miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AARH01002590.1/191056-190914 3694:Populus
trichocarpa
Length = 143
Score = 244 bits (123), Expect = 2e-64
Identities = 123/123 (100%)
Strand = Plus / Minus
Query: 1 tcttgtttagtagccatggatgaattgcctgcttccaaaatgaggtgtcaagccgagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tcttgtttagtagccatggatgaattgcctgcttccaaaatgaggtgtcaagccgagata 75
Query: 61 aacatacaagtttgatccctcattggggttcccaggcagtcatcagcttggctaacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aacatacaagtttgatccctcattggggttcccaggcagtcatcagcttggctaacttga 15
Query: 121 cag 123
|||
Sbjct: 14 cag 12
>RF00645;MIR169_2;AARH01002590.1/190921-191050 3694:Populus
trichocarpa
Length = 130
Score = 244 bits (123), Expect = 2e-64
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 1 tcttgtttagtagccatggatgaattgcctgcttccaaaatgaggtgtcaagccgagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tcttgtttagtagccatggatgaattgcctgcttccaaaatgaggtgtcaagccgagata 62
Query: 61 aacatacaagtttgatccctcattggggttcccaggcagtcatcagcttggctaacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aacatacaagtttgatccctcattggggttcccaggcagtcatcagcttggctaacttga 122
Query: 121 cag 123
|||
Sbjct: 123 cag 125
>RF00865;MIR169_5;AARH01004262.1/629-776 3694:Populus trichocarpa
Length = 148
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 64 atacaagtttgatccctcattggggttcccaggcagtcatcagcttggctaacttgacag 123
||||||||| | |||||| | | || ||||||||| ||||||||||| ||||| ||||||
Sbjct: 74 atacaagttagttccctcgtcgaggctcccaggcaatcatcagcttgactaacatgacag 15
