaatctggatagagatatgtccagatt 91
Query: 60 tgttgtattaggatgtgtcacatc 83
|| || ||||||||||||||||
Sbjct: 92 cgtagtcctaggatgtgtcacatc 115
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 8e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 38 tggacatatgtatgtccagatttgttgtattaggatgtgtcacatctagtac 89
|||||| | ||||||||||||| || ||| |||||||||||||||| |||||
Sbjct: 70 tggacagaggtatgtccagattcgtagtactaggatgtgtcacatccagtac 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||| ||| ||||||||||||
Sbjct: 75 tgtccagattcgttgtactagaatgtgtcacatc 42
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 56.0 bits (28), Expect = 8e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 38 tggacatatgtatgtccagatttgttgtattaggatgtgtcacatctagtac 89
|||||||||||||||||||||| | || ||||||||||||||||| ||||
Sbjct: 70 tggacatatgtatgtccagattcataatactaggatgtgtcacatctggtac 121
>RF00906;MIR1122;AP008218.1/23548296-23548451 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 8e-08
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 38 tggacatatgtatgtccagatttgttgtattaggatgtgtcacatctagtac 89
|||||||||||||||||||||| | || ||||||||||||||||| ||||
Sbjct: 87 tggacatatgtatgtccagattcataatactaggatgtgtcacatctggtac 36
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 49 atgtccagatttgttgtattaggatgtgtcacatc 83
||||||||||| ||||||||||||||| |||||||
Sbjct: 76 atgtccagattcgttgtattaggatgtatcacatc 42
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| ||||||||||||||| |||||||
Sbjct: 77 tgtccagattcgttgtattaggatgtatcacatc 110
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 51 gtccagatttgttgtattaggatgtgtcacatcta 85
||||||||| ||||||||||||||||||||||||
Sbjct: 74 gtccagattcattgtattaggatgtgtcacatcta 40
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa Indica
Group
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatctagta 88
|||||||||| |||||| |||||||||||||||| ||||
Sbjct: 62 tgtccagattcgttgtactaggatgtgtcacatccagta 100
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
||||||||||| ||||| ||||||||||||||||
Sbjct: 82 tgtccagatttattgtactaggatgtgtcacatc 115
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||| ||||||||||||||||
Sbjct: 75 tgtccagattcgttgtactaggatgtgtcacatc 42
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||| ||||||||||||||||
Sbjct: 82 tgtccagattcgttgtactaggatgtgtcacatc 115
>RF00906;MIR1122;AAAA02022617.1/29987-30140 39946:Oryza sativa
Indica Group
Length = 154
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| | |||||||||||||||||||||
Sbjct: 80 tgtccagattcgatgtattaggatgtgtcacatc 113
>RF00906;MIR1122;AC135864.5/73183-73340 39947:Oryza sativa
Japonica Group
Length = 158
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacatcta 85
|||||||||||| || ||||||||||||||| ||||||
Sbjct: 77 tatgtccagattcgtcgtattaggatgtgtcccatcta 40
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa
Japonica Group
Length = 155
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||||||||||||||| ||||
Sbjct: 76 tgtccagattcgttgtattaggatgtgtcccatc 43
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||||||||||||||| ||||
Sbjct: 81 tgtccagattcgttgtattaggatgtgtctcatc 114
>RF00906;MIR1122;AACV01004468.1/36611-36456 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
||||||||||| ||||| ||||||||||||||||
Sbjct: 82 tgtccagatttattgtactaggatgtgtcacatc 115
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||| ||||||||||||||||
Sbjct: 43 tgtccagattcgttgtactaggatgtgtcacatc 76
>RF00906;MIR1122;AP008208.1/277556-277420 39947:Oryza sativa
Japonica Group
Length = 137
Score = 50.1 bits (25), Expect = 5e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 2 ctagtactggatgtgacatat-tttgtataatggatttggacata 45
||||||||||||||||||||| |||||| |||| || ||||||||
Sbjct: 29 ctagtactggatgtgacatatctttgtacaatgaatctggacata 73
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 5e-06
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 9 tggatgtgacatattttg-tataatggatttggacatat-gtatgtccagatttgttgta 66
||||||||||| || ||| ||||||| || |||||||| ||||||||||||| || ||
Sbjct: 40 tggatgtgacacatcttggtataatgaatctggacataccgtatgtccagattcattata 99
Query: 67 ttaggatgtgtcacatc 83
||||||||||||||||
Sbjct: 100 ctaggatgtgtcacatc 116
>RF00906;MIR1122;AACV01003164.1/19294-19158 39947:Oryza sativa
Japonica Group
Length = 137
Score = 50.1 bits (25), Expect = 5e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 2 ctagtactggatgtgacatat-tttgtataatggatttggacata 45
||||||||||||||||||||| |||||| |||| || ||||||||
Sbjct: 109 ctagtactggatgtgacatatctttgtacaatgaatctggacata 65
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 51 gtccagatttgttgtattaggatgtgtcacatc 83
||||||||| |||||| ||||||||||||||||
Sbjct: 58 gtccagattcgttgtactaggatgtgtcacatc 90
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 47 gtatgtccagatttgttgtattaggatgtgtcacatc 83
||||||||||||| | ||||||||||||||||||||
Sbjct: 35 gtatgtccagattcatcgtattaggatgtgtcacatc 71
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatctagtaca 90
|||||||||| |||||| ||||||||||| |||| ||||||
Sbjct: 75 tgtccagattcgttgtactaggatgtgtcccatccagtaca 35
>RF00906;MIR1122;AACV01011066.1/35622-35733 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacatc 83
|||||||| |||| || |||||||||||||||||||
Sbjct: 77 tatgtccaaatttattatattaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||||| |||||| ||| ||||||||||||
Sbjct: 81 tatgtccagattcgttgtactagaatgtgtcacatc 116
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 tctagtactggatgtgacatatttt-gtataatggatttggacatatgtatgtccagatt 59
||||| || |||| ||||||||| | ||||||| || |||||| |||||||||||||||
Sbjct: 31 tctagaacgggatttgacatattctagtataataaatctggacaaatgtatgtccagatt 90
Query: 60 tgttgtattaggatgtgtcacatc 83
| ||| ||| ||||||||||||
Sbjct: 91 catagtactagaatgtgtcacatc 114
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||||| ||||| ||||||||||||||||
Sbjct: 68 tatgtccagattcattgtactaggatgtgtcacatc 103
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||||| || ||| ||||||||||||||||
Sbjct: 66 tatgtccagattcgtagtaataggatgtgtcacatc 101
>RF00906;MIR1122;AAAA02018504.1/8341-8217 39946:Oryza sativa
Indica Group
Length = 125
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 gtccagatttgttgtattaggatgtgtcacatcta 85
||||||||| |||||||||||||||||| |||||
Sbjct: 52 gtccagattcattgtattaggatgtgtcatatcta 86
>RF00906;MIR1122;AAAA02031042.1/16213-16344 39946:Oryza sativa
Indica Group
Length = 132
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacat 82
|||||| |||||| ||||| |||||||||||||||
Sbjct: 77 tatgtctagatttattgtactaggatgtgtcacat 43
>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
Indica Group
Length = 165
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 52 tccagatttgttgtattaggatgtgtcacat 82
|||||||| |||||||||||||||||||||
Sbjct: 81 tccagattcattgtattaggatgtgtcacat 51
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatct 84
||||||||||||||||| |||||||| | ||||||
Sbjct: 75 tgtccagatttgttgtactaggatgtattacatct 41
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatctagta 88
|||| ||||| |||||||||||||||||| |||| ||||
Sbjct: 75 tgtctagattcgttgtattaggatgtgtcccatccagta 37
>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa Japonica
Group
Length = 165
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 52 tccagatttgttgtattaggatgtgtcacat 82
|||||||| |||||||||||||||||||||
Sbjct: 85 tccagattcattgtattaggatgtgtcacat 115
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 41 acatatgtatgtccagatttgttgtattaggatgtgtcacatc 83
||||||| ||||| ||||| ||| || ||||||||||||||||
Sbjct: 72 acatatgcatgtctagattcgttttactaggatgtgtcacatc 114
>RF00906;MIR1122;AC138001.2/59407-59266 39947:Oryza sativa
Japonica Group
Length = 142
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tctagtactggatgtgacatatt 23
|||||||||||||||||||||||
Sbjct: 33 tctagtactggatgtgacatatt 55
>RF00906;MIR1122;ABRL01000294.1/23842-24000 65489:Oryza barthii
Length = 159
Score = 44.1 bits (22), Expect = 3e-04
Identities = 74/90 (82%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tctagtactggatgtgacatatt-ttgtataatggatttggacatatgtatgtccagatt 59
||||| ||||||||||||||||| | ||| ||| || |||||| ||||||| ||||||
Sbjct: 32 tctagaactggatgtgacatattctagtacgatgaatctggacagatgtatgctcagatt 91
Query: 60 tgttgtattaggatgtgtcacatctagtac 89
|| ||| ||| |||||||| |||| ||||
Sbjct: 92 cgtagtactagaatgtgtcatatctggtac 121
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||| |||| ||||||||| ||||||||||||
Sbjct: 75 tgtccaaatttattgtattagaatgtgtcacatc 42
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
||||||||||||| ||| ||||||| ||||||||
Sbjct: 75 tgtccagatttgtagtactaggatgcgtcacatc 42
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 gtattaggatgtgtcacatcta 85
||||||||||||||||||||||
Sbjct: 96 gtattaggatgtgtcacatcta 117
>RF00906;MIR1122;AAAA02005552.1/15961-15806 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 38 tggacatatgtatgtccagatttgttgtattaggatgtgtcacatc 83
|||||| |||||||| |||||| ||||||||||||||||||||
Sbjct: 70 tggacaaatgtatgttcagattcacagtattaggatgtgtcacatc 115
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 48 tatgtccagatttgttgtattaggatgtgtcacatcta 85
|||||| |||||| ||||| ||| ||||||||||||||
Sbjct: 34 tatgtctagatttattgtactagaatgtgtcacatcta 71
>RF00906;MIR1122;AAAA02030593.1/3842-3702 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tctagtactggatgtgacatat 22
||||||||||||||||||||||
Sbjct: 31 tctagtactggatgtgacatat 52
>RF00906;MIR1122;AAAA02021026.1/44639-44772 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||| |||||| ||| ||||||||||||||||
Sbjct: 61 tgtccaaatttgtagtactaggatgtgtcacatc 94
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||| ||||| |||||| ||||||||||||||||
Sbjct: 41 tgtctagattcgttgtactaggatgtgtcacatc 74
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||||||||| |||||||||
Sbjct: 82 tgtccagattcattgtattaggatatgtcacatc 115
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
||||||||||||| ||| ||||||| ||||||||
Sbjct: 75 tgtccagatttgtagtactaggatgcgtcacatc 42
>RF00906;MIR1122;AAAA02013097.1/8926-9081 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 agatttgttgtattaggatgtgtcacatct 84
||||| |||||||||||||||||| |||||
Sbjct: 87 agattcgttgtattaggatgtgtcccatct 116
>RF00906;MIR1122;AACV01008143.1/21832-21975 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| || || |||||||||||||||||
Sbjct: 70 tgtccagattcgtcgtgttaggatgtgtcacatc 103
>RF00906;MIR1122;AACV01022224.1/5549-5409 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tctagtactggatgtgacatat 22
||||||||||||||||||||||
Sbjct: 31 tctagtactggatgtgacatat 52
>RF00906;MIR1122;AAAA02009049.1/5149-5027 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
||||||||||||||||| ||| ||||| ||||||
Sbjct: 72 tgtccagatttgttgtactagtatgtgccacatc 39
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| || ||| ||||||||||||||||
Sbjct: 60 tgtccagattcgtagtactaggatgtgtcacatc 93
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||||||| |||||||||||| |||||||||
Sbjct: 82 tgtccagattcattgtattaggatatgtcacatc 115
>RF00906;MIR1122;AAAA02003006.1/3399-3554 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 cagatttgttgtattaggatgtgtcacatc 83
|||||| || ||||||||||||||||||||
Sbjct: 86 cagattcgtagtattaggatgtgtcacatc 115
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||| |||| |||||||||||| |||||||||
Sbjct: 83 tgtccaaatttattgtattaggatatgtcacatc 116
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tgtccagatttgttgtattaggatgtgtcacatc 83
|||||| ||| |||||| ||||||||||||||||
Sbjct: 47 tgtccaaattcgttgtactaggatgtgtcacatc 80
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 38 tggacatatgtatgtccagatttgttgtattaggatgtgtca 79
||||||||| | |||||||||| || ||| ||||||||||||
Sbjct: 71 tggacatatatctgtccagattcgtagtactaggatgtgtca 112
