miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 83 tgtccagattcattgtactaggatatgtcacatccacccaaaat 126
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 71.9 bits (36), Expect = 1e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 49 aacctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 79 aacctgtccagattcgaagtactaggatatgtcacatccacccaaaat 126
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 56 ccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 72 ccagattcatagtactaggatatatcacatccacccaaaat 32
>RF00906;MIR1122;AP008217.1/27843705-27843861 39947:Oryza sativa
Japonica Group
Length = 157
Score = 63.9 bits (32), Expect = 3e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 83 tgtccagattcatagtactagaatatgtcccatccacccaaaat 126
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| ||||||||||||| ||||||||
Sbjct: 77 cctgtccagattcgtagtactaggatacgtcacatc 42
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 63.9 bits (32), Expect = 3e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 83 tgtccagattgattgtactaggatatgtcacatccacccaaaat 126
>RF00906;MIR1122;AACV01019101.1/4942-4817 39947:Oryza sativa
Japonica Group
Length = 126
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtca 82
||||||||||||||||||||||||||||||||
Sbjct: 77 cctgtccagattcatagtactaggatatgtca 46
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 10 tggatgtgacacattctaacactacaaatctgtacagcgaacctgtccagattcatagta 69
|||||||||||||||||| || || |||||| ||| | ||||||||||||| | |||
Sbjct: 118 tggatgtgacacattctagtacaacgaatctggacataaagcctgtccagattcgttgta 59
Query: 70 ctaggatatgtcacatcaacccaaaat 96
|||||||| |||||||| | |||||||
Sbjct: 58 ctaggataagtcacatccaaccaaaat 32
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 54 gtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 70 gtccagattcgtagtactaggatgtgtcacatccacccaaaat 28
>RF00906;MIR1122;AAAA02027770.1/12261-12396 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||| ||||||||||||||||||||||
Sbjct: 61 ctgtccagattcgtagtactaggatatgtcacatc 95
>RF00906;MIR1122;AAAA02018547.1/31962-31829 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
||||| |||||||||||||||||||||||||||||
Sbjct: 59 ctgtctagattcatagtactaggatatgtcacatc 93
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 60.0 bits (30), Expect = 5e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||||| ||||||| |||||||||||| | |||||||
Sbjct: 77 cctgtccagattcatcgtactagaatatgtcacatccaaccaaaat 32
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||||||||||||||| |||||||
Sbjct: 83 tgtccagattcatagtactaggatatttcacatc 116
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 55 tccagattcatagtactaggatatgtcacat 85
||||||||||||||||||| |||||||||||
Sbjct: 73 tccagattcatagtactagaatatgtcacat 43
>RF00906;MIR1122;AAAA02032462.1/25561-25405 39946:Oryza sativa
Indica Group
Length = 157
Score = 60.0 bits (30), Expect = 5e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||| |||||| |||||||||||||||||||| | |||||||
Sbjct: 77 cctgtccatattcattgtactaggatatgtcacatccaaccaaaat 32
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa
Indica Group
Length = 161
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtca 82
||||||||||||||||||||||||||||||
Sbjct: 76 tgtccagattcatagtactaggatatgtca 47
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtca 82
|||||||||||| |||||||||||| |||||
Sbjct: 82 ctgtccagattcgtagtactaggatgtgtca 112
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 30 actacaaatctgtacagcgaacctgtccagattcatagtactaggatatgtcacatc 86
||||| |||||| |||| || ||||| |||||||||||||||| ||||||||||||
Sbjct: 98 actacgaatctggacagggagcctgtttagattcatagtactagaatatgtcacatc 42
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatat 78
||||||||||||| ||||||||||||||
Sbjct: 81 cctgtccagattcgtagtactaggatat 108
>RF00906;MIR1122;AP006753.2/60246-60378 39947:Oryza sativa
Japonica Group
Length = 133
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||||| || ||||||| ||||||||| |||||||||
Sbjct: 80 ctgtccagattcattgtgctaggatgtgtcacatccacccaaaat 36
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 50 acctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||| |||||||||||| |||||||||
Sbjct: 57 acctgtccagattcgtagtactaggatgtgtcacatc 93
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa
Japonica Group
Length = 157
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 30 actacaaatctgtacagcgaacctgtccagattcatagtactaggatatgtcacatc 86
||||| |||||| |||| || ||||| |||||||||||||||| ||||||||||||
Sbjct: 98 actacgaatctggacagggagcctgtttagattcatagtactagaatatgtcacatc 42
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatat 78
||||||||||||| ||||||||||||||
Sbjct: 81 cctgtccagattcgtagtactaggatat 108
>RF00906;MIR1122;AC231808.2/23061-22936 63629:Oryza minuta
Length = 126
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 agattcatagtactaggatatgtcacat 85
||||||||||||||||||||||||||||
Sbjct: 57 agattcatagtactaggatatgtcacat 84
>RF00906;MIR1122;AACV01018155.1/14353-14197 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 75 tgtccagattgattgtactaggatatgtcacatccactcaaaat 32
>RF00906;MIR1122;AAAA02021292.1/4370-4241 39946:Oryza sativa
Indica Group
Length = 130
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 57 cagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||||||||||| ||||||||| | |||||||
Sbjct: 60 cagattcatagtactaggatgtgtcacatccatccaaaat 99
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 50 acctgtccagattcatagtactaggatatgtc 81
|||||||||||||||| |||||||||||||||
Sbjct: 78 acctgtccagattcattgtactaggatatgtc 47
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 82 tgtccagattcattgtattaggatatgtcacatccaaccaaaat 125
>RF00906;MIR1122;AACV01009198.1/25225-25351 39947:Oryza sativa
Japonica Group
Length = 127
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 53 tgtccagattcattatactaggatgtgtcacatccacccaaaat 96
>RF00906;MIR1122;AP008213.1/6090564-6090409 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 8e-08
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 11 ggatgtgacacattctaacactacaaatctgtacagcgaacctgtccagattcatagtac 70
|||||||||| || ||| |||||||||||| |||| | ||| ||||||||| |||| |
Sbjct: 41 ggatgtgacatatcctatgactacaaatctggacag-gtgcctatccagattcgtagtcc 99
Query: 71 taggatatgtcacatc 86
||||||||||||||||
Sbjct: 100 taggatatgtcacatc 115
>RF00906;MIR1122;AP005098.4/61806-61935 39947:Oryza sativa
Japonica Group
Length = 130
Score = 56.0 bits (28), Expect = 8e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 57 cagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||||||||||| ||||||||| | |||||||
Sbjct: 71 cagattcatagtactaggatgtgtcacatccatccaaaat 32
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa Japonica
Group
Length = 156
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| ||| |||||||||||||||| | |||||||
Sbjct: 82 tgtccagattcattgtattaggatatgtcacatccaaccaaaat 125
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||||| |||||||||||| |||||| | |||||||
Sbjct: 77 cctgtccagattcattatactaggatatgccacatccaaccaaaat 32
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||| |||||||| ||||||||||||||||||| |||||||||
Sbjct: 75 tgtctagattcattatactaggatatgtcacatccacccaaaat 32
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 56.0 bits (28), Expect = 8e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 38 tgtccagattcatcgtattaggatgtgtcacatccacccaaaat 81
>RF00906;MIR1122;AAAA02016762.1/20933-20809 39946:Oryza sativa
Indica Group
Length = 125
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 65 tagtactaggatatgtcacatcaacccaaaat 96
|||||||||||||||||||||| |||||||||
Sbjct: 63 tagtactaggatatgtcacatccacccaaaat 32
>RF00906;MIR1122;ABRL01000294.1/23842-24000 65489:Oryza barthii
Length = 159
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||| ||||||| ||||||||||||
Sbjct: 76 ctgtccagattcatcgtactagaatatgtcacatc 42
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa Indica
Group
Length = 135
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 54 gtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 62 gtccagattcattgtactaggacgtgtcacatccacccaaaat 104
>RF00906;MIR1122;AACV01002208.1/17153-17286 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtc 81
||||||||||||| |||||||||||||||||
Sbjct: 77 cctgtccagattcgtagtactaggatatgtc 47
>RF00906;MIR1122;AAAA02028867.1/14372-14216 39946:Oryza sativa
Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtc 81
|||||| ||||||||||||||||||||||||
Sbjct: 81 cctgtctagattcatagtactaggatatgtc 111
>RF00906;MIR1122;AP004994.2/6845-6714 39947:Oryza sativa Japonica
Group
Length = 132
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 agtactaggatatgtcacatcaacccaaaat 96
||||||||||||||||||||| |||||||||
Sbjct: 58 agtactaggatatgtcacatccacccaaaat 28
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||||| |||||||||| |||||||| ||| |||||
Sbjct: 57 ctgtccagattcattgtactaggatgcgtcacatccacctaaaat 101
>RF00906;MIR1122;AC084282.6/35274-35430 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 56 ccagattcatagtactaggatatgtcacatc 86
|||||||||||||||||| ||||||||||||
Sbjct: 72 ccagattcatagtactagcatatgtcacatc 42
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
|||||||| |||| ||||| ||||||||||||||||
Sbjct: 81 cctgtccaaattcgtagtaataggatatgtcacatc 116
>RF00906;MIR1122;AL606691.4/149690-149555 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
||||| |||||||||||||||| ||||||||||||
Sbjct: 76 ctgtctagattcatagtactagaatatgtcacatc 42
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaa 94
|||||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 42 ctgtccagattcgttgtactaggatgtgtcacatccacccaaa 84
>RF00906;MIR1122;ABRL01002011.1/9416-9570 65489:Oryza barthii
Length = 155
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||| ||||||||| ||||||||||||
Sbjct: 76 ctgtccagattcgtagtactagaatatgtcacatc 42
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 56 ccagattcatagtactaggatatgtcacat 85
|||||||||| |||||||||||||||||||
Sbjct: 68 ccagattcattgtactaggatatgtcacat 97
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 56 ccagattcatagtactaggatatgtcacat 85
|||||||||| |||||||||||||||||||
Sbjct: 68 ccagattcattgtactaggatatgtcacat 97
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| |||||||||||| |||||||||
Sbjct: 81 tgtccagattcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa
Indica Group
Length = 149
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 58 agattcatagtactaggatatgtcacatcaacccaaaa 95
|||||| ||||||||||||||||| |||| ||||||||
Sbjct: 70 agattcgtagtactaggatatgtcccatccacccaaaa 33
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||||| |||||||| ||| |||||||| | |||||||
Sbjct: 77 cctgtccagattcaaagtactagaatacgtcacatccaaccaaaat 32
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 55 tccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||| |||||||||| ||||||||| ||| |||||
Sbjct: 73 tccagattcattgtactaggatgtgtcacatccacctaaaat 32
>RF00906;MIR1122;AC119290.2/13041-12931 39947:Oryza sativa Japonica
Group
Length = 111
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 55 tccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 62 tccagattcattgtaataggatgtgtcacatccacccaaaat 103
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| |||||||||||| |||||||||
Sbjct: 82 tgtccagattcgtagtactaggatgtgtcacatc 115
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||| ||||||||| |||||||||
Sbjct: 82 tgtccagattcataatactaggatgtgtcacatc 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| ||||||| |||||||||||
Sbjct: 75 tgtccagattcatcgtactagattatgtcacatc 42
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||||||||||| || |||||||||
Sbjct: 81 tgtccagattcatagtactagaatgtgtcacatc 114
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| |||||||||| |||||||||
Sbjct: 70 tgtccagattcattgtactaggatgtgtcacatc 103
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa
Japonica Group
Length = 131
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| | ||| |||||||||||||||| | |||||||
Sbjct: 77 cctgtccagattcgtcgtattaggatatgtcacatccaaccaaaat 32
>RF00906;MIR1122;AP008218.1/23548296-23548451 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||| ||||||||| |||||||||
Sbjct: 75 tgtccagattcataatactaggatgtgtcacatc 42
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| ||||||| |||||||||||
Sbjct: 82 tgtccagattcatcgtactagattatgtcacatc 115
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| |||||||||| |||||||||
Sbjct: 75 tgtccagattcatcgtactaggatgtgtcacatc 42
>RF00906;MIR1122;AACV01021484.1/7074-6919 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 5e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 30 actacaaatctgtacagcgaacctgtccagattcatagtactaggatatgtcacatc 86
||||| |||||| |||| | ||| ||||||||||||||||||||| ||||| ||||
Sbjct: 59 actacgaatctgaacaggcagcctatccagattcatagtactaggaaatgtcccatc 115
>RF00906;MIR1122;AAAA02021210.1/61042-60904 39946:Oryza sativa
Indica Group
Length = 139
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 gtccagattcatagtactaggatatgtcacatc 86
||||||||||||||||||||||| |||| ||||
Sbjct: 82 gtccagattcatagtactaggatgtgtcccatc 50
>RF00906;MIR1122;ABRL01001248.1/28987-28884 65489:Oryza barthii
Length = 104
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 68 tactaggatatgtcacatcaacccaaaat 96
||||||||||||||||||| |||||||||
Sbjct: 60 tactaggatatgtcacatccacccaaaat 32
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 68 tactaggatatgtcacatcaacccaaaat 96
||||||||||||||||||| |||||||||
Sbjct: 76 tactaggatatgtcacatccacccaaaat 104
>RF00906;MIR1122;AAAA02029450.1/6704-6860 39946:Oryza sativa Indica
Group
Length = 157
Score = 50.1 bits (25), Expect = 5e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 30 actacaaatctgtacagcgaacctgtccagattcatagtactaggatatgtcacatc 86
||||| |||||| |||| | ||| ||||||||||||||||||||| ||||| ||||
Sbjct: 60 actacgaatctgaacaggcagcctatccagattcatagtactaggaaatgtcccatc 116
>RF00906;MIR1122;AL845344.4/40945-41080 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 acctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||| ||||||||||| ||||| ||||
Sbjct: 77 acctgtccagattcgtagtactaggaaatgtcccatc 41
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||| | |||||||||| ||| ||||| |||||||||
Sbjct: 76 ctgtccagattcgttgtactaggatgtgttacatccacccaaaat 32
>RF00906;MIR1122;AP005912.3/116369-116237 39947:Oryza sativa
Japonica Group
Length = 133
Score = 50.1 bits (25), Expect = 5e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtacta-ggatatgtcacatcaacccaaaat 96
||||||| ||| |||||||| |||||||||||||| |||||||||
Sbjct: 76 tgtccaggttcgtagtactaaggatatgtcacatccacccaaaat 32
>RF00906;MIR1122;AP004754.3/31680-31527 39947:Oryza sativa Japonica
Group
Length = 154
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||| |||||||||| || |||||| ||||||||||||||||||
Sbjct: 79 ctgttcagattcataatattaggatgggtcacatcaacccaaaat 123
>RF00906;MIR1122;CT827956.1/52813-52688 4530:Oryza sativa (rice)
Length = 126
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 49 aacctgtccagattcatagtactaggatatgtc 81
||||||||||||||| ||||||||||| |||||
Sbjct: 74 aacctgtccagattcgtagtactaggaaatgtc 42
>RF00906;MIR1122;AP008211.1/6609928-6610066 39947:Oryza sativa
Japonica Group
Length = 139
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||||| ||||||||| ||| ||||| |||||||||
Sbjct: 64 ctgtccagattcatcatactaggatgtgttacatccacccaaaat 108
>RF00906;MIR1122;AC107206.4/43527-43372 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggata 77
|||||||||||||||||||||||||
Sbjct: 75 tgtccagattcatagtactaggata 51
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||| | ||||||||||||||||||| | |||||||
Sbjct: 80 ctgtccagattcgttatactaggatatgtcacatccaaccaaaat 124
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 acctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||| |||||||||||| |||| ||||
Sbjct: 78 acctgtccagattcgtagtactaggatgtgtcccatc 42
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||| ||||||||||||| ||||||| | |||||||
Sbjct: 88 ctgtccagattcgtagtactaggatacatcacatccaaccaaaat 132
>RF00906;MIR1122;AAAA02030634.1/11870-11745 39946:Oryza sativa
Indica Group
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggat 76
||||||||||||||||||||||||
Sbjct: 75 tgtccagattcatagtactaggat 52
>RF00906;MIR1122;AAAA02016710.1/2442-2572 39946:Oryza sativa
Indica Group
Length = 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| | ||||||||||||||| ||||
Sbjct: 55 cctgtccagattcgttgtactaggatatgtcccatc 90
>RF00906;MIR1122;AAAA02030593.1/3842-3702 39946:Oryza sativa
Indica Group
Length = 141
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 tccagattcatagtactaggatatgtcacatc 86
||||||||| ||||||||| ||||||||||||
Sbjct: 72 tccagattcgtagtactagtatatgtcacatc 41
>RF00906;MIR1122;AAAA02011838.1/7711-7833 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatcaacccaaa 94
|||||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 73 ctgtccagattcattgtactag--tatgtcacatccacccaaa 33
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| ||||||||| ||||||||| | |||||||
Sbjct: 83 tgtccagattcattatactaggatgtgtcacatccatccaaaat 126
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa
Japonica Group
Length = 133
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| ||||||||| ||||||||| |||| ||||
Sbjct: 75 tgtccagattcattgtactaggacgtgtcacatccaccccaaat 32
>RF00906;MIR1122;AP008215.1/7981718-7981570 39947:Oryza sativa
Japonica Group
Length = 149
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactagg 74
||||||||||||||||||||||||
Sbjct: 73 cctgtccagattcatagtactagg 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactag 73
||||||||||||||||||||||
Sbjct: 69 ctgtccagattcatagtactag 48
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
|||||| |||||| |||||||||||| |||||||||
Sbjct: 46 cctgtctagattcgtagtactaggatgtgtcacatc 81
>RF00906;MIR1122;AACV01012241.1/1523-1654 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||||||| |||||| |||||||||
Sbjct: 77 cctgtccagattcatagtcctaggaagtgtcacatc 42
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 tccagattcatagtactaggatatgtcacatc 86
||||||||| |||||||||||| |||||||||
Sbjct: 73 tccagattcgtagtactaggatgtgtcacatc 42
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 57 cagattcatagtactaggatatgtcacatc 86
||||||| |||||||||||| |||||||||
Sbjct: 85 cagattcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AP008216.1/2906565-2906717 39947:Oryza sativa
Japonica Group
Length = 153
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactagg 74
||||||||||||||||||||||||
Sbjct: 77 cctgtccagattcatagtactagg 54
>RF00906;MIR1122;AP004341.2/44463-44329 39947:Oryza sativa
Japonica Group
Length = 135
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| ||||||||||| ||||| ||||
Sbjct: 59 cctgtccagattcgtagtactaggaaatgtcccatc 94
>RF00906;MIR1122;AP008210.1/34377663-34377533 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| |||| |||||| ||||||||||
Sbjct: 77 cctgtccagattcgtagtcctaggaaatgtcacatc 42
>RF00906;MIR1122;AACV01014928.1/15280-15408 39947:Oryza sativa
Japonica Group
Length = 129
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 55 tccagattcatagtactaggatatgtcacatc 86
||||||||| ||||||||| ||||||||||||
Sbjct: 72 tccagattcgtagtactagaatatgtcacatc 41
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| |||||||||| | |||||||||
Sbjct: 47 cctgtccagattcgtagtactaggttgtgtcacatc 82
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||||| ||||||||| ||||||||| | |||||||
Sbjct: 83 tgtccagattcatcatactaggatgtgtcacatctaaccaaaat 126
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 51 cctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||| |||||| ||||||||||| ||||||| | |||||||
Sbjct: 77 cctgtccaaattcattgtactaggatacatcacatccaaccaaaat 32
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa
Indica Group
Length = 110
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtca 82
|||||||||||||| |||||||||| |||||
Sbjct: 35 ctgtccagattcattgtactaggatgtgtca 65
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
||||||| |||||| ||||||| ||||||||||||
Sbjct: 76 ctgtccatattcatcgtactagaatatgtcacatc 42
>RF00906;MIR1122;AAAA02017131.1/7123-7250 39946:Oryza sativa
Indica Group
Length = 128
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
||||||||||| |||||||| |||||||||||||
Sbjct: 76 ctgtccagatttgtagtactaagatatgtcacatc 42
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 agattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||| |||||| ||||||||| ||| |||||
Sbjct: 88 agattcatagtattaggatgtgtcacatccacctaaaat 126
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||| | |||||||||| |||||||||
Sbjct: 76 ctgtccagattcgttgtactaggatgtgtcacatc 42
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| | |||||||||| |||||||||
Sbjct: 82 tgtccagattcgttgtactaggatgtgtcacatc 115
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
||||| |||||| |||||||||||| |||||||||
Sbjct: 76 ctgtctagattcgtagtactaggatgtgtcacatc 42
>RF00906;MIR1122;ABRL01001744.1/6692-6848 65489:Oryza barthii
Length = 157
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 56 ccagattcatagtactaggatatgtca 82
|||||||||| ||||||||||||||||
Sbjct: 72 ccagattcattgtactaggatatgtca 46
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 54 gtccagattcatagtactaggatatgtcacatcaaccca 92
|||||||||||| ||| |||||| ||||||||| |||||
Sbjct: 74 gtccagattcattgtattaggatgtgtcacatctaccca 36
>RF00906;MIR1122;AACV01012113.1/55186-55058 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||| |||||||| ||| |||||||||
Sbjct: 77 ctgtccagattcgtagtactaagatgtgtcacatc 43
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||| | |||||||||| |||||||||
Sbjct: 61 ctgtccagattcgttgtactaggatgtgtcacatc 95
>RF00906;MIR1122;AAAA02016998.1/2818-2950 39946:Oryza sativa
Indica Group
Length = 133
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtc 81
|||||| |||||| |||||||||||||||||
Sbjct: 57 cctgtctagattcgtagtactaggatatgtc 87
>RF00906;MIR1122;AL713933.6/72988-73123 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||| ||||||||||| ||||| ||||
Sbjct: 76 ctgtccagattcgtagtactaggaaatgtcccatc 42
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
|||||||||||| |||||||||||| |||| ||||
Sbjct: 61 ctgtccagattcgtagtactaggatgtgtcccatc 95
>RF00906;MIR1122;AP008213.1/24848104-24848218 39947:Oryza sativa
Japonica Group
Length = 115
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 66 agtactaggatatgtcacatcaacccaaaat 96
||||||||||||||||||||| | |||||||
Sbjct: 62 agtactaggatatgtcacatccaaccaaaat 32
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 ctgtccagattcatagtactaggatatgtcacatc 86
||||||| | ||||||||||| |||||||||||||
Sbjct: 76 ctgtccatactcatagtactaagatatgtcacatc 42
>RF00906;MIR1122;AAAA02018804.1/15100-15261 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||||||||| ||||||||||||||| ||||||
Sbjct: 75 tgtccagatttgtagtactaggatatgccacatc 42
>RF00906;MIR1122;ABRL01002360.1/2061-1952 65489:Oryza barthii
Length = 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 67 gtactaggatatgtcacatcaacccaaaat 96
||||||||||||||||||| |||||||||
Sbjct: 61 gtactaggatatgtcacatttacccaaaat 32
>RF00906;MIR1122;AP008208.1/277556-277420 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| |||| | |||||||||||||
Sbjct: 71 tgtccagattcattgtacaaagatatgtcacatc 38
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1 gattctagatggatgtgacacattctaacactacaaatctgtacag 46
|||| |||||||||||||| ||| ||| |||||||||||| ||||
Sbjct: 31 gattttagatggatgtgacgcatcctagtactacaaatctggacag 76
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 55 tccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||| ||| ||||||||||||| ||| |||| |||||||||
Sbjct: 84 tccaggttcgtagtactaggatacgtcccatccacccaaaat 125
>RF00906;MIR1122;AP002816.1/33080-32947 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tccagattcatagtactaggat 76
||||||||||||||||||||||
Sbjct: 64 tccagattcatagtactaggat 85
>RF00906;MIR1122;AP008210.1/27089317-27089424 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 55 tccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||| || ||||||| || |||||| |||||||||
Sbjct: 58 tccagattcattgtgctaggatgtggcacatccacccaaaat 99
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa
Japonica Group
Length = 161
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||| |||||||||||||||||||| |||||||
Sbjct: 79 tgtcgagattcatagtactaggatacatcacatc 46
>RF00906;MIR1122;CR855202.1/27481-27587 4530:Oryza sativa (rice)
Length = 107
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 55 tccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||| || ||||||| || |||||| |||||||||
Sbjct: 51 tccagattcattgtgctaggatgtggcacatccacccaaaat 10
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 55 tccagattcatagtactaggatatgtcacatcaacccaaaat 96
||||||||||| || ||||||| || |||||| |||||||||
Sbjct: 57 tccagattcattgtgctaggatgtggcacatccacccaaaat 98
>RF00906;MIR1122;AAAA02021026.1/44639-44772 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 65 tagtactaggatatgtcacatcaacccaaa 94
|||||||||||| ||||||||| |||||||
Sbjct: 73 tagtactaggatgtgtcacatccacccaaa 102
>RF00906;MIR1122;AAAA02022617.1/29987-30140 39946:Oryza sativa
Indica Group
Length = 154
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| | ||||||||||| ||||||||
Sbjct: 74 tgtccagattcgttgtactaggatacgtcacatc 41
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||| ||||| |||||||||||| |||||||||
Sbjct: 81 tgtcccgattcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AC136522.3/138087-137951 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| ||||||||||||| ||| ||||
Sbjct: 63 tgtccagattcgtagtactaggatacgtcccatc 96
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| |||| ||||||| |||||||||
Sbjct: 82 tgtccagattcgtagtcctaggatgtgtcacatc 115
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||||||| || ||| |||||||||
Sbjct: 70 tgtccagattcatagtattatgatgtgtcacatc 103
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1 gattctagatggatgtgacacattctaacactacaaatctgtacag 46
|||| |||||||||||||| ||| ||| |||||||||||| ||||
Sbjct: 31 gattttagatggatgtgacgcatcctagtactacaaatctggacag 76
>RF00906;MIR1122;AAAA02001059.1/2381-2513 39946:Oryza sativa
Indica Group
Length = 133
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 57 cagattcatagtactaggatatgtcacatc 86
||||||| |||| |||||||||||||||||
Sbjct: 71 cagattcgtagttctaggatatgtcacatc 42
>RF00906;MIR1122;AP003246.3/163487-163335 39947:Oryza sativa
Japonica Group
Length = 153
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggat 76
||||||||||||| ||||||||||||
Sbjct: 81 cctgtccagattcgtagtactaggat 106
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||| |||||| |||||||||||| |||||||||
Sbjct: 75 tgtctagattcttagtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02026539.1/31268-31114 39946:Oryza sativa
Indica Group
Length = 155
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtc 81
|||||||||||| |||| ||||||||||||
Sbjct: 80 ctgtccagattcgtagtcctaggatatgtc 109
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| ||||||||| ||| ||||||||
Sbjct: 75 tgtccagattcgtagtactagaatacgtcacatc 42
>RF00906;MIR1122;AP008218.1/22612628-22612742 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 59 gattcatagtactaggatatgtcacatcaacccaaaat 96
||||||| |||||||||||||| | ||| |||||||||
Sbjct: 69 gattcatcgtactaggatatgttatatccacccaaaat 32
>RF00906;MIR1122;AACV01008143.1/21832-21975 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 ggatgtgacacattctaacactacaaatctgtacagcg 48
||||||||||||| ||||||| || |||||| ||||||
Sbjct: 104 ggatgtgacacatcctaacacgacgaatctggacagcg 67
>RF00906;MIR1122;AACV01001940.1/8575-8731 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactag 73
||||||||||||||||||||||
Sbjct: 82 ctgtccagattcatagtactag 103
>RF00906;MIR1122;AACV01022450.1/23564-23424 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tagtactaggatatgtcacatc 86
||||||||||||||||||||||
Sbjct: 79 tagtactaggatatgtcacatc 100
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 52 ctgtccagattcatagtactaggatatgtcacat 85
||||||||||||||||| |||||| ||||||||
Sbjct: 49 ctgtccagattcatagtcttaggatgtgtcacat 82
>RF00906;MIR1122;CR855052.1/5895-5769 4530:Oryza sativa (rice)
Length = 127
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| ||||||| |||||||||||
Sbjct: 58 tgtccagattcattgtactagattatgtcacatc 91
>RF00906;MIR1122;AAAA02024971.1/2546-2390 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| ||||| ||||||| ||||||||
Sbjct: 83 tgtccagattcgtagtattaggatacgtcacatc 116
>RF00906;MIR1122;AC130604.4/103163-103007 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 57 cagattcatagtactaggatatgtcacatc 86
|||||||||||||||||| | |||||||||
Sbjct: 87 cagattcatagtactaggttgtgtcacatc 116
>RF00906;MIR1122;AL837527.2/76529-76400 4530:Oryza sativa (rice)
Length = 130
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 51 cctgtccagattcatagtactaggatatgtcacatcaacccaaaat 96
|||||||||||| |||||||||||| |||| |||| | |||||||
Sbjct: 54 cctgtccagattggtagtactaggatgtgtctcatccaaccaaaat 99
>RF00906;MIR1122;AACV01003164.1/19294-19158 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||||| |||| | |||||||||||||
Sbjct: 67 tgtccagattcattgtacaaagatatgtcacatc 100
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||||||||||||||||||| || |||||||||
Sbjct: 42 tgtccagattcatagtactaaaatgtgtcacatc 75
>RF00906;MIR1122;AAAA02023225.1/29655-29800 39946:Oryza sativa
Indica Group
Length = 146
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 67 gtactaggatatgtcacatcaacccaaaat 96
|||||||||||||||||||| | |||||||
Sbjct: 87 gtactaggatatgtcacatctaaccaaaat 116
>RF00906;MIR1122;AP004012.3/83493-83639 39947:Oryza sativa
Japonica Group
Length = 147
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtca 82
|||||| ||||||||||||||||| |||||
Sbjct: 55 tgtccatattcatagtactaggatgtgtca 84
>RF00906;MIR1122;AACV01016060.1/4048-4184 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatat 78
||||||||||||||||||||| ||||
Sbjct: 75 tgtccagattcatagtactagaatat 50
>RF00906;MIR1122;AL663000.4/107766-107906 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
|||| |||||| |||| |||||||||||||||||
Sbjct: 75 tgtctagattcgtagtcctaggatatgtcacatc 42
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| ||||| |||||| |||||||||
Sbjct: 68 tgtccagattcgtagtaataggatgtgtcacatc 101
>RF00906;MIR1122;CR855160.1/7113-7006 4530:Oryza sativa (rice)
Length = 108
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 tgtccagattcatagtactaggatatgtcacatc 86
||||||||||| ||||||||||||| ||| ||||
Sbjct: 75 tgtccagattcgtagtactaggatacgtcccatc 42
