miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 254 bits (128), Expect = 5e-67
Identities = 128/128 (100%)
Strand = Plus / Minus
Query: 62 tgataagggtgtagctctggtagccaaggatgacttgcctgtgtccttgtgtagaggatc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tgataagggtgtagctctggtagccaaggatgacttgcctgtgtccttgtgtagaggatc 69
Query: 122 attcagaaaatgagccttgaactggttcataggcagtctccttggctagtctgagtcgct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 attcagaaaatgagccttgaactggttcataggcagtctccttggctagtctgagtcgct 9
Query: 182 cttatcac 189
||||||||
Sbjct: 8 cttatcac 1
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa Japonica
Group
Length = 115
Score = 228 bits (115), Expect = 3e-59
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 69 ggtgtagctctggtagccaaggatgacttgcctgtgtccttgtgtagaggatcattcaga 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgtagctctggtagccaaggatgacttgcctgtgtccttgtgtagaggatcattcaga 60
Query: 129 aaatgagccttgaactggttcataggcagtctccttggctagtctgagtcgctct 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgagccttgaactggttcataggcagtctccttggctagtctgagtcgctct 115
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 87.7 bits (44), Expect = 7e-17
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 66 aagggtgtagctctggtagccaaggatgacttgcctgtgtccttgtgt 113
|||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aagggtttagctctggtagccaaggatgacttgcctgtgtccttgtgt 90
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica Group
Length = 123
Score = 79.8 bits (40), Expect = 2e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 74 agctctggtagccaaggatgacttgcctgtgtccttgtgt 113
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctctggtagccaaggatgacttgcctgtgtccttgtgt 40
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 75 gctctggtagccaaggatgacttgcctgtg 104
||||||||||||||||||||||||||||||
Sbjct: 120 gctctggtagccaaggatgacttgcctgtg 91
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 75 gctctggtagccaaggatgacttgcctgtg 104
||||||||||||||||||||||||||||||
Sbjct: 135 gctctggtagccaaggatgacttgcctgtg 106
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 144 tggttcataggcagtctccttggctagtctgagt 177
||||||||||||||||||||||||||| ||||||
Sbjct: 46 tggttcataggcagtctccttggctagcctgagt 13
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 76 ctctggtagccaaggatgacttgcctgtgtcctt 109
||||| |||||||||||||||||||| |||||||
Sbjct: 113 ctctgatagccaaggatgacttgcctatgtcctt 80
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 77 tctggtagccaaggatgacttgcctgtgtc 106
||||||||||||||||||||||||||||||
Sbjct: 129 tctggtagccaaggatgacttgcctgtgtc 100
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 75 gctctggtagccaaggatgacttgcctgtg 104
||||||||||||||||||||||||||||||
Sbjct: 7 gctctggtagccaaggatgacttgcctgtg 36
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum bicolor
(sorghum)
Length = 139
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 75 gctctggtagccaaggatgacttgcctgtg 104
||||||||||||||||||||||||||||||
Sbjct: 9 gctctggtagccaaggatgacttgcctgtg 38
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 76 ctctggtagccaaggatgacttgcctgtgtcctt 109
||||| ||||||||||||||||||||||||||||
Sbjct: 4 ctctgatagccaaggatgacttgcctgtgtcctt 37
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 144 tggttcataggcagtctccttggctagtctgagt 177
||||||||||||||||||||||||||| ||||||
Sbjct: 76 tggttcataggcagtctccttggctagcctgagt 109
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa Japonica
Group
Length = 131
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcctgtgtc 106
||||||||||||||||||||||||||||||
Sbjct: 9 tctggtagccaaggatgacttgcctgtgtc 38
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 76 ctctggtagccaaggatgacttgcctgtgtcct 108
||||| |||||||||||||||||||||||||||
Sbjct: 114 ctctgatagccaaggatgacttgcctgtgtcct 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 143 ctggttcataggcagtctccttggctagtctgagtcgctcttat 186
||||||||| |||||||||||||||||| |||||| | ||||||
Sbjct: 47 ctggttcatgggcagtctccttggctagcctgagtggttcttat 4
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 76 ctctggtagccaaggatgacttgcctgtgtcct 108
||||| |||||||||||||||||||||||||||
Sbjct: 4 ctctgatagccaaggatgacttgcctgtgtcct 36
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 143 ctggttcataggcagtctccttggctagtctgagt 177
||||||||| |||||||||||||||||| ||||||
Sbjct: 71 ctggttcatgggcagtctccttggctagcctgagt 105
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 150 ataggcagtctccttggctagtctgagtcgctctt 184
||||||||||||||||||||| |||||| ||||||
Sbjct: 40 ataggcagtctccttggctagcctgagtggctctt 6
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 76 ctctggtagccaaggatgacttgcct 101
||||||||||||||||||||||||||
Sbjct: 131 ctctggtagccaaggatgacttgcct 106
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcctgtgtcc 107
|||||||||||||||||||||||||| ||||
Sbjct: 9 tctggtagccaaggatgacttgcctgcgtcc 39
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 78 ctggtagccaaggatgacttgcctgt 103
||||||||||||||||||||||||||
Sbjct: 141 ctggtagccaaggatgacttgcctgt 116
>RF00645;MIR169_2;ABXC01005011.1/62641-62556 4558:Sorghum bicolor
(sorghum)
Length = 86
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 144 tggttcataggcagtctccttggcta 169
||||||||||||||||||||||||||
Sbjct: 61 tggttcataggcagtctccttggcta 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 agccaaggatgacttgcctgtgtcctt 109
||||||||||||||||||| |||||||
Sbjct: 1 agccaaggatgacttgcctatgtcctt 27
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 76 ctctggtagccaaggatgacttgcct 101
||||||||||||||||||||||||||
Sbjct: 8 ctctggtagccaaggatgacttgcct 33
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 150 ataggcagtctccttggctagtctgagtcgctct 183
||||||||||||||||||||| |||||| |||||
Sbjct: 99 ataggcagtctccttggctagcctgagtggctct 132
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 ctggtagccaaggatgacttgcctgt 103
||||||||||||||||||||||||||
Sbjct: 9 ctggtagccaaggatgacttgcctgt 34
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctgt 103
|||||||||||||||||||||||||
Sbjct: 151 tggtagccaaggatgacttgcctgt 127
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 77 tctggtagccaaggatgacttgcct 101
|||||||||||||||||||||||||
Sbjct: 126 tctggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 77 tctggtagccaaggatgacttgcct 101
|||||||||||||||||||||||||
Sbjct: 112 tctggtagccaaggatgacttgcct 88
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 77 tctggtagccaaggatgacttgcct 101
|||||||||||||||||||||||||
Sbjct: 114 tctggtagccaaggatgacttgcct 90
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 153 ggcagtctccttggctagtctgagtcgctcttat 186
|||||||||||||||||| |||| || |||||||
Sbjct: 37 ggcagtctccttggctagcctgactcactcttat 4
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctgt 103
|||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctgt 33
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus trichocarpa
Length = 210
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctgt 103
|||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctgt 34
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcct 101
|||||||||||||||||||||||||
Sbjct: 8 tctggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcct 101
|||||||||||||||||||||||||
Sbjct: 4 tctggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcct 101
|||||||||||||||||||||||||
Sbjct: 4 tctggtagccaaggatgacttgcct 28
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 119 tggtagccaaggatgacttgcctg 96
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcctg 94
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcctg 104
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 142 tggtagccaaggatgacttgcctg 119
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 77 tctggtagccaaggatgacttgcc 100
||||||||||||||||||||||||
Sbjct: 112 tctggtagccaaggatgacttgcc 89
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 153 ggcagtctccttggctagtctg 174
||||||||||||||||||||||
Sbjct: 37 ggcagtctccttggctagtctg 16
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 135 tggtagccaaggatgacttgcctg 112
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 115 tggtagccaaggatgacttgcctg 92
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 152 aggcagtctccttggctagtctgagtcgctcttatc 187
||||||||||||||||||||||| | |||||||||
Sbjct: 38 aggcagtctccttggctagtctgggcggctcttatc 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 82 tagccaaggatgacttgcctgtg 104
|||||||||||||||||||||||
Sbjct: 155 tagccaaggatgacttgcctgtg 133
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana (thale
cress)
Length = 152
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus trichocarpa
Length = 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcc 100
||||||||||||||||||||||||
Sbjct: 11 tctggtagccaaggatgacttgcc 34
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 ggcagtctccttggctagtctg 174
||||||||||||||||||||||
Sbjct: 86 ggcagtctccttggctagtctg 107
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis vinifera
Length = 118
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcctg 102
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 150 ataggcagtctcctt-ggctagtctgagtcgctcttatc 187
||||||||||||||| ||||||||||| | |||||||||
Sbjct: 41 ataggcagtctcctttggctagtctgactggctcttatc 3
>RF00865;MIR169_5;BT061088.1/1092-1244 4577:Zea mays
Length = 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 82 tagccaaggatgacttgcctgtg 104
|||||||||||||||||||||||
Sbjct: 134 tagccaaggatgacttgcctgtg 112
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 82 tagccaaggatgacttgcctgtg 104
|||||||||||||||||||||||
Sbjct: 133 tagccaaggatgacttgcctgtg 111
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 109 tggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 109 tggtagccaaggatgacttgcct 87
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;BT062831.1/323-237 4577:Zea mays
Length = 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 agccaaggatgacttgcctgtgtcctt 109
||||||||||||||||||| |||||||
Sbjct: 1 agccaaggatgacttgcctatgtcctt 27
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum bicolor
(sorghum)
Length = 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tagccaaggatgacttgcctgtg 104
|||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctgtg 35
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcct 101
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tagccaaggatgacttgcctgtg 104
|||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctgtg 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 aggcagtctccttggctagtctg 174
|||||||||||||||||||||||
Sbjct: 130 aggcagtctccttggctagtctg 152
>RF00865;MIR169_5;AB016889.1/45011-45196 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 81 gtagccaaggatgacttgcctg 102
||||||||||||||||||||||
Sbjct: 168 gtagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 81 gtagccaaggatgacttgcctg 102
||||||||||||||||||||||
Sbjct: 167 gtagccaaggatgacttgcctg 146
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcc 100
||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcc 100
||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcc 100
||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 77 tctggtagccaaggatgacttgcctg 102
|||| |||||||||||||||||||||
Sbjct: 135 tctgatagccaaggatgacttgcctg 110
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 79 tggtagccaaggatgacttgcc 100
||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 77 tctggtagccaaggatgacttgcctg 102
|||| |||||||||||||||||||||
Sbjct: 149 tctgatagccaaggatgacttgcctg 124
>RF00865;MIR169_5;ABXC01001464.1/182397-182247 4558:Sorghum bicolor
(sorghum)
Length = 151
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 152 aggcagtctccttggctagtctgagt 177
|||||| |||||||||||||||||||
Sbjct: 38 aggcagcctccttggctagtctgagt 13
>RF00865;MIR169_5;AP008208.1/18658095-18658282 39947:Oryza sativa
Japonica Group
Length = 188
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 ggtagccaaggatgacttgcct 101
||||||||||||||||||||||
Sbjct: 172 ggtagccaaggatgacttgcct 151
>RF00645;MIR169_2;AY551201.1/49-220 3702:Arabidopsis thaliana (thale
cress)
Length = 172
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 gtagccaaggatgacttgcctg 102
||||||||||||||||||||||
Sbjct: 12 gtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AB016889.1/45191-45017 3702:Arabidopsis thaliana
(thale cress)
Length = 175
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 gtagccaaggatgacttgcctg 102
||||||||||||||||||||||
Sbjct: 14 gtagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcc 100
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcc 100
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggtagccaaggatgacttgcc 100
||||||||||||||||||||||
Sbjct: 12 tggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcctg 102
|||| |||||||||||||||||||||
Sbjct: 8 tctgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tctggtagccaaggatgacttgcctg 102
|||| |||||||||||||||||||||
Sbjct: 8 tctgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;BT061088.1/1224-1114 4577:Zea mays
Length = 111
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 agccaaggatgacttgcctgtg 104
||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctgtg 22
>RF00645;MIR169_2;ABXC01001464.1/182253-182392 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 aggcagtctccttggctagtctgagt 177
|||||| |||||||||||||||||||
Sbjct: 108 aggcagcctccttggctagtctgagt 133
>RF00645;MIR169_2;AP004062.3/84631-84457 39947:Oryza sativa Japonica
Group
Length = 175
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 ggtagccaaggatgacttgcct 101
||||||||||||||||||||||
Sbjct: 10 ggtagccaaggatgacttgcct 31
