miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;AC135313.13/38621-38703 3880:Medicago truncatula
(barrel medic)
Length = 83
Score = 165 bits (83), Expect = 1e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 11 agagtggatttgagccaggatggcttgccggcatgcattttagggtgttgctagcgggcc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagtggatttgagccaggatggcttgccggcatgcattttagggtgttgctagcgggcc 60
Query: 71 atcttgtctcacatttgctatct 93
|||||||||||||||||||||||
Sbjct: 61 atcttgtctcacatttgctatct 83
>RF00645;MIR169_2;AC186138.3/102418-102528 3880:Medicago
truncatula (barrel medic)
Length = 111
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 atttgagccaggatggcttgccggcat 44
||||||||||||||| |||||||||||
Sbjct: 8 atttgagccaggatgacttgccggcat 34
>RF00645;MIR169_2;BABK01002592.1/3832-3946 34305:Lotus japonicus
Length = 115
Score = 46.1 bits (23), Expect = 8e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 11 agagtggatttgagcca-ggatggcttgccggcatgcat 48
|||||| |||||||||| ||||| |||||||||||||||
Sbjct: 1 agagtgcatttgagccaaggatgacttgccggcatgcat 39
