miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00648;MIR396;AP008208.1/34306506-34306365 39947:Oryza sativa
           Japonica Group
          Length = 142

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 150 tcaagaaatctgtgggaagaaatggca 176
           |||||||| ||||||||||||||||||
Sbjct: 115 tcaagaaagctgtgggaagaaatggca 141




>RF00648;MIR396;ABXC01002982.1/36897-37040 4558:Sorghum bicolor
           (sorghum)
          Length = 144

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 144 agaagttcaagaaatctgtgggaagaaatg 173
           ||||| |||||||| |||||||||||||||
Sbjct: 111 agaaggtcaagaaagctgtgggaagaaatg 140