miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00638;MIR159;CAAP02000074.1/111494-111682 29760:Vitis vinifera
Length = 189
Score = 367 bits (185), Expect = e-101
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1 gggcttgtgggagcttctttacactccagaactgaaaggagatactactgctggttcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gggcttgtgggagcttctttacactccagaactgaaaggagatactactgctggttcatg 62
Query: 61 aaaacctatggctgcattctctatactgaaattttgtatacaaactatgggtttgcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aaaacctatggctgcattctctatactgaaattttgtatacaaactatgggtttgcatga 122
Query: 121 acttggagaagtgtttgcttttatcttttctggccttggagtgaagggagctctcataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 acttggagaagtgtttgcttttatcttttctggccttggagtgaagggagctctcataac 182
Query: 181 cgatc 185
|||||
Sbjct: 183 cgatc 187
>RF00638;MIR159;AM454957.2/557-754 29760:Vitis vinifera
Length = 198
Score = 107 bits (54), Expect = 5e-23
Identities = 115/134 (85%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 48 ctgctggttcatgaaaacctatggctgcattctctatactgaaattttgtatacaaacta 107
|||||||||||||| ||||||||||||| | |||| | ||| |||| | |||||||
Sbjct: 60 ctgctggttcatgagtacctatggctgcacaatatatatagcaatgttgtgtgcaaacta 119
Query: 108 tgggtttgcatgaacttggagaagtgtttgcttttatcttttctggccttggagtgaagg 167
||||| ||||||| || ||||||||| |||| || |||||| ||||||||||||||||||
Sbjct: 120 tgggtgtgcatgacctcggagaagtggttgccttgatcttt-ctggccttggagtgaagg 178
Query: 168 gagctctcataacc 181
||||||||||||||
Sbjct: 179 gagctctcataacc 192
