miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;CAAP02000146.1/169306-169201 29760:Vitis vinifera
Length = 106
Score = 208 bits (105), Expect = 1e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 ggggtcgaattgagccaaggatggcttgccgtcatctgcagcaagagttggagactttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggggtcgaattgagccaaggatggcttgccgtcatctgcagcaagagttggagactttta 61
Query: 61 actgtgcgtgcacggttagtcatccttggctcatttggcccttct 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 actgtgcgtgcacggttagtcatccttggctcatttggcccttct 106
>RF00645;MIR169_2;CAAP02002239.1/1615-1515 29760:Vitis vinifera
Length = 101
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 2 gggtcgaattgagccaaggatggcttgccgtc 33
|||| |||||||||||||||||||||||||||
Sbjct: 2 gggtggaattgagccaaggatggcttgccgtc 33
>RF00645;MIR169_2;CAAP02000146.1/86923-86822 29760:Vitis vinifera
Length = 102
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 7 gaattgagccaaggatggcttgccgtcatctgcagcaag 45
||||||||||||||||| ||||||| || ||||||||||
Sbjct: 7 gaattgagccaaggatgacttgccggcagctgcagcaag 45
>RF00645;MIR169_2;AM466421.1/3134-3032 29760:Vitis vinifera
Length = 103
Score = 52.0 bits (26), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatggcttgccgtcatctgcagcaag 45
|||||||||||||| ||||||| ||||||| |||||
Sbjct: 10 ttgagccaaggatgacttgccgccatctgcmgcaag 45
>RF00645;MIR169_2;CAAP02000146.1/54492-54392 29760:Vitis vinifera
Length = 101
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 7 gaattgagccaaggatggcttgccgtcatctgcagcaag 45
|||| |||||||||||| ||||||| || ||||||||||
Sbjct: 7 gaatagagccaaggatgacttgccggcaactgcagcaag 45
