miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 155 bits (78), Expect = 1e-37
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 23 aaaaacgaatctaggacgggatgtgacacattctagtacaacgaatctggacagaggtat 82
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
||||||||||||| ||||||||||||| ||||| |||| |||||||
Sbjct: 83 gtccagattcgtagtactaggatgtgtcacatccagtactaggttg 128
Score = 58.0 bits (29), Expect = 3e-08
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||| || |||| || ||||||||||||| |||||| | ||||||||||| | | |
Sbjct: 134 aaaaaccaacctagtactggatgtgacacatcctagtactacgaatctggacatacctct 75
Query: 61 gtccagattcgtaatactaggatgtgttacatc 93
|||||||||||| |||||| |||||| |||||
Sbjct: 74 gtccagattcgttgtactagaatgtgtcacatc 42
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 107 bits (54), Expect = 3e-23
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||||||||||| ||||||| ||||| ||| ||||| ||| |||||||||||| ||||
Sbjct: 22 aaaaacgaatctagaacgggatttgacatattctagtataataaatctggacaaatgtat 81
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
|||||||||| || |||||| |||||| ||||| |||||||||||
Sbjct: 82 gtccagattcatagtactagaatgtgtcacatccggtattaggttg 127
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
|||||||||||||| |||||| |||||||||||||
Sbjct: 115 ggatgtgacacattctagtactatgaatctggaca 81
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 99.6 bits (50), Expect = 7e-21
Identities = 92/106 (86%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
||||||||||||| || ||||||||| | | |||||| ||||||||||||| | ||||
Sbjct: 23 aaaaacgaatctaatactagatgtgacataatctagtacgatgaatctggacatatgtat 82
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
|||||||||| |||||||||||||||| |||||| ||| |||||||
Sbjct: 83 gtccagattcataatactaggatgtgtcacatctggtactaggttg 128
Score = 54.0 bits (27), Expect = 4e-07
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 20 gatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatacta 79
|||||||||||| ||||| ||||||||||||| | ||||||||||||| | |||||
Sbjct: 115 gatgtgacacatcctagtattatgaatctggacatacatatgtccagattcatcgtacta 56
Query: 80 ggatgtgttacatctagtattag 102
| | ||| ||||||||||||||
Sbjct: 55 gattatgtcacatctagtattag 33
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 97.6 bits (49), Expect = 3e-20
Identities = 82/93 (88%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
||||||||||||||||| |||||||||| ||| |||||| |||||| |||| | | |||
Sbjct: 22 aaaaacgaatctaggaccggatgtgacatattctagtacgatgaatttggatatatatat 81
Query: 61 gtccagattcgtaatactaggatgtgttacatc 93
||||||||||||| ||||||||||||| |||||
Sbjct: 82 gtccagattcgtagtactaggatgtgtcacatc 114
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 91.7 bits (46), Expect = 2e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||| ||||||| || |||||||||| ||| ||||| |||||||||||| | || |||
Sbjct: 23 aaaaacaaatctagtaccggatgtgacatattctagtataatgaatctggatagagatat 82
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattaggttgattt 110
||||||||||||| | ||||||||||| ||||| ||| ||||||||||
Sbjct: 83 gtccagattcgtagtcctaggatgtgtcacatccggtacgaggttgattt 132
>RF00906;MIR1122;AP008218.1/23548296-23548451 39947:Oryza sativa
Japonica Group
Length = 156
Score = 91.7 bits (46), Expect = 2e-18
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
||||||||||||| || ||||||||| | | |||||| ||||||||||||| | ||||
Sbjct: 134 aaaaacgaatctaatactagatgtgacataatctagtacgatgaatctggacatatgtat 75
Query: 61 gtccagattcgtaatactaggatgtgttacatct 94
|||||||||| |||||||||||||||| ||||||
Sbjct: 74 gtccagattcataatactaggatgtgtcacatct 41
Score = 60.0 bits (30), Expect = 6e-09
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||| ||||||| || |||||||||||| ||||| ||||||||||||| | |||
Sbjct: 23 aaaaaccaatctagtaccagatgtgacacatcctagtattatgaatctggacatacatat 82
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattag 102
|||||||||| | |||||| | ||| ||||||||||||||
Sbjct: 83 gtccagattcatcgtactagattatgtcacatctagtattag 124
>RF00906;MIR1122;ABRL01000294.1/23842-24000 65489:Oryza barthii
Length = 159
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||||||||||| || |||||||||| ||| |||||| ||||||||||||| | ||||
Sbjct: 23 aaaaacgaatctagaactggatgtgacatattctagtacgatgaatctggacagatgtat 82
Query: 61 gtccagattcgtaatactaggatgtgt 87
| |||||||||| |||||| ||||||
Sbjct: 83 gctcagattcgtagtactagaatgtgt 109
>RF00906;MIR1122;AC128646.5/47101-47248 39947:Oryza sativa
Japonica Group
Length = 148
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 4 aacgaatctaggacgggatgtgacacattatagtacaatgaatctggac 52
|||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct: 25 aacgaatctatgacgggatgtgacacattctagtacaataaatctggac 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
|||||||||||||| ||||||||| ||||| ||||
Sbjct: 108 ggatgtgacacattctagtacaataaatctagaca 74
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 18 gggatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatac 77
|||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||
Sbjct: 117 gggatgtgacacatcctagtacaacgaatctggacaaattactgtccagattcgttgtac 58
Query: 78 taggatgtgttacatc 93
|||||||||| |||||
Sbjct: 57 taggatgtgtcacatc 42
Score = 63.9 bits (32), Expect = 4e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 18 gggatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatac 77
|||||||||||||| |||||||| ||||||||||| | ||||||||||||| |||
Sbjct: 40 gggatgtgacacatcctagtacaacgaatctggacagtaatttgtccagattcgttgtac 99
Query: 78 taggatgtgttacatc 93
|||||||||| |||||
Sbjct: 100 taggatgtgtcacatc 115
>RF00906;MIR1122;AP008209.1/34072110-34071977 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctg 49
||||||||||||||||| |||||||||| | ||||||||||| ||||||
Sbjct: 112 aaaaacgaatctaggaccggatgtgacatactatagtacaataaatctg 64
>RF00906;MIR1122;AC133007.4/76186-76053 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctg 49
||||||||||||||||| |||||||||| | ||||||||||| ||||||
Sbjct: 23 aaaaacgaatctaggaccggatgtgacatactatagtacaataaatctg 71
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatact 78
||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||| ||||
Sbjct: 41 ggatgggacacattctagtacaacgaatctggacaggggtatatccagattcgttgtact 100
Query: 79 aggatgtgt 87
|||| ||||
Sbjct: 101 aggaagtgt 109
>RF00906;MIR1122;ABRL01002011.1/9416-9570 65489:Oryza barthii
Length = 155
Score = 65.9 bits (33), Expect = 1e-10
Identities = 79/93 (84%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||| || |||||| |||||||||| ||| |||||| | ||||||||||| ||| |
Sbjct: 23 aaaaacaaacctaggataggatgtgacatattctagtactacgaatctggacagaggatt 82
Query: 61 gtccagattcgtaatactaggatgtgttacatc 93
||||||||||||| |||| |||||||| |||||
Sbjct: 83 gtccagattcgtagtact-ggatgtgtcacatc 114
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 63.9 bits (32), Expect = 4e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaaag-gtatgtccagattcgtaatac 77
||||||||||||| | ||| |||||||||||||| | |||||||||||||| | ||||
Sbjct: 41 ggatgtgacacatcttggtataatgaatctggacataccgtatgtccagattcattatac 100
Query: 78 taggatgtgttacatc 93
|||||||||| |||||
Sbjct: 101 taggatgtgtcacatc 116
Score = 63.9 bits (32), Expect = 4e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca-aaggtatgtccagattcgtaatac 77
||||||||||||| ||||| |||||||||||||| | ||||||||||||||| | ||||
Sbjct: 117 ggatgtgacacatcctagtataatgaatctggacatacggtatgtccagattcattatac 58
Query: 78 taggatgtgttacatc 93
| ||||||| |||||
Sbjct: 57 caagatgtgtcacatc 42
>RF00906;MIR1122;AAAA02031907.1/29073-28940 39946:Oryza sativa
Indica Group
Length = 134
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatct 48
||||||||||||||||| |||||||||| ||| |||||| ||||||||
Sbjct: 23 aaaaacgaatctaggaccggatgtgacatattctagtacgatgaatct 70
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 89/107 (83%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggt-a 59
||||| |||||||| || | |||||||| ||| |||||| ||||||||||| | | | |
Sbjct: 23 aaaaaagaatctagtaccgtatgtgacatattctagtactatgaatctggatatacatta 82
Query: 60 tgtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
||||||||||| || ||||||||| | | |||||||||| |||||||
Sbjct: 83 tgtccagattcatagtactaggatatttcacatctagtactaggttg 129
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 61.9 bits (31), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
||||||||||||| ||| ||||||||||||| |||||| | ||||||| | || |
Sbjct: 133 aaaaacgaatctaagactggatgtgacacatcctagtactacgaatctgc-cgaatctgc 75
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattagg 103
|||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 74 ctccagattcgtagtactaggatgtgtcacatccagtattagg 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 64 cagattcgtaatactaggatgtgttacatctagtattag 102
|||||||||| ||||||||||||| ||||| ||| ||||
Sbjct: 85 cagattcgtagtactaggatgtgtcacatccagtcttag 123
>RF00906;MIR1122;AAAA02003006.1/3399-3554 39946:Oryza sativa Indica
Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||| || |||| || ||||||||||||| || ||| | ||||||| ||| ||||||
Sbjct: 134 aaaaaccaacctagtaccggatgtgacacatcctaatactacgaatctgaacacaggtat 75
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattaggttgatttc 111
||| ||||| ||| | ||| ||||||| |||||| ||| ||||||| ||||
Sbjct: 74 gtctagatttgtagttctaagatgtgtcacatctggtactaggttgttttc 24
>RF00906;MIR1122;AACV01014928.1/15280-15408 39947:Oryza sativa
Japonica Group
Length = 129
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctgga 51
||||||||||||||||| |||||||||| ||| |||||| | |||||||||
Sbjct: 22 aaaaacgaatctaggaccggatgtgacatattctagtactacgaatctgga 72
>RF00906;MIR1122;AP004636.3/36389-36234 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 11 ctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtatgtccagatt 69
|||||| ||||||||||| || |||||||| ||||||||||||||| ||||||||||
Sbjct: 33 ctaggaagggatgtgacattttctagtacaacgaatctggacaaaggactgtccagatt 91
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||||||||||||||| |||||||||||
Sbjct: 117 ggatgtgacacattatagtacaacgaatctggaca 83
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 60.0 bits (30), Expect = 6e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggt 58
||||||||||||||||| ||||||||||||| |||||| | |||||| |||| ||||
Sbjct: 23 aaaaacgaatctaggaccggatgtgacacatcctagtactacgaatctagacagaggt 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
|||| ||||||||| ||||||||||||| |||||
Sbjct: 75 tgtctagattcgtagtactaggatgtgtcacatc 42
>RF00906;MIR1122;AP008210.1/21918444-21918599 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 6e-09
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
||||||||||||| ||| |||| ||||| ||| ||||| | ||||||||||| | ||||
Sbjct: 23 aaaaacgaatctatgaccggatatgacatattctagtattacgaatctggacatatgtat 82
Query: 61 gtccagattcgtaatactaggatgtgttacatct 94
|| |||||| || |||||| |||||| ||||||
Sbjct: 83 atctagattcatagtactagtatgtgtcacatct 116
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 20 gatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatacta 79
|||||||||||| |||||| |||||||| || | | ||||||||||||||||||||||
Sbjct: 115 gatgtgacacatactagtactatgaatctagatatacatatgtccagattcgtaatacta 56
Query: 80 g 80
|
Sbjct: 55 g 55
>RF00906;MIR1122;AAAA02020879.1/5788-5634 39946:Oryza sativa Indica
Group
Length = 155
Score = 60.0 bits (30), Expect = 6e-09
Identities = 88/106 (83%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
||||||||||||| || ||||||||||||| || ||||||||||||||| | | |||
Sbjct: 23 aaaaacgaatctaagattagatgtgacacattcta-tacaatgaatctggatagatatat 81
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
|||||||||| || || ||| |||||| ||| ||| || |||||||
Sbjct: 82 gtccagattcatagtattagaatgtgtcacaactattactaggttg 127
>RF00906;MIR1122;AP008209.1/30325748-30325904 39947:Oryza sativa
Japonica Group
Length = 157
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 8 aatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
||||||| || ||||||||||| | |||||||||||||||||||||
Sbjct: 128 aatctagtaccggatgtgacacttcatagtacaatgaatctggaca 83
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 60.0 bits (30), Expect = 6e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca-aaggtatgtccagattcgtaatac 77
|||||||||||||| |||||||| ||||||||||| || | ||||||||||||| |||
Sbjct: 117 ggatgtgacacattctagtacaacgaatctggacataaagcctgtccagattcgttgtac 58
Query: 78 taggat 83
||||||
Sbjct: 57 taggat 52
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 60.0 bits (30), Expect = 6e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaaagg-tatgtccagattcgtaatac 77
||||| ||||||| ||||||| | ||||||||||| || | |||||||||||||| |||
Sbjct: 20 ggatgggacacatcatagtactacaaatctggacaaggggtctgtccagattcgtagtac 79
Query: 78 taggatgtgt 87
||||||||||
Sbjct: 80 taggatgtgt 89
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 34 tagtacaatgaatctggacaaaggtatgtccagattcgtaatactaggatgtgt 87
|||||| ||||||||||||| | | |||||||||||||| |||||||||||||
Sbjct: 57 tagtactatgaatctggacatatatctgtccagattcgtagtactaggatgtgt 110
Score = 48.1 bits (24), Expect = 2e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 24 tgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatactaggat 83
|||||||| |||||| | ||||||||||| | ||||||||||||| || |||||||||
Sbjct: 112 tgacacatcctagtactacgaatctggacagatatatgtccagattcatagtactaggat 53
>RF00906;MIR1122;AAAA02005552.1/15961-15806 39946:Oryza sativa
Indica Group
Length = 156
Score = 58.0 bits (29), Expect = 3e-08
Identities = 77/93 (82%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||||||||||| || |||| |||| ||| || ||| || |||||||||||| ||||
Sbjct: 23 aaaaacgaatctagtaccggatacgacatattctaatactataaatctggacaaatgtat 82
Query: 61 gtccagattcgtaatactaggatgtgttacatc 93
|| ||||||| | || |||||||||| |||||
Sbjct: 83 gttcagattcacagtattaggatgtgtcacatc 115
>RF00906;MIR1122;AACV01012113.1/55186-55058 39947:Oryza sativa
Japonica Group
Length = 129
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
|||||| ||||||| |||||||||||||||| |||||| | |||||||||||
Sbjct: 24 aaaaacaaatctagtacgggatgtgacacatcttagtactacgaatctggaca 76
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
|||||||||||||| ||||| ||||||| |||||
Sbjct: 76 tgtccagattcgtagtactaagatgtgtcacatc 43
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
|||||| || |||| || |||||||||||||| |||||| |||||||||||||
Sbjct: 94 aaaaaccaacctagtaccggatgtgacacattttagtactatgaatctggaca 42
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaa 54
||||||||||| ||||||||||| ||||||||||||
Sbjct: 117 ggatgtgacactttatagtacaacgaatctggacaa 82
>RF00906;MIR1122;AAAA02012907.1/4650-4807 39946:Oryza sativa Indica
Group
Length = 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaaa-ggtatgtccagattcgtaatac 77
||||||||||||| ||| |||||||||||| ||| | ||| |||||||||| | ||||
Sbjct: 118 ggatgtgacacatcctagcacaatgaatctgtacagacggtccgtccagattcattatac 59
Query: 78 taggatgtgttacatc 93
|||||||||| |||||
Sbjct: 58 taggatgtgtcacatc 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggac 52
||||||||||||| ||||| |||||||||||||
Sbjct: 42 ggatgtgacacatcctagtataatgaatctggac 75
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 1e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca-aaggtatgtccagatt 69
||||||||||||| |||||||||| |||||||||| | |||||||||||||
Sbjct: 41 ggatgtgacacatgatagtacaataaatctggacataccgtatgtccagatt 92
Score = 48.1 bits (24), Expect = 2e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaaa-ggtatgtccagatt 69
|||||||||| || ||||||||| |||||||||| | ||||||||||||||
Sbjct: 117 ggatgtgacatatcctagtacaatcaatctggacatacggtatgtccagatt 66
>RF00906;MIR1122;AACV01013085.1/19238-19395 39947:Oryza sativa
Japonica Group
Length = 158
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 11 ctaggacgggatgtgacacattatagtacaatgaatctg 49
||||||| |||| |||||| |||||||||||||||||||
Sbjct: 126 ctaggaccggatatgacactttatagtacaatgaatctg 88
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa Indica
Group
Length = 136
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatctagtattag 102
||||||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 62 tgtccagattcgttgtactaggatgtgtcacatccagtattag 104
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
|||||| |||||| || ||||||||||||| |||||||| |||||||||||
Sbjct: 114 aaaaaccaatctaatactggatgtgacacatcctagtacaacgaatctggaca 62
>RF00906;MIR1122;EU337975.1/586-742 39946:Oryza sativa Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 ctaggacgggatgtgacacattatagtacaatgaatctggaca 53
||||||| ||||||||||| | ||||||||| |||||||||||
Sbjct: 125 ctaggaccggatgtgacacttcatagtacaacgaatctggaca 83
>RF00906;MIR1122;AACV01013846.1/34700-34544 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||| ||||||||||| |||||||||||
Sbjct: 41 ggatgtgacactttatagtacaacgaatctggaca 75
>RF00906;MIR1122;AAAA02027770.1/12261-12396 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
|||||||||||||| ||||||||| ||| ||||| |||| |||||||
Sbjct: 62 tgtccagattcgtagtactaggatatgtcacatccagtactaggttg 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgac 27
||||||||||||||||| |||||||||
Sbjct: 23 aaaaacgaatctaggactggatgtgac 49
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| ||||||||||||||||||||
Sbjct: 104 ggatgtgacacatcctagtacaatgaatctggaca 70
>RF00906;MIR1122;AAAA02005311.1/24621-24777 39946:Oryza sativa
Indica Group
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 8 aatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
||||||| || |||| |||||| | |||||||||||||||||||||
Sbjct: 128 aatctagtaccggatatgacacttcatagtacaatgaatctggaca 83
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
||||||||||||| |||||||||||||||||||
Sbjct: 75 tgtccagattcgttgtactaggatgtgttacatc 42
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
|||||||||||||| ||||||||||||| |||||
Sbjct: 60 tgtccagattcgtagtactaggatgtgtcacatc 93
>RF00906;MIR1122;AP008211.1/6609928-6610066 39947:Oryza sativa
Japonica Group
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
||||||||||| | ||||||||||||||||||||
Sbjct: 65 tgtccagattcatcatactaggatgtgttacatc 98
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 tatgtccagattcgtaatactaggatgtgttacatcta 95
||||||||||||| | |||||||||||||| |||||||
Sbjct: 81 tatgtccagattcatcatactaggatgtgtcacatcta 118
>RF00906;MIR1122;AACV01003486.1/94-250 39947:Oryza sativa Japonica
Group
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 8 aatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
||||||| || |||| |||||| | |||||||||||||||||||||
Sbjct: 30 aatctagtaccggatatgacacttcatagtacaatgaatctggaca 75
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 16 acgggatgtgacacattatagtacaatgaatctggaca 53
|||||||||||||||| |||||| |||||||||||||
Sbjct: 38 acgggatgtgacacatcctagtacgatgaatctggaca 75
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 20 gatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| ||||||||||||||| ||||
Sbjct: 116 gatgtgacacattctagtacaatgaatctagaca 83
>RF00906;MIR1122;AP008214.1/666276-666163 39947:Oryza sativa
Japonica Group
Length = 114
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaa 41
|||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 23 aaaaacgaatctaggattggatctgacacattctagtacaa 63
>RF00906;MIR1122;AP004566.3/93541-93654 39947:Oryza sativa
Japonica Group
Length = 114
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaa 41
|||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 92 aaaaacgaatctaggattggatctgacacattctagtacaa 52
>RF00906;MIR1122;AC217582.2/26328-26173 4537:Oryza punctata
Length = 156
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
|||||| || |||||||||||||||| || ||||||||||||||||||||
Sbjct: 23 aaaaaccaacctaggacgggatgtgatgttttctagtacaatgaatctggaca 75
>RF00906;MIR1122;AACV01015388.1/34183-34313 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 20 gatgtgacacattatagtacaatgaatctggac 52
|||||||||||| ||||| ||||||||||||||
Sbjct: 42 gatgtgacacatcatagtgcaatgaatctggac 74
>RF00906;MIR1122;AAAA02032515.1/3115-3271 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 21 atgtgacacattatagtacaatgaatctggaca 53
||||||||| ||||| |||||||||||||||||
Sbjct: 43 atgtgacactttataatacaatgaatctggaca 75
>RF00906;MIR1122;AP006460.4/47395-47544 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 41 atgaatctggaca-aaggtatgtccagattcgtaatactaggatg 84
||||||||||||| ||||||| |||||||||||| | ||||||||
Sbjct: 93 atgaatctggacataaggtatatccagattcgtagtcctaggatg 49
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctgga 51
||||||||||||| ||||||||||||||||||
Sbjct: 41 ggatgtgacacatcctagtacaatgaatctgga 73
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 61 gtccagattcgtaatactaggatgtgttacatc 93
||||||||||||| ||||||||||||| |||||
Sbjct: 70 gtccagattcgtagtactaggatgtgtcacatc 38
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 58 tatgtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
||||||||||||||| || |||||||||| ||||||||| |||||||
Sbjct: 56 tatgtccagattcgttgtaataggatgtgtcacatctagtcctaggttg 104
>RF00906;MIR1122;AAAA02032462.1/25561-25405 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 61 gtccagattcgtaatactaggatgtgttacatc 93
|||||||||||| |||||||||||||| |||||
Sbjct: 84 gtccagattcgttatactaggatgtgtcacatc 116
>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa
Japonica Group
Length = 161
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 atgtccagattcgtaatactaggatgtgt 87
||||||||||||||||||||||| |||||
Sbjct: 77 atgtccagattcgtaatactaggttgtgt 49
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 58 tatgtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
|||||||||||||||| || |||||||||| ||||| ||| |||||||
Sbjct: 66 tatgtccagattcgtagtaataggatgtgtcacatccggtactaggttg 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtac 39
||||| ||||||||||| |||||||||| ||| ||||||
Sbjct: 23 aaaaatgaatctaggaccggatgtgacatattctagtac 61
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca-aaggtatgtccagattcgtaatac 77
|||||||||||||| || |||||| ||| |||||| | |||||||||||||| | |||
Sbjct: 41 ggatgtgacacattctaatacaataaatttggacagaccgtatgtccagattcattgtac 100
Query: 78 taggatgtgttacatc 93
|||||| ||| |||||
Sbjct: 101 taggatatgtcacatc 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
|||||||||| || ||||||||||||||||||||
Sbjct: 117 ggatgtgacatatcctagtacaatgaatctggaca 83
>RF00906;MIR1122;AACV01018155.1/14353-14197 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaaa-ggtatgtccagatt 69
|||||||||| || ||||||||| |||||||||| | ||||||||||||||
Sbjct: 41 ggatgtgacatatcctagtacaatcaatctggacatacggtatgtccagatt 92
>RF00906;MIR1122;AACV01013196.1/2181-2029 39947:Oryza sativa
Japonica Group
Length = 153
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaa 54
||||||||||| |||||||| || ||||||||||||
Sbjct: 37 ggatgtgacactttatagtataacgaatctggacaa 72
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaa 54
||||||||||||| ||||||||| |||||||||||
Sbjct: 116 ggatgtgacacatcctagtacaataaatctggacaa 81
>RF00906;MIR1122;AAAA02007712.1/608-473 39946:Oryza sativa Indica
Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgt 87
||||||||||| ||||||||||||||||
Sbjct: 62 tgtccagattcttaatactaggatgtgt 89
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 48.1 bits (24), Expect = 2e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 34 tagtacaatgaatctggacaaaggtatgtccagattcgtaatactaggatgtgttacatc 93
|||||| | ||||||||||| || | ||||| |||||||| ||||||||||||| |||||
Sbjct: 56 tagtactacgaatctggacagagct-tgtcccgattcgtagtactaggatgtgtcacatc 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 18 gggatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatac 77
|||||||||||||| |||||| | ||||| |||||| | | |||||||||||||| |||
Sbjct: 116 gggatgtgacacatcctagtactacgaatcgggacaa-gctctgtccagattcgtagtac 58
Query: 78 tag 80
|||
Sbjct: 57 tag 55
>RF00906;MIR1122;AC217198.1/19286-19151 4537:Oryza punctata
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgt 87
||||||||||| ||||||||||||||||
Sbjct: 62 tgtccagattcttaatactaggatgtgt 89
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatact 78
||||| ||||||| || ||||| |||||| |||| || | ||||||||||||| |||
Sbjct: 41 ggatgggacacatcctaatacaacgaatctagacagagatttgtccagattcgttgcact 100
Query: 79 aggatgtgttacatctagta 98
|||||||||| |||| ||||
Sbjct: 101 aggatgtgttccatccagta 120
>RF00906;MIR1122;AACV01002428.1/16152-15997 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctgg 50
||||||||||| ||| ||||||||||||||||
Sbjct: 116 ggatgtgacactttacagtacaatgaatctgg 85
>RF00906;MIR1122;CR855052.1/5895-5769 4530:Oryza sativa (rice)
Length = 127
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 18 gggatgtgacacattatagtacaatgaatctggaca 53
||||||||||| | | ||||||||||||||||||||
Sbjct: 93 gggatgtgacataatctagtacaatgaatctggaca 58
>RF00906;MIR1122;AACV01016857.1/872-736 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 9 atctaggacgggatgtgacacattatagtacaatga 44
|||||| ||||||||||||| ||| |||||||||||
Sbjct: 31 atctagaacgggatgtgacatattctagtacaatga 66
>RF00906;MIR1122;AAAA02010702.1/418-543 39946:Oryza sativa Indica
Group
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 attatagtacaatgaatctggaca 53
||||||||||||||||||||||||
Sbjct: 52 attatagtacaatgaatctggaca 75
>RF00906;MIR1122;AB206885.1/121-10 39947:Oryza sativa Japonica
Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtaca 40
||||||||||||| || |||||||||||||| |||||||
Sbjct: 90 aaaaacgaatctaaaactggatgtgacacattctagtaca 51
>RF00906;MIR1122;AP008209.1/554501-554366 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgt 87
||||||||||| ||||||||||||||||
Sbjct: 62 tgtccagattcttaatactaggatgtgt 89
>RF00906;MIR1122;AACV01004468.1/36611-36456 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggacaa 54
||||||||||||| ||||||||| |||||||||||
Sbjct: 116 ggatgtgacacatcctagtacaataaatctggacaa 81
>RF00906;MIR1122;AC079830.9/107962-108087 39947:Oryza sativa
Japonica Group
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 attatagtacaatgaatctggaca 53
||||||||||||||||||||||||
Sbjct: 52 attatagtacaatgaatctggaca 75
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 60 tgtccagattcgtaatactaggatgtgt 87
|||||||||||||| |||||||||||||
Sbjct: 75 tgtccagattcgtagtactaggatgtgt 48
>RF00906;MIR1122;AC037426.12/45307-45458 39947:Oryza sativa
Japonica Group
Length = 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaa 55
||||||||| |||| || |||| |||||| || |||||| | |||||||||||||
Sbjct: 23 aaaaacgaaactagaaccggatatgacacgttctagtactacgaatctggacaaa 77
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| ||||||||||||||| ||||
Sbjct: 41 ggatgtgacacatcctagtacaatgaatctagaca 75
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
|||||||||| ||| |||||| |||||||||||||
Sbjct: 41 ggatgtgacatattctagtacgatgaatctggaca 75
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 acgggatgtgacacattatagtacaatgaat 46
|||||||||||||||| |||||||||||||
Sbjct: 38 acgggatgtgacacatcctagtacaatgaat 68
>RF00906;MIR1122;AAAA02030593.1/3842-3702 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctgga 51
|||||||||||||| || |||||||||| || |||||| | |||||||||
Sbjct: 22 aaaaacgaatctagtactggatgtgacatatactagtactacgaatctgga 72
>RF00906;MIR1122;AP008209.1/2115790-2115631 39947:Oryza sativa
Japonica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 ttatagtacaatgaatctggaca 53
|||||||||||||||||||||||
Sbjct: 80 ttatagtacaatgaatctggaca 102
>RF00906;MIR1122;AP006753.2/60246-60378 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| ||| ||||||||||||||||
Sbjct: 45 ggatgtgacacatcctagcacaatgaatctggaca 79
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 60 tgtccagattcgtaatactaggatgtgttacatct 94
|||||||||| || |||||||||||| ||||||||
Sbjct: 75 tgtccagatttgttatactaggatgtattacatct 41
>RF00906;MIR1122;AACV01009198.1/25225-25351 39947:Oryza sativa
Japonica Group
Length = 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| ||||| ||||||||||||||
Sbjct: 87 ggatgtgacacatcctagtataatgaatctggaca 53
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
||||||||||| | |||||||||||||| |||||
Sbjct: 53 tgtccagattcattatactaggatgtgtcacatc 86
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||| | ||||||||||||||||||||
Sbjct: 41 ggatgtgacacgtcctagtacaatgaatctggaca 75
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| ||| ||| |||||||||||||
Sbjct: 104 ggatgtgacacatcataatactatgaatctggaca 70
>RF00906;MIR1122;AACV01012603.1/10671-10517 39947:Oryza sativa
Japonica Group
Length = 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
|||||||||||| ||||||||| |||||||||||
Sbjct: 42 ggatgtgacacaacatagtacaacgaatctggaca 76
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
|||| ||||||||| ||||||||||||| ||||| ||| |||||||
Sbjct: 48 tgtctagattcgtagtactaggatgtgtcacatccggtactaggttg 94
>RF00906;MIR1122;AACV01022224.1/5549-5409 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctgga 51
|||||||||||||| || |||||||||| || |||||| | |||||||||
Sbjct: 22 aaaaacgaatctagtactggatgtgacatatattagtactacgaatctgga 72
>RF00906;MIR1122;AP008208.1/29387042-29386887 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
|||||||||| |||||||||||||||||| ||||
Sbjct: 41 ggatgtgacattttatagtacaatgaatctagaca 75
>RF00906;MIR1122;AP004994.2/6845-6714 39947:Oryza sativa Japonica
Group
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||| ||| ||||||||||||||||||||
Sbjct: 92 ggatgtgacgcatcctagtacaatgaatctggaca 58
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| |||||||| |||||||||||
Sbjct: 77 ggatgtgacacatcctagtacaacgaatctggaca 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
||||||||||||| ||||||||||||| |||||
Sbjct: 43 tgtccagattcgttgtactaggatgtgtcacatc 76
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 24 tgacacattatagtacaatgaatctggaca 53
|||||||| ||||||||||||||||||||
Sbjct: 65 tgacacatcctagtacaatgaatctggaca 36
>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa
Indica Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 24 tgacacattatagtacaatgaatctggaca 53
||||||||| |||||||| |||||||||||
Sbjct: 47 tgacacattctagtacaacgaatctggaca 76
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 20 gatgtgacacattatagtacaatgaatctggaca 53
||||||||||||| ||||||||| ||||| ||||
Sbjct: 69 gatgtgacacattctagtacaataaatctagaca 36
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 21 atgtgacacattatagtacaatgaatctggaca-aaggtatgtccagattcgtaatacta 79
|||||||||||| |||||||| ||| |||| | || | || |||| |||||| ||||||
Sbjct: 43 atgtgacacattctagtacaacaaatttggatataaagcatatccaaattcgttatacta 102
Query: 80 ggatgtgttacatc 93
|||||||| |||||
Sbjct: 103 ggatgtgtcacatc 116
>RF00906;MIR1122;AC210489.1/47612-47477 4538:Oryza glaberrima
(African rice)
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgt 85
||||||||||| ||||||||||||||
Sbjct: 62 tgtccagattcttaatactaggatgt 87
>RF00906;MIR1122;AAAA02035130.1/4826-4960 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 20 gatgtgacacattatagtacaatgaatctggaca 53
|||| |||||||| |||||||| |||||||||||
Sbjct: 94 gatgcgacacattctagtacaacgaatctggaca 61
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggac 52
||||||||||| | |||||||||||||||||||
Sbjct: 95 ggatgtgacacgtcctagtacaatgaatctggac 62
>RF00906;MIR1122;AP008210.1/20410479-20410327 39947:Oryza sativa
Japonica Group
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 60 tgtccagattcgtaatactaggatgtgttacatctagtattaggtt 105
|||||||||||||| | ||||||||||| ||||| |||||||||
Sbjct: 75 tgtccagattcgtagtcctaggatgtgtcctatctaatattaggtt 30
>RF00906;MIR1122;AAAA02000094.1/16089-15933 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 20 gatgtgacacattatagtacaatgaatctggaca 53
|||||||||| | |||||||||||||||| ||||
Sbjct: 42 gatgtgacacttgatagtacaatgaatctagaca 75
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 41 atgaatctggacaaaggtatgtccagattc 70
|||||||||||||| ||||||||||||||
Sbjct: 72 atgaatctggacaactgtatgtccagattc 43
>RF00906;MIR1122;AAAA02034764.1/9751-9907 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatctagtattaggtt 105
||||||||||| | ||||| || |||||||||||||| |||||||
Sbjct: 83 tgtccagattcattgtactatgaagtgttacatctagtcttaggtt 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 20 gatgtgacacattatagtacaatgaatctggaca 53
||||| |||| | |||||||||||||||||||||
Sbjct: 116 gatgtaacacttcatagtacaatgaatctggaca 83
>RF00906;MIR1122;AP002869.1/81681-81526 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 33 atagtacaatgaatctggacaaaggtatgtccagattc 70
||||||||| ||||||||||| | | ||||||||||||
Sbjct: 102 atagtacaacgaatctggacagatgcatgtccagattc 65
>RF00906;MIR1122;AP003711.3/78857-78701 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 20 gatgtgacacattatagtacaatgaatctggaca 53
|||| ||||| ||||||||||| |||||||||||
Sbjct: 42 gatgggacactttatagtacaacgaatctggaca 75
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 tccagattcgtaatactaggatgtgt 87
|||||||||||| |||||||||||||
Sbjct: 87 tccagattcgtagtactaggatgtgt 112
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 41 atgaatctggacaaaggtatgtccagattc 70
|||||||||||||| ||||||||||||||
Sbjct: 72 atgaatctggacaacagtatgtccagattc 43
>RF00906;MIR1122;AP002483.1/24463-24606 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||||||| ||||| | |||||| | ||| |||||| ||||||||||||| | ||||
Sbjct: 23 aaaaacgaatataggatcgtatgtgatatattctagtacgatgaatctggacatatgtat 82
Query: 61 gt 62
||
Sbjct: 83 gt 84
>RF00906;MIR1122;AC090120.8/86565-86433 4530:Oryza sativa (rice)
Length = 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 64 cagattcgtaatactaggatgtgttacatc 93
||||||| |||||||||||||||| |||||
Sbjct: 63 cagattcataatactaggatgtgtcacatc 92
>RF00906;MIR1122;AP008211.1/22476267-22476112 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 8 aatctaggacgggatgtgacacattatagtacaatgaatctggaca 53
||||||| || |||||||||| | |||||||||||||||| ||||
Sbjct: 30 aatctagtaccggatgtgacatttcatagtacaatgaatctagaca 75
>RF00906;MIR1122;AP008207.1/915692-915536 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 ctaggacgggatgtgacacattatagtacaatgaatct 48
||||||| |||||||||| | ||||||||||||||||
Sbjct: 33 ctaggaccagatgtgacacttcatagtacaatgaatct 70
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
|||||||||||||| ||||||| ||||| |||||
Sbjct: 49 tgtccagattcgtagtactaggttgtgtcacatc 82
>RF00906;MIR1122;AP008212.1/7989879-7989724 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 33 atagtacaatgaatctggacaaaggtatgtccagattc 70
||||||||| ||||||||||| | | ||||||||||||
Sbjct: 102 atagtacaacgaatctggacagatgcatgtccagattc 65
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 19 ggatgtgacacattatagtacaatgaatctggac 52
||||||||||||| |||||||| ||||||||||
Sbjct: 91 ggatgtgacacatcctagtacaacgaatctggac 58
>RF00906;MIR1122;AP002908.2/68380-68536 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 12 taggacgggatgtgacacattatagtacaatgaatctggaca 53
|||||| |||| |||||| | ||||||||| |||||||||||
Sbjct: 124 taggaccggatatgacacttcatagtacaacgaatctggaca 83
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 86/106 (81%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 1 aaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtat 60
|||||||||| ||| || || |||| |||||| |||||||| ||| || ||| | | ||
Sbjct: 23 aaaaacgaatgtagaactgg-tgtggcacattctagtacaacaaatatgaacatatgcat 81
Query: 61 gtccagattcgtaatactaggatgtgttacatctagtattaggttg 106
||| |||||||| ||||||||||||| ||||| ||| |||||||
Sbjct: 82 gtctagattcgttttactaggatgtgtcacatccagtcctaggttg 127
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 60 tgtccagattcgtaatactaggatgtgttacatc 93
||||||||||||| |||||||||| ||| |||||
Sbjct: 81 tgtccagattcgttatactaggatatgtcacatc 114
>RF00906;MIR1122;AAAA02022559.1/10581-10446 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 44 aatctggaca-aaggtatgtccagattcgtaatactaggatg 84
|||||||||| ||||||| |||||||||||| | ||||||||
Sbjct: 76 aatctggacataaggtatatccagattcgtagtcctaggatg 35
