miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00073;mir-156;AASG02007590.1/3624-3708 3988:Ricinus communis
(castor bean)
Length = 85
Score = 168 bits (85), Expect = 8e-42
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ttgacagaagagagagagcacaacccggcattaggctaaagagtctttgcctttgttggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacaacccggcattaggctaaagagtctttgcctttgttggg 60
Query: 65 agtgtgctctctcctcttctgtcat 89
|||||||||||||||||||||||||
Sbjct: 61 agtgtgctctctcctcttctgtcat 85
>RF00073;mir-156;AP008215.1/18234552-18234465 39947:Oryza sativa
Japonica Group
Length = 88
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcacaacccggca 34
|||||||||||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacaacccggca 30
>RF00073;mir-156;ABXC01001444.1/103334-103247 4558:Sorghum bicolor
(sorghum)
Length = 88
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tgacagaagagagagagcacaaccc 30
|||||||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacaaccc 26
