miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 113 bits (57), Expect = 7e-25
Identities = 93/105 (88%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatg 109
|||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 47 gacacattctagtacaacgaatctggacagaggtatgtccagattcgtagtactaggatg 106
Query: 110 tgtcgcatcgagt-----gttggttttttatgggacggagggagt 149
|||| |||| ||| |||||||||||||||||||||||||||
Sbjct: 107 tgtcacatccagtactaggttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 89/105 (84%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatg 109
|||| ||| ||||| || ||||||||||||| ||||||| ||||||||||| ||||||||
Sbjct: 47 gacatattctagtataatgaatctggatagagatatgtccagattcgtagtcctaggatg 106
Query: 110 tgtcgcatcgagt-----gttggttttttatgggacggagggagt 149
|||| |||| || |||| ||||||||||||||||||||||
Sbjct: 107 tgtcacatccggtacgaggttgattttttatgggacggagggagt 151
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatg 109
||||||| |||||||||||||||||| || ||| |||| |||||||| |||||||||||
Sbjct: 47 gacacatcctagtacaacgaatctggacagtaatttgtccagattcgttgtactaggatg 106
Query: 110 tgtcgcatc 118
|||| ||||
Sbjct: 107 tgtcacatc 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 50 gacacattatagtacaacgaatctggatagaaata-tgtctagattcgtagtactaggat 108
||||||| |||||||||||||||||| | || || |||| |||||||| ||||||||||
Sbjct: 110 gacacatcctagtacaacgaatctggaca-aattactgtccagattcgttgtactaggat 52
Query: 109 gtgtcgcatc 118
||||| ||||
Sbjct: 51 gtgtcacatc 42
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatggga 139
||||||||||||||||||||||||||||| |||| || ||||||||| |||||||
Sbjct: 48 tgtctagattcgtagtactaggatgtgtcacatccggtactaggttggttttctatggga 107
Query: 140 cggagggagtg 150
|||||||||||
Sbjct: 108 cggagggagtg 118
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/73 (89%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 49 ggacacattatagtacaacgaatctggatagaaa-ta--tgtctagattcgtagtactag 105
|||||||| |||||| ||||||||||||||| | || |||||||||||||||||||||
Sbjct: 114 ggacacatcctagtactacgaatctggatagacactacttgtctagattcgtagtactag 55
Query: 106 gatgtgtcgcatc 118
|||||||| ||||
Sbjct: 54 gatgtgtcccatc 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 agattcgtagtactaggatgtgtc 113
||||||||||||||||||||||||
Sbjct: 90 agattcgtagtactaggatgtgtc 113
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatg 109
|||| ||| |||||| | |||| |||||| | ||||||| ||||||||||||||||||||
Sbjct: 46 gacatattctagtacgatgaatttggatatatatatgtccagattcgtagtactaggatg 105
Query: 110 tgtcgcatc 118
|||| ||||
Sbjct: 106 tgtcacatc 114
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%), Gaps = 5/65 (7%)
Strand = Plus / Minus
Query: 90 agattcgtagtactaggatgtgtcgcatcgagtgtt-----ggttttttatgggacggag 144
|||||||||||||||||||||||| |||| ||| || |||||||||||||||||||
Sbjct: 70 agattcgtagtactaggatgtgtcacatccagtattaggctggttttttatgggacggag 11
Query: 145 ggagt 149
|||||
Sbjct: 10 ggagt 6
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 agattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||||||||| ||||
Sbjct: 86 agattcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 81 aatatgtctagattcgtagtactaggatgtgtcgcatcgagt--gttggttttttatggg 138
|||||||| |||||| ||||| || |||||||| |||| || ||||||||||||||||
Sbjct: 66 aatatgtccagattcatagtattatgatgtgtcacatccggtaggttggttttttatggg 125
Query: 139 acggagggagt 149
|||||||||||
Sbjct: 126 acggagggagt 136
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 83 tatgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatgg 137
|||||| |||||||| ||| ||||||||||| |||| ||| |||||||||||||||
Sbjct: 56 tatgtccagattcgttgtaataggatgtgtcacatctagtcctaggttggttttttatgg 115
Query: 138 gacggagggagt 149
||||||||||||
Sbjct: 116 gacggagggagt 127
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 50 gacacattatagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatg 109
||||||| |||||| ||||||||||| ||| ||||||| |||||| ||||||||||||
Sbjct: 111 gacacatcctagtactacgaatctggacagatatatgtccagattcatagtactaggata 52
Query: 110 tgtc 113
||||
Sbjct: 51 tgtc 48
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 59 tagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatgtgtc 113
|||||| | ||||||||| | | || |||| ||||||||||||||||||||||||
Sbjct: 57 tagtactatgaatctggacatatatctgtccagattcgtagtactaggatgtgtc 111
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 130 gttggttttttatgggacggagggagt 156
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 84 atgtctagattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||||||||||||||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 84 atgtctagattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||||||||||||||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%), Gaps = 5/71 (7%)
Strand = Plus / Plus
Query: 84 atgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatggg 138
|||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 80 atgtctagattcgttttactaggatgtgtcacatccagtcctaggttggttttttatggg 139
Query: 139 acggagggagt 149
||| |||||||
Sbjct: 140 acgaagggagt 150
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
||||||||||||||||||||||||||||| ||||
Sbjct: 75 tgtctagattcgtagtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02027770.1/12261-12396 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatggga 139
|||| ||||||||||||||||||| |||| |||| ||| ||||||||| |||||||
Sbjct: 62 tgtccagattcgtagtactaggatatgtcacatccagtactaggttggttttgtatggga 121
Query: 140 cggagggagt 149
||||||||||
Sbjct: 122 cggagggagt 131
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 49 ggacacattatagtacaacgaatctggatagaaatatgtctagattcgtagtactaggat 108
||||||||| |||||||||||||||||| || ||| || |||||||| |||||||||
Sbjct: 46 ggacacattctagtacaacgaatctggacaggggtatatccagattcgttgtactaggaa 105
Query: 109 gtgtcgcatc 118
||||| ||||
Sbjct: 106 gtgtctcatc 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 59 tagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||||| | |||| |||||||| ||||||| ||||||| ||||
Sbjct: 101 tagtacaacgaatctggatatacccctgtccagattcgttgtactagaatgtgtcccatc 42
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%), Gaps = 5/73 (6%)
Strand = Plus / Plus
Query: 82 atatgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatg 136
||||||| |||||||||||| ||||||||||| |||| || ||||||||||||||
Sbjct: 65 atatgtccagattcgtagtaataggatgtgtcacatccggtactaggttggttttttatg 124
Query: 137 ggacggagggagt 149
|||| ||||||||
Sbjct: 125 ggacagagggagt 137
>RF00906;MIR1122;AAAA02020879.1/5788-5634 39946:Oryza sativa Indica
Group
Length = 155
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 62 tacaacgaatctggatagaaatatgtctagattcgtagtactaggatgtgtc 113
||||| ||||||||||||| ||||||| |||||| ||||| ||| |||||||
Sbjct: 58 tacaatgaatctggatagatatatgtccagattcatagtattagaatgtgtc 109
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 83 tatgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatgg 137
|||||| |||||| || |||||||||||||| |||| || |||||||||||||||
Sbjct: 80 tatgtccagattcataatactaggatgtgtcacatctggtactaggttggttttttatgg 139
Query: 138 gacggagggagt 149
||||||||||||
Sbjct: 140 gacggagggagt 151
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 83 tatgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatgg 137
|||||| |||||| ||||||||| ||||||| |||| || |||||||||||||||
Sbjct: 79 tatgtccagattcatagtactagaatgtgtcacatccggtattaggttggttttttatgg 138
Query: 138 gacggagggagt 149
||||||||||||
Sbjct: 139 gacggagggagt 150
>RF00906;MIR1122;AAAA02026860.1/4609-4722 39946:Oryza sativa Indica
Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 83 gttggttttttatgggacggagggagt 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 128 ttttttatgggacggagggagt 149
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AC229932.1/30140-30028 63629:Oryza minuta
Length = 113
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 82 gttggttttttatgggacggagggagt 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 123 gttggttttttatgggacggagggagt 149
|||| ||||||||||||||||||||||
Sbjct: 32 gttgattttttatgggacggagggagt 6
>RF00906;MIR1122;AP008210.1/21918444-21918599 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 125 gttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 84 atgtctagattcgtagtactaggatgtgtcgcatc 118
|||||||||||| ||||||||||||||||| ||||
Sbjct: 76 atgtctagattcttagtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02036878.1/803-666 39946:Oryza sativa Indica
Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 107 gttggttttttatgggacggagggagt 133
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 85 gttggttttttatgggacggagggagt 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02031253.1/370-507 39946:Oryza sativa Indica
Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 107 gttggttttttatgggacggagggagt 133
>RF00906;MIR1122;AP004457.2/96948-96835 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 83 gttggttttttatgggacggagggagt 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 128 ttttttatgggacggagggagt 149
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;ABRL01000514.1/8970-9117 65489:Oryza barthii
Length = 148
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 84 atgtctagattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||||||||||| ||| ||||
Sbjct: 76 atgtctagattcgtagtactaggatgggtctcatc 42
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 50 gacacattatagtacaacgaatctgga 76
|||||||||||||||||||||||||||
Sbjct: 111 gacacattatagtacaacgaatctgga 85
>RF00906;MIR1122;AACV01006502.1/3843-3983 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||||||||||||||||||||||||||
Sbjct: 110 gttggttttttatgggacggagggagt 136
>RF00906;MIR1122;AAAA02020247.1/9682-9526 39946:Oryza sativa Indica
Group
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 49 ggacacattatagtacaacgaatctggata 78
|||||| |||||||||||||||||||||||
Sbjct: 112 ggacactttatagtacaacgaatctggata 83
>RF00906;MIR1122;AAAA02004369.1/19477-19347 39946:Oryza sativa
Indica Group
Length = 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 85 tgtctagattcgtagtactaggatgt 110
||||||||||||||||||||||||||
Sbjct: 72 tgtctagattcgtagtactaggatgt 47
>RF00906;MIR1122;AAAA02027326.1/570-454 39946:Oryza sativa Indica
Group
Length = 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%), Gaps = 5/58 (8%)
Strand = Plus / Plus
Query: 97 tagtactaggatgtgtcgcatcgagt-----gttggttttttatgggacggagggagt 149
||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||
Sbjct: 55 tagtactaggatgtgtcacatccagtactaggttggttttttatgagacggagggagt 112
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
||||||||||||| ||||||||||||||| ||||
Sbjct: 41 tgtctagattcgttgtactaggatgtgtcacatc 74
>RF00906;MIR1122;AACV01025590.1/274-429 39947:Oryza sativa Japonica
Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 124 ttggttttttatgggacggagggagt 149
||||||||||||||||||||||||||
Sbjct: 126 ttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AP008218.1/22974465-22974372 39947:Oryza sativa
Japonica Group
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 124 ttggttttttatgggacggagggagt 149
||||||||||||||||||||||||||
Sbjct: 64 ttggttttttatgggacggagggagt 89
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 87/106 (82%), Gaps = 6/106 (5%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctggatagaaat-atgtctagattcgtagtactaggat 108
|||| ||| |||||| | ||||||||||| | || ||||| |||||| ||||||||||||
Sbjct: 47 gacatattctagtactatgaatctggatatacattatgtccagattcatagtactaggat 106
Query: 109 gtgtcgcatcgagt-----gttggttttttatgggacggagggagt 149
| || |||| ||| ||||||||||||||||||| |||||||
Sbjct: 107 atttcacatctagtactaggttggttttttatgggacgaagggagt 152
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa Indica
Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatggga 139
|||| |||||||| ||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 62 tgtccagattcgttgtactaggatgtgtcacatccagtattagattggttttttatggga 121
Query: 140 cggagg 145
||||||
Sbjct: 122 cggagg 127
>RF00906;MIR1122;AP008209.1/29659053-29658899 39947:Oryza sativa
Japonica Group
Length = 155
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 59 tagtacaacgaatctggatagaaatatgtctagattcgtagtactaggat 108
|||||| ||||||||| | || | |||||||||||||||||||||||||
Sbjct: 56 tagtactacgaatctgaacagggacatgtctagattcgtagtactaggat 105
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa Japonica
Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| |||||||||||||||||||||||| ||||
Sbjct: 60 tgtccagattcgtagtactaggatgtgtcacatc 93
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| |||||||||||||||||||||||| ||||
Sbjct: 62 tgtccagattcgtagtactaggatgtgtcccatc 95
>RF00906;MIR1122;AAAA02031413.1/6510-6355 39946:Oryza sativa Indica
Group
Length = 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 65 aacgaatctggatagaaatatgtctagattcgtagtactaggatgt 110
||||||| | |||||||| ||||||||||||| ||||||||||||
Sbjct: 62 aacgaatttagatagaaagttgtctagattcgttgtactaggatgt 107
>RF00906;MIR1122;AP008209.1/18198148-18198281 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 124 ttggttttttatgggacggagggagt 149
||||||||||||||||||||||||||
Sbjct: 104 ttggttttttatgggacggagggagt 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 tatgtctagattcgtagtactag 105
|||||||||||||||||||||||
Sbjct: 80 tatgtctagattcgtagtactag 102
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| |||||||||||||||||||||||| ||||
Sbjct: 75 tgtccagattcgtagtactaggatgtgtcccatc 42
>RF00906;MIR1122;ABRL01001045.1/1775-1911 65489:Oryza barthii
Length = 137
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctggata 78
|||||||| ||||||||||||||||||||
Sbjct: 48 gacacattctagtacaacgaatctggata 76
>RF00906;MIR1122;AAAA02014808.1/30258-30413 39946:Oryza sativa
Indica Group
Length = 156
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 56 ttatagtacaacgaatctggatagaaatatgtctagattcgtagtacta 104
||||||||||| ||||||||||| || ||||||||||||| ||||||
Sbjct: 53 ttatagtacaatgaatctggatatttatctgtctagattcgttgtacta 101
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa Japonica
Group
Length = 161
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 atgtctagattcgtagtactaggat 108
|||||||||||||||||||||||||
Sbjct: 86 atgtctagattcgtagtactaggat 110
>RF00906;MIR1122;AC025905.3/47917-48072 4530:Oryza sativa (rice)
Length = 156
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 56 ttatagtacaacgaatctggatagaaatatgtctagattcgtagtacta 104
|||||| |||||||||||||| ||| | ||||| |||||||| ||||||
Sbjct: 53 ttataggacaacgaatctggacagatacatgtccagattcgttgtacta 101
>RF00906;MIR1122;AC135864.5/73183-73340 39947:Oryza sativa Japonica
Group
Length = 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 62 tacaacgaatctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatc 118
||||||||| ||||| || | |||||| |||||||| ||| ||||||||||| ||||
Sbjct: 98 tacaacgaaactggacaggactatgtccagattcgtcgtattaggatgtgtcccatc 42
>RF00906;MIR1122;AAAA02016998.1/2818-2950 39946:Oryza sativa Indica
Group
Length = 133
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtc 113
|||||||||||||||||||||||| ||||
Sbjct: 59 tgtctagattcgtagtactaggatatgtc 87
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 90 agattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||||||||| ||||
Sbjct: 66 agattcgtagtactaggatgtgtcacatc 38
>RF00906;MIR1122;AP005416.3/143775-143639 39947:Oryza sativa
Japonica Group
Length = 137
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%), Gaps = 5/73 (6%)
Strand = Plus / Minus
Query: 82 atatgtctagattcgtagtactaggatgtgtcgcatcgagt-----gttggttttttatg 136
|||||| ||||||||||||| |||||| |||| ||||| | |||| |||||||||
Sbjct: 78 atatgtttagattcgtagtattaggatatgtcacatcggatactatgttgattttttatg 19
Query: 137 ggacggagggagt 149
|||||||||||||
Sbjct: 18 ggacggagggagt 6
>RF00906;MIR1122;AAAA02010127.1/111408-111296 39946:Oryza sativa
Indica Group
Length = 113
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 125 tggttttttatgggacggagggagt 149
|||||||||||||||||||||||||
Sbjct: 84 tggttttttatgggacggagggagt 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 128 ttttttatgggacggagggagt 149
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AC084282.6/14827-14672 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 66 acgaatctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatc 118
||||||||||||| || ||||| ||||||||||| |||| ||||||| ||||
Sbjct: 63 acgaatctggataagaacatgtccagattcgtagttctagaatgtgtcacatc 115
>RF00906;MIR1122;AP008208.1/277556-277420 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 126 ggttttttatgggacggagggagt 149
||||||||||||||||||||||||
Sbjct: 29 ggttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008213.1/14562972-14563105 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 tctagattcgtagtactaggatgtgtcgcatc 118
||||||||||||||||||| ||||||| ||||
Sbjct: 60 tctagattcgtagtactagaatgtgtcacatc 91
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 83 tatgtctagattcgtagtactaggatgtgtcgcatc 118
||||||||||||| | ||||||||||||||| ||||
Sbjct: 77 tatgtctagattcattgtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctggat 77
|||||||| |||||||||||||||||||
Sbjct: 47 gacacattctagtacaacgaatctggat 74
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gattcgtagtactaggatgtgtcgcatc 118
||||||||||||||||||||||| ||||
Sbjct: 87 gattcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AAAA02021800.1/3616-3483 39946:Oryza sativa Indica
Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 87 tctagattcgtagtactaggatgtgtcgcatc 118
||||||||||||||||||| ||||||| ||||
Sbjct: 75 tctagattcgtagtactagaatgtgtcacatc 44
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 59 tagtacaacgaatctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatc 118
|||| ||||||||||||| | | | ||||||||||||| ||| ||||||||||| ||||
Sbjct: 101 tagtgcaacgaatctggacaaatctctgtctagattcgttgtattaggatgtgtcccatc 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 49 ggacacattatagtacaacgaatctggatagaaatatgtctagattcgtagtactaggat 108
|||||||| || |||||||||||| || ||| || |||| |||||||| | ||||||||
Sbjct: 46 ggacacatcctaatacaacgaatctagacagagatttgtccagattcgttgcactaggat 105
Query: 109 gtgt 112
||||
Sbjct: 106 gtgt 109
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 50 gacacattatagtacaacgaatctggatagaaa-tatgtctagattcgtagtactaggat 108
|||||||| |||||||||||||||||| | ||| |||| |||||||| ||||||||||
Sbjct: 111 gacacattctagtacaacgaatctggacataaagcctgtccagattcgttgtactaggat 52
>RF00906;MIR1122;AP003711.3/78857-78701 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 ggacacattatagtacaacgaatctgga 76
|||||| |||||||||||||||||||||
Sbjct: 46 ggacactttatagtacaacgaatctgga 73
>RF00906;MIR1122;AAAA02014383.1/51051-51164 39946:Oryza sativa
Indica Group
Length = 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 126 ggttttttatgggacggagggagt 149
||||||||||||||||||||||||
Sbjct: 86 ggttttttatgggacggagggagt 109
>RF00906;MIR1122;AACV01003164.1/19294-19158 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 126 ggttttttatgggacggagggagt 149
||||||||||||||||||||||||
Sbjct: 109 ggttttttatgggacggagggagt 132
>RF00906;MIR1122;AB206885.1/121-10 39947:Oryza sativa Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 122 tgttggttttttatgggacggagg 145
||||||||||||||||||||||||
Sbjct: 33 tgttggttttttatgggacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 85 gttttttatgggacggagggagt 107
>RF00906;MIR1122;AP004012.3/83493-83639 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 126 ggttttttatgggacggagggagt 149
||||||||||||||||||||||||
Sbjct: 119 ggttttttatgggacggagggagt 142
>RF00906;MIR1122;AP006067.3/111180-111270 39947:Oryza sativa
Japonica Group
Length = 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 126 ggttttttatgggacggagggagt 149
||||||||||||||||||||||||
Sbjct: 29 ggttttttatgggacggagggagt 6
>RF00906;MIR1122;AACV01016060.1/4048-4184 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 122 tgttggttttttatgggacggagggagt 149
|||| |||||||||||||||||||||||
Sbjct: 105 tgttagttttttatgggacggagggagt 132
>RF00906;MIR1122;AC037426.12/45307-45458 39947:Oryza sativa Japonica
Group
Length = 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 85 tgtctagattcgtagtactaggatgtg 111
||||||||||| |||||||||||||||
Sbjct: 75 tgtctagattcatagtactaggatgtg 49
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 50 gacacattatagtacaacgaatctgga 76
||||| |||||||||||||||||||||
Sbjct: 111 gacactttatagtacaacgaatctgga 85
>RF00906;MIR1122;AP008214.1/666276-666163 39947:Oryza sativa
Japonica Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02005541.1/45284-45440 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 atagtacaacgaatctggataga 80
|||||||||||||||||||||||
Sbjct: 55 atagtacaacgaatctggataga 77
>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa
Indica Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctgga 76
|||||||| ||||||||||||||||||
Sbjct: 48 gacacattctagtacaacgaatctgga 74
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 ggtctactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 160 ggtctactccctccgtcccaaaa 138
>RF00906;MIR1122;AAAA02022804.1/34746-34633 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||||||||||| |||||||
Sbjct: 83 gttggttttttatgggacgaagggagt 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 128 ttttttatgggacggagggagt 149
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02017131.1/7123-7250 39946:Oryza sativa Indica
Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02005552.1/15961-15806 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||||||||||| |||||||
Sbjct: 125 gttggttttttatgggacgaagggagt 151
>RF00906;MIR1122;AC104429.2/50540-50620 39947:Oryza sativa Japonica
Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||| |||||||||||||||
Sbjct: 50 gttggttttttttgggacggagggagt 76
>RF00906;MIR1122;AAAA02007310.1/1161-1273 39946:Oryza sativa Indica
Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 123 gttggttttttatgggacggagggagt 149
|||| ||||||||||||||||||||||
Sbjct: 32 gttgattttttatgggacggagggagt 6
>RF00906;MIR1122;AC092389.4/93429-93555 39947:Oryza sativa Japonica
Group
Length = 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
|||| ||||||||||||||||||||||
Sbjct: 96 gttgattttttatgggacggagggagt 122
>RF00906;MIR1122;AP004566.3/93541-93654 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 87 gttttttatgggacggagggagt 109
>RF00906;MIR1122;AAAA02035130.1/4826-4960 39946:Oryza sativa
Indica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 50 gacacattatagtacaacgaatctgga 76
|||||||| ||||||||||||||||||
Sbjct: 89 gacacattctagtacaacgaatctgga 63
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| |||||||| ||||||| ||||||||||||
Sbjct: 61 tgtccagattcgttgtactagaatgtgtcgcatc 94
>RF00906;MIR1122;AAAA02007985.1/61647-61567 39946:Oryza sativa
Indica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||| |||||||||||||||
Sbjct: 32 gttggttttttttgggacggagggagt 6
>RF00906;MIR1122;AAAA02007456.1/5960-5794 39946:Oryza sativa Indica
Group
Length = 167
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 tatgtctagattcgtagtactaggatg 109
|||||||||||||||||| ||||||||
Sbjct: 101 tatgtctagattcgtagtcctaggatg 127
>RF00906;MIR1122;AC217582.2/26328-26173 4537:Oryza punctata
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||| |||||||||||||||||
Sbjct: 125 gttggttttctatgggacggagggagt 151
>RF00906;MIR1122;AP008209.1/34072110-34071977 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 107 gttttttatgggacggagggagt 129
>RF00906;MIR1122;AACV01012113.1/55186-55058 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 102 gttttttatgggacggagggagt 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 128 ttttttatgggacggagggagt 149
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| ||||||||||||||| |||||||| ||||
Sbjct: 76 tgtccagattcgtagtactaagatgtgtcacatc 43
>RF00906;MIR1122;AACV01014391.1/4590-4745 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||||||||| |||||||||
Sbjct: 125 gttggttttttatgggatggagggagt 151
>RF00906;MIR1122;AP008209.1/30325748-30325904 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 61 gtacaacgaatctggata-gaaatatgtctagattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||| |||| ||||| |||||| | |||||| || ||||| ||||
Sbjct: 58 gtacaacgaatctggataggaaacatgtccagattcattgtactatgaagtgtcacatc 116
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 85 tgtctagattcgtagtactaggatgtg 111
||||||||||| |||||||||||||||
Sbjct: 75 tgtctagattcatagtactaggatgtg 49
>RF00906;MIR1122;CR855173.1/25497-25408 4530:Oryza sativa (rice)
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||| |||||||||||||||
Sbjct: 59 gttggttttttgtgggacggagggagt 85
>RF00906;MIR1122;AAAA02030479.1/4787-4952 39946:Oryza sativa Indica
Group
Length = 166
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 atagtacaacgaatctggataga 80
|||||||||||||||||||||||
Sbjct: 113 atagtacaacgaatctggataga 91
>RF00906;MIR1122;AACV01013846.1/34700-34544 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 gacacattatagtacaacgaatctgga 76
||||| |||||||||||||||||||||
Sbjct: 47 gacactttatagtacaacgaatctgga 73
>RF00906;MIR1122;AACV01022113.1/70289-70455 39947:Oryza sativa
Japonica Group
Length = 167
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 58 atagtacaacgaatctggataga 80
|||||||||||||||||||||||
Sbjct: 114 atagtacaacgaatctggataga 92
>RF00906;MIR1122;AAAA02018982.1/10233-10100 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||| |||||||||||||||
Sbjct: 103 gttggttttttgtgggacggagggagt 129
>RF00906;MIR1122;AACV01016857.1/872-736 39947:Oryza sativa Japonica
Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagt 132
>RF00906;MIR1122;AP002483.1/24463-24606 39947:Oryza sativa Japonica
Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 117 gttttttatgggacggagggagt 139
>RF00906;MIR1122;AC133007.4/76186-76053 39947:Oryza sativa Japonica
Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AACV01005927.1/30178-30314 39947:Oryza sativa
Japonica Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||||||||| |||||||||
Sbjct: 106 gttggttttttatgggatggagggagt 132
>RF00906;MIR1122;AP008217.1/3396232-3396120 39947:Oryza sativa
Japonica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagt 108
>RF00906;MIR1122;AACV01014928.1/15280-15408 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagg 145
|||||||||||||||||||||||
Sbjct: 98 gttggttttttatgggacggagg 120
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatcg 119
|||| ||||||||||||||||| |||||| |||||
Sbjct: 49 tgtccagattcgtagtactaggttgtgtcacatcg 83
>RF00906;MIR1122;AC120991.3/108993-108909 39947:Oryza sativa
Japonica Group
Length = 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 58 gttttttatgggacggagggagt 80
>RF00906;MIR1122;AP008214.1/23959479-23959591 39947:Oryza sativa
Japonica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 127 gttttttatgggacggagggagt 149
|||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagt 108
>RF00906;MIR1122;AL663000.4/107766-107906 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 84 atgtctagattcgtagtactaggatgtgtcgcatc 118
||||||||||||||||| ||||||| |||| ||||
Sbjct: 76 atgtctagattcgtagtcctaggatatgtcacatc 42
>RF00906;MIR1122;AP008209.1/128298-128150 39947:Oryza sativa
Japonica Group
Length = 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 gttggttttttatgggacggagggagt 149
||||||||||||||| |||||||||||
Sbjct: 118 gttggttttttatggaacggagggagt 144
>RF00906;MIR1122;AAAA02010965.1/12989-13143 39946:Oryza sativa
Indica Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 59 tagtacaacgaatctggatagaaatatgtctagattcgtagtactaggat 108
|||||| ||||||||| | || | ||||| |||||||||||||||||||
Sbjct: 100 tagtactacgaatctgaacagggacatgtccagattcgtagtactaggat 51
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 89 tagattcgtagtactaggatgtgtcgcatc 118
|||||||||||||||||||| |||| ||||
Sbjct: 71 tagattcgtagtactaggatatgtcccatc 42
>RF00906;MIR1122;AACV01007649.1/5705-5795 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gtctactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 2 gtctactccctccgtcccaaaa 23
>RF00906;MIR1122;AC105262.3/31526-31369 39947:Oryza sativa Japonica
Group
Length = 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tctagattcgtagtactaggat 108
||||||||||||||||||||||
Sbjct: 73 tctagattcgtagtactaggat 52
>RF00906;MIR1122;AP008211.1/18929382-18929520 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 attcgtagtactaggatgtgtcgcat 117
|||| |||||||||||||||||||||
Sbjct: 72 attcatagtactaggatgtgtcgcat 97
>RF00906;MIR1122;AAAA02003495.1/21560-21672 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 128 ttttttatgggacggagggagt 149
||||||||||||||||||||||
Sbjct: 87 ttttttatgggacggagggagt 108
>RF00906;MIR1122;AP008216.1/16113535-16113433 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gtctactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 2 gtctactccctccgtcccaaaa 23
>RF00906;MIR1122;AAAA02012853.1/6255-6365 39946:Oryza sativa Indica
Group
Length = 111
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 128 ttttttatgggacggagggagt 149
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02018547.1/31962-31829 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
||||||||||| |||||||||||| |||| ||||
Sbjct: 60 tgtctagattcatagtactaggatatgtcacatc 93
>RF00906;MIR1122;AL837527.2/76529-76400 4530:Oryza sativa (rice)
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| ||||| |||||||||||||||||| ||||
Sbjct: 56 tgtccagattggtagtactaggatgtgtctcatc 89
>RF00906;MIR1122;AACV01024204.1/3332-3459 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 gtctactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 127 gtctactccctccgtcccaaaa 106
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 81 aatatgtctagattcgtagtactaggatgtgtcgcatc 118
|||||||| |||||| | ||||||||||||||| ||||
Sbjct: 66 aatatgtccagattcattgtactaggatgtgtcacatc 103
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| |||||||| ||||||||||||||| ||||
Sbjct: 43 tgtccagattcgttgtactaggatgtgtcacatc 76
>RF00906;MIR1122;AP008218.1/23548296-23548451 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 124 ttggttttttatgggacggagggagt 149
|||||||||||||| |||||||||||
Sbjct: 31 ttggttttttatggaacggagggagt 6
>RF00906;MIR1122;AP008207.1/18994542-18994403 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 gtctactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 139 gtctactccctccgtcccaaaa 118
>RF00906;MIR1122;AC138001.2/59407-59266 39947:Oryza sativa Japonica
Group
Length = 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 124 ttggttttttatgggacggagggagt 149
||||||||||||||||| ||||||||
Sbjct: 112 ttggttttttatgggacagagggagt 137
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 85 tgtctagattcgtagtactaggatgtgtcgcatc 118
|||| |||||||| ||||||||||||||| ||||
Sbjct: 75 tgtccagattcgttgtactaggatgtgtcccatc 42
