miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 101 bits (51), Expect = 3e-21
Identities = 144/169 (85%), Gaps = 7/169 (4%)
Strand = Plus / Minus
Query: 7 atagaagaatcatatttggtagccaaggatgacttgcctatttcttgagagtaaaatggg 66
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 167 atagaagaatcatatttggtagccaaggatgacttgcctgtttctt-tgagtaaaatggg 109
Query: 67 catggtgtcatgtt--aaaagttactgtaggtagtttcaa--tttgaccattttcctta- 121
| |||||||||| | |||| ||| || || | |||| |||||||||| || |
Sbjct: 108 -ttagtgtcatgtttgacaagtgactataagttatatcaagcaatgaccattttactcat 50
Query: 122 caaatgatattaggcagtctccttggctatccttatatgttcttctctc 170
|||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 49 caaaagacatcaggcagtctccttggctatccttatatgttcttctctc 1
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 77.8 bits (39), Expect = 5e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 127 gatattaggcagtctccttggctatccttatatgttcttctct 169
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 44 gatatcaggcagtctccttggctatccttatatgttcttctct 2
Score = 77.8 bits (39), Expect = 5e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 7 atagaagaatcatatttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atagaagaatcatatttggtagccaaggatgacttgcct 127
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 73.8 bits (37), Expect = 7e-13
Identities = 130/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 15 atcatatttggtagccaaggatgacttgcctatttcttgagagtaaaatgggcatggtgt 74
||||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||
Sbjct: 1 atcatatttggtagccaaggatgacttgcctgtttctt-tgagtaaaatggg-ttagtgt 58
Query: 75 catgtt--aaaagttactgtaggtagtttcaa--tttgaccattttcctta-caaatgat 129
|||||| | |||| ||| || || | |||| |||||||||| || | |||| ||
Sbjct: 59 catgtttgacaagtgactataagttatatcaagcaatgaccattttactcatcaaaagac 118
Query: 130 attaggcagtctccttggctatccttatatgttct 164
|| ||||||||||||||||||||||||||||||||
Sbjct: 119 atcaggcagtctccttggctatccttatatgttct 153
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 133 aggcagtctccttggctatccttatatgttcttct 167
|||||||||||||||||||||||||||||||||||
Sbjct: 38 aggcagtctccttggctatccttatatgttcttct 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 18 atatttggtagccaaggatgacttgcct 45
||||||||||||||||||||||||||||
Sbjct: 154 atatttggtagccaaggatgacttgcct 127
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 127 gatattaggcagtctccttggctatccttatatgttct 164
||||| ||||||||||||||||||||||||||||||||
Sbjct: 114 gatatcaggcagtctccttggctatccttatatgttct 151
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 atcatatttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||||||||
Sbjct: 1 atcatatttggtagccaaggatgacttgcct 31
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana (thale
cress)
Length = 152
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 133 aggcagtctccttggctatccttatatgttct 164
||||||||||||||||||||||||||||||||
Sbjct: 121 aggcagtctccttggctatccttatatgttct 152
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 18 atatttggtagccaaggatgacttgcct 45
||||||||||||||||||||||||||||
Sbjct: 5 atatttggtagccaaggatgacttgcct 32
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcctatttc 50
||||||||||||||||||||||||||||||
Sbjct: 126 tttggtagccaaggatgacttgcctatttc 97
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcctatttc 50
||||||||||||||||||||||||||||||
Sbjct: 11 tttggtagccaaggatgacttgcctatttc 40
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||||||||||||||||||||
Sbjct: 129 tttggtagccaaggatgacttgccta 104
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcctatttc 50
|||| |||||||||||||||||||||||||
Sbjct: 137 tttgatagccaaggatgacttgcctatttc 108
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgccta 86
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgccta 86
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcctatt 48
||||||||||||||||||||||||||
Sbjct: 128 tggtagccaaggatgacttgcctatt 103
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgccta 34
>RF00645;MIR169_2;AASG02006505.1/420-283 3988:Ricinus communis
(castor bean)
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcctatttc 50
|||| |||||||||||||||||||||||||
Sbjct: 8 tttgatagccaaggatgacttgcctatttc 37
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgccta 34
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgccta 34
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcctatt 48
||||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctatt 36
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 121 tttggtagccaaggatgacttgcct 97
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 129 tttggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 125 tttggtagccaaggatgacttgcct 101
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 144 tttggtagccaaggatgacttgcct 120
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 137 tttggtagccaaggatgacttgcct 113
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 10 gaagaatcatatttggtagccaaggatgacttgccta 46
||||| |||| |||| |||||||||||||||||||||
Sbjct: 152 gaagagtcatgtttgatagccaaggatgacttgccta 116
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcctat 47
|||||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcctat 86
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcctat 47
|||||||||||||||||||||||||
Sbjct: 112 tggtagccaaggatgacttgcctat 88
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcct 45
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcctat 47
|||||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcctat 30
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcctat 47
|||||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcctat 30
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcc 44
||||||||||||||||||||||||
Sbjct: 119 tttggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcc 44
||||||||||||||||||||||||
Sbjct: 118 tttggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcc 44
||||||||||||||||||||||||
Sbjct: 113 tttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcc 44
||||||||||||||||||||||||
Sbjct: 113 tttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgccta 46
||||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgccta 101
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcc 44
||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcc 44
||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcc 44
||||||||||||||||||||||||
Sbjct: 10 tttggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgccta 46
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgccta 33
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcct 95
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 11 aagaatcatatttggtagccaaggatgacttgcct 45
|||| |||| ||| |||||||||||||||||||||
Sbjct: 181 aagagtcatgtttagtagccaaggatgacttgcct 147
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcct 101
>RF00865;MIR169_5;AARH01006471.1/64000-63854 3694:Populus
trichocarpa
Length = 147
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 ggtagccaaggatgacttgcctatttc 50
|||||||||||| ||||||||||||||
Sbjct: 126 ggtagccaaggacgacttgcctatttc 100
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 115 tggtagccaaggatgacttgcct 93
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcct 94
>RF00865;MIR169_5;EU941000.1/258-87 4577:Zea mays
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcctat 47
||||||||||||| |||||||||||||
Sbjct: 157 tttggtagccaagaatgacttgcctat 131
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 131 tggtagccaaggatgacttgcct 109
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcct 89
>RF00865;MIR169_5;AP008208.1/18658095-18658282 39947:Oryza sativa
Japonica Group
Length = 188
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 ggtagccaaggatgacttgccta 46
|||||||||||||||||||||||
Sbjct: 172 ggtagccaaggatgacttgccta 150
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 140 tggtagccaaggatgacttgcct 118
>RF00865;MIR169_5;AAAA02031014.1/17953-17766 39946:Oryza sativa
Indica Group
Length = 188
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcctat 47
||||||||||||| |||||||||||||
Sbjct: 170 tttggtagccaagaatgacttgcctat 144
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;AC123517.2/63512-63700 39947:Oryza sativa Japonica
Group
Length = 189
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgcctat 47
||||||||||||| |||||||||||||
Sbjct: 176 tttggtagccaagaatgacttgcctat 150
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcct 105
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcct 31
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcct 31
>RF00645;MIR169_2;AARH01006471.1/63866-63996 3694:Populus
trichocarpa
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 ggtagccaaggatgacttgcctatttc 50
|||||||||||| ||||||||||||||
Sbjct: 10 ggtagccaaggacgacttgcctatttc 36
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 tcatatttggtagccaaggatgacttgccta 46
|||| |||| |||||||||||||||||||||
Sbjct: 3 tcatgtttgatagccaaggatgacttgccta 33
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;EU941000.1/95-252 4577:Zea mays
Length = 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgcctat 47
||||||||||||| |||||||||||||
Sbjct: 8 tttggtagccaagaatgacttgcctat 34
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AP004062.3/84631-84457 39947:Oryza sativa
Japonica Group
Length = 175
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 ggtagccaaggatgacttgccta 46
|||||||||||||||||||||||
Sbjct: 10 ggtagccaaggatgacttgccta 32
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcct 45
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00865;MIR169_5;AB016889.1/45011-45196 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 16 tcatatttggtagccaaggatgacttgcct 45
|||| ||| |||||||||||||||||||||
Sbjct: 177 tcatgtttagtagccaaggatgacttgcct 148
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tggtagccaaggatgacttgcc 44
||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcc 89
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 26 tagccaaggatgacttgcctat 47
||||||||||||||||||||||
Sbjct: 107 tagccaaggatgacttgcctat 86
>RF00865;MIR169_5;ABXC01002768.1/23520-23657 4558:Sorghum bicolor
(sorghum)
Length = 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 25 gtagccaaggatgacttgccta 46
||||||||||||||||||||||
Sbjct: 117 gtagccaaggatgacttgccta 96
>RF00865;MIR169_5;AC123517.2/59786-59972 39947:Oryza sativa Japonica
Group
Length = 187
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||||||| ||||||||||||
Sbjct: 174 tttggtagccaagaatgacttgccta 149
>RF00645;MIR169_2;AY551201.1/49-220 3702:Arabidopsis thaliana
(thale cress)
Length = 172
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 16 tcatatttggtagccaaggatgacttgcct 45
|||| ||| |||||||||||||||||||||
Sbjct: 3 tcatgtttagtagccaaggatgacttgcct 32
>RF00645;MIR169_2;AB016889.1/45191-45017 3702:Arabidopsis thaliana
(thale cress)
Length = 175
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 16 tcatatttggtagccaaggatgacttgcct 45
|||| ||| |||||||||||||||||||||
Sbjct: 5 tcatgtttagtagccaaggatgacttgcct 34
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tggtagccaaggatgacttgcc 44
||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcc 34
>RF00645;MIR169_2;CAAP02000903.1/14911-14657 29760:Vitis vinifera
Length = 255
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 tttggtagccaaggatgacttgccta 46
||||||||| ||||||||||||||||
Sbjct: 10 tttggtagcgaaggatgacttgccta 35
>RF00645;MIR169_2;ABXC01002768.1/23650-23526 4558:Sorghum bicolor
(sorghum)
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 gtagccaaggatgacttgccta 46
||||||||||||||||||||||
Sbjct: 15 gtagccaaggatgacttgccta 36
