miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 105 bits (53), Expect = 2e-22
Identities = 95/109 (87%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactag 112
|||||||||||| |||||||||||||||||| ||| |||||| | ||||||||||||||
Sbjct: 43 atgtgacacattctagtacaacgaatctggacagaggtatgtccagattcgtagtactag 102
Query: 113 gatgtgtcgcatcgagt-----ggtggttttttatgggacggagggagt 156
|||||||| |||| ||| | |||||||||||||||||||||||||
Sbjct: 103 gatgtgtcacatccagtactaggttggttttttatgggacggagggagt 151
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactag 112
||||||||||| |||||||||||||||||| || ||| |||| | |||||| |||||||
Sbjct: 43 atgtgacacatcctagtacaacgaatctggacagtaatttgtccagattcgttgtactag 102
Query: 113 gatgtgtcgcatc 125
|||||||| ||||
Sbjct: 103 gatgtgtcacatc 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaata-tgtctacattcgtagtacta 111
||||||||||| |||||||||||||||||| | || || |||| | |||||| ||||||
Sbjct: 114 atgtgacacatcctagtacaacgaatctggaca-aattactgtccagattcgttgtacta 56
Query: 112 ggatgtgtcgcatc 125
||||||||| ||||
Sbjct: 55 ggatgtgtcacatc 42
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactag 112
|||||||| ||| ||||| || ||||||||||||| ||||||| | ||||||||| ||||
Sbjct: 43 atgtgacatattctagtataatgaatctggatagagatatgtccagattcgtagtcctag 102
Query: 113 gatgtgtcgcatc 125
|||||||| ||||
Sbjct: 103 gatgtgtcacatc 115
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactag 112
|||||||| ||| |||||| | |||| |||||| | ||||||| | ||||||||||||||
Sbjct: 42 atgtgacatattctagtacgatgaatttggatatatatatgtccagattcgtagtactag 101
Query: 113 gatgtgtcgcatc 125
|||||||| ||||
Sbjct: 102 gatgtgtcacatc 114
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%), Gaps = 5/63 (7%)
Strand = Plus / Minus
Query: 99 attcgtagtactaggatgtgtcgcatcgagt-----ggtggttttttatgggacggaggg 153
|||||||||||||||||||||| |||| ||| | ||||||||||||||||||||||
Sbjct: 68 attcgtagtactaggatgtgtcacatccagtattaggctggttttttatgggacggaggg 9
Query: 154 agt 156
|||
Sbjct: 8 agt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 attcgtagtactaggatgtgtcgcatc 125
|||||||||||||||||||||| ||||
Sbjct: 88 attcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
|||||||||||||||||||||||||||||||
Sbjct: 115 atgtgacacattatagtacaacgaatctgga 85
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/72 (87%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 57 gacacattatagtacaacgaatctggatagaaa-ta--tgtctacattcgtagtactagg 113
||||||| |||||| ||||||||||||||| | || |||||| |||||||||||||||
Sbjct: 113 gacacatcctagtactacgaatctggatagacactacttgtctagattcgtagtactagg 54
Query: 114 atgtgtcgcatc 125
||||||| ||||
Sbjct: 53 atgtgtcccatc 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 attcgtagtactaggatgtgtc 120
||||||||||||||||||||||
Sbjct: 92 attcgtagtactaggatgtgtc 113
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 56 tgacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactaggat 115
|||||||| |||||| ||||||||||| ||| ||||||| | |||| ||||||||||||
Sbjct: 112 tgacacatcctagtactacgaatctggacagatatatgtccagattcatagtactaggat 53
Query: 116 gtgtc 120
||||
Sbjct: 52 atgtc 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 132 tggttttttatgggacggagggagt 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 66 tagtacaacgaatctggatagaaatatgtctacattcgtagtactaggatgtgtc 120
|||||| | ||||||||| | | || |||| | ||||||||||||||||||||||
Sbjct: 57 tagtactatgaatctggacatatatctgtccagattcgtagtactaggatgtgtc 111
>RF00906;MIR1122;AAAA02020879.1/5788-5634 39946:Oryza sativa Indica
Group
Length = 155
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactag 112
|||||||||||| || ||||| ||||||||||||| ||||||| | |||| ||||| |||
Sbjct: 43 atgtgacacattcta-tacaatgaatctggatagatatatgtccagattcatagtattag 101
Query: 113 gatgtgtc 120
|||||||
Sbjct: 102 aatgtgtc 109
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
||||||||| |||||||||||||||||||||
Sbjct: 115 atgtgacactttatagtacaacgaatctgga 85
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 91 atgtctacattcgtagtactaggatgtgtcgcatc 125
||||||| |||||||||||||||||||||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 91 atgtctacattcgtagtactaggatgtgtcgcatc 125
||||||| |||||||||||||||||||||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
|||||||||||| ||||||||||||||||||
Sbjct: 115 atgtgacacattctagtacaacgaatctgga 85
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%), Gaps = 5/71 (7%)
Strand = Plus / Plus
Query: 92 tgtctacattcgtagtactaggatgtgtcgcatcgagt-----ggtggttttttatggga 146
|||||| |||||||||||||||||||||| |||| || | ||||||| |||||||
Sbjct: 48 tgtctagattcgtagtactaggatgtgtcacatccggtactaggttggttttctatggga 107
Query: 147 cggagggagtg 157
|||||||||||
Sbjct: 108 cggagggagtg 118
>RF00906;MIR1122;AACV01013846.1/34700-34544 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
||||||||| |||||||||||||||||||||
Sbjct: 43 atgtgacactttatagtacaacgaatctgga 73
>RF00906;MIR1122;ABRL01001045.1/1775-1911 65489:Oryza barthii
Length = 137
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 56 tgacacattatagtacaacgaatctggata 85
||||||||| ||||||||||||||||||||
Sbjct: 47 tgacacattctagtacaacgaatctggata 76
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 92 tgtctacattcgtagtactaggatgtgtcgcatc 125
|||||| |||||||||||||||||||||| ||||
Sbjct: 75 tgtctagattcgtagtactaggatgtgtcacatc 42
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02020247.1/9682-9526 39946:Oryza sativa Indica
Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 57 gacacattatagtacaacgaatctggata 85
||||| |||||||||||||||||||||||
Sbjct: 111 gacactttatagtacaacgaatctggata 83
>RF00906;MIR1122;AAAA02026860.1/4609-4722 39946:Oryza sativa Indica
Group
Length = 114
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 85 tggttttttatgggacggagggagt 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 tgacacattatagtacaacgaatctggat 84
||||||||| |||||||||||||||||||
Sbjct: 46 tgacacattctagtacaacgaatctggat 74
>RF00906;MIR1122;AAAA02029204.1/1438-1301 39946:Oryza sativa
Indica Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggata 85
|||||||||||| |||||| |||||||||||||
Sbjct: 43 atgtgacacattttagtactacgaatctggata 75
>RF00906;MIR1122;AC229932.1/30140-30028 63629:Oryza minuta
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 84 tggttttttatgggacggagggagt 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008210.1/21918444-21918599 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 127 tggttttttatgggacggagggagt 151
>RF00906;MIR1122;AACV01025590.1/274-429 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 127 tggttttttatgggacggagggagt 151
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 112 tggttttttatgggacggagggagt 136
>RF00906;MIR1122;AP008218.1/22974465-22974372 39947:Oryza sativa
Japonica Group
Length = 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 65 tggttttttatgggacggagggagt 89
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 103 tggttttttatgggacggagggagt 127
>RF00906;MIR1122;AAAA02036878.1/803-666 39946:Oryza sativa Indica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 109 tggttttttatgggacggagggagt 133
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 87 tggttttttatgggacggagggagt 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02031253.1/370-507 39946:Oryza sativa Indica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 109 tggttttttatgggacggagggagt 133
>RF00906;MIR1122;AAAA02010127.1/111408-111296 39946:Oryza sativa
Indica Group
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 84 tggttttttatgggacggagggagt 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02031413.1/6510-6355 39946:Oryza sativa Indica
Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactag 112
|||||| |||| ||| || ||||||| | |||||||| |||||| |||||| |||||||
Sbjct: 43 atgtgatacatcataatataacgaatttagatagaaagttgtctagattcgttgtactag 102
Query: 113 gatgt 117
|||||
Sbjct: 103 gatgt 107
>RF00906;MIR1122;AP008209.1/18198148-18198281 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 105 tggttttttatgggacggagggagt 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AP004457.2/96948-96835 39947:Oryza sativa Japonica
Group
Length = 114
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 85 tggttttttatgggacggagggagt 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 127 tggttttttatgggacggagggagt 151
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 57 gacacattatagtacaacgaatctggatagaaatatgtctacattcgtagtactaggatg 116
|||||||| |||||||||||||||||| || ||| || | |||||| ||||||||| |
Sbjct: 47 gacacattctagtacaacgaatctggacaggggtatatccagattcgttgtactaggaag 106
Query: 117 tgtcgcatc 125
|||| ||||
Sbjct: 107 tgtctcatc 115
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 126 tggttttttatgggacggagggagt 150
>RF00906;MIR1122;AACV01006502.1/3843-3983 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 132 tggttttttatgggacggagggagt 156
|||||||||||||||||||||||||
Sbjct: 112 tggttttttatgggacggagggagt 136
>RF00906;MIR1122;ABRL01000294.1/23842-24000 65489:Oryza barthii
Length = 159
Score = 48.1 bits (24), Expect = 4e-05
Identities = 86/106 (81%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 18 tactccctccgtcc---aaaaagtgaatctagctctgtatgtgacacattatagtacaac 74
|||||||||||||| ||||| |||||||| ||| |||||||| ||| |||||| |
Sbjct: 5 tactccctccgtcctataaaaaacgaatctagaactggatgtgacatattctagtacgat 64
Query: 75 gaatctggatagaaatatgtctacattcgtagtactaggatgtgtc 120
||||||||| ||| |||| | |||||||||||||| |||||||
Sbjct: 65 gaatctggacagatgtatgctcagattcgtagtactagaatgtgtc 110
>RF00906;MIR1122;AP008208.1/277556-277420 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 133 ggttttttatgggacggagggagt 156
||||||||||||||||||||||||
Sbjct: 29 ggttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa
Indica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 56 tgacacattatagtacaacgaatctgga 83
||||||||| ||||||||||||||||||
Sbjct: 47 tgacacattctagtacaacgaatctgga 74
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 91/112 (81%), Gaps = 6/112 (5%)
Strand = Plus / Plus
Query: 51 gtatgtgacacattatagtacaacgaatctggataga-aatatgtctacattcgtagtac 109
|||||||||| ||| |||||| | ||||||||||| | | |||||| | |||| ||||||
Sbjct: 41 gtatgtgacatattctagtactatgaatctggatatacattatgtccagattcatagtac 100
Query: 110 taggatgtgtcgcatcgagt-----ggtggttttttatgggacggagggagt 156
|||||| | || |||| ||| | ||||||||||||||||| |||||||
Sbjct: 101 taggatatttcacatctagtactaggttggttttttatgggacgaagggagt 152
>RF00906;MIR1122;AAAA02014383.1/51051-51164 39946:Oryza sativa
Indica Group
Length = 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 133 ggttttttatgggacggagggagt 156
||||||||||||||||||||||||
Sbjct: 86 ggttttttatgggacggagggagt 109
>RF00906;MIR1122;AACV01003164.1/19294-19158 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 133 ggttttttatgggacggagggagt 156
||||||||||||||||||||||||
Sbjct: 109 ggttttttatgggacggagggagt 132
>RF00906;MIR1122;AP004012.3/83493-83639 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 133 ggttttttatgggacggagggagt 156
||||||||||||||||||||||||
Sbjct: 119 ggttttttatgggacggagggagt 142
>RF00906;MIR1122;AP006067.3/111180-111270 39947:Oryza sativa
Japonica Group
Length = 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 133 ggttttttatgggacggagggagt 156
||||||||||||||||||||||||
Sbjct: 29 ggttttttatgggacggagggagt 6
>RF00906;MIR1122;AC037426.12/45307-45458 39947:Oryza sativa Japonica
Group
Length = 152
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008214.1/666276-666163 39947:Oryza sativa
Japonica Group
Length = 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02005541.1/45284-45440 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 atagtacaacgaatctggataga 87
|||||||||||||||||||||||
Sbjct: 55 atagtacaacgaatctggataga 77
>RF00906;MIR1122;AACV01013196.1/2181-2029 39947:Oryza sativa
Japonica Group
Length = 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
||||||||| |||||||| ||||||||||||
Sbjct: 39 atgtgacactttatagtataacgaatctgga 69
>RF00906;MIR1122;AAAA02017131.1/7123-7250 39946:Oryza sativa Indica
Group
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AP004566.3/93541-93654 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 87 gttttttatgggacggagggagt 109
>RF00906;MIR1122;AAAA02035130.1/4826-4960 39946:Oryza sativa
Indica Group
Length = 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 57 gacacattatagtacaacgaatctgga 83
|||||||| ||||||||||||||||||
Sbjct: 89 gacacattctagtacaacgaatctgga 63
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 attcgtagtactaggatgtgtcgcatc 125
|||||||||||||||||||||| ||||
Sbjct: 88 attcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AP008209.1/34072110-34071977 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 107 gttttttatgggacggagggagt 129
>RF00906;MIR1122;AACV01012113.1/55186-55058 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 102 gttttttatgggacggagggagt 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
||||||||||| ||||||||||||||||||
Sbjct: 94 atgtgacacatcctagtacaacgaatctgga 64
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 91 atgtctacattcgtagtactaggatgtgtcgcatc 125
||||||| |||| ||||||||||||||||| ||||
Sbjct: 76 atgtctagattcttagtactaggatgtgtcacatc 42
>RF00906;MIR1122;EU337975.1/586-742 39946:Oryza sativa Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
||||||||| | |||||||||||||||||||
Sbjct: 115 atgtgacacttcatagtacaacgaatctgga 85
>RF00906;MIR1122;AACV01012603.1/10671-10517 39947:Oryza sativa
Japonica Group
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
|||||||||| |||||||||||||||||||
Sbjct: 44 atgtgacacaacatagtacaacgaatctgga 74
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggataga 87
||||||||||| |||||||| |||||||||||||
Sbjct: 43 atgtgacacatcctagtacaatgaatctggataga 77
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 99 attcgtagtactaggatgtgtcgcatc 125
|||||||||||||||||||||| ||||
Sbjct: 64 attcgtagtactaggatgtgtcacatc 38
>RF00906;MIR1122;AAAA02030479.1/4787-4952 39946:Oryza sativa Indica
Group
Length = 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 65 atagtacaacgaatctggataga 87
|||||||||||||||||||||||
Sbjct: 113 atagtacaacgaatctggataga 91
>RF00906;MIR1122;AACV01022113.1/70289-70455 39947:Oryza sativa
Japonica Group
Length = 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 65 atagtacaacgaatctggataga 87
|||||||||||||||||||||||
Sbjct: 114 atagtacaacgaatctggataga 92
>RF00906;MIR1122;AP003711.3/78857-78701 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 gacacattatagtacaacgaatctgga 83
||||| |||||||||||||||||||||
Sbjct: 47 gacactttatagtacaacgaatctgga 73
>RF00906;MIR1122;AACV01016857.1/872-736 39947:Oryza sativa Japonica
Group
Length = 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagt 132
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa Japonica
Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 attcgtagtactaggatgtgtcgcatc 125
|||||||||||||||||||||| ||||
Sbjct: 67 attcgtagtactaggatgtgtcacatc 93
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 attcgtagtactaggatgtgtcgcatc 125
|||||||||||||||||||||| ||||
Sbjct: 69 attcgtagtactaggatgtgtcccatc 95
>RF00906;MIR1122;AP002483.1/24463-24606 39947:Oryza sativa Japonica
Group
Length = 144
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 117 gttttttatgggacggagggagt 139
>RF00906;MIR1122;AC133007.4/76186-76053 39947:Oryza sativa Japonica
Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008217.1/3396232-3396120 39947:Oryza sativa
Japonica Group
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagt 108
>RF00906;MIR1122;AB206885.1/121-10 39947:Oryza sativa Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 85 gttttttatgggacggagggagt 107
>RF00906;MIR1122;AC120991.3/108993-108909 39947:Oryza sativa
Japonica Group
Length = 85
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 58 gttttttatgggacggagggagt 80
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
||||||||||| ||||||||||||||||||
Sbjct: 89 atgtgacacatcctagtacaacgaatctgga 59
>RF00906;MIR1122;AP008214.1/23959479-23959591 39947:Oryza sativa
Japonica Group
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagt 108
>RF00906;MIR1122;ABRL01000514.1/8970-9117 65489:Oryza barthii
Length = 148
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 91 atgtctacattcgtagtactaggatgtgtcgcatc 125
||||||| |||||||||||||||||| ||| ||||
Sbjct: 76 atgtctagattcgtagtactaggatgggtctcatc 42
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctgga 83
||||||||||| ||||||||||||||||||
Sbjct: 75 atgtgacacatcctagtacaacgaatctgga 45
>RF00906;MIR1122;AACV01016060.1/4048-4184 39947:Oryza sativa
Japonica Group
Length = 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 134 gttttttatgggacggagggagt 156
|||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagt 132
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 99 attcgtagtactaggatgtgtcgcatc 125
|||||||||||||||||||||| ||||
Sbjct: 68 attcgtagtactaggatgtgtcccatc 42
>RF00906;MIR1122;AP008213.1/14562972-14563105 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 atgtgacacattatagtacaacgaatctggatag 86
|||||||||||| |||||| |||||||| |||||
Sbjct: 90 atgtgacacattctagtactacgaatctagatag 57
>RF00906;MIR1122;AAAA02004369.1/19477-19347 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 92 tgtctacattcgtagtactaggatgt 117
|||||| |||||||||||||||||||
Sbjct: 72 tgtctagattcgtagtactaggatgt 47
>RF00906;MIR1122;AAAA02022804.1/34746-34633 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatagaaa-tatgtctacattcgtagtacta 111
|||||||||||| ||||||||| ||| |||||| ||| || || | |||||| |||||
Sbjct: 43 atgtgacacattctagtacaacaaatttggatataaagcatatccaaattcgttatacta 102
Query: 112 ggatgtgtcgcatc 125
||||||||| ||||
Sbjct: 103 ggatgtgtcacatc 116
>RF00906;MIR1122;AAAA02007310.1/1161-1273 39946:Oryza sativa Indica
Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AC092389.4/93429-93555 39947:Oryza sativa Japonica
Group
Length = 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 101 ttttttatgggacggagggagt 122
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 92 tgtctacattcgtagtactaggatgtgtcgcatc 125
|||||| |||||| ||||||||||||||| ||||
Sbjct: 41 tgtctagattcgttgtactaggatgtgtcacatc 74
>RF00906;MIR1122;AP008217.1/4273192-4273317 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 92 tgtctacattcgtagtactaggatgtgtcgcatc 125
|||| |||||||| ||||||||||||||| ||||
Sbjct: 73 tgtccacattcgttgtactaggatgtgtcccatc 106
>RF00906;MIR1122;AAAA02021800.1/3616-3483 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatag 86
|||||||||||| |||||| |||||||| |||||
Sbjct: 45 atgtgacacattctagtactacgaatctagatag 78
>RF00906;MIR1122;AP008211.1/18929382-18929520 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 99 attcgtagtactaggatgtgtcgcat 124
|||| |||||||||||||||||||||
Sbjct: 72 attcatagtactaggatgtgtcgcat 97
>RF00906;MIR1122;AAAA02003495.1/21560-21672 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 87 ttttttatgggacggagggagt 108
>RF00906;MIR1122;AP005416.3/143775-143639 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AAAA02012853.1/6255-6365 39946:Oryza sativa Indica
Group
Length = 111
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 135 ttttttatgggacggagggagt 156
||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagt 6
>RF00906;MIR1122;AP008209.1/29659053-29658899 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 66 tagtacaacgaatctggatagaaatatgtctacattcgtagtactaggat 115
|||||| ||||||||| | || | ||||||| |||||||||||||||||
Sbjct: 56 tagtactacgaatctgaacagggacatgtctagattcgtagtactaggat 105
>RF00906;MIR1122;AC148822.2/9529-9662 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 atgtgacacattatagtacaacgaatctggatag 86
|||||| |||| |||||||||||||||||||||
Sbjct: 43 atgtgaaacatcctagtacaacgaatctggatag 76
