miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcctg 41
||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagagtcttgtttgatagccaaggatgacttgcctg 119
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 112 tccttggctaacctgacaggctcttctct 140
|||||||||| ||||||||||||||||||
Sbjct: 30 tccttggctagcctgacaggctcttctct 2
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcctg 41
||||||||||||||||||||||||||||||||||||
Sbjct: 160 aagagtcttgtttgatagccaaggatgacttgcctg 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 112 tccttggctaacctgacaggctcttctct 140
||||||||||| |||||||||||||||||
Sbjct: 30 tccttggctaagctgacaggctcttctct 2
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcctg 41
||||||||||||||||||||||||||||||||||||
Sbjct: 148 aagagtcttgtttgatagccaaggatgacttgcctg 113
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 4 taaagagtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||||| |||||||||||||||||||||
Sbjct: 141 taaagagtcttgtttggtagccaaggatgacttgcctg 104
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 5 aaagagtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||| ||||||||||||||||||||||||
Sbjct: 146 aaagagtcttgtctgatagccaaggatgacttgcctg 110
>RF00865;MIR169_5;AASG02003632.1/6431-6569 3988:Ricinus communis
(castor bean)
Length = 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 5 aaagagtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||||||||||||| ||||||||||||
Sbjct: 136 aaagagtcttgtttgatagccaagaatgacttgcctg 100
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus
trichocarpa
Length = 151
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctg 33
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||| |||||||||||||||||||||
Sbjct: 135 aagagtcttgtttggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 agataaagagtcttgtttgatagccaaggatgacttgcct 40
|||| ||||||| |||||||||||||||||||||||||||
Sbjct: 156 agatgaagagtcatgtttgatagccaaggatgacttgcct 117
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcctg 41
||||||||||| ||||||||||||||||||||||||
Sbjct: 159 aagagtcttgtctgatagccaaggatgacttgcctg 124
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctgta 43
||||||||||| |||||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctgta 35
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 1 agataaagagtc-ttgtttgatagccaaggatgacttgcct 40
|||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 145 agataaagagtcattgtttggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AY551203.1/210-25 3702:Arabidopsis thaliana (thale
cress)
Length = 186
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 5 aaagagtcttgtttgatagccaaggatgacttgcctg 41
|||||||| ||||| ||||||||||||||||||||||
Sbjct: 183 aaagagtcatgtttaatagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1 agataaagagtcttgtttgatagccaaggatgacttgcctg 41
|||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 152 agatgaagagtctcgtttggtagccaaggatgacttgcctg 112
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
||||||||||| |||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
||||||||||| |||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/6562-6437 3988:Ricinus communis
(castor bean)
Length = 126
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||||||||| ||||||||||||
Sbjct: 1 agtcttgtttgatagccaagaatgacttgcctg 33
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
|||||||| ||||||||||||||||||||||||
Sbjct: 1 agtcttgtctgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
|||||||| ||||||||||||||||||||||||
Sbjct: 1 agtcttgtctgatagccaaggatgacttgcctg 33
>RF00865;MIR169_5;ABIM01014270.1/4571-4728 3649:Carica papaya
(papaya)
Length = 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcctg 41
|||||||||||||| |||||||| ||||||||||||
Sbjct: 154 aagagtcttgtttggtagccaagaatgacttgcctg 119
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcct 40
|||| |||||||||||||||||||||||||||
Sbjct: 1 agtcatgtttgatagccaaggatgacttgcct 32
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 7 agagtcttgtttgatagccaaggatgacttgcctg 41
||||| ||||| |||||||||||||||||||||||
Sbjct: 146 agagtgttgttggatagccaaggatgacttgcctg 112
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 14 tgtttgatagccaaggatgacttgcct 40
|||||||||||||||||||||||||||
Sbjct: 139 tgtttgatagccaaggatgacttgcct 113
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 5 aaagagtcttgtttgatagccaaggatgacttgcc 39
||||||| ||||||| |||||||||||||||||||
Sbjct: 124 aaagagtgttgtttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 2 gataaagagtcttgtttgatagccaaggatgacttgcct 40
|||||||||||| || || ||||||||||||||||||||
Sbjct: 140 gataaagagtctcgtctggtagccaaggatgacttgcct 102
>RF00645;MIR169_2;AY551203.1/30-206 3702:Arabidopsis thaliana
(thale cress)
Length = 177
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 agagtcttgtttgatagccaaggatgacttgcctg 41
|||||| ||||| ||||||||||||||||||||||
Sbjct: 1 agagtcatgtttaatagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AASG02006505.1/420-283 3988:Ricinus communis
(castor bean)
Length = 138
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 tgtttgatagccaaggatgacttgcct 40
|||||||||||||||||||||||||||
Sbjct: 6 tgtttgatagccaaggatgacttgcct 32
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcc 39
||||||| |||||| |||||||||||||||||||
Sbjct: 129 aagagtcgtgtttggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcc 39
||||||| |||||| |||||||||||||||||||
Sbjct: 128 aagagtcgtgtttggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AASG02003941.1/7647-7771 3988:Ricinus communis
(castor bean)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tgtttgatagccaaggatgacttgcc 39
||||||||||||||||||||||||||
Sbjct: 113 tgtttgatagccaaggatgacttgcc 88
>RF00645;MIR169_2;AASG02003941.1/7763-7653 3988:Ricinus communis
(castor bean)
Length = 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tgtttgatagccaaggatgacttgcc 39
||||||||||||||||||||||||||
Sbjct: 5 tgtttgatagccaaggatgacttgcc 30
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 5 aaagagtcttgtttgatagccaaggatgacttgcctg 41
|||||||| ||||| |||||||||||||||||||||
Sbjct: 182 aaagagtcatgtttagtagccaaggatgacttgcctg 146
>RF00865;MIR169_5;AARH01000472.1/145345-145210 3694:Populus
trichocarpa
Length = 136
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcctgt 42
|||||||||||| | |||||||||| |||||||||||
Sbjct: 132 aagagtcttgttagttagccaaggacgacttgcctgt 96
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 18 tgatagccaaggatgacttgcctgt 42
|||||||||||||||||||||||||
Sbjct: 111 tgatagccaaggatgacttgcctgt 87
>RF00645;MIR169_2;ABIM01014270.1/4721-4577 3649:Carica papaya
(papaya)
Length = 145
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
||||||||||| |||||||| ||||||||||||
Sbjct: 1 agtcttgtttggtagccaagaatgacttgcctg 33
>RF00645;MIR169_2;ABIM01022203.1/1632-1495 3649:Carica papaya
(papaya)
Length = 138
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 ttgtttgatagccaaggatgacttgcctg 41
||||| |||||||||||||||||||||||
Sbjct: 5 ttgttggatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctg 41
||||| ||||| |||||||||||||||||||||
Sbjct: 1 agtctcgtttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgatagccaaggatgacttgcctgt 42
|||||||||||||||||||||||||
Sbjct: 7 tgatagccaaggatgacttgcctgt 31
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgatagccaaggatgacttgcctgt 42
|||||||||||||||||||||||||
Sbjct: 7 tgatagccaaggatgacttgcctgt 31
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 tgtttgatagccaaggatgacttgcctg 41
|||||| |||||||||||||||||||||
Sbjct: 123 tgtttggtagccaaggatgacttgcctg 96
>RF00865;MIR169_5;BT061088.1/1092-1244 4577:Zea mays
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 19 gatagccaaggatgacttgcctgt 42
||||||||||||||||||||||||
Sbjct: 136 gatagccaaggatgacttgcctgt 113
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 19 gatagccaaggatgacttgcctgt 42
||||||||||||||||||||||||
Sbjct: 135 gatagccaaggatgacttgcctgt 112
>RF00865;MIR169_5;ABXC01000010.1/150949-151088 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tttgatagccaaggatgacttgcctgta 43
|||||||||||||||||| |||||||||
Sbjct: 125 tttgatagccaaggatgatttgcctgta 98
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 19 gatagccaaggatgacttgcctgt 42
||||||||||||||||||||||||
Sbjct: 157 gatagccaaggatgacttgcctgt 134
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 tgtttgatagccaaggatgacttgcctg 41
|||||| |||||||||||||||||||||
Sbjct: 7 tgtttggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ttgtttgatagccaaggatgacttgcct 40
||||||| ||||||||||||||||||||
Sbjct: 6 ttgtttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01000010.1/151081-150955 4558:Sorghum
bicolor (sorghum)
Length = 127
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tttgatagccaaggatgacttgcctgta 43
|||||||||||||||||| |||||||||
Sbjct: 9 tttgatagccaaggatgatttgcctgta 36
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 gatagccaaggatgacttgcctgt 42
||||||||||||||||||||||||
Sbjct: 11 gatagccaaggatgacttgcctgt 34
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 gatagccaaggatgacttgcctgt 42
||||||||||||||||||||||||
Sbjct: 11 gatagccaaggatgacttgcctgt 34
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 16 tttgatagccaaggatgacttgcctgt 42
|||| ||||||||||||||||||||||
Sbjct: 153 tttggtagccaaggatgacttgcctgt 127
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 gtttgatagccaaggatgacttgcctg 41
||||| |||||||||||||||||||||
Sbjct: 145 gtttggtagccaaggatgacttgcctg 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 113 ccttggctaacctgacaggctcttct 138
|||||||||| |||||||||||||||
Sbjct: 29 ccttggctaatctgacaggctcttct 4
>RF00865;MIR169_5;AASG02002697.1/23918-24046 3988:Ricinus communis
(castor bean)
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 5 aaagagtcttgtttgatagccaaggatgacttgcc 39
|||||||||| |||| |||||||||||||||||||
Sbjct: 126 aaagagtctt-tttgttagccaaggatgacttgcc 93
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 tgatagccaaggatgacttgcct 40
|||||||||||||||||||||||
Sbjct: 110 tgatagccaaggatgacttgcct 88
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 21 tagccaaggatgacttgcctgta 43
|||||||||||||||||||||||
Sbjct: 137 tagccaaggatgacttgcctgta 115
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tttgatagccaaggatgacttgcctgt 42
|||| ||||||||||||||||||||||
Sbjct: 7 tttggtagccaaggatgacttgcctgt 33
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcc 39
|||| |||||| |||||||||||||||||||
Sbjct: 1 agtcgtgtttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcc 39
|||| |||||| |||||||||||||||||||
Sbjct: 1 agtcgtgtttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 gtttgatagccaaggatgacttgcctg 41
||||| |||||||||||||||||||||
Sbjct: 8 gtttggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tagccaaggatgacttgcctgta 43
|||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctgta 35
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 cttgtttgatagccaaggatgacttgcctg 41
||||| || |||||||||||||||||||||
Sbjct: 129 cttgtgtggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tttgatagccaaggatgacttgcctg 41
|||| |||||||||||||||||||||
Sbjct: 151 tttggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tttgatagccaaggatgacttgcctg 41
|||| |||||||||||||||||||||
Sbjct: 151 tttggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 gtttgatagccaaggatgacttgcct 40
||||| ||||||||||||||||||||
Sbjct: 127 gtttggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;AARH01002590.1/191263-191135 3694:Populus
trichocarpa
Length = 129
Score = 44.1 bits (22), Expect = 5e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 6 aagagtcttgtttgatagccaaggatgacttgcc 39
|||||||||||||| |||||||||| ||||||||
Sbjct: 125 aagagtcttgtttg-tagccaaggacgacttgcc 93
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 cttgtttgatagccaaggatgacttgcctg 41
||||| || |||||||||||||||||||||
Sbjct: 121 cttgtgtggtagccaaggatgacttgcctg 92
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 113 tagccaaggatgacttgcctgt 92
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 128 tagccaaggatgacttgcctgt 107
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 108 tagccaaggatgacttgcctgt 87
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 121 tagccaaggatgacttgcctgt 100
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 124 tagccaaggatgacttgcctgt 103
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana
(thale cress)
Length = 152
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tttgatagccaaggatgacttgcctg 41
|||| |||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 cttgtttgatagccaaggatgacttgcctg 41
||||| || |||||||||||||||||||||
Sbjct: 3 cttgtgtggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tttgatagccaaggatgacttgcctg 41
|||| |||||||||||||||||||||
Sbjct: 7 tttggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 gtttgatagccaaggatgacttgcct 40
||||| ||||||||||||||||||||
Sbjct: 10 gtttggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;AARH01000472.1/145217-145339 3694:Populus
trichocarpa
Length = 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 9 agtcttgtttgatagccaaggatgacttgcctgt 42
||||||||| | |||||||||| |||||||||||
Sbjct: 1 agtcttgttagttagccaaggacgacttgcctgt 34
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 cttgtttgatagccaaggatgacttgcctg 41
||||| || |||||||||||||||||||||
Sbjct: 4 cttgtgtggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 14 tagccaaggatgacttgcctgt 35
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 16 tagccaaggatgacttgcctgt 37
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 14 tagccaaggatgacttgcctgt 35
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 14 tagccaaggatgacttgcctgt 35
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tagccaaggatgacttgcctgt 42
||||||||||||||||||||||
Sbjct: 9 tagccaaggatgacttgcctgt 30
