miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AASG02003632.1/1061-930 3988:Ricinus communis
           (castor bean)
          Length = 132

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 22  agccaagaatgacttgcctgcttc 45
           ||||||||||||||||||||||||
Sbjct: 112 agccaagaatgacttgcctgcttc 89





>RF00645;MIR169_2;AASG02003632.1/937-1055 3988:Ricinus communis
          (castor bean)
          Length = 119

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 agccaagaatgacttgcctgcttc 45
          ||||||||||||||||||||||||
Sbjct: 14 agccaagaatgacttgcctgcttc 37





>RF00865;MIR169_5;AASG02003632.1/6431-6569 3988:Ricinus communis
           (castor bean)
          Length = 139

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 22  agccaagaatgacttgcctgct 43
           ||||||||||||||||||||||
Sbjct: 119 agccaagaatgacttgcctgct 98





>RF00645;MIR169_2;AASG02003632.1/6562-6437 3988:Ricinus communis
          (castor bean)
          Length = 126

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 agccaagaatgacttgcctgct 43
          ||||||||||||||||||||||
Sbjct: 14 agccaagaatgacttgcctgct 35