miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AARH01003347.1/64815-64952 3694:Populus
           trichocarpa
          Length = 138

 Score =  234 bits (118), Expect = 2e-61
 Identities = 118/118 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgctgttttctagccaaggatgacttgctcgttagcccttgaaagatgtttcaaatttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgctgttttctagccaaggatgacttgctcgttagcccttgaaagatgtttcaaatttag 70

                                                                     
Query: 61  gctgcatatgctcagaacctttttctggcttcaggcaatcatcttggctaaatgacag 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  gctgcatatgctcagaacctttttctggcttcaggcaatcatcttggctaaatgacag 12




>RF00645;MIR169_2;AARH01003347.1/64945-64821 3694:Populus
           trichocarpa
          Length = 125

 Score =  234 bits (118), Expect = 2e-61
 Identities = 118/118 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgctgttttctagccaaggatgacttgctcgttagcccttgaaagatgtttcaaatttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   tgctgttttctagccaaggatgacttgctcgttagcccttgaaagatgtttcaaatttag 62

                                                                     
Query: 61  gctgcatatgctcagaacctttttctggcttcaggcaatcatcttggctaaatgacag 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  gctgcatatgctcagaacctttttctggcttcaggcaatcatcttggctaaatgacag 120