miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 7e-22
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 28 attataagattttctagcattgtctacattcatatataggtgcctagattcattaacatc 87
||||||||| |||||||||||| | |||||||||||| ||||||||||| ||||||||
Sbjct: 117 attataagactttctagcattgcccacattcatatatgtatgcctagattcgttaacatc 58
Query: 88 tatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagtatat 143
||||||||||||| |||| || ||||| |||||| | ||||||||| |||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtatat 2
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 15 gtttcatattataagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/74 (91%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 32 taagattttctagcattgtctacattcatatataggtgcctagattcattaacatctata 91
||||| |||||||||||||| ||||||||||| | || |||||||||||||||||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgt--ctagattcattaacatctata 83
Query: 92 tgaatgtggacaat 105
||||||||||||||
Sbjct: 84 tgaatgtggacaat 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 18 tctgttttatattataagattttctagcattgtctacattcatata 63
||||||| ||| | ||||| |||||||||||||| |||||||||||
Sbjct: 125 tctgtttcataatgtaagactttctagcattgtccacattcatata 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 83 acatctatatgaatgtggacaat 105
|||||||||||||||||||||||
Sbjct: 62 acatctatatgaatgtggacaat 40
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 89.7 bits (45), Expect = 1e-17
Identities = 104/123 (84%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatatata---ggtgcctagatt 77
|||| ||||||||||| |||||||||||||| ||||||||||| | ||| |||||||
Sbjct: 127 gtttcatattataagactttctagcattgtccacattcatatagatgttgtgtctagatt 68
Query: 78 cattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggta 137
|||||||||||| |||||||||||||| || ||||| |||||| | ||||||||| |
Sbjct: 67 tattaacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaacggaggga 8
Query: 138 gta 140
|||
Sbjct: 7 gta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 82 aacatctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagtat 141
|||||||||||||||||||||||| || ||||| |||||| | ||||||||| |||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagtat 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattca 59
|||| ||||||||||| |||||||||||||| |||||||
Sbjct: 15 gtttcatattataagactttctagcattgtccacattca 53
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 27 tattataagattttctagcattgtctacattcatatataggt-gcctagattcattaaca 85
|||||||||| ||||||||||| | ||||||||||||| || | |||||||||||||||
Sbjct: 21 tattataagactttctagcattacccacattcatatatatgttgtctagattcattaaca 80
Query: 86 tctatatgaatgtggacaatattaaaaagttttataa 122
| |||||||||||||||||| || ||||| ||||||
Sbjct: 81 tatatatgaatgtggacaatgctagaaagtcttataa 117
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 18 tctgttttatattataagattttctagcattgtctacattcatatata 65
||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 128 tctgtttcatattataagactttctagcattgtccacattcatatata 81
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 87.7 bits (44), Expect = 4e-17
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatataggtgcctagattcat 80
|||| ||| ||||||| |||||||||||| | |||| ||||||| ||| |||||||||
Sbjct: 15 gtttcataatataagactttctagcattgcccacatctatatatatgtgtttagattcat 74
Query: 81 taacatctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagta 140
|||||||||||| |||||| |||| ||| ||||| ||||| ||||||||||||||||
Sbjct: 75 taacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacggaggtagta 134
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtggacaatattaaaaagttt 117
|||||||| ||||| |||||||||||||| ||||||||||||| |||| || ||||| |
Sbjct: 76 catatatatgtgccaagattcattaacatatatatgaatgtgggcaatgctagaaagtct 135
Query: 118 tataacctaaaacggaggtagta 140
|||||| | ||||||||||||||
Sbjct: 136 tataacttgaaacggaggtagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaac 130
||||||| |||||||| ||||||||||||| |||| | ||||| ||||||| | ||||
Sbjct: 74 ctagatttattaacatatatatgaatgtgggcaatgccagaaagtcttataacttgaaac 15
Query: 131 ggaggtagtat 141
||||| |||||
Sbjct: 14 ggaggaagtat 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 29 ttataagattttctagcattgtctacattcatatata 65
|||||||| |||||||||||| | |||||||||||||
Sbjct: 140 ttataagactttctagcattgcccacattcatatata 104
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 6e-16
Identities = 102/123 (82%), Gaps = 8/123 (6%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatataggtgcctagattcat 80
|||| |||||||||||||||||||||||| | |||||||| | ||||||||||
Sbjct: 15 gtttcatattataagattttctagcattgcccacattcatgt--------ctagattcat 66
Query: 81 taacatctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagta 140
|||||||||||||||||||| |||| || ||||| |||||| | ||||||||| ||||
Sbjct: 67 taacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 126
Query: 141 tat 143
|||
Sbjct: 127 tat 129
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 116 gtttcatattataagactttctagcattgcccacattcatata 74
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatataggtgcctagattcat 80
|||| ||||| ||||| ||||||||||||| ||||||||||| | || ||||||| ||
Sbjct: 15 gtttcatattgtaagactttctagcattgttcacattcatatagatatgtctagatttat 74
Query: 81 taacatctatatgaatgtggacaat 105
|||||||||||||||||||| ||||
Sbjct: 75 taacatctatatgaatgtgggcaat 99
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 87/102 (85%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatataggtgcctagattcat 80
|||| ||||||||||| |||||||||||| | ||||||| || | ||| |||||||||
Sbjct: 15 gtttcatattataagactttctagcattgcccacattcacatgt--gtgtttagattcat 72
Query: 81 taacatctatatgaatgtggacaatattaaaaagttttataa 122
|||||||||||||||||||| |||| || ||||| ||||||
Sbjct: 73 taacatctatatgaatgtgggcaatgctagaaagtcttataa 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 122 gtttcatattataagactttctagcattgcccacattcatata 80
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 59 atatataggtgcctagattcattaacatctatatgaatgtggacaat 105
||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 53 atatatatgtgcctagattcattaacatctatatgaatgtgggcaat 99
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||| ||||||||||||| ||||
Sbjct: 50 ctagattcattaacatatatatgaatgtgggcaat 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 31 ataagattttctagcattgtctacattcatatata 65
|||||| |||||||||||| | |||||||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatata 35
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaac 130
|||||||||||||||||||||||||||||| |||| || ||||| |||||| || ||||
Sbjct: 90 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaac 149
Query: 131 ggaggtagta 140
||||| ||||
Sbjct: 150 ggagggagta 159
Score = 50.1 bits (25), Expect = 9e-06
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 59 atatataggtgcctagattcatt-aacatctatatgaatgtggacaatattaaaaagttt 117
|||| |||||| ||||||| ||| ||||||||||||||||||| ||| || ||||| |
Sbjct: 87 atatgtaggtgtctagattaatttaacatctatatgaatgtgggtaatgctagaaagtct 28
Query: 118 tataacctaaaacggaggtagtata 142
||||| | ||||||||| ||||||
Sbjct: 27 tataatatgaaacggagggagtata 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 28 attataagattttctagcattgtctacattcatata 63
||||||||| |||||||||||| | |||||||||||
Sbjct: 142 attataagactttctagcattgcccacattcatata 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| ||||||||||| | |||||||||||
Sbjct: 15 gtttcatattataagactttctagcattacccacattcatata 57
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 89 ctagattcattaacatctatatgaatgtggacaatcctaaaaagt 133
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagttttata 121
|||| ||||||||||||||||||||| ||| ||||| || ||||| |||||
Sbjct: 74 ctaggttcattaacatctatatgaatatgggcaatactagaaagtcttata 24
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaacg 131
||||||||||||||||||||||||||||| |||| || ||||| |||||| | |||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 132 gaggtagtatatt 144
|||| ||||||||
Sbjct: 13 gaggaagtatatt 1
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaacg 131
||||||||||||||||||||||||||||| |||| || ||||| |||||| | |||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 132 gaggtagtatat 143
|||| |||||||
Sbjct: 152 gagggagtatat 163
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 15 gtttcatattataagactttctagcattgcccacattcatata 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 150 gtttcatattataagactttctagcattgcccacattcatata 108
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatataggtgcctagattcat 80
|||| ||||||||||| ||||||| ||| | ||||||||||||| || ||||||||||
Sbjct: 15 gtttcatattataagactttctagtattacccacattcatatatatgt--ctagattcat 72
Query: 81 taacatctatatgaatgtgg 100
|||||| |||||||||||||
Sbjct: 73 taacatatatatgaatgtgg 92
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 28 attataagattttctagcattgtctacattcatatata 65
||||||||| ||||||||||| | |||||||||||||
Sbjct: 115 attataagactttctagcattacccacattcatatata 78
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatctatatgaatgtggacaatcctaaaaagt 30
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagttttata 121
|||| ||||||||||||||||||||| ||| ||||| || ||||| |||||
Sbjct: 89 ctaggttcattaacatctatatgaatatgggcaatactagaaagtcttata 139
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 103/125 (82%), Gaps = 4/125 (3%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatataggt----gcctagat 76
|||||||||||||||| | ||||| |||| | ||||||||||||| | | ||||||
Sbjct: 15 gttttatattataagactatctagtattgcccacattcatatatatatatatgtctagat 74
Query: 77 tcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggt 136
|||||| ||||||||||||||||| |||| || ||||| |||||| | |||||||||
Sbjct: 75 tcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggaggg 134
Query: 137 agtat 141
|||||
Sbjct: 135 agtat 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 88 tatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagtatat 143
||||||||||||| ||||| || | ||| |||||| ||||||||||| |||||||
Sbjct: 57 tatatgaatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||| ||||| | |||||||||||
Sbjct: 128 gtttcatattataagactttctatcattgcccacattcatata 86
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 86/102 (84%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatataggtgcctagattcat 80
|||| ||||||||||| |||||||||||| | ||||||| | | ||| |||||||||
Sbjct: 15 gtttcatattataagactttctagcattgcccacattcacgtgt--gtgtttagattcat 72
Query: 81 taacatctatatgaatgtggacaatattaaaaagttttataa 122
|||||||||||||||||||| |||| || ||||| ||||||
Sbjct: 73 taacatctatatgaatgtgggcaatgctagaaagtcttataa 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 122 gtttcatattataagactttctagcattgcccacattcatata 80
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 67 gtgcctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaat 99
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||| ||||||||||||||||||
Sbjct: 50 ctagattcattaacatatatatgaatgtggacaat 16
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 31 ataagattttctagcattgtctacattcatatata 65
|||||| |||||||||||||| |||||||||||||
Sbjct: 1 ataagactttctagcattgtccacattcatatata 35
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 74 gattcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaacgga 133
|||||||||||||||||||||||||||||| | || ||||| ||||| ||| |||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacgga 132
Query: 134 ggtagta 140
|| ||||
Sbjct: 133 ggaagta 139
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 84 catctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagta 140
||||||||||||| |||||| | || ||||| ||||||||| ||||||||| ||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataacctgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 30 tataagattttctagcattgtctacattcatata 63
||||||| ||||||||| |||| |||||||||||
Sbjct: 120 tataagactttctagcactgtccacattcatata 87
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtgg 100
|||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 63 catatatatgtgtctagattcattaacatctatatgaatgtgg 21
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||| |||||||||||||||||
Sbjct: 65 ctagattcatttacatctatatgaatgtg 93
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 39 ttctagcattgtctacattcatatataggtgcctagattcattaacatctatatgaatgt 98
|||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 33 ttctagcattacctatattcatatatatgt--ctagattcattaacatctatatgaatgt 90
Query: 99 g 99
|
Sbjct: 91 g 91
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 68 tgcctagattcattaacatctatatgaatgtggacaat 105
||||||||||||||| ||||||||||||||||||||||
Sbjct: 77 tgcctagattcattagcatctatatgaatgtggacaat 40
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
||||||||||||||||| |||||||||||||
Sbjct: 89 ctagattcattaacatcaatatgaatgtgga 119
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 68 tgcctagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 tgcctagattcattaacatctatatgaatgtgggcaat 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 68 tgcctagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||||| ||||||||| ||| ||||
Sbjct: 53 tgcctagattcattaacatatatatgaatatgggcaat 16
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 75 attcattaacatctatatgaatgtggacaatattaaaaagtttta 119
|||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagtttta 121
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
|||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 89 ctagattcattaacatctatatgaatgtgggcaatactagaaagt 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 58 catatataggtgcctagattcattaacatctatatgaat 96
||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 87 catatatgcgtgtctaaattcattaacatctatatgaat 49
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaa 104
|||||||||||||||||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaa 122
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||||| ||||||
Sbjct: 74 ctagattcattaacatctatatgaatgtagacaat 40
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 32 taagattttctagcattgtctacattcatata 63
||||| ||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattgtctacattcatata 57
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
|||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 89 ctagattcattaacatctatgtgaatgtgggcaatgttaaaaagt 133
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
|||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 59 atatataggtgcctagattcattaacatctatatgaatgtg 99
|||||||| || |||||||||||||||||||||||||||||
Sbjct: 86 atatatagatgtctagattcattaacatctatatgaatgtg 46
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
||||||||| |||||||||||||||||||
Sbjct: 90 tagattcatcaacatctatatgaatgtgg 118
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaata 106
|||||||||||||||||||||||||||||| |||||
Sbjct: 74 ctagattcattaacatctatatgaatgtgggcaata 39
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 catatataggtgcctagattcattaacatctatatgaat 96
|||||||| ||| ||||||||||||||||||||||||||
Sbjct: 76 catatatatgtgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
||||||| |||||||||||||||||||||||||||
Sbjct: 68 ctagatttattaacatctatatgaatgtggacaat 102
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||||||| ||||
Sbjct: 74 ctagattcattaacatctatatgaatgtgggcaat 40
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||||||| ||||
Sbjct: 74 ctagattcattaacatctatatgaatgtgggcaat 40
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||||| ||||||
Sbjct: 87 ctagattcattaacatctagatgaat 112
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||| ||||||||||||||||||||||||||
Sbjct: 39 ctagattcgttaacatctatatgaatgtggacaat 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 32 taagattttctagcattgtctacattcatata 63
||||| |||||||||||||| |||||||||||
Sbjct: 87 taagactttctagcattgtccacattcatata 56
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||| ||||||||||||||||||
Sbjct: 87 ctagattcattaacatttatatgaatgtggacaat 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 32 taagattttctagcattgtctacattcatata 63
||||| |||||||||||||| |||||||||||
Sbjct: 135 taagactttctagcattgtccacattcatata 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 70 cctagattcattaacatctatatgaat 96
|||||||||||||||||| ||||||||
Sbjct: 75 cctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
||||||| |||||||||||||||||||||||||||
Sbjct: 71 ctagatttattaacatctatatgaatgtggacaat 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 32 taagattttctagcattgtctacattcatata 63
||||| |||||||||||||| |||||||||||
Sbjct: 119 taagactttctagcattgtccacattcatata 88
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatatta 109
||||||||||||||||| ||||||||||||| |||||||
Sbjct: 88 ctagattcattaacatcaatatgaatgtggaaaatatta 126
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||| ||| ||||||||||||
Sbjct: 73 ctagattcattaatatcaatatgaatgtgg 44
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 59 atatataggtgcctagattcattaacatctatatgaatgtgga 101
|||||||| || ||||||||||||||| |||||||||||||||
Sbjct: 77 atatatagatgtctagattcattaacacctatatgaatgtgga 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||| ||||||||||||||
Sbjct: 74 ctagattcattaacacctatatgaatgtgg 45
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 59 atatataggtgcctagattcattaacatctatatgaatgtgga 101
|||||||| || ||||||||||||||| |||||||||||||||
Sbjct: 56 atatatagatgtctagattcattaacacctatatgaatgtgga 14
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||| ||||||||||||||
Sbjct: 59 ctagattcattaacacctatatgaatgtgg 88
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtggacaatattaaaaagttttataa 122
||||||||||||||||||||||||||||| |||| || ||||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaattctagaaagtcttataa 23
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||||||||||||||| ||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaat 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 18 tctgttttatattataagattttctagcattgtctacattcatata 63
||||||| ||||||||||| ||||||| |||| | |||||||||||
Sbjct: 12 tctgtttcatattataagactttctagaattgcccacattcatata 57
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||||||| ||||
Sbjct: 89 ctagattcattaacatctatatgaatgtgggcaat 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
|||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
||||||| |||||||||||||||||||||||||||
Sbjct: 74 ctagatttattaacatctatatgaatgtggacaat 40
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 32 taagattttctagcattgtctacattcatata 63
||||| |||||||||||||| |||||||||||
Sbjct: 26 taagactttctagcattgtccacattcatata 57
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||||||| ||||
Sbjct: 74 ctagattcattaacatctatatgaatgtgggcaat 40
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtg 99
|||||||||||||||||||||||||||||
Sbjct: 89 ctagattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 75 attcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaacggag 134
||||||||||||||| |||||||| | |||||||||||||| ||| | ||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgtaaaacggag 11
Query: 135 gtagta 140
| ||||
Sbjct: 10 gaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtg 99
|||||||||||||||||||||| |||||
Sbjct: 90 tagattcattaacatctatatgtatgtg 117
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaac 130
||||||||||| |||| ||||||||||||| |||| ||| ||||| |||||| | ||||
Sbjct: 74 ctagattcattgacatatatatgaatgtgggcaatgttagaaagtcttataatatgaaac 15
Query: 131 ggaggtagta 140
||||| ||||
Sbjct: 14 ggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtggacaatattaaaaagttt 117
|||||||| ||| |||||||||| ||||||||||||| |||||||| || ||||| |
Sbjct: 76 catatatatgtgtttagattcattgacatctatatgaagatggacaattctagaaagtct 135
Query: 118 tataacctaaaacggaggtagta 140
||||| | ||||||||| ||||
Sbjct: 136 tataatatgaaacggagggagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatata 65
|||| ||||||||||| |||||| ||||| | |||||||||||||
Sbjct: 15 gtttcatattataagactttctaacattgcccacattcatatata 59
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagttttataacctaaaac 130
|||||||||||| ||||||||||||||||| |||| || ||||| |||||| | ||||
Sbjct: 89 ctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 148
Query: 131 ggaggtagta 140
||||| ||||
Sbjct: 149 ggaggaagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtggacaatattaaaaagttt 117
|||||||| ||| ||| ||||||||||||||||||| ||||| |||| || ||||| |
Sbjct: 87 catatatatgtgtataggttcattaacatctatatgattgtgggcaatgctagaaagtct 28
Query: 118 tataacctaaaacggaggtagtat 141
||||| | ||||||||| |||||
Sbjct: 27 tataatatgaaacggagggagtat 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 148 gtttcatattataagactttctagcattgcccacattcatata 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | ||| |||||||
Sbjct: 15 gtttcatattataagactttctagcattgcccacaatcatata 57
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattgtctacattcatat--ataggtgcctagattcattaacatctatatgaat 96
|||||||||||||||||||||||| ||| | ||||||||||||| ||||||||| ||
Sbjct: 108 ttctagcattgtctacattcatatagatataagtctagattcattaatatctatatgcat 49
Query: 97 gtggacaatatta 109
||| ||||||||
Sbjct: 48 atgggcaatatta 36
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||||||||||||||| ||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaat 105
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
||||||||||||||||| |||||||||||| |||| ||| |||||
Sbjct: 67 ctagattcattaacatccatatgaatgtgggcaatgttagaaagt 111
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||| |||||||||||| ||||
Sbjct: 46 ctagattcattaacatccatatgaatgtgggcaat 12
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatatata 65
|||| ||||||||||| |||||||||||| | |||||||||||||
Sbjct: 15 gtttcatattataagactttctagcattgcccacattcatatata 59
Score = 56.0 bits (28), Expect = 1e-07
Identities = 93/115 (80%), Gaps = 6/115 (5%)
Strand = Plus / Minus
Query: 26 atattataagattttctagcattgtctacattcatatataggtgcctagattcattaaca 85
||||||||||| |||||||||||||| ||||||| || ||||||||||||||
Sbjct: 113 atattataagactttctagcattgtc------catatattcatgtctagattcattaacg 60
Query: 86 tctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagta 140
| ||||||||||||| |||| || ||||| |||||| | ||||||||| ||||
Sbjct: 59 tatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
|||||||||||||||||||||||||| ||| ||||| || |||||
Sbjct: 89 ctagattcattaacatctatatgaatatgggcaatactagaaagt 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 58 catatataggtgcctagattcattaacatctatatgaat 96
||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 87 catatatgcgtgtctaaattcattaacatctatatgaat 49
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgg 45
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatatata 65
|||| ||||||||||| |||||||||||| | |||||||||||||
Sbjct: 118 gtttcatattataagactttctagcattgcccacattcatatata 74
Score = 56.0 bits (28), Expect = 1e-07
Identities = 93/115 (80%), Gaps = 6/115 (5%)
Strand = Plus / Plus
Query: 26 atattataagattttctagcattgtctacattcatatataggtgcctagattcattaaca 85
||||||||||| |||||||||||||| ||||||| || ||||||||||||||
Sbjct: 20 atattataagactttctagcattgtc------catatattcatgtctagattcattaacg 73
Query: 86 tctatatgaatgtggacaatattaaaaagttttataacctaaaacggaggtagta 140
| ||||||||||||| |||| || ||||| |||||| | ||||||||| ||||
Sbjct: 74 tatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 128
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
|||||||||||| ||||||||||||||||| |||| ||| |||||
Sbjct: 89 ctagattcattagcatctatatgaatgtgggcaatgttagaaagt 133
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaatattaaaa 112
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaa 102
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 73 agattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||||| ||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaat 40
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 11 tactttatctgttttatattataagattttctagcattgtctacattcatatataggt-- 68
|||||| || |||| ||| | ||||| |||||||||||| | ||||| ||||| | ||
Sbjct: 5 tactttctccgtttcataatgtaagactttctagcattgcccacatttatatagatgtta 64
Query: 69 -gcctagattcattaacatctatatgaatgtggacaat 105
| |||||||||||||||||||||| ||| ||||||||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaat 102
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtggacaat 105
||||||| |||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 76 catatatgtgtgcctagattcattagcatatatatgaatgtgggcaat 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 taagattttctagcattgtctacattcatatata 65
||||| |||||||||||| | |||||||||||||
Sbjct: 137 taagactttctagcattgcccacattcatatata 104
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtg 99
||||||||||||||||||||||||||||
Sbjct: 88 tagattcattaacatctatatgaatgtg 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 74 gattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||
Sbjct: 71 gattcattaacatctacatgaatgtgg 45
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgt 98
||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaatgt 47
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaa 110
|||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 40 ctagattcattaacatatatatgaatgtgggcaatgttaa 1
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||| ||||||||||||| ||||
Sbjct: 51 ctagattcattaacatatatatgaatgtgggcaat 85
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 75 attcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||||||| ||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaat 40
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
||||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatctaaatgaatgtgga 44
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
||||||||||||||||| |||||||||||||
Sbjct: 61 ctagattcattaacatcaatatgaatgtgga 91
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||||||||| |||||| ||||
Sbjct: 63 ctagattcattaacatctatatgcatgtgggcaat 97
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtgg 100
||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 87 catatatgtgtgtctagattcattaacatatatatgaatgtgg 45
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaatattaaaaagt 115
|||||||||| | |||||||||||||||| |||| ||||||||
Sbjct: 90 tagattcattgatatctatatgaatgtgggcaatgctaaaaagt 133
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 75 attcattaacatctatatgaatgtggacaatattaaaaagttttata 121
|||||||| ||| ||||||||||||||||||| || ||||| |||||
Sbjct: 70 attcattagcatttatatgaatgtggacaatactagaaagtcttata 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||| ||||||| ||||||| |||||| |||||||||||
Sbjct: 15 gtttcatactataagactttctagtattgtccacattcatata 57
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||||||||| |||||| ||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaat 112
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| |||||||||||| | |||||||||||
Sbjct: 15 gtttcatattataagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
||||||||||||||||| |||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgga 44
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtgg 100
|||||||| ||| |||||||||||||||||| ||||||||||
Sbjct: 87 catatatatgtgtttagattcattaacatctaaatgaatgtgg 45
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
||||||||||||||||| |||||||||||||
Sbjct: 70 ctagattcattaacatcaatatgaatgtgga 100
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 89 tagattcattaacatcaatatgaatgtgg 117
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaat 49
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
|||||||||||| |||||||||||||
Sbjct: 71 ctagattcattagcatctatatgaat 96
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 75 ctagattcattaacatcaatatgaatgtgg 46
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgga 101
|||||||||||||||| |||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgga 101
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgga 101
|||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgga 44
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaatattaaaaagttttata 121
|||||| ||||||||||| ||||||||| |||||||| ||||| |||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttata 105
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||||||||||||
Sbjct: 89 ctagattcattaacatctatatgaat 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 75 attcattaacatctatatgaatgtggacaat 105
||||||||||||||||||| |||||| ||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaat 40
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgga 101
|||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgga 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||| |||||||||||| ||||||||||||
Sbjct: 77 ctagtttcattaacatcaatatgaatgtgg 106
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 77 ctagattcattaacatcaatatgaat 102
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 73 agattcattaacatctatatgaatgtggacaata 106
||||||||||||||||| || |||||||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaata 84
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaat 105
||||||||||| ||||||||||||||||| ||||
Sbjct: 90 tagattcattaccatctatatgaatgtgggcaat 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatg 93
|||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatg 52
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 89 ctagattcattaacatcaatatgaatgtgg 118
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 80 ctagattcattaacatcaatatgaatgtgg 109
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||||||||||||
Sbjct: 89 ctagattcattaacatctatatgaat 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatccatatgaatgtg 46
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||| || ||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaat 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||| ||| ||||||||||
Sbjct: 74 ctagattcattaacaactaaatgaatgtgg 45
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 77 ctagattcattaacatcaatatgaatgtgg 106
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 63 ctagattcattaacatcaatatgaatgtgg 92
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 48 ctagattcattaacatcaatatgaatgtg 20
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatg 97
||||||||||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatg 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 62 tataggtgcctagattcattaacatctatatgaatgtggacaat 105
|||| ||| |||||||||||| ||||||| ||||||||| ||||
Sbjct: 83 tatatgtgtctagattcattagcatctatgtgaatgtgggcaat 40
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 89 ctagattcattaacatcaatatgaatgtgg 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgga 101
|||||||||||||||| |||||||| ||||
Sbjct: 73 tagattcattaacatcaatatgaatatgga 44
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 66 ctagattcattaacatcaatatgaatgtgg 95
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 attcattaacatctatatgaatgtggacaatatta 109
||||||||||||| |||||||||||| |||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatatta 127
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 87 ctagattcattaacatcaatatgaatgtgg 116
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 89 ctagattcattaacatccatatgaatgtg 117
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgg 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 89 ctagattcattaacattaatatgaatgtgg 118
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||||| ||||||||||
Sbjct: 74 ctagattcattaacatctaaatgaatgtgg 45
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 67 ctagattcattaacatcaatatgaatgtgg 96
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| ||||||||||||
Sbjct: 48 ctagattcattaacatcaatatgaatgtgg 19
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgg 92
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
||||||||||| ||||||||||||||||| |||| ||| |||||
Sbjct: 68 ctagattcatttgcatctatatgaatgtgggcaatgttagaaagt 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 58 catatataggtgcctagattcattaacatctatatgaatgtggacaat 105
||||||| |||||||||||||||| ||| |||||||||||| ||||
Sbjct: 66 catatatgtgtgcctagattcattagcatagatatgaatgtgggcaat 19
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgg 45
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
||||||||||||||||||| |||||| ||| |||| ||||||||
Sbjct: 89 ctagattcattaacatctaaatgaatatgggcaatgctaaaaagt 133
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||||||||| ||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgg 96
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||||||||| ||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgg 45
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgg 92
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgg 90
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaatattaaaaagt 115
||||||||||||| ||||| || |||||||||||| ||||||||
Sbjct: 87 ctagattcattaatatctaaataaatgtggacaatgctaaaaagt 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/35 (94%), Gaps = 2/35 (5%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||||||||||| |||||||||||
Sbjct: 72 ctagattcattaacatctatat--atgtggacaat 40
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 78 ctagattcattaacatcaatatgaatgtg 106
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgg 100
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 58 ctagattcattaacatcaatatgaatgtg 86
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtg 99
||||||||||||||||| |||||||||||
Sbjct: 61 ctagattcattaacatcaatatgaatgtg 89
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||||||||| ||||||
Sbjct: 30 tagattcattaacatctatatgtatgtgg 2
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgg 100
|||||||||||||||||||||| ||||||
Sbjct: 34 tagattcattaacatctatatgtatgtgg 62
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgt 98
||||||||||||||||| ||||||||||
Sbjct: 54 ctagattcattaacatcaatatgaatgt 81
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 30 tataagattttctagcattgtctacattcatatata 65
||||||| |||||||||||||| | |||||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatatata 51
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
||||||||||||||||| |||||||| ||||
Sbjct: 76 ctagattcattaacatcaatatgaatatgga 106
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 74 gattcattaacatctatatgaatgtgg 100
|||||||||||||| ||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgg 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 gattcattaacatctatatgaatgtg 99
|||||||||||||| |||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtg 100
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
|||||||||||||||| |||||||||||||
Sbjct: 74 ctagattcattaacattaatatgaatgtgga 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||| ||| ||||||||||||
Sbjct: 89 ctagattcattaatatcaatatgaatgtgg 118
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 attcattaacatctatatgaatgtgga 101
|||||||| ||||||||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgga 119
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 48 ctagattcattaacttctatgtgaatgtgggcaat 14
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 94 ctagattcattaacttctatgtgaatgtgggcaat 128
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
|||||| |||||||||| |||||||||||||
Sbjct: 74 ctagatacattaacatcaatatgaatgtgga 44
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 46 ctagattcattaacttctatgtgaatgtgggcaat 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 92 ctagattcattaacttctatgtgaatgtgggcaat 126
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtggacaat 105
||||||||||||||||||| |||||| ||| ||||
Sbjct: 74 ctagattcattaacatctaaatgaatatgggcaat 40
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| ||| ||||||| || |||||||||||
Sbjct: 15 gtttcatattataagactttatagcattatccacattcatata 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 21 gttttatattataagattttctagcattgtctacattcatata 63
|||| ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 104 gtttcatattataagactttctagcattatccacatttatata 62
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gattcattaacatctatatgaatgtgg 100
|||||||||||||| ||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgg 94
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgt 98
||||| |||||||||||||||||||||
Sbjct: 73 tagatccattaacatctatatgaatgt 47
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
|||||||||||||||| |||||||||||||
Sbjct: 89 ctagattcattaacattaatatgaatgtgga 119
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgga 101
||||||||||||||||| ||||| |||||||
Sbjct: 74 ctagattcattaacatcaatatggatgtgga 44
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||| | ||||||||||||
Sbjct: 89 ctagattcattaacaacaatatgaatgtgg 118
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatgtggacaat 105
||||||||||||||| |||||| |||||| ||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaat 40
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 70 ctagattcattaacatcaatatgaat 95
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||| |||||||||| ||||||||||||
Sbjct: 60 ctagatccattaacatcaatatgaatgtgg 89
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| |||| |||||||
Sbjct: 74 ctagattcattaacatcaatataaatgtgg 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||| ||| ||||||||||||
Sbjct: 89 ctagattcattaatatcaatatgaatgtgg 118
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||| ||||| ||||||||||||
Sbjct: 40 ctagattcattgacatcaatatgaatgtgg 11
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||| ||||| ||||||||||||
Sbjct: 49 ctagattcattgacatcaatatgaatgtgg 78
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||| ||| ||||||||||||
Sbjct: 74 ctagattcattaatatcaatatgaatgtgg 45
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||| |||| ||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgg 45
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||| ||| ||||||||||||
Sbjct: 89 ctagattcattaatatcaatatgaatgtgg 118
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||||| || ||||||||||||
Sbjct: 74 ctagattcattaacgtcaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||| ||||| ||||||||||||
Sbjct: 74 ctagattcattgacatcaatatgaatgtgg 45
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||| | ||||||||||||
Sbjct: 74 ctagattcattaacaacaatatgaatgtgg 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||| |||| ||||||||||||
Sbjct: 89 ctagattcattaccatcaatatgaatgtgg 118
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 attcattaacatctatatgaatgtgg 100
||||||||| ||||||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtgg 74
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||| |||||||||| ||||||||||||
Sbjct: 48 ctagatacattaacatcaatatgaatgtgg 19
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||| |||||||||| ||||||||||||
Sbjct: 76 ctagatacattaacatcaatatgaatgtgg 105
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||| |||| ||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgg 103
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||| ||| ||||||||||||
Sbjct: 74 ctagattcattaatatcaatatgaatgtgg 45
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatccatatgaat 49
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
|||||||| |||||||||||||||||
Sbjct: 74 ctagattcgttaacatctatatgaat 49
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||| ||| ||||||||||||
Sbjct: 46 ctagattcattaatatcaatatgaatgtgg 75
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 87 ctagattcattaacatcaatatgaat 112
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| |||||||||||
Sbjct: 93 ctagattcattaacatcactatgaatgtgg 122
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||| ||||| ||||||||||||
Sbjct: 74 ctagattcattgacatcaatatgaatgtgg 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||| ||||| ||||||||||||
Sbjct: 83 ctagattcattgacatcaatatgaatgtgg 112
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 80 ctagattcattaacatcaatatgaat 105
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||| |||| ||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgg 45
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 attcattaacatctatatgaatgtgg 100
||||||||||||| ||||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgg 108
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 79 attaacatctatatgaatgtggacaatattaaaa 112
||||||||| ||||||||||||| |||| |||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaa 33
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||| |||| ||||||||||||
Sbjct: 89 ctagattcattagcatcaatatgaatgtgg 118
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatcactatgaatgtgg 45
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 72 tagattcattaacatctatatgaatgtgga 101
|||||||||||| ||| |||||||||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgga 119
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 71 ctagattcattaacatcaatatgaat 96
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
|||||||||||||||| ||||||||||||
Sbjct: 74 ctagattcattaacataaatatgaatgtgg 45
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 72 tagattcattaacatctatatgaatg 97
|||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 71 ctagattcattaacatctatatgaat 96
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 71 ctagattcattaacatctatatgaatgtgg 100
||||||||||||||||| |||| |||||||
Sbjct: 89 ctagattcattaacatcaatataaatgtgg 118
