miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00451;mir-395;AC149601.3/39285-39203 3880:Medicago truncatula
(barrel medic)
Length = 83
Score = 125 bits (63), Expect = 6e-29
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 gagttcctctgaacgcttcatataagaggttatccatcttcattgaagtgtttgggggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gagttcctctgaacgcttcatataagaggttatccatcttcattgaagtgtttgggggaa 70
Query: 61 ctc 63
|||
Sbjct: 71 ctc 73
>RF00451;mir-395;BABK01002710.1/3004-3117 34305:Lotus japonicus
Length = 114
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 37 tcttcattgaagtgtttgggggaactc 63
|||||| ||||||||||||||||||||
Sbjct: 78 tcttcaatgaagtgtttgggggaactc 104
>RF00451;mir-395;AC146854.19/12911-13031 3880:Medicago truncatula
(barrel medic)
Length = 121
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 ttcattgaagtgtttgggggaactc 63
|||| ||||||||||||||||||||
Sbjct: 87 ttcaatgaagtgtttgggggaactc 111
>RF00451;mir-395;AC149601.3/73603-73508 3880:Medicago truncatula
(barrel medic)
Length = 96
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 ttcattgaagtgtttgggggaactc 63
|||| ||||||||||||||||||||
Sbjct: 62 ttcaatgaagtgtttgggggaactc 86
