miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 125 bits (63), Expect = 1e-28
Identities = 104/118 (88%), Gaps = 6/118 (5%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaa------c 57
|||||||||||||| |||||||||||||||||||| |||||||||||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatgagc 64
Query: 58 atctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
|||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 65 atctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagtagt 122
Score = 107 bits (54), Expect = 3e-23
Identities = 101/117 (86%), Gaps = 6/117 (5%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcattaa------ 56
||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 121 ctactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatgct 62
Query: 57 catctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||| |||||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 109 bits (55), Expect = 8e-24
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||| ||||||||| |||||||||| | |||||||||| |||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcattaacatcaat 64
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
|| |||| || ||||||| || | |||||||||||||||||||| |||||
Sbjct: 65 atgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagtag 115
Score = 77.8 bits (39), Expect = 3e-14
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatcta 62
||||||||||||||| |||||||||| | |||||||||| || |||||||| || |
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 63 tatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|| ||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 55 aatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 107 bits (54), Expect = 3e-23
Identities = 97/111 (87%), Gaps = 4/111 (3%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccaca----ttcattaacat 59
|||| ||||||||| |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattgtccacacagattcattaacat 64
Query: 60 ctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
||| ||| |||||| |||| ||| |||| ||||||||||||||||||||||
Sbjct: 65 ctaaataaatgtggacaatactagaaagccttacattgtgaaacggaggga 115
Score = 69.9 bits (35), Expect = 7e-12
Identities = 92/109 (84%), Gaps = 4/109 (3%)
Strand = Plus / Minus
Query: 9 cctccgttttacaatgtaagactttctagcattgcccacattcattaacatct--at--a 64
||||||||| |||||||||| |||||||| |||| ||||||| ||| | || | || |
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaa 54
Query: 65 tatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
| | ||||| |||||||| |||| |||||||||||||||||||||||||
Sbjct: 53 tctgtgtggacaatgctagaaagccttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 70 attcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||| ||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacat 50
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| ||||| ||||||||||||||||| | ||||||||||
Sbjct: 139 ctacttcctccgttccacaatataagactttctagcattactcacattcatt 88
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 107 bits (54), Expect = 3e-23
Identities = 99/114 (86%)
Strand = Plus / Minus
Query: 1 agctacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatc 60
||||||||||||||||| | | | |||||||||||||||||||||| |||||||| |||
Sbjct: 117 agctacttcctccgtttcatattataagactttctagcattgcccatattcattagcatt 58
Query: 61 tatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||| |||||| |||| ||| ||||||||| | | |||||||||||||||||
Sbjct: 57 tatatgaatgtggacaatactagaaagtcttatagtatgaaacggagggagtag 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 93/113 (82%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacat-ct 61
||||| ||||||||| | | | ||||||||||||| |||| |||||||||| | || ||
Sbjct: 4 ctactccctccgtttcatactataagactttctagtattgtccacattcatataaatgct 63
Query: 62 atatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
| || || |||||||||||| ||||||||| | | ||||||||||| |||||
Sbjct: 64 a-atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagtag 115
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 107 bits (54), Expect = 3e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 82 attcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacggag 141
Query: 108 ggagta 113
||||||
Sbjct: 142 ggagta 147
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgctcacattca 53
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 108 ggagtagt 115
| ||||||
Sbjct: 10 gaagtagt 3
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||| ||||||||| | |||||||||||||||||||||||||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacat 102
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 108 ggagtagt 115
| ||||||
Sbjct: 10 gaagtagt 3
Score = 85.7 bits (43), Expect = 1e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacat 49
||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgcccacat 50
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||||| || || |||||||||||| ||||||||||||||||||||||||
Sbjct: 93 attcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||| ||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatt 108
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggag 152
Query: 108 ggagtagt 115
||||||||
Sbjct: 153 ggagtagt 160
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||||||| |||||||||| |||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagacttcctagcattgctcacattcat 54
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
||||| ||||||||| ||||||||||||||| || |||||||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttttaacattgcccacattca 110
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 130
Query: 108 ggagtag 114
|||||||
Sbjct: 131 ggagtag 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacat 49
||||| ||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacat 91
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||| |||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 50 atgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||||||||||| ||||| ||||||||| | |||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatataagactttttggcattgtccacatt 51
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 11
Query: 108 ggagtag 114
|||||||
Sbjct: 10 ggagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacat 49
||||| ||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacat 50
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||| |||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 91 atgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 136
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||||||||||| ||||| ||||||||| | |||||| |||||||
Sbjct: 136 tacttcctccgtttcacaatataagactttttggcattgtccacatt 90
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggag 136
Query: 108 ggagta 113
||||||
Sbjct: 137 ggagta 142
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 56 acatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | ||||||| ||||| |||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcat 93
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
| ||||
Sbjct: 153 gaagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacat 113
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatt 55
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || |||| |||||| |||||||||||||||||| ||||||||
Sbjct: 70 attcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgtaaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
||||||||||||||||| || |||||||| ||| ||||||||| ||| |||||||||||
Sbjct: 69 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggagg 10
Query: 109 gagta 113
|||||
Sbjct: 9 gagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||||||||||||| ||| |||| ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | ||| ||||||||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcat 54
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 56 acatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcat 54
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcat 93
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatt 55
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||| ||| || ||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattg 42
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattg 120
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || |||||| | ||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcat 109
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||||||||||||||||| | |||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcat 54
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattca 53
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||| | ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 70 attcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 108 ggagtag 114
| |||||
Sbjct: 10 gaagtag 4
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcat 109
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
||||||||||||||||| || |||||||| ||| ||||||||| ||| |||||||||||
Sbjct: 94 ttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaacggagg 153
Query: 109 gagta 113
|||||
Sbjct: 154 gagta 158
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||||||||||||| ||| |||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | ||| ||||||||||||| |||||||| ||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcat 109
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 97 attaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggag 156
Query: 112 ta 113
||
Sbjct: 157 ta 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||| ||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatt 108
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || ||| || ||| ||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatggaggtaatactataaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| ||||||||||||||| ||| ||| || ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatt 55
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 75 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 134
Query: 108 ggagta 113
||||||
Sbjct: 135 ggagta 140
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcat 91
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacgga 106
||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||| ||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 5 tacttcttccgtttcataatgtaagactttctagcattgcctacattcat 54
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | ||||||||||||| ||||||||| |||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcat 109
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 97.6 bits (49), Expect = 3e-20
Identities = 64/68 (94%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatat--atgtgggcaatgctaaaaagtcttacattgtgaaacgg 105
|||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaacatatatatatgtatgtgagcaatgctaaaaagtcttacattgtgaaacgg 152
Query: 106 agggagta 113
||||||||
Sbjct: 153 agggagta 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || ||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacagag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||| |||| |||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatt 55
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||| ||||||||| ||||||||||||||| ||||||||| |||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacat 115
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 95.6 bits (48), Expect = 1e-19
Identities = 96/112 (85%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||| ||||||||| | | | |||||||||||| |||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacattgcccacattcattatcatctat 64
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
|| || |||| ||||||| ||||||||| | | ||||||||||| ||||||
Sbjct: 65 atgaatatgggtaatgctagaaagtcttataatatgaaacggaggaagtagt 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatcta 62
||||||||||||||| | | | ||||||||||||||||| |||| |||||| | ||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattacccatattcatatagatgat 56
Query: 63 tatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|| |||||||||||| || ||||||||| | | ||||||||||||||||
Sbjct: 55 aatgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 95.6 bits (48), Expect = 1e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaag 132
Query: 112 tagt 115
||||
Sbjct: 133 tagt 136
Score = 93.7 bits (47), Expect = 5e-19
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagactttctagcattgcccacattcat 85
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 58 atctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||| ||||| |||||||| ||||||||||| | ||||||||||||||||
Sbjct: 60 atctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 91 attcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtgaaacggag 150
Query: 108 ggagtagt 115
| ||||||
Sbjct: 151 gaagtagt 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||||| |||| ||||| || ||||||||||||| ||||||||||
Sbjct: 68 attcattaacatctatatat--gtggacaatggtagaaagtcttacattatgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
||||||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 157 ctacttcctccgtttcacaatgtaagactttttagcattgtccacatt 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||| ||||||||| | |||||||||||||||| ||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat 50
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
|||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggag 138
Query: 112 tag 114
|||
Sbjct: 139 tag 141
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcat 91
Score = 75.8 bits (38), Expect = 1e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||||||||||||||||||||||||||||||||
Sbjct: 42 aatgctaaaaagtcttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||| ||||||||| ||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcatt 42
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||||||||||||||||| || ||||||||| ||||| ||||||||
Sbjct: 69 attcattaacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacggag 128
Query: 108 ggagtag 114
| |||||
Sbjct: 129 gtagtag 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||||| ||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 136 gctactacctccgttttacaatataagactttctaacattgcccacat 89
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 56 acatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
|||| |||||| ||||||||||||||| ||||||||| ||| |||||||||||||
Sbjct: 62 acatatatatagatgtgggcaatgctagaaagtcttatattatgaaacggaggga 8
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 9 cctccgttttacaatgtaagactttctagcattgcccacat 49
||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagcattgcccacat 50
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct: 93 attcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacggag 152
Query: 108 ggagtag 114
| |||||
Sbjct: 153 gaagtag 159
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||| ||||||| ||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
||||||||||||||| ||||||||||||||| |||||||||||| |||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatt 108
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgc 43
|||| ||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgc 44
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 93.7 bits (47), Expect = 5e-19
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 23 tgtaagactttctagcattgcccacattcattaacatctatatatatgtgggcaatgcta 82
|||| ||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||
Sbjct: 24 tgtatgactttcaagcatttcccatattcattaatatctatatgaatgtgggcaacgcta 83
Query: 83 aaaagtcttacattgtgaaacggagggagta 113
|||||||||||||||||||| |||| ||||
Sbjct: 84 gaaagtcttacattgtgaaacagaggaagta 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||| |||| |||||||||||||||||||| ||||||||||||||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcat 65
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 93.7 bits (47), Expect = 5e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||| ||| |||||||| | ||||||||||||||| ||||||||||||||
Sbjct: 89 attcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacggag 148
Query: 108 ggagtag 114
|||||||
Sbjct: 149 ggagtag 155
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || |||||||||| |||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatt 55
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||| || |||||||||||| |||||||||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 108 ggagta 113
| ||||
Sbjct: 132 gaagta 137
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 59 tctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||| ||| || ||||||||| ||||| ||||||| |||||||||||||||||
Sbjct: 59 tctatatgtatatgagcaatgctataaagtattacattatgaaacggagggagtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgc 43
|||||||||||||| |||||||||||| || |||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgc 98
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||||||||||||||||||||||| || | |||||||| ||||||||||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggag 152
Query: 108 ggagta 113
| ||||
Sbjct: 153 gaagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||| || ||||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||||||||||||| | |||||||| | ||||||||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacat 113
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || |||||| | ||| |||||||||||| |||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacatggtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| || |||||||||||||||| | |||||| ||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcat 54
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcat 109
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
|||| ||||||||| ||||||| ||||||| ||||||||||||| ||||||||||| ||
Sbjct: 66 attagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | ||||||||||||| ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcat 54
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||| || |||||||||||| |||||||||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 59 tctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||| ||| || ||||||||| ||||| ||||||| |||||||||||||||||
Sbjct: 83 tctatatgtatatgagcaatgctataaagtattacattatgaaacggagggagtag 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgc 43
|||||||||||||| |||||||||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgc 44
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || ||||||||| ||| ||||||||||||||||||||||||
Sbjct: 93 attcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatt 55
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || || |||||||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccac 47
|||| ||||||||| ||||||||||||||||||| |||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccac 115
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 108 ggagta 113
| ||||
Sbjct: 153 gaagta 158
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | ||||||||||||| ||||||| | |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcat 54
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 89.7 bits (45), Expect = 7e-18
Identities = 99/118 (83%), Gaps = 8/118 (6%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgc--------ccacattcatta 55
|||| ||||||||| | ||||||||||||||||||||||| | | ||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcattgcttatatgtctagattcatta 63
Query: 56 acatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| ||||||||||||||| |||| |||||||| ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| ||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcat 54
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 74 gcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 83 gcaatgctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 89.7 bits (45), Expect = 7e-18
Identities = 103/124 (83%), Gaps = 10/124 (8%)
Strand = Plus / Minus
Query: 1 agctacttcctccgttttacaatgtaagactttctagcattgcccacattcat------- 53
||||||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 127 agctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatt 68
Query: 54 ---taacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
|||||||||||| ||||||| ||||||| || | ||||||||||||||||||||||
Sbjct: 67 cattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Query: 111 gtag 114
||||
Sbjct: 7 gtag 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 102/124 (82%), Gaps = 10/124 (8%)
Strand = Plus / Plus
Query: 1 agctacttcctccgttttacaatgtaagactttctagcattgcccacattca-------- 52
||||||| ||||||||| |||||||||| | |||||||||| ||||||||||
Sbjct: 2 agctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatg 61
Query: 53 ttaa--catctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
|||| |||||||| ||||||| ||||||| || | ||||||||||||||||||||||
Sbjct: 62 ttaatgaatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 121
Query: 111 gtag 114
||||
Sbjct: 122 gtag 125
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||| | ||||||||||||||| ||||||||||||| |||||| |||
Sbjct: 70 attcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaactgag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
||||| |||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 4 ctactccctcagtttcataatgtaagactttctagcattgcccacatt 51
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||||||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 85 atgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || || ||||||||| ||||||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaaacggag 152
Query: 108 ggagtagt 115
||||||||
Sbjct: 153 ggagtagt 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||| ||| |||| |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| |||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcat 54
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | ||||||||||||||||||||||| || ||||||
Sbjct: 159 ctactccctccgtttcataatgtaagactttctagcattgctcatattcat 109
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||||||||||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggag 11
Query: 108 ggagtag 114
| |||||
Sbjct: 10 gaagtag 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || |||| ||||||| || | |||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacat 49
||||||||||||||| | |||||||| | ||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacat 50
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 83.8 bits (42), Expect = 5e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 54 taacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||||||| || ||| |||||||| ||||||||||||| ||||||||||
Sbjct: 72 attcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacggag 131
Query: 108 ggagta 113
|||||
Sbjct: 132 agagta 137
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 4 ctactttctccgtttcataatgtaagactttctagcattgcccacatt 51
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 10 ctccgttttacaatgtaagactttctagcattg 42
|||||||| | ||||||||||||||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattg 99
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| ||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcat 54
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || || | ||||||||| ||||||||||||| ||||||||||
Sbjct: 91 attcattaacatctagatgaatataagcaatgctacaaagtcttacattatgaaacggag 150
Query: 108 ggagta 113
||||||
Sbjct: 151 ggagta 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgc 43
|||| ||||||||| | ||||||||||||| |||||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgc 117
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcatccgtttcacaatgtaagactttctagcattgcccacattcat 77
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacgga 106
||||||||||||||| |||||||||||||||||||||||
Sbjct: 81 atgtgggcaatgctagaaagtcttacattgtgaaacgga 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 75 caatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 43 caatgctagaaagtcttacattatgaaatggaggaagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||| ||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 93 attcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcat 109
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| |||||||||| |||| ||||||||||||| |||||| |||
Sbjct: 70 attcattagtatctatataaatgtgggcaacgctagaaagtcttacattatgaaacagag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
||||||||| |||| | |||||||||||||||||| |||||||||||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatt 51
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| |||||||||||||||||| | |||||||| ||||||||||
Sbjct: 93 attcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || |||| || |||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacggag 11
Query: 108 ggagtagt 115
| ||||||
Sbjct: 10 gaagtagt 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||| | || |||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcat 109
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||| |||||||| ||||||||||||| |||||| |||
Sbjct: 67 attcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacagag 126
Query: 108 ggagta 113
||||||
Sbjct: 127 ggagta 132
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||| ||| | |||||||||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 56 acatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| |||||| |||||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| |||| |||| | |||||||||||||||||||||| ||||||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcat 83
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| | |||||||| ||||||||||||||||||||||||||||| |||||| |||
Sbjct: 93 attcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattatgaaaccgag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| |||||||||| |||| ||||||||||||| |||||| |||
Sbjct: 70 attcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatgaaaccgag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||| |||| | |||||||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| |||| |||| | ||||||||||||| |||||||||||||||||||
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcat 109
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 154
Query: 108 ggagta 113
||||||
Sbjct: 155 ggagta 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcat 111
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 94 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacggag 153
Query: 108 ggagta 113
||||||
Sbjct: 154 ggagta 159
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 53 ttaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagt 112
||||||||||||| ||||||| ||||||| ||||||||| | | |||||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagt 6
Query: 113 a 113
|
Sbjct: 5 a 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcat 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | | | ||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcat 54
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 81.8 bits (41), Expect = 2e-15
Identities = 99/120 (82%), Gaps = 10/120 (8%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattc----------at 53
|||||| ||||||||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcatccgttttataatgtaagactttttagcattgcccacattcatttagatttat 64
Query: 54 taacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||| || ||||| ||||| || ||||||||| ||||||||||||||||||||
Sbjct: 65 taacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacggagggagta 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacgga 106
||||||||||||||||||||||||||||| | |||||||
Sbjct: 50 atgtgggcaatgctaaaaagtcttacattataaaacgga 12
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||| ||||||||| ||||| |||||||||||| ||||| ||||||||||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatt 74
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 81.8 bits (41), Expect = 2e-15
Identities = 91/108 (84%), Gaps = 6/108 (5%)
Strand = Plus / Plus
Query: 7 ttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctatata 66
||||||||||| | ||||||| |||||||||||||| |||| |||||||||||
Sbjct: 8 ttcctccgtttcataatgtaaaactttctagcattgtacaca------aacatctatatg 61
Query: 67 tatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
|| || ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 62 aatatgagcaatgctagaaagtcttacattgtaaaacggagggagtag 109
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 109 ctactccctccgttttacaatgtaagactttctagcattgctcatattcat 59
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||| ||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 43 attcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacggag 102
Query: 108 ggagtagt 115
||| ||||
Sbjct: 103 ggaatagt 110
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 9 cctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||| | |||||||||||||||||||||| ||||||||||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcat 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 84 aaagtcttacattgtgaaacggagggagtag 114
||||||||||||| ||||||||||| |||||
Sbjct: 34 aaagtcttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || ||||||| |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 108 ggagtagt 115
| ||||||
Sbjct: 10 gaagtagt 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | || ||||||| |||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||| |||||||||| | ||| |||| ||||||||||
Sbjct: 91 attcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacggag 150
Query: 108 ggagta 113
||||||
Sbjct: 151 ggagta 156
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| |||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 91 attcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacggag 150
Query: 108 ggagtagt 115
| ||||||
Sbjct: 151 gaagtagt 158
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| | |||||||||||||||||||||| ||||||||||
Sbjct: 157 ctacttcctccgtttcataatgtaagactttctagcattgtccacattcat 107
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || | |||||||||| ||||||||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||||||||||||||||||| | ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcat 54
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagtagt 115
||||||||
Sbjct: 153 ggagtagt 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||||||||
Sbjct: 42 aatgctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaacggag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| |||| ||||||| |||||||||| | |||| ||||||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacggag 152
Query: 108 ggagtag 114
| |||||
Sbjct: 153 gaagtag 159
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||| | || ||||||| |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagcattacccacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| ||||| |||| | || ||||||| |||||||||||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcat 109
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 77.8 bits (39), Expect = 3e-14
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcattg-ccacattcatt 90
Score = 67.9 bits (34), Expect = 3e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||| ||||||||| || |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 75 attcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacggag 133
Query: 108 ggagta 113
| ||||
Sbjct: 134 gaagta 139
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 56 acatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||| ||||||| |||||||| |||| |||| ||||||||||||||| ||||
Sbjct: 62 acatctatacgtatgtggccaatgctagaaaggcttagattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
|||||||||||||| ||||| |||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcattggccacat 50
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatt 55
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||| | ||||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagtag 114
|||||||
Sbjct: 10 ggagtag 4
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 84 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 143
Query: 108 ggagtag 114
|||||||
Sbjct: 144 ggagtag 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagtagt 115
| ||||||
Sbjct: 10 gaagtagt 3
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 100
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 77.8 bits (39), Expect = 3e-14
Identities = 97/117 (82%), Gaps = 7/117 (5%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattca-------ttaa 56
|||||||||||||| |||||||||| | || ||||||| |||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatttcattaa 64
Query: 57 catctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| |||| ||||||| ||||||| || | |||| ||||||||||||||||||||
Sbjct: 65 catcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagggagta 121
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| |||||||||| | |||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||
Sbjct: 69 attcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 128
Query: 108 ggagtag 114
| |||||
Sbjct: 129 gaagtag 135
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 agctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||||| |||||||||| | || ||||||| |||||||||||
Sbjct: 137 agctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcat 85
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||| |||| | |||||||||||||||||| ||||||
Sbjct: 42 aatgccaaaatgacttacattgtgaaacggatggagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||||| |||||||||| |||||||||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcat 83
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||| ||||||| || |||||||||||||||||||||| |||||
Sbjct: 87 atgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtag 133
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| ||||| || |||| ||||||| || | ||||||||||| |||||||
Sbjct: 70 attcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 151
Query: 108 ggagta 113
||||||
Sbjct: 152 ggagta 157
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 108
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||||| ||||||| ||||| |||| | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| ||||||| ||||||| || | |||||||||||| ||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgatacggag 152
Query: 108 ggagtag 114
|||||||
Sbjct: 153 ggagtag 159
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||| ||||||| | |||||||||| | |||||||||| |||||||||||
Sbjct: 160 gctactccctccgtatcacaatgtaagtcattctagcatttcccacattcat 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||||||||||| |||||||||| | || | ||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatt 51
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||| | |||||||| ||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||||||||||||||||| | ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | ||||||||||||||||| ||| ||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcat 109
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||||| | ||||| ||||||| || | |||| ||||||||||||||
Sbjct: 91 attcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacggag 150
Query: 108 ggagta 113
| ||||
Sbjct: 151 gaagta 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccac 47
|||||||||||||| ||||| |||| | |||||||||| |||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccac 113
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||| ||||||||||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 93 attcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||| | |||| ||||| | |||||| ||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 109
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcat 96
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || || | ||||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 46 acattcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacgg 105
||||||||||||||| |||| ||||||| ||| || || | |||||||||||||||||
Sbjct: 91 acattcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacgg 150
Query: 106 agggagtag 114
||| |||||
Sbjct: 151 aggaagtag 159
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | ||||| ||| |||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcat 109
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 61 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 120
Query: 108 ggagta 113
| ||||
Sbjct: 121 gaagta 126
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcat 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||||||||| ||| ||||| | | ||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaaatcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
|||||||||||||| |||||| |||||||| ||||||||||||| ||||| ||||||||
Sbjct: 66 attaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatggagggag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 73 ggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaacggagggagta 124
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||| ||| | |||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcat 54
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||||| ||||||| |||||||||| | ||||| |||||||||||||
Sbjct: 93 attcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacggag 152
Query: 108 ggagta 113
| ||||
Sbjct: 153 gaagta 158
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||| |||||| ||||| ||||||| ||||| |||| | ||||| |||||||||||||
Sbjct: 70 attcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||||||||||| |||| ||||| | || ||||||| ||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatt 112
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
||||||||||||||||| |||||||||||||| ||||||||| | | |||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagg 10
Query: 109 gagta 113
|||||
Sbjct: 9 gagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 160 gctacttcctccgtttcatattataagactttctagcattgcccacattcat 109
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 152
Query: 108 ggagtag 114
| |||||
Sbjct: 153 gaagtag 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | | | |||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcat 54
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 73.8 bits (37), Expect = 4e-13
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||| ||||||||| ||||||||| | |||||||||| | ||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcattagcatcaat 64
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacg 104
|| ||||||| |||||||||| | ||| ||||||| ||||
Sbjct: 65 atgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 90 ttacattgtgaaacggagggagta 113
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 73.8 bits (37), Expect = 4e-13
Identities = 96/113 (84%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 3 ctacttcctccgtttt-acaatgtaagactttctagcattgcccacattcat-taacatc 60
|||||||||||||||| ||||| |||| | |||||||||| ||||||||||| | |||
Sbjct: 117 ctacttcctccgttttcacaatataagtcattctagcatttcccacattcatattgaatc 58
Query: 61 tatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| ||||||| ||||||| || | |||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||| | ||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 70 attcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattcat 54
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||||| ||||||| || | |||||||| ||||||||||
Sbjct: 73 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 132
Query: 108 ggagta 113
||||||
Sbjct: 133 ggagta 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||| | |||||||||| |||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcat 89
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 71.9 bits (36), Expect = 2e-12
Identities = 94/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatct 61
|||||||||||||||| | ||||||||| ||| |||||| | | | ||| || | |||
Sbjct: 115 gctacttcctccgtttcataatgtaagattttttagcatcgtctatatttatatag-tct 57
Query: 62 atatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||| || ||| | |||||||||||||||| ||||||||||||||||||||
Sbjct: 56 atataaatatggacgatgctaaaaagtcttatattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 91/111 (81%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||| ||||||||| ||||| ||||||||| |||||| | ||| ||| || | | ||||
Sbjct: 5 tactccctccgtttcacaatataagactttttagcatcgtccatatttatataga-ctat 63
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||| || | | | |||||||||| ||||||||| ||||||||||| |||||
Sbjct: 64 ataaatatagacgatgctaaaaaatcttacattatgaaacggaggaagtag 114
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||| | ||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 63 attcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 122
Query: 108 ggagtagt 115
||||||||
Sbjct: 123 ggagtagt 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 129 ctactccctccgtttcatattataagactttctagcattgcccacattcat 79
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || | |||||||||| || | |||||||| ||||||||||
Sbjct: 93 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 152
Query: 108 ggagtagt 115
||||||||
Sbjct: 153 ggagtagt 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||| ||| ||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 11
Query: 108 ggagtag 114
| |||||
Sbjct: 10 gaagtag 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| | |||||||| | |||||||| ||| |||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | |||||||| | ||||||||||||| | ||||||
Sbjct: 159 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcat 109
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 50 tcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggg 109
||||||||||| |||| |||||| |||||||||| | |||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 110 agta 113
||||
Sbjct: 8 agta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 ttacattgtgaaacggagggagta 113
||||||||||||||||||||||||
Sbjct: 105 ttacattgtgaaacggagggagta 128
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagtagt 115
| ||||||
Sbjct: 153 gaagtagt 160
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 109
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || ||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 97 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 156
Query: 108 ggagtagt 115
||||||||
Sbjct: 157 ggagtagt 164
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 163 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 113
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 93/112 (83%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||||||||||||| | | | ||||||||||||||||| ||||||| || | |||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatataattctat 55
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
|| |||||| ||||||| ||||||||| | | ||||||||||||||||||
Sbjct: 54 atgaatgtggataatgctataaagtcttataatatgaaacggagggagtagt 3
Score = 54.0 bits (27), Expect = 4e-07
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatcta 62
||||| ||||||||| | | | ||||||||| ||||||| |||||||||| | | ||
Sbjct: 4 ctactccctccgtttcatattataagactttatagcattatccacattcatatagaatta 63
Query: 63 tatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| |||||| ||||||| ||||||||| | | ||||||||||| ||||
Sbjct: 64 tataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || | |||||||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacggag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||| ||| ||||| || | |||||||| ||||||||||
Sbjct: 93 attcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacggag 152
Query: 108 ggagtag 114
| |||||
Sbjct: 153 gaagtag 159
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| | |||||||| | |||||||| ||| |||||||||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcat 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | |||||||| | ||||||||||||| | ||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcat 54
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 69.9 bits (35), Expect = 7e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 59 tctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||| || ||| | |||||||||||||||||||| ||||||||||||||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||| | |||||||||| | |||||||||||||||||||
Sbjct: 93 attcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacggag 152
Query: 108 ggagtag 114
|||||||
Sbjct: 153 ggagtag 159
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| |||| ||||| | |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggag 11
Query: 108 ggagtag 114
|||||||
Sbjct: 10 ggagtag 4
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 95
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||| |||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcat 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 55 aacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
|||||| |||| ||||||| ||||||| || | |||||||||||||||||||| |||||
Sbjct: 86 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 145
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| |||| ||||| | |||||||| ||||||||||
Sbjct: 81 attcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacggag 140
Query: 108 ggagtag 114
|||||||
Sbjct: 141 ggagtag 147
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| ||||||| ||||||| ||||||||| | | ||||||||||
Sbjct: 67 attcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaacggag 126
Query: 108 ggagtag 114
|||||||
Sbjct: 127 ggagtag 133
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | | | ||||||||||||||||| |||||||||||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcat 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | | ||||||||||||| ||| |||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcat 54
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 46
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||| ||||||| || | |||||||||||||||||||| |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | ||||||||||||||| |||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagtag 114
|||||||
Sbjct: 10 ggagtag 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| |||||| |||| || || | |||||||||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcatt 54
|||||||||||||| | |||| |||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatt 55
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||| || | ||||||| || ||||||||||||||||||||||||
Sbjct: 93 attcattaacatctatgggtacataggcaatgttagaaagtcttacattgtgaaacggag 152
Query: 108 ggagtag 114
|||||||
Sbjct: 153 ggagtag 159
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||||| || ||||||| ||||||| |||||||| |||| ||||||||||
Sbjct: 70 attcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcc 44
|||||| ||||||||| |||||||||||||||||| |||||||
Sbjct: 160 gctactccctccgtttcacaatgtaagactttctaacattgcc 118
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||| | | |||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 108 ggagta 113
| ||||
Sbjct: 127 gaagta 132
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||||||||||| ||||||||| | | ||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacggagggagtagt 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
||||| ||||||||| | | | ||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattca 53
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||| |||| | | | |||||||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcat 83
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| ||||||| || | |||||||||||||||||||
Sbjct: 74 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 133
Query: 108 ggagta 113
||||||
Sbjct: 134 ggagta 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| | |||||||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| || |||| ||||||| ||||||||| ||| ||||||||||
Sbjct: 75 attcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacggag 134
Query: 108 ggagta 113
||||||
Sbjct: 135 ggagta 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| || || ||||||||| |||| |||| ||| |||||| |||
Sbjct: 70 attcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaacagag 11
Query: 108 ggagtagt 115
| ||||||
Sbjct: 10 gaagtagt 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | ||| ||||||||||||||||| |||| ||||||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcat 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||| |||| | ||| |||| |||||||||||||| || ||||||
Sbjct: 4 ctacttcctctgtttcataatataagtctttctagcattgctcatattcat 54
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| |||||||||||| || ||||||||| | | ||||||||||
Sbjct: 73 attcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacggag 132
Query: 108 ggagta 113
||||||
Sbjct: 133 ggagta 138
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||||| | | ||||||| ||||| |||||||||||||||
Sbjct: 5 tacttcctccgttttatattataagactatctagtattgcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | | | |||||||||||| ||||||||||||||||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcat 89
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||||||| || | |||| ||||||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggag 134
Query: 108 ggagta 113
||||||
Sbjct: 135 ggagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||| | ||||||| || | ||||||||||||||||||
Sbjct: 76 attcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacggag 135
Query: 108 ggagta 113
||||||
Sbjct: 136 ggagta 141
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| |||| ||||||| ||||||| || | ||||| |||||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 112 ta 113
||
Sbjct: 136 ta 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||| ||||| | |||||||||| |||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcat 88
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| |||||| ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||||| |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | || ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaa-gtcttacattgtgaaacggaggg 109
||||| |||| |||| ||||||| ||||||||| | | |||||||||||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 110 agtagt 115
||||||
Sbjct: 140 agtagt 145
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| ||||||| ||| ||| || |||||||||||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||||| |||||| ||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagtag 114
||||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcat 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||| ||||||||||||||||||||
Sbjct: 87 atgtgggaaatgctagaatgacttatattgtgaaacggagggagta 132
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||| ||||||||||||| ||||||||||||||| ||||||||| | | ||||||||||
Sbjct: 70 attcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcat 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||||||||||||||
Sbjct: 113 taagactttctagcattgcccacattcat 85
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||||||||| ||||||||| | | ||||| ||||| ||||
Sbjct: 89 atgtgggcaatgctagaaagtcttataatctgaaatggaggtagta 134
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
|||||||||||| |||| ||||||| ||||||| || | ||||||||||||||| ||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaccgagg 141
Query: 109 gagtag 114
||||||
Sbjct: 142 gagtag 147
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 agctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||||| | |||||||| | |||||||||| ||||||||||
Sbjct: 2 agctacttcctccgtttcataatgtaagtcattctagcattttccacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 108 ggagtag 114
| |||||
Sbjct: 10 gaagtag 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| |||| |||| |||||||||| | |||||||||| |||||||||||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcat 97
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||||| ||| |||||| | |||| ||||||||||||||
Sbjct: 93 attcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaacggag 152
Query: 108 ggagtagt 115
||||||||
Sbjct: 153 ggagtagt 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||| || |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| ||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 55 aacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
|||||| |||| ||||||| ||||||| || | |||||||| |||||||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagtag 136
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | |||||||| | |||||||||| |||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcat 86
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||| | |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 83 cttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| ||||||||| | | |||||| |||
Sbjct: 67 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaactgag 126
Query: 108 ggagta 113
| ||||
Sbjct: 127 gaagta 132
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||||||||||| ||||||||| | | ||||||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttataatatgaaacggagggagtagt 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
||||| ||||||||| | | | ||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattca 53
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||| |||| | | | |||||||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcat 83
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| || | ||||||| |||||| |||
Sbjct: 67 attcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaacagag 126
Query: 108 ggagta 113
||||||
Sbjct: 127 ggagta 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgccca 46
||||||||||||||| | |||||||| | |||||||||| ||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattaccca 47
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| |||||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 5 tactttctccgtttcataatgtaagactttctagcattgcccatattcat 54
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 78 tgctaaaaagtcttacattgtgaaacggagggagta 113
||||| ||||||||||||||||||||||||||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggagggagta 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 57 catctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| || |||||||||||| ||||||||||||| ||||||||||
Sbjct: 61 catctatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagca 39
|||| ||||||||| |||||||||||||||||||||
Sbjct: 98 tactccctccgtttcacaatgtaagactttctagca 63
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gtagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcatt 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 103 aatgctagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| ||||| |||||| |||||||||| | |||| ||||||||||||||
Sbjct: 87 attcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacggag 146
Query: 108 ggagta 113
||||||
Sbjct: 147 ggagta 152
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| || || ||||| | |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||||||||||| |||||||||| | || ||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatt 51
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||| |||||| |||||| ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||| |||||| ||||||| |||| || || | |||||||| || ||||||
Sbjct: 70 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacggaa 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||||| |||||||||| | |||||||||||||||||||
Sbjct: 78 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggag 137
Query: 108 ggagta 113
| ||||
Sbjct: 138 gaagta 143
Score = 60.0 bits (30), Expect = 7e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaa-gtcttacattgtgaaacggaggg 109
||||| |||| |||| ||||||| ||||||||| | | |||||||||||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 110 agtagt 115
||||||
Sbjct: 8 agtagt 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | || ||||||| |||||||||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcat 94
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 81
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 85 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| | |||||||||| |||| ||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| ||||||||| |||||| |||||||| || | | |||||||||||||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||| | | ||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcat 54
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||| ||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 87 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||| ||| ||||| ||||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcat 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||| ||||||||||||||| ||||
Sbjct: 91 atgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
|||||||||||| ||||| ||||||| ||| ||| || | ||||||||||||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 109 gagtag 114
|||||
Sbjct: 147 aagtag 152
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
||||||||||||||| |||||||||| | |||||| ||| ||||||||
Sbjct: 152 ctacttcctccgtttcacaatgtaagtcattctagtatttcccacatt 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
|||||||||||| |||| ||||||| ||| || || | |||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 109 gagta 113
|||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| |||||||||| | |||| ||||||||||||||
Sbjct: 84 attcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacggag 143
Query: 108 ggagta 113
||||||
Sbjct: 144 ggagta 149
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | ||||||||||||||| |||
Sbjct: 65 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 124
Query: 108 ggagta 113
||||||
Sbjct: 125 ggagta 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| |||| |||| |||||||||| | |||||||||| |||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcat 81
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| |||| || ||||||| || | |||| ||||||||||||||
Sbjct: 87 attcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaacggag 146
Query: 108 ggagtagt 115
||||||||
Sbjct: 147 ggagtagt 154
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| ||||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | ||||||||||||||||| |
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgggg 142
Query: 108 ggagta 113
||||||
Sbjct: 143 ggagta 148
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||||||||||| |||||||||| | |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 12 ccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcat 99
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||| ||| ||||||||| | | |||||| |||
Sbjct: 70 attcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 25 taagactttctagcattgcccacattcat 53
||||||||||||| |||||||||||||||
Sbjct: 26 taagactttctagaattgcccacattcat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaat 78
|||||||||||||||||| |||||||||||
Sbjct: 95 attcattaacatctatatgaatgtgggcaat 125
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | ||||||||||| |||||||
Sbjct: 91 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggag 150
Query: 108 ggagta 113
||||||
Sbjct: 151 ggagta 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| |||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcat 107
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 46 acattcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacgg 105
||||||||||||||| |||| |||| | ||||||| || | ||||||||||| |||||
Sbjct: 72 acattcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtggaacgg 13
Query: 106 agggagta 113
||| ||||
Sbjct: 12 aggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
||||||||||||| |||||||||| | ||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| ||||||| || | |||||||| ||||||||||
Sbjct: 75 attcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacggag 134
Query: 108 ggagta 113
| ||||
Sbjct: 135 gaagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| | |||||||||| |||| ||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 91
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||| ||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||| ||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 90 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||| | ||| |||||| | |||||||||||||||||||
Sbjct: 82 attcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacggag 141
Query: 108 ggagta 113
||||||
Sbjct: 142 ggagta 147
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| ||||| ||||| ||| |||||| | ||||||||||||||| |||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 81
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 53 ttaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagt 112
|||||||| |||| ||||||| ||||||| || | ||||||||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 113 a 113
|
Sbjct: 5 a 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 50 tcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggg 109
||||||||||| |||| ||||||| ||||||| || | ||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 110 agta 113
||||
Sbjct: 127 agta 130
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa
Japonica Group
Length = 144
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| ||||||| || | |||| ||||||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 134
Query: 108 ggagta 113
||||||
Sbjct: 135 ggagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcat 91
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| |||| || || | |||||||||||||||||||
Sbjct: 71 attcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 130
Query: 108 ggagta 113
||||||
Sbjct: 131 ggagta 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | ||||| |||| |||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcat 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 71 tgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 53 ttaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagt 112
|||||||| ||||| || || | |||||||||| | ||||||||||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 113 a 113
|
Sbjct: 5 a 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 53 ttaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagt 112
|||||||| ||||| || || | |||||||||| | |||| ||||||||||||||| |||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 113 a 113
|
Sbjct: 122 a 122
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 50 tcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggg 109
||||||||||| |||| |||||| ||||||| || | |||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 110 agtag 114
|||||
Sbjct: 8 agtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcatt 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 115 aatgctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 21 aatgtaagactttctagcattgcccacattcat 53
|||||||||||||||||||||||||||||||||
Sbjct: 1 aatgtaagactttctagcattgcccacattcat 33
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 21 aatgtaagactttctagcattgcccacattcat 53
|||||||||||||||| ||||||||||||||||
Sbjct: 120 aatgtaagactttctaacattgcccacattcat 88
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacatt 96
||||||||||||||| |||||||||||||
Sbjct: 29 atgtgggcaatgctagaaagtcttacatt 1
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacatt 96
||||||| ||||||||| |||||||||||| || |||||||||||||
Sbjct: 72 attcatttgcatctatatgaatgtgggcaatgttagaaagtcttacatt 120
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 65.9 bits (33), Expect = 1e-10
Identities = 89/105 (84%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 9 cctccgttttacaatgtaagactttctagcattgcccacattcattaacatctatatata 68
||||||||| |||||||||| | |||||||||| | ||||||||||||||| |||| |
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcattttc-acattcattaacatcaatatgga 49
Query: 69 tgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 48 tgtgaa-aatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggaggg 109
||||||| || | |||||||||||||||||||||
Sbjct: 75 aatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtctta 92
|||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||||||||||||||
Sbjct: 113 taagactttctagcattgcccacattcat 85
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtctta 92
|||||||||||| ||||| |||||| |||||||| |||||||||
Sbjct: 46 attcattaacatatatatgaatgtggacaatgctagaaagtctta 2
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||| ||||||||||
Sbjct: 2 taagactttctagcattgtccacattcat 30
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 65.9 bits (33), Expect = 1e-10
Identities = 94/113 (83%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcat-tgcccacattcattaacatc 60
|||||| ||||||||| |||||||||| | ||||||||| | | | ||||||||| |||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatatatctagattcattaatatc 62
Query: 61 tatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| ||||||| ||||||| || | |||||||| ||||||||||| ||||
Sbjct: 63 aatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| | |||||||||| |||||||||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcat 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagtag 114
||||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtctta 92
|||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||||||||||||||
Sbjct: 113 taagactttctagcattgcccacattcat 85
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtctta 92
|||||||||||| ||||| || |||||||||||| |||||||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaaagtctta 2
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||||||| ||||||
Sbjct: 2 taagactttctagcattgcccatattcat 30
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtctta 92
|||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtctta 92
|||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaaagtctta 2
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||||||||||||||
Sbjct: 2 taagactttctagcattgcccacattcat 30
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||||||||||||||
Sbjct: 113 taagactttctagcattgcccacattcat 85
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 61 tatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||| ||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 57 tatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 63 tatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| ||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 99 tataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 58.0 bits (29), Expect = 3e-08
Identities = 83/102 (81%), Gaps = 8/102 (7%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||| ||||||||| |||||||||| | |||||||||| |||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttat--------at 56
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacgg 105
||| ||||||| ||||||| || | |||||||||||||||||
Sbjct: 57 ataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||||||||||||| || | |||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacggag 11
Query: 108 g 108
|
Sbjct: 10 g 10
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 7 ttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||| | ||| |||| | ||||||||||||||||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||||||| ||| || | |||| |||||||||||||||||||||
Sbjct: 111 atgtgggcaatcctagaatgacttatattgtgaaacggagggagtag 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacattc 51
|||||| ||||||||| ||||| |||| | |||||| |||||||||||||
Sbjct: 158 gctactccctccgtttcacaatataagtcattctaggattgcccacattc 109
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||| || ||||||| || | |||||||| ||||||||||
Sbjct: 58 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggag 117
Query: 108 ggagtagt 115
||||||||
Sbjct: 118 ggagtagt 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 4e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| ||||| ||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 78 attaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacggagggag 137
Query: 112 tagt 115
||||
Sbjct: 138 tagt 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| | |||||||||||||| ||||||||||
Sbjct: 42 aatgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||| ||||||||||||| || ||| ||||||| ||||||||||||| ||||||||||
Sbjct: 70 attcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaacggag 11
Query: 108 ggagtagt 115
||| ||||
Sbjct: 10 ggaatagt 3
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 cctccgttttacaatgtaagactttctagcatt 41
||||||||| | |||||||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagactttctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 aaagtcttacattgtgaaacggagggagtag 114
||||||||||||| ||||||||||| |||||
Sbjct: 79 aaagtcttacattatgaaacggaggaagtag 109
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgc 43
|||||||||||||||| ||| |||||||||||||||||||
Sbjct: 5 tacttcctccgttttataatataagactttctagcattgc 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||| | | ||| |||||||||||||||||| ||| ||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcat 56
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| || |||| |||| || || | |||||||||||||||||||
Sbjct: 92 attcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaacggag 151
Query: 108 ggagtagt 115
||||||||
Sbjct: 152 ggagtagt 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||||||| | |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcat 54
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 4e-10
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat-taacatct 61
||||||||||||||| ||||| |||| | |||||||||| ||||||||||| | |||
Sbjct: 115 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgaatca 56
Query: 62 atatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| |||| || ||||||| || | |||| ||||||||||||||||||||
Sbjct: 55 atatgaatgt-ggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||| ||||||| || | |||| ||||||||||||||| ||||||
Sbjct: 69 atgtgggaaatgctagaatgacttatattgtgaaacggaggaagtagt 116
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| |||| |||||| ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagtagt 115
||||||||
Sbjct: 153 ggagtagt 160
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | || ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| |||||||||| | |||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| | |||||||| | |||||||||| |||||||||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcat 80
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
|||||||||| |||| ||||||| ||||||| || | |||||||| ||||||||||| |
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 111 gtag 114
||||
Sbjct: 127 gtag 130
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| |||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 11
Query: 108 ggagtag 114
|||||||
Sbjct: 10 ggagtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| ||||| ||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 97 attaacatcaatataaatgtga--aatgctagaatgacttacattgtgaaacggagggag 154
Query: 112 tag 114
|||
Sbjct: 155 tag 157
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | |||||||||| || ||||||||
Sbjct: 127 ctacttcctccgtttcacaatgtaagtcattctagcatttccaacattcat 77
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 70 gtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| |||| || ||||||| || | |||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 108 ggagtagt 115
| ||||||
Sbjct: 121 gaagtagt 128
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 61 tatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
|||||| ||||||| ||||||| || | |||||||| ||||||||||||||||||
Sbjct: 76 tatatagatgtgggaaatgctagaatgacttacattatgaaacggagggagtagt 130
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 19 acaatgtaagactttctagcattgcccacattcat 53
|||||||||||||||| ||||||||||||||||||
Sbjct: 87 acaatgtaagactttccagcattgcccacattcat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaa 101
|||||||||||||| ||||||||||||||||||
Sbjct: 57 atgtgggcaatgctggaaagtcttacattgtgaa 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 26 aagactttctagcattgcccacattca 52
||||||||| |||||||||||||||||
Sbjct: 141 aagactttccagcattgcccacattca 115
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
|||||||||| |||| |||||| ||||||| || | ||||||||||||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggga 8
Query: 111 gta 113
|||
Sbjct: 7 gta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcat 97
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
|||||||||| |||| ||||||| ||||||| || | ||||||||||| |||||||| |
Sbjct: 84 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacggaggaa 143
Query: 111 gta 113
|||
Sbjct: 144 gta 146
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| |||| || || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
Query: 108 ggagtag 114
||||||
Sbjct: 10 agagtag 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 10 ctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||| |||||||||| | ||||| |||| |||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | ||||||||||||||||||| |||||
Sbjct: 106 aatgctagaatgacttacattgtgaaacggagagagta 143
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
|||||||||||||||| ||||| |||| | |||||||||| ||||||||||
Sbjct: 137 gctacttcctccgtttcacaatataagtcattctagcatttcccacattca 87
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||| || | |||| ||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttatattgtgaaacggagggagtagt 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||| ||||||| || | |||| ||||||||||||||| |||||
Sbjct: 90 atgtgggaaatgctagaatgacttatattgtgaaacggaggaagtag 136
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 19 acaatgtaagactttctagcattgcccacattcat 53
|||||||||||||||| ||||||||||||||||||
Sbjct: 53 acaatgtaagactttccagcattgcccacattcat 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaa 101
|||||||||||||| ||||||||||||||||||
Sbjct: 83 atgtgggcaatgctggaaagtcttacattgtgaa 50
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 75 caatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||| |||||||||||||||||||||||| |||||
Sbjct: 56 caatgctagaaagtcttacattgtgaaacggagagagta 94
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 10 ctccgttttacaatgtaagactttctagcattg 42
|||||||| ||||||||||||||||||||||||
Sbjct: 88 ctccgtttcacaatgtaagactttctagcattg 56
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattc 51
|||||||| |||| | |||||||||||||||||||||| ||| ||||
Sbjct: 5 tacttcctatgtttcataatgtaagactttctagcattgtccatattc 52
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| |||||| || | |||||||||||||||||||
Sbjct: 91 attcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacggag 150
Query: 108 ggagtag 114
|||||||
Sbjct: 151 ggagtag 157
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| ||||| ||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 64 attaacatcaatataaatgtga--aatgctagaatgacttacattgtgaaacggagggag 7
Query: 112 tag 114
|||
Sbjct: 6 tag 4
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| ||||| |||| ||||||| ||||||| || | |||||||| ||||||||||
Sbjct: 87 attcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggag 146
Query: 108 ggagtag 114
|||||||
Sbjct: 147 ggagtag 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | ||||| |||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | |||||||| | |||||||||| |||||||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcat 103
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| ||||| |||| ||||||| |||| || || | |||||||||||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||
Sbjct: 93 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataacttgaaacggag 152
Query: 108 ggagtag 114
| |||||
Sbjct: 153 gtagtag 159
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 25 taagactttctagcattgcccacattcat 53
|||||||||||||||||||||||||||||
Sbjct: 137 taagactttctagcattgcccacattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | ||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
|||||||| ||||| ||||||||||||| | ||||||||| | ||||||||||| ||
Sbjct: 66 attaacatatatatgaatgtgggcaatgccagaaagtcttataacttgaaacggaggaag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 89/110 (80%), Gaps = 10/110 (9%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||||||||||||| | | | ||||||||||||||||||||||| || |||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgcccacgtt----------tat 55
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|| ||||||||||||||| ||||||||| | | ||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | | | |||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcat 54
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
|||||||||||| |||| ||||||| ||||||| || | ||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 109 gagtagt 115
||||||
Sbjct: 9 aagtagt 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||| ||| | |||||||||| |||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgcaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| |||||||||| | |||||||||| | |||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagtagt 115
|||||||||||||||||||||||||||
Sbjct: 87 cttacattgtgaaacggagggagtagt 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||| || | |||||||||||||||||||| ||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtagt 3
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
||||||||||||||| |||| || ||||| ||||||||||||| |||||||||||||
Sbjct: 67 cattaacatctatatgaatgtaaacagtgctagaaagtcttacattatgaaacggaggga 8
Query: 111 gta 113
|||
Sbjct: 7 gta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
||||||||||| || | ||| ||||||||||||||||||||||| ||||
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttca 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| |||||||| | | ||||||||||||| ||||||||| ||| |||| |||||
Sbjct: 93 attcattgacatctatgtgaacgtgggcaatgctagaaagtcttatattatgaagcggag 152
Query: 108 ggagta 113
| ||||
Sbjct: 153 gaagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagca 39
|||| ||||||||| | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagca 40
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 ttacattgtgaaacggagggagta 113
||||||||||||||||||||||||
Sbjct: 72 ttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || ||| ||||||| || | |||||||||||||||||||
Sbjct: 80 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 139
Query: 108 ggagta 113
||||||
Sbjct: 140 ggagta 145
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
||||||||| ||||| ||||| | ||||||| || | |||||||| |||||||||||
Sbjct: 66 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 10
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 5 acttcctccgttttacaatgtaagactttctagcattgcccacatt 50
||||||||||||| | |||||||| | |||||||||| | ||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatt 51
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| ||||| || || | |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| | |||| ||||||||||||||||||||
Sbjct: 102 aatgctaaaatgacttatattgtgaaacggagggagta 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | || |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatt 42
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||| ||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcat 88
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 71 tgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 95 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| ||||| |||| | |||||||||| | ||||||||||||||||||
Sbjct: 81 attcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaacggag 140
Query: 108 ggagta 113
||||||
Sbjct: 141 ggagta 146
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| ||||||| ||||||| || | |||| ||||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcat 109
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa
Indica Group
Length = 116
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||||| |||||||||||||||| || | ||||||||||
Sbjct: 5 tacttcctccgttttataatgtaagactttctaacactttccacattcat 54
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 85 aagtcttacattgtgaaacggagggagta 113
|||||||||||| ||||||||||||||||
Sbjct: 84 aagtcttacattatgaaacggagggagta 112
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
||||||||||||||| | |||||||| |||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagttattctagcattgcccacattca 53
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
|||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataacttacattatgaaacggagggag 135
Query: 112 ta 113
||
Sbjct: 136 ta 137
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||||||||||| || |||||||| ||||||||||| ||||||
Sbjct: 50 atgtgggcaatgctagaataacttacattatgaaacggaggaagtagt 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| | |||||||| ||||||||||| ||||||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcat 88
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 49 ttcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagg 108
|||||||||||| |||| ||||| | ||||||| || | ||||||||||||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 109 gagtag 114
||||||
Sbjct: 145 gagtag 150
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 agctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||||| | |||||||| | |||||||||| ||||||||||
Sbjct: 2 agctacttcctccgtttcataatgtaagtcattctagcattttccacattcat 54
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||||||| || | |||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggag 11
Query: 108 ggagtag 114
| |||||
Sbjct: 10 gaagtag 4
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| ||||| ||||||||| || | |||||||| ||||| ||||
Sbjct: 67 attcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatggag 126
Query: 108 ggagta 113
| ||||
Sbjct: 127 gaagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||| ||| | |||||||| | |||||||||||| |||||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcat 83
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| ||||| || ||| ||||||| || | |||||||||||||||||||
Sbjct: 81 attcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacggag 140
Query: 108 ggagta 113
||||||
Sbjct: 141 ggagta 146
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacgga 106
||||||||||||| |||| ||||| | ||||||| || | ||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| ||||||| |||| || || | |||||||||||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| | |||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | ||||| |||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 121 aatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || ||| |||||||||| | |||||||||||||||||||
Sbjct: 65 attcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggag 124
Query: 108 ggagta 113
| ||||
Sbjct: 125 gaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 62 atatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||| ||||||| ||| |||||| | |||||||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | || |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatt 93
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | | |||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| |||| ||||| |||||||||||| || ||||||||| | | ||||||||||
Sbjct: 70 attcattgacatatatatgaatgtgggcaatgttagaaagtcttataatatgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| |||||||||| | ||| |||| ||| ||||||||| | | ||||||||||
Sbjct: 93 attcattgacatctatatgaagatggacaattctagaaagtcttataatatgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||
Sbjct: 70 attcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagtagt 115
|||||||||||||||||||||||||||
Sbjct: 102 cttacattgtgaaacggagggagtagt 128
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 70 gtgggcaatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||| ||||||| || | |||||||||||||||||||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagtagt 3
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | || ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| |||||||||| | |||||||||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| ||||| || || | ||||||| || | |||||||||||||||||||||||
Sbjct: 84 attaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaacggagggag 143
Query: 112 ta 113
||
Sbjct: 144 ta 145
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| | |||||||||||||||||||||||||
Sbjct: 42 aatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcatt 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 88/110 (80%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctat 63
|||| ||||||||| |||||||||| | || ||||||| ||| |||||||| | |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcattca------t 58
Query: 64 atatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||| ||||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 59 ataattgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||| ||| ||||| |||||| ||||||| || | |||||||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcat 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||| ||||||||||||||| ||||
Sbjct: 91 atgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| ||||| || ||| ||||||| || | |||||||||||||||||||
Sbjct: 81 attcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacggag 140
Query: 108 ggagta 113
||||||
Sbjct: 141 ggagta 146
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacgga 106
||||||||||||| |||| ||||| | ||||||| || | ||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcat 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||| ||||||||||||||| ||||
Sbjct: 74 atgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
|||||||||||| | |||||| |||||||| ||||||||| | | ||||||||||||||
Sbjct: 66 attaacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaacggagggag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | | |||||||||||||||||| ||||||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcat 88
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 55 aacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||||| |||||| |||||||| ||||||||| | | ||||||||||| ||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
|||| ||||||||| | | | |||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattca 53
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| ||||||| |||| || || | |||||||||||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | ||||| |||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcat 54
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 134 cttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || |||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcat 54
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| |||| ||||| | ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcat 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 50 tcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggg 109
||||||||||| |||| |||||| || |||| || | |||||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 110 agtag 114
|||||
Sbjct: 149 agtag 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||| | |||| ||||| | ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||||||||
Sbjct: 93 aatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||||||| ||| ||||||| || | |||||||||||||||||||
Sbjct: 65 attcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacggag 124
Query: 108 ggagta 113
| ||||
Sbjct: 125 gaagta 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatt 93
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| |||| || || | |||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacggag 129
Query: 108 ggagta 113
||||||
Sbjct: 130 ggagta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcat 54
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||| |||| | ||||| |||| |||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcat 86
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
|||||||||| | |||||||||||||||||||||||||
Sbjct: 42 aatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| ||||| | ||| ||||||| || | |||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 108 ggagta 113
| ||||
Sbjct: 126 gaagta 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatt 94
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| ||| |||| ||||| | ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||||||| |||| ||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcat 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 71 tgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
|||| ||||||| || | |||||||||||||||||||| ||||
Sbjct: 100 tgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||| | |||| ||||||| ||| ||| || | |||||||||||||||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| |||||||||| | |||||| ||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcat 109
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 70 gtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattc 51
|||||||||||||| |||||||||| | |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattc 52
Score = 48.1 bits (24), Expect = 3e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 50 tcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggg 109
||||||||||| ||| |||||| ||||||| || | ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggagga 9
Query: 110 agta 113
||||
Sbjct: 8 agta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||| || | |||| ||||||||||||||||||||||
Sbjct: 121 aatgctagaatgacttatattgtgaaacggagggagtagt 160
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || ||| ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagtagt 115
| ||||||
Sbjct: 10 gaagtagt 3
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcatt 41
||||||||||||||| |||||||||| | ||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||| |||||||| || |||||||| || || | |||||||| ||||||||||
Sbjct: 70 attcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaacggag 11
Query: 108 ggagtagt 115
||||||||
Sbjct: 10 ggagtagt 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | |||||||| | ||||||||||| | ||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcat 87
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 55 aacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
|||||| |||| |||||| ||||||| || | ||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 2 gctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||||| ||||| |||| | ||||||||| |||||||||||
Sbjct: 134 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcat 83
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||||| |||||| || | |||| ||||||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacggag 126
Query: 108 ggagtag 114
| |||||
Sbjct: 127 gaagtag 133
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 74 gcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||| |||| |||||||| ||||||||||||||||
Sbjct: 44 gcaatgctagaaagacttacattatgaaacggagggagta 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgc 43
|||| ||||||||| | |||||||| ||||||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcattgc 44
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagc 38
|||||||||||||| | |||||||| |||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagc 39
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccac 47
|||||||||||||| | | | |||||||||||||||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgcccac 44
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 70 gtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||||||| ||||||||| | | ||||||||||| ||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 51 cattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggaggga 110
||||||||| ||||| ||||| | ||||||| || | |||||||||||||||||||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 111 gtag 114
||||
Sbjct: 7 gtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
||||||||||||||| |||||||||| | |||||||||| | ||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacatt 51
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||| ||||||| || | |||||||| |||||||||||||||||
Sbjct: 93 atgtgggaaatgctacaatgacttacattatgaaacggagggagtag 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| | |||||||| | || ||||||| |||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcat 89
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||| ||||| |||| ||||| | ||||||| || | |||||||||||||||||||
Sbjct: 93 attcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 108 gga 110
|||
Sbjct: 153 gga 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggaggga 110
||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggaggga 8
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
|||||||||||||||||||| |||| | |||||||||| | ||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatt 47
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcatt 41
||||||||||||||| |||||||||| | ||||||||||
Sbjct: 132 ctacttcctccgtttcacaatgtaagtcattctagcatt 94
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||| || | |||||||||||||||||||| ||||||
Sbjct: 94 aatgctagaatgacttacattgtgaaacggaggaagtagt 133
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| | | ||||||||||||||||| |||||||||||
Sbjct: 4 ctacttcctccgtttcttattataagactttctagcattacccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| ||||| |||||| |||||||| ||||||||| | | |||||| |||
Sbjct: 70 attcattaacatatatatgaatgtggacaatgctagaaagtcttataatatgaaacagag 129
Query: 108 ggagta 113
| ||||
Sbjct: 130 gaagta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||| |||| | | | |||||||||||||||||| ||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcat 86
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| |||||| |||| || || | |||||||||||||||||||
Sbjct: 93 attcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacggag 152
Query: 108 ggagtag 114
|||||||
Sbjct: 153 ggagtag 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcat 54
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||| |||| ||||||| ||||||| || | |||| ||||||||||||||
Sbjct: 70 attcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacggag 11
Query: 108 ggagtag 114
| |||||
Sbjct: 10 gaagtag 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||||||||| ||||| |||| | || ||||||| |||||||||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| ||||| ||||| ||||||| || | |||| ||||||||||||||
Sbjct: 93 attcattatcatcaatataaatgtgaaaaatgctagaatggcttatattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtc 89
||||||||||||| |||| ||||||||||||||| ||||||
Sbjct: 42 attcattaacatccatatgaatgtgggcaatgctagaaagtc 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 28 gactttctagcattgcccacattcat 53
||||||||||||||||||||||||||
Sbjct: 1 gactttctagcattgcccacattcat 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtc 89
||||||||||||| |||| |||||||||||| || ||||||
Sbjct: 71 attcattaacatccatatgaatgtgggcaatgttagaaagtc 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 28 gactttctagcattgcccacattcat 53
||||||||| ||||||||||||||||
Sbjct: 112 gactttctaacattgcccacattcat 87
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagtag 114
||||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||| ||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||||||||
Sbjct: 119 aatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||||||||
Sbjct: 79 aatgctagaatgacttacattgtgaaacggagggagta 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagtagt 115
||||||| || | ||| |||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttgcattgtgaaacggagggagtagt 3
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagtag 114
||||||||||||||||||||||||||
Sbjct: 101 cttacattgtgaaacggagggagtag 126
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 1 agctacttcctccgttttacaatgtaagactttctagcattgcccacatt 50
||||||||||||||||| ||||| |||| | |||||||||| |||||||
Sbjct: 2 agctacttcctccgtttcacaatataagtcattctagcattttccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagtag 114
||||||| || | |||||||| |||||||||||||||||
Sbjct: 89 aatgctagaatgacttacattatgaaacggagggagtag 127
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||||||| | |||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcat 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||| |||| |||| ||||| | ||||||| || | |||| ||||||||||||||
Sbjct: 70 attcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 129
Query: 108 ggagta 113
| ||||
Sbjct: 130 gaagta 135
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | |||||| ||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcat 54
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | || ||| ||| |||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcat 60
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||| |||||| | |||||||||||||||||||| ||||
Sbjct: 64 atgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gctacttcctccgttttacaatgtaagactttctagca 39
|||||||||||||||| |||||||||| | ||||||||
Sbjct: 3 gctacttcctccgtttcacaatgtaagtcattctagca 40
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagtag 114
|||||||||||||||||||| |||||
Sbjct: 29 cttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||| || || | |||||||||||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggag 151
Query: 108 ggagta 113
||||||
Sbjct: 152 ggagta 157
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||| | |||| || || | ||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacggaa 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||||||||
Sbjct: 121 aatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacat 49
||||||||||||| |||||||||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 70 cttacattgtgaaacggagggagta 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 66 atatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||||| ||||||| || | ||||||||||| |||||||| ||||
Sbjct: 52 atatgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||| |||||||||||| || || | ||||||| || | |||||||| ||||||||||
Sbjct: 70 attcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacggag 11
Query: 108 ggagta 113
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagtag 114
||||||||||||||||||||||||||
Sbjct: 101 cttacattgtgaaacggagggagtag 126
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 3 ctacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||| ||||||||| |||||||||| |||||||||| ||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcat 76
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||| ||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcat 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagtagt 115
|||||||| ||||||||||||||||||
Sbjct: 131 cttacattatgaaacggagggagtagt 157
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatt 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || |||| ||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 89 aatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| || | || ||||||| || | |||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacggag 11
Query: 108 ggagta 113
| ||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||| || |||||| || | |||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaacggag 152
Query: 108 ggagta 113
||||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| |||| |||||| ||| |||||| | |||||||||||||||||||| ||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 112 ta 113
||
Sbjct: 6 ta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 86 cttacattgtgaaacggagggagta 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||||||| | || ||| ||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcat 54
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
|||||||||||||||||| |||||| || ||||| ||||||||| | ||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacggag 133
Query: 108 ggagta 113
| ||||
Sbjct: 134 gaagta 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| | | ||||||||||||||| || ||||||||||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcat 90
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 52 attaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggag 111
||||||||| |||| || |||| |||||||||| | ||| |||||||||||||||| ||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacggaggaag 134
Query: 112 ta 113
||
Sbjct: 135 ta 136
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattca 52
|||||||||||||| |||||||||| |||||| ||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| |||||| ||| | || ||||||| |||| ||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcat 87
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| |||||| ||| |||||| | |||| ||||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 108 ggagta 113
| ||||
Sbjct: 125 gaagta 130
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcatt 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 97 aatgctagaaggacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttac 93
|||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 46 attcattaacatctatatgaatgtgggtgatgctagaaagtcttac 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 24 gtaagactttctagcattgcccacattcat 53
||||||||||||||||| |||||||||||
Sbjct: 1 gtaagactttctagcatcacccacattcat 30
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcatt 41
|||||||||||||| |||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 48 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 107
||||||||||||| |||| ||||| | ||||||| || | |||| ||||||||||||||
Sbjct: 62 attcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 121
Query: 108 ggagta 113
| ||||
Sbjct: 122 gaagta 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||||||||||||| ||||| |||| | |||||||||| | |||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcat 78
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 4 tacttcctccgttttacaatgtaagactttctagcattgcccacattcat 53
|||| ||||||||| ||||| |||| | |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| ||||||| || | |||| ||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 89 cttacattgtgaaacggagggagta 113
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 9 cctccgttttacaatgtaagactttctagcattgcccacattcat 53
||||||||| | |||||||| | |||||||||| |||||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcat 109
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 68 atgtgggcaatgctaaaaagtcttacattgtgaaacggagggagt 112
||||||| ||||||| || | |||||||| |||||||||||||||
Sbjct: 113 atgtgggaaatgctagaatgacttacattatgaaacggagggagt 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 76 aatgctaaaaagtcttacattgtgaaacggagggagta 113
||||||| || | |||||||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagta 5
