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BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00695;MIR398;AASG02014986.1/899-1036 3988:Ricinus communis
           (castor bean)
          Length = 138

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 84  atgtgttctcaggtcgcccctgcagggctttc 115
           ||||||||||||||||||||||| ||||||||
Sbjct: 107 atgtgttctcaggtcgcccctgccgggctttc 138

>RF00695;MIR398;AARH01000462.1/173558-173473 3694:Populus
           trichocarpa
          Length = 86

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 84  atgtgttctcaggtcgcccctgcagggctt 113
           ||||||||||||||||||||||| ||||||
Sbjct: 55  atgtgttctcaggtcgcccctgccgggctt 84

>RF00695;MIR398;CU223654.1/49-129 80863:Populus tremula x Populus
           alba
          Length = 81

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 84  atgtgttctcaggtcgcccctgcagggct 112
           ||||||||||||||||||||||| |||||
Sbjct: 50  atgtgttctcaggtcgcccctgccgggct 78

>RF00695;MIR398;AC146941.8/124295-124199 3880:Medicago truncatula
           (barrel medic)
          Length = 97

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 84  atgtgttctcaggtcgcccctgc 106
           |||||||||||||||||||||||
Sbjct: 66  atgtgttctcaggtcgcccctgc 88

>RF00695;MIR398;AM426431.2/9842-9931 29760:Vitis vinifera
          Length = 90

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 84  atgtgttctcaggtcgcccctgc 106
           |||||||||||||||||||||||
Sbjct: 59  atgtgttctcaggtcgcccctgc 81

>RF00695;MIR398;ABIM01009168.1/9183-9310 3649:Carica papaya (papaya)
          Length = 128

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  tgtgttctcaggtcgcccctgc 106
           ||||||||||||||||||||||
Sbjct: 98  tgtgttctcaggtcgcccctgc 119

>RF00695;MIR398;CU225561.1/49-129 80863:Populus tremula x Populus
           alba
          Length = 81

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 87  tgttctcaggtcgcccctgcagggct 112
           |||||||||||||||||||| |||||
Sbjct: 53  tgttctcaggtcgcccctgccgggct 78

>RF00695;MIR398;AP005783.3/58390-58303 39947:Oryza sativa Japonica
           Group
          Length = 88

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  tgtgttctcaggtcgcccctgc 106
           ||||||||||||||||||||||
Sbjct: 58  tgtgttctcaggtcgcccctgc 79