miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgctcttttc 51
|||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 44 ggtttcaggcagtctccttggctatcttgacatgcttttttc 3
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctg 191
||||||| | ||| ||||||||||||||||||||||
Sbjct: 181 aagagtcatgtttagtagccaaggatgacttgcctg 146
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| |||||||||||||||||||||||||||
Sbjct: 139 aagagtcttgtttggtagccaaggatgacttgcctgc 103
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 11 gtttcaggcagtctccttggctaccttgacatgctcttt 49
||||||||||||||||||||||| |||||| |||||||
Sbjct: 43 gtttcaggcagtctccttggctaacttgactggctcttt 5
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| |||||||||||||||||||||||||||
Sbjct: 135 aagagtcttgtttggtagccaaggatgacttgcctgc 99
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgctcttt 49
|||||||||| ||||||||||||| ||||||| |||||||
Sbjct: 44 ggtttcaggcggtctccttggctaacttgacaggctcttt 5
>RF00645;MIR169_2;AY551201.1/49-220 3702:Arabidopsis thaliana (thale
cress)
Length = 172
Score = 63.9 bits (32), Expect = 8e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgct 45
|||||||||||||||||||||||| |||||||||||
Sbjct: 135 ggtttcaggcagtctccttggctatcttgacatgct 170
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 gtagccaaggatgacttgcctg 191
||||||||||||||||||||||
Sbjct: 12 gtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 155 gaagagtcttatttggtagccaaggatgacttgcctgca 193
||||||||| ||||||||||||||||||||||||||||
Sbjct: 148 gaagagtctcgtttggtagccaaggatgacttgcctgca 110
>RF00865;MIR169_5;ABIM01014270.1/4571-4728 3649:Carica papaya
(papaya)
Length = 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgca 193
||||||||| ||||||||||||| ||||||||||||||
Sbjct: 154 aagagtcttgtttggtagccaagaatgacttgcctgca 117
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 caggcagtctccttggctaccttgacatgctcttttctt 53
||||||||| |||||||| ||||||| |||||||||||
Sbjct: 39 caggcagtcatcttggctaacttgacaggctcttttctt 1
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 154 agaagagtcttatttggtagccaaggatgacttgcctg 191
|||||| || ||||||||||||||||||||||||||||
Sbjct: 165 agaagaatcatatttggtagccaaggatgacttgcctg 128
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 154 agaagagtcttatttggtagccaaggatgacttgcctg 191
|||||| || ||||||||||||||||||||||||||||
Sbjct: 163 agaagaatcatatttggtagccaaggatgacttgcctg 126
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus trichocarpa
Length = 126
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctgc 192
|||||| |||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctgc 34
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgctct 47
|||||||||| ||||||||||||| ||||||| |||||
Sbjct: 89 ggtttcaggcggtctccttggctaacttgacaggctct 126
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctgc 192
|||||| |||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctgc 34
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 gtttcaggcagtctccttggctaccttgac 40
||||||||||||||||||||||| ||||||
Sbjct: 94 gtttcaggcagtctccttggctaacttgac 123
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 164 tatttggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||||||
Sbjct: 153 tatttggtagccaaggatgacttgcctgc 125
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| |||| ||||||||||||||||||||||
Sbjct: 154 aagagtcttgtttgatagccaaggatgacttgcctgc 118
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 15 caggcagtctccttggctaccttgacatgctctt 48
||||||||||||||||||| | ||||| ||||||
Sbjct: 39 caggcagtctccttggctagcctgacaggctctt 6
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| |||| ||||||||||||||||||||||
Sbjct: 160 aagagtcttgtttgatagccaaggatgacttgcctgc 124
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| |||| ||||||||||||||||||||||
Sbjct: 148 aagagtcttgtttgatagccaaggatgacttgcctgc 112
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana (thale
cress)
Length = 152
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 164 tatttggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||||||
Sbjct: 6 tatttggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus trichocarpa
Length = 210
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctg 191
|||||| ||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 166 tttggtagccaaggatgacttgcctgca 193
||||||||||||||||||||||||||||
Sbjct: 121 tttggtagccaaggatgacttgcctgca 94
Score = 44.1 bits (22), Expect = 8e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 16 aggcagtctcc-ttggctaccttgacatgctcttttct 52
||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 39 aggcagtctcctttggctaacttgacaggctcttttct 2
>RF00865;MIR169_5;AB016889.1/45011-45196 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgct 45
|||||||||||||||| ||||||| |||||||||||
Sbjct: 44 ggtttcaggcagtctctttggctatcttgacatgct 9
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 170 gtagccaaggatgacttgcctg 191
||||||||||||||||||||||
Sbjct: 168 gtagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AY551203.1/210-25 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgct 45
|||||||||||||||| ||||||| |||||||||||
Sbjct: 44 ggtttcaggcagtctctttggctatcttgacatgct 9
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcctgca 193
||||||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcctgca 36
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 164 tatttggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||||||
Sbjct: 5 tatttggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AY551203.1/30-206 3702:Arabidopsis thaliana (thale
cress)
Length = 177
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgct 45
|||||||||||||||| ||||||| |||||||||||
Sbjct: 138 ggtttcaggcagtctctttggctatcttgacatgct 173
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 164 tatttggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||||||
Sbjct: 5 tatttggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AB016889.1/45191-45017 3702:Arabidopsis thaliana
(thale cress)
Length = 175
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgct 45
|||||||||||||||| ||||||| |||||||||||
Sbjct: 138 ggtttcaggcagtctctttggctatcttgacatgct 173
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 gtagccaaggatgacttgcctg 191
||||||||||||||||||||||
Sbjct: 14 gtagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcctgca 193
||||||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctgca 35
>RF00865;MIR169_5;AARH01000472.1/145345-145210 3694:Populus
trichocarpa
Length = 136
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgctctt 48
|||||||||||||||||||||||| |||||| ||||||
Sbjct: 44 ggtttcaggcagtctccttggctaggttgacaggctctt 6
>RF00865;MIR169_5;AARH01003823.1/108401-108536 3694:Populus
trichocarpa
Length = 136
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgctctt 48
|||||||||||||||||||||||| |||||| ||||||
Sbjct: 44 ggtttcaggcagtctccttggctaggttgacaagctctt 6
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 166 tttggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||||
Sbjct: 144 tttggtagccaaggatgacttgcctgc 118
>RF00645;MIR169_2;ABIM01014270.1/4721-4577 3649:Carica papaya
(papaya)
Length = 145
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctgca 193
|||||| ||||||||||||| ||||||||||||||
Sbjct: 1 agtcttgtttggtagccaagaatgacttgcctgca 35
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcctgc 35
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcc 189
||||||| | ||||||||||||||||||||||||
Sbjct: 129 aagagtcgtgtttggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcc 189
||||||| | ||||||||||||||||||||||||
Sbjct: 128 aagagtcgtgtttggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcc 189
|||||| || ||||||||||||||||||||||||
Sbjct: 123 aagagtgttgtttggtagccaaggatgacttgcc 90
>RF00645;MIR169_2;AARH01003823.1/108529-108407 3694:Populus
trichocarpa
Length = 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgctct 47
|||||||||||||||||||||||| |||||| |||||
Sbjct: 86 ggtttcaggcagtctccttggctaggttgacaagctct 123
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctgc 192
|||||| |||| ||||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus trichocarpa
Length = 151
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctgc 192
|||||| |||| ||||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AARH01000472.1/145217-145339 3694:Populus
trichocarpa
Length = 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 ggtttcaggcagtctccttggctaccttgacatgctct 47
|||||||||||||||||||||||| |||||| |||||
Sbjct: 86 ggtttcaggcagtctccttggctaggttgacaggctct 123
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctgc 192
|||||| |||| ||||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctgc 34
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 129 tttggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcctgc 93
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcctgc 99
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 126 tttggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| | || ||||||||||||||||||||||
Sbjct: 145 aagagtcttgtctgatagccaaggatgacttgcctgc 109
>RF00865;MIR169_5;AASG02003632.1/6431-6569 3988:Ricinus communis
(castor bean)
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| |||| |||||||| |||||||||||||
Sbjct: 135 aagagtcttgtttgatagccaagaatgacttgcctgc 99
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcctgc 192
||||||||| | || ||||||||||||||||||||||
Sbjct: 159 aagagtcttgtctgatagccaaggatgacttgcctgc 123
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||
Sbjct: 115 tggtagccaaggatgacttgcctgc 91
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgcct 87
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctgc 35
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctgc 33
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctgc 33
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 11 tttggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis vinifera
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctgc 192
|||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcct 190
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 166 tttggtagccaaggatgacttgcc 189
||||||||||||||||||||||||
Sbjct: 113 tttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 155 gaagagtcttatttggtagccaaggatgacttgcct 190
|||||||| | |||| ||||||||||||||||||||
Sbjct: 152 gaagagtcatgtttgatagccaaggatgacttgcct 117
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcctg 93
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 131 tggtagccaaggatgacttgcctg 108
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcctg 88
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 140 tggtagccaaggatgacttgcctg 117
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcctg 101
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcctg 104
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcc 189
||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcc 189
||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 166 tttggtagccaaggatgacttgcc 189
||||||||||||||||||||||||
Sbjct: 10 tttggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum bicolor
(sorghum)
Length = 139
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcctg 36
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa Japonica
Group
Length = 131
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa Japonica
Group
Length = 115
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcctg 29
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcctg 191
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcct 88
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 112 tggtagccaaggatgacttgcct 90
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 128 tggtagccaaggatgacttgcct 106
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcct 190
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00865;MIR169_5;AARH01004262.1/629-776 3694:Populus trichocarpa
Length = 148
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 155 gaagagtcttatttggtagccaagga 180
|||||||||| |||||||||||||||
Sbjct: 145 gaagagtcttgtttggtagccaagga 120
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 168 tggtagccaaggatgacttgcc 189
||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcc 89
>RF00865;MIR169_5;AASG02002697.1/23918-24046 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 8e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 156 aagagtcttatttggtagccaaggatgacttgcc 189
||||||||| |||| |||||||||||||||||||
Sbjct: 125 aagagtctt-tttgttagccaaggatgacttgcc 93
>RF00865;MIR169_5;AP008208.1/18658095-18658282 39947:Oryza sativa
Japonica Group
Length = 188
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 169 ggtagccaaggatgacttgcct 190
||||||||||||||||||||||
Sbjct: 172 ggtagccaaggatgacttgcct 151
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 tggtagccaaggatgacttgcc 189
||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcc 34
>RF00645;MIR169_2;AASG02003632.1/6562-6437 3988:Ricinus communis
(castor bean)
Length = 126
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 159 agtcttatttggtagccaaggatgacttgcctgc 192
|||||| |||| |||||||| |||||||||||||
Sbjct: 1 agtcttgtttgatagccaagaatgacttgcctgc 34
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tagccaaggatgacttgcctgc 192
||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tagccaaggatgacttgcctgc 192
||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AP004062.3/84631-84457 39947:Oryza sativa Japonica
Group
Length = 175
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 ggtagccaaggatgacttgcct 190
||||||||||||||||||||||
Sbjct: 10 ggtagccaaggatgacttgcct 31
