miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00451;mir-395;BABK01002710.1/3004-3117 34305:Lotus japonicus
Length = 114
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tcttcaatgaagtgtttgggggaact 100
||||||||||||||||||||||||||
Sbjct: 78 tcttcaatgaagtgtttgggggaact 103
>RF00451;mir-395;AC149601.3/39285-39203 3880:Medicago truncatula
(barrel medic)
Length = 83
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ctctgaacacttcatacaagaggttatccatct 39
|||||||| ||||||| ||||||||||||||||
Sbjct: 17 ctctgaacgcttcatataagaggttatccatct 49
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tcttcaatgaagtgtttgggggaact 100
|||||| |||||||||||||||||||
Sbjct: 47 tcttcattgaagtgtttgggggaact 72
>RF00451;mir-395;AC146854.19/12911-13031 3880:Medicago truncatula
(barrel medic)
Length = 121
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ttcaatgaagtgtttgggggaact 100
||||||||||||||||||||||||
Sbjct: 87 ttcaatgaagtgtttgggggaact 110
>RF00451;mir-395;AC149601.3/73603-73508 3880:Medicago truncatula
(barrel medic)
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ttcaatgaagtgtttgggggaact 100
||||||||||||||||||||||||
Sbjct: 62 ttcaatgaagtgtttgggggaact 85
>RF00451;mir-395;AC149601.3/8344-8225 3880:Medicago truncatula
(barrel medic)
Length = 120
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
||||| |||||||||||||||||||||
Sbjct: 83 ttcttaaatgaagtgtttgggggaact 109
>RF00451;mir-395;AC149601.3/18879-18765 3880:Medicago truncatula
(barrel medic)
Length = 115
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
||||| |||||||||||||||||||||
Sbjct: 78 ttcttaaatgaagtgtttgggggaact 104
>RF00451;mir-395;AC149601.3/13054-12939 3880:Medicago truncatula
(barrel medic)
Length = 116
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 tcaatgaagtgtttgggggaact 100
|||||||||||||||||||||||
Sbjct: 83 tcaatgaagtgtttgggggaact 105
