miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 133 bits (67), Expect = 8e-31
Identities = 103/114 (90%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 26 ataagactttctatcattgcctacatttatatagatggtagataatttaggcacatatat 85
||||||||||||| ||||||| ||||| ||||||||| || ||| |||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Query: 86 gt--ctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 137
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atatctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
Score = 101 bits (51), Expect = 3e-21
Identities = 99/114 (86%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 26 ataagactttctatcattgcctacatttatatagatggtagataatttaggcacatatat 85
||||||||||||| ||||||| ||||| ||||| ||| || ||| ||| | ||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 86 gt--ctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 137
|| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 119/136 (87%), Gaps = 2/136 (1%)
Strand = Plus / Minus
Query: 6 tactacctctatttcaggttataagactttctatcattgcctacatttatatagatggta 65
||||||||| ||||| |||||||||||||||| ||||||| ||||| ||||| ||| ||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtta 99
Query: 66 gataatttaggcac--atatatgtctagattcattaacatatatatgaatgtgggcaatg 123
||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 98 atgaatcttggcacatatatatgtctagatttattaacatatatatgaatgtgggcaatg 39
Query: 124 ctagaaagtcttataa 139
| ||||||||||||||
Sbjct: 38 ccagaaagtcttataa 23
Score = 115 bits (58), Expect = 2e-25
Identities = 109/125 (87%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 17 tttcaggttataagactttctatcattgcctacatttatatagatggtagataatttagg 76
||||| ||||||||||||||| ||||||| ||||| ||||| ||| || ||| |||
Sbjct: 16 tttcaagttataagactttctggcattgcccacattcatatatatgttaataaatctaga 75
Query: 77 cacatatatgt--ctagattcattaacatatatatgaatgtgggcaatgctagaaagtct 134
|| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 catatatatgtgccaagattcattaacatatatatgaatgtgggcaatgctagaaagtct 135
Query: 135 tataa 139
|||||
Sbjct: 136 tataa 140
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 125 bits (63), Expect = 2e-28
Identities = 102/114 (89%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 26 ataagactttctatcattgcctacatttatatagatggtagataatttaggcacatata- 84
||||||||||||| ||||||| ||||| ||||||||| || ||| |||||||| |||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatac 55
Query: 85 -tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 137
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 88 ctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 137
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 117 bits (59), Expect = 5e-26
Identities = 101/114 (88%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 26 ataagactttctatcattgcctacatttatatagatggtagataatttaggcacatat-- 83
||||||||||||| ||||||| ||||| ||||||||| || ||| |||||| ||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgt 55
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 137
||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 54 atgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
Score = 109 bits (55), Expect = 1e-23
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 26 ataagactttctatcattgcctacatttatatagatggtagataatttaggca--catat 83
||||||||||||| ||||||| | ||| ||||| ||| || ||| |||||| |||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 137
||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 atgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 117 bits (59), Expect = 5e-26
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataataca 143
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 144 aagcggaggaagtat 158
|| ||||||||||||
Sbjct: 113 aaacggaggaagtat 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 108 atgaatgtgggcaatgctagaaagtcttataata 141
||||||||||||||||||||||| ||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataata 21
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatg 62
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 108 ttataagactttctagcattgcccacattcatatagatg 70
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 82 atatatgtctagattcattgacatatatatgaatgtgggcaatgttagaaagtcttataa 23
Query: 140 tacaaagcggaggaagta 157
|| || |||||||||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 99/120 (82%), Gaps = 2/120 (1%)
Strand = Plus / Plus
Query: 24 ttataagactttctatcattgcctacatttatatagatggtagataatttaggcacatat 83
||||||||||||||| ||||||| ||||| ||||| ||| | ||| ||| || ||||
Sbjct: 23 ttataagactttctaacattgcccacattcatatatatgtcaatgaatctagacatatat 82
Query: 84 atgtct--agattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
|||| | ||||||||| |||| |||||||| ||| |||| ||||||||||||||||||
Sbjct: 83 atgtgtttagattcattgacatctatatgaagatggacaattctagaaagtcttataata 142
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 81 atatatgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataa 140
Query: 140 tacaaagcggaggaagta 157
|| || |||||||||||
Sbjct: 141 tatgaaacggaggaagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 117/137 (85%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatggtagataatttaggcacatat 83
||||||||||||||| ||||||| ||||| ||||||||| || ||| ||| || ||||
Sbjct: 140 ttataagactttctagcattgcccacattcatatagatgctaatgaatctagacatatat 81
Query: 84 a--tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
| ||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 80 atgtgtataggttcattaacatctatatgattgtgggcaatgctagaaagtcttataata 21
Query: 142 caaagcggaggaagtat 158
|| |||||| |||||
Sbjct: 20 tgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 115 bits (58), Expect = 2e-25
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 85 cacatatatatatagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Query: 137 taatacaaagcggaggaagtat 158
||||| || ||||||||||||
Sbjct: 25 taatatgaaacggaggaagtat 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaaagcg 148
||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 149 gaggaagtat 158
|||| |||||
Sbjct: 152 gagggagtat 161
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 113 bits (57), Expect = 8e-25
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 55 atatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataa 114
Query: 140 t 140
|
Sbjct: 115 t 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 100 acatatatatgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagta 157
||||||||||||||||||| ||| |||||||||||||||||| || |||||||||||
Sbjct: 62 acatatatatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 113 bits (57), Expect = 8e-25
Identities = 106/120 (88%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 24 ttataagactttctatcattgcctacatttatatagatggtagat-aatttaggcacata 82
||||||||||||||| |||| || ||||| ||||||||| || || ||| ||| ||| ||
Sbjct: 23 ttataagactttctagcattacccacattcatatagatgttaaattaatctagacaccta 82
Query: 83 --tatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataat 140
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 83 catatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataat 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 122/145 (84%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 17 tttcaggttataagactttctatcattgcctacatttatatagatggtagataatttagg 76
|||||| ||||||||||||||| ||||||| ||||| ||||||||| || ||| |||
Sbjct: 148 tttcagattataagactttctagcattgcccacattcatatagatgttaatgaatctaga 89
Query: 77 cacatata--tgtctagattcatt-aacatatatatgaatgtgggcaatgctagaaagtc 133
| || || |||||||||| ||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 88 tatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaatgctagaaagtc 29
Query: 134 ttataatacaaagcggaggaagtat 158
|||||||| || |||||| |||||
Sbjct: 28 ttataatatgaaacggagggagtat 4
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 107 bits (54), Expect = 5e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataata 21
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 24 ttataagactttctatcattgcctacatttatata 58
||||||||||||||| ||||||| ||||| |||||
Sbjct: 23 ttataagactttctagcattgcccacattcatata 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 caatgctagaaagtcttataata 141
|||||||||||||||||||||||
Sbjct: 90 caatgctagaaagtcttataata 112
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 107 bits (54), Expect = 5e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataata 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 119 caatgctagaaagtcttataata 141
|||||||||||||||||||||||
Sbjct: 43 caatgctagaaagtcttataata 21
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatata 58
||||||||||||||| ||||||| ||||| |||||
Sbjct: 110 ttataagactttctagcattgcccacattcatata 76
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 78 cacatatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 137
Query: 137 taatacaaagcggaggaagtat 158
| || || ||||||||||||
Sbjct: 138 cattatgaaacggaggaagtat 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| ||||||| ||||| ||||||||| || ||| ||| | |||| ||
Sbjct: 137 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 78
Query: 87 t--ctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
| |||||||||||||||| |||||||||||| | ||||||| |||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtctta 26
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 85 cacatatatttctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Query: 137 taatacaaagcggaggaagtat 158
| || || ||||||||||||
Sbjct: 25 cattatgaaacggaggaagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| ||||||| ||||| ||||||||| || ||| ||| | |||| ||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 85
Query: 87 t--ctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
| |||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtctta 137
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataata 119
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 99 aacatatatatgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagta 157
|||||||||||||||||||| |||||||||||||||||||||| || |||||||||||
Sbjct: 63 aacatatatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 103 bits (52), Expect = 7e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||
Sbjct: 61 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 120
Query: 140 tacaaagcggaggaagtatt 159
|| || |||||| ||||||
Sbjct: 121 tatgaaacggagggagtatt 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 102 atatatatgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagtat 158
||||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||
Sbjct: 60 atatatatgaatgtgggcaatactagatagtcttataatataaaacggaggaagtat 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatg 62
||||||||||||||||||||||| ||||| |||||||||
Sbjct: 120 ttataagactttctatcattgcccacattcatatagatg 82
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 83 tatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatac 142
|||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 79 tatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatat 20
Query: 143 aaagcggaggaagtat 158
|| ||||||||||||
Sbjct: 19 gaaacggaggaagtat 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 104 atatatgaatgtgggcaatgctagaaagtcttataat 140
|||||||||||||||||||||||||||||||||||||
Sbjct: 81 atatatgaatgtgggcaatgctagaaagtcttataat 117
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 6 tactacctctatttcaggttataagactttctatcattgcctacatttatata 58
||||||||| ||||||| ||||||||||||||| ||||||| ||||| |||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatata 82
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 24 ttataagactttctatcattgcctacatttatatagatg 62
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 23 ttataagactttctagcattgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 79 catatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 80 catatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtctta 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatata-- 84
|||||||||||| |||||| ||||| ||||||||| || ||| ||| || ||||
Sbjct: 137 taagactttctagtattgcccacattcatatagatgttaatgaatctagacatatatgcg 78
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||| |||||||||||| ||||||||| |||||| | |||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtctta 26
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 85 cacatatatgtctagattcattaacatctatatgaatgtagacaatgctagaaagtctta 26
Query: 137 taatacaaagcggaggaagtat 158
| || || ||||||||||||
Sbjct: 25 cattatgaaacggaggaagtat 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| ||||| ||||||| ||||||||| || ||| ||| || |||| ||
Sbjct: 26 taagactttctagcattgtctacattcatatagatgttaatgaatctagacatatatgtg 85
Query: 87 tct--agattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
| | |||||||||||||| ||||||||||||| ||| |||||||||||||
Sbjct: 86 tgtttagattcattaacatctatatgaatgtggacaaacctagaaagtctta 137
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataata 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 109 tgaatgtgggcaatgctagaaagtcttataata 141
|||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataata 21
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatg 62
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatg 76
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataat 140
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | |
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 141 acaaagcggaggaagta 157
| || |||||||||||
Sbjct: 21 atgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 97/112 (86%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| | ||||| |||||||||||||| || ||| ||| || |||| ||
Sbjct: 26 taagactttctagcgttgcccacatttatatagatactaatgaatctagacatatatgtg 85
Query: 87 t--ctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 86 tgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtctta 137
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcaca--tata 84
|||||||||||| ||||||| ||||| ||||| ||| || ||| |||||||| ||||
Sbjct: 137 taagactttctagcattgcccacattcatatatatgctaatgaatctaggcacacatata 78
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 77 tgtctagattcattagtatctatataaatgtgggcaacgctagaaagtctta 26
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataata 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 109 tgaatgtgggcaatgctagaaagtcttataata 141
|||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataata 21
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatg 62
||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatg 76
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtctta 26
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||| |||||||||| | || |||||||||||||||||||||| |||||||||
Sbjct: 78 cacatatatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtctta 137
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 93.7 bits (47), Expect = 7e-19
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| ||||||||| ||| |||| |||| || ||| |||| | || ||
Sbjct: 26 taagactttctagcattgcctatattcatattgatgttaatgaatctaggtatatgcgtg 85
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaaag 146
||||||||||||||||| ||||||||||||| |||||||||||||||||| | || ||
Sbjct: 86 tctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaa 145
Query: 147 cggaggaagta 157
|||||||||||
Sbjct: 146 cggaggaagta 156
Score = 67.9 bits (34), Expect = 4e-11
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| ||||| | ||||| ||||| ||| || ||| ||| ||| ||||
Sbjct: 135 taagactttctagcattgtccacattcatataaatgttaatgaatctagacacgcatata 76
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||| |||||||| | ||||||||||||||||||||
Sbjct: 75 cctagattcattaacatcaatatgaatataggcaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtctta 113
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 105 tatatgaatgtgggcaatgctagaaagtcttataata 141
|||||||||||| |||||||||||||||||| ||||
Sbjct: 57 tatatgaatgtgaacaatgctagaaagtcttacaata 21
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatg 62
|||||||||||| ||||||| ||||| |||||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatg 78
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 79 catatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 80 catatatgtctagattcattaacatctatatgaatatgggcaatactagaaagtctta 137
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||| |||||||||||| ||||||||| |||||| | |||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtctta 26
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 78 acatatatgtctagattcattaacatatatatgaatgtgggcaatgctag 127
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 acatatatatctagattcattaacatatatatgaatgtgggcaatgctag 90
Score = 87.7 bits (44), Expect = 4e-17
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatg 123
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atatatgtctagattcattaacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||
Sbjct: 85 cacatatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgactta 26
Query: 137 ta 138
||
Sbjct: 25 ta 24
Score = 52.0 bits (26), Expect = 2e-06
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 25 tataagactttctatcattgcctacatttatatagatggtagataatttaggcacatata 84
|||||| | ||||| ||||||| ||||| ||||||||| || ||| | | || ||||
Sbjct: 24 tataagtcattctagcattgcccacattcatatagatgttaatgaatctggacatatatg 83
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|| |||||||||||| || |||| ||||||||||||| |||||| | ||||||
Sbjct: 84 tggctagattcattagtatctataagaatgtgggcaatcctagaatgacttata 137
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |
Sbjct: 82 atatatgtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacat 23
Query: 140 tacaaagcggaggaagta 157
|| || |||||||||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 81 atatgtgtctagattcattaacatctatatgaatatgagcaatgctagaaagtctta 137
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaa 144
||||||||||||||||||| ||||||||||||||||||||||||||| |||| | || |
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 145 agcggaggaagta 157
| |||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||| ||||||| ||||||| ||||| ||||||||| || ||| ||| |||| |||||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctagacacacatatg 85
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||| || |||||| | ||||||||| |||||||||
Sbjct: 86 tctagattcattaacatctagatgaatataagcaatgctacaaagtctta 135
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| ||||||| ||||| ||||||||| | ||| ||| || |||| ||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 87 t--ctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
| |||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 56 tgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttagg--cacatata 84
|||||||||||| ||||||| ||||| |||| ||| || ||| |||| ||||||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 65 tgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtctta 111
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 100 acatatatatgaatgtgggcaatgctagaaagtctta 136
|||| ||||||||||||| ||||||||||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtctta 26
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcacatatatg 86
|||||||||||| ||||||| ||||| | ||||||| || ||| ||| |||||||| |
Sbjct: 26 taagactttctagcattgcccacattcacatagatgctaatgaatctagacacatataag 85
Query: 87 tcta--gattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
| || ||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 86 tatatagattcattaacatctatatgaatgcgggcaatgctagaaagtctta 137
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||| ||||||||||||||| ||| ||| |||||||||||||||||||||||||||| |
Sbjct: 82 atatgtgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacat 23
Query: 140 tacaaagcggaggaagta 157
|| || |||||||||||
Sbjct: 22 tatgaaacggaggaagta 5
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaattctagaaagtcttataata 21
Score = 63.9 bits (32), Expect = 6e-10
Identities = 99/121 (81%), Gaps = 4/121 (3%)
Strand = Plus / Plus
Query: 6 tactacctctatttcaggttataagactttctatcattgcctacatttatatagatggta 65
|||| ||||| ||||| ||||||||||||||| |||||| ||||| ||||||||| ||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 66 gataatttaggcacatatatgtct----agattcattaacatatatatgaatgtgggcaa 121
||| || |||| |||||| | |||||||||||||| |||||||||||||||||
Sbjct: 65 atgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 122 t 122
|
Sbjct: 125 t 125
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaa 144
|||||||||||||| |||| ||| |||| ||||||||||||||||||||||||| || |
Sbjct: 86 tgtctagattcattgacatctatgtgaacgtgggcaatgctagaaagtcttatattatga 145
Query: 145 agcggaggaagta 157
|||||||||||||
Sbjct: 146 agcggaggaagta 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||| ||||||||| ||||||||||| || |||||||||||||||
Sbjct: 73 tagatccattaacatctatatgaatgtaaacagtgctagaaagtctta 26
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 100 acatatatatgaatgtgggcaatgctagaaagtctta 136
|||| ||||||||||||||||||||||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtctta 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatg 62
|||||||||||| ||||||| ||||| |||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatg 62
|||||||||||| ||||||| ||||| |||||||||
Sbjct: 121 taagactttctagcattgcccacattcatatagatg 86
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 4e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 95 cattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtctta 26
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatg 62
|||||||||||| ||||||| ||||| |||||||||
Sbjct: 119 taagactttctagcattgcccacattcatatagatg 84
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtctta 26
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||| ||||| | ||||||||| |||||||||||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtctta 137
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 55 atatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaa 104
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct: 82 atatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtctta 26
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtctta 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 108/133 (81%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttaggcaca--tata 84
|||||||||||| ||||||| ||||| ||||||||| || ||| ||| || ||||
Sbjct: 137 taagactttctaacattgcccacattcatatagatgctaatgaatctagacattattata 78
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaa 144
| | |||||| |||| ||| |||||||||||||| ||||||| ||||||||| | || |
Sbjct: 77 tatatagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatga 18
Query: 145 agcggaggaagta 157
| |||||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
|||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||
Sbjct: 77 tgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataata 21
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 99 aacatatatatgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagtat 158
||||| ||||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagtat 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatg 62
||||||||||||||| ||||| | ||||| |||||||||
Sbjct: 119 ttataagactttctagcattgtccacattcatatagatg 81
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||| ||||||||||||||| |||||| ||||||| |||||||||||||||||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata 117
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||| ||||||||||||||| |||||| ||||||| |||||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata 24
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 88 ctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtctta 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtctta 26
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 58 atatgtgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtctta 2
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||| |||| |||||||||||| | ||||||||||||||||
Sbjct: 57 atatatgtctagattcatttacatctatatgaatgtgtgtgatgctagaaagtctta 113
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtc 133
|||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtc 133
||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtctta 26
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||| ||| || |||||| ||||||||||||||||||||||
Sbjct: 83 atatgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtctta 137
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||| ||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtctta 87
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||| |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 119
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||| |||||||||||| |||||||||| ||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtctta 26
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||
Sbjct: 78 cacatatatatctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtctta 137
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||| |||||||| || ||| |||||||||||||||||||||||||
Sbjct: 82 tatatgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtctta 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||| ||||||||||||||| || ||||||| || ||| ||| |||||||||
Sbjct: 80 atatgtttagattcattaacatctaaatgaatggaggtaatactataaagtctta 26
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 83 atatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtctta 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||| ||||| ||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 81 tatatatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttata 24
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||| ||||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtctta 26
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/50 (90%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 89 tagattcattaac--atatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||| ||||||||| ||||| ||||||||| |||||||||
Sbjct: 90 tagattcattaacatatatatatgtatgtgagcaatgctaaaaagtctta 139
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||| || |||||| |||||||||||| |||||||||
Sbjct: 83 atatgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtctta 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||| | |||||| || || |||||||||||||||||||
Sbjct: 73 tagattcattaacgtctatatgtatatgagcaatgctagaaagtctta 26
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 80 atatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtctta 26
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||| ||||| ||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 82 tatatatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttata 139
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||| || |||||||||||||| |||| |||||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtctta 26
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||||| | |||| ||||||| | ||||| |||||||||||
Sbjct: 86 tagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttata 135
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 83 tatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtctta 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 98 taacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||| ||||| ||||||||||||||||||||||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtctta 26
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatg 62
|||||||||||| ||||||| |||||||||||||||
Sbjct: 26 taagactttctagcattgcccacatttatatagatg 61
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaaagcggag 151
|||||||| ||| ||||||||| |||| |||||||||||||||||||||| || |||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 152 gaagta 157
||||||
Sbjct: 109 gaagta 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 108 atgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagtat 158
|||||||||||||||| ||||||||||||||||| || |||||| |||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagtat 4
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 81 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 55 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 7
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 79 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||| |||||||||||| |||||||||| | ||||||||||
Sbjct: 82 atatatgtctacattcattaacatcaatatgaatgtagaaaatgctagaa 33
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 58 atatatgtctagattcattaatataaatatgaatgtgggaaatgctagaa 107
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||| |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 26
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 56 atatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 78 atgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtctta 26
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||| |||||| || ||| ||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtctta 137
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 105 tatatgaatgtgggcaatgctagaaagtcttataata 141
|||||||||||||||||||||||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataata 21
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 114 gtgggcaatgctagaaagtcttataatacaaagcggaggaagta 157
|||||||||||||||||||||||||||| || |||||||||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 24 ttataagactttctatcattgcctacatttatata 58
||||||||||||||| ||||||| ||||| |||||
Sbjct: 23 ttataagactttctagcattgcccacattcatata 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatat 57
||||||||||||||| ||||||| || |||||||
Sbjct: 86 ttataagactttctagcattgcccacgtttatat 53
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||||||| ||||||||| || |||||||||||||| ||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttata 24
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttata 121
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagt 132
|||||| |||||||||||| |||||||||||||||||||||| |||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagt 117
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 100 acatatatatgaatgtgggcaatgctagaaagtctta 136
|||| ||||||||||||||||||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtctta 26
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatg 62
|||||||||||| ||||||| ||||| |||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||| |||||| ||||| |||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtctta 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
||||||||| |||||||||||| || |||||||| |||||| || ||||||||| | |
Sbjct: 80 atatgtctatattcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattg 21
Query: 142 caaagcggaggaagta 157
||| |||||||||||
Sbjct: 20 taaaacggaggaagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||| |||||||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 46 cacatttatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtctta 105
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctt 135
|||||||||||||||||| | ||| ||||||||||||||||| |||||||||
Sbjct: 90 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctt 135
|||||||||||||||||||| | ||| ||||||||||||||||| |||| ||||
Sbjct: 54 atatgtctagattcattaacttctatgtgaatgtgggcaatgctggaaaatctt 1
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 106 atatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||| ||||||||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtctta 81
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 86 gtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaa 104
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 91 gattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttata 120
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 2 ttattactacctctatttcaggttataagactttctatcattgcctacatttatatagat 61
|||||||| |||| ||||||| |||||||||||||| || || | ||||| ||||||||
Sbjct: 143 ttattacttcctccgtttcaggctataagactttctagcactgtccacattcatatagat 84
Query: 62 g 62
|
Sbjct: 83 g 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 105 tatatgaatgtgggcaatgctagaaagtcttataa 139
||||||||| ||| || ||||||||||||||||||
Sbjct: 57 tatatgaatatggacagtgctagaaagtcttataa 23
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tttcaggttataagactttcta 38
||||||||||||||||||||||
Sbjct: 16 tttcaggttataagactttcta 37
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctt 135
|||| ||| ||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 82 atatgtgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtctt 27
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||||| ||| | | | ||||||| ||||||||||||
Sbjct: 81 atatatgtctagattcattaacatctatgggtacataggcaatgttagaaagtctta 137
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 83 tatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaa 109
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||| ||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 57 atatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttata 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 100 acatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||||||| |||||||||||||||||||||||||||
Sbjct: 62 acatatatatagatgtgggcaatgctagaaagtcttata 24
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 25 tataagactttctatcattgcctacatttatatagatg 62
|||||||||||||| ||||||| |||| ||||||||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatg 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 25 tataagactttctatcattgcctacatttatata 58
|||||||||||||| ||||||| |||| ||||||
Sbjct: 24 tataagactttctagcattgcccacatctatata 57
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 83 tatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct: 79 tatgtctagattcattaacatctatatgaatataggcaatgctagaa 33
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||| ||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 83 atatatctagattcattaacatccatatgaatgtgagcattgctagaa 130
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatgtgggtaatgcta 36
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgcta 126
||||||||||||||||| ||||||||||||| |||||||
Sbjct: 88 tctagattcattaacattaatatgaatgtgggaaatgcta 127
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||| ||||||||| ||||||||||||| ||||||||||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaa 101
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 121
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 108 atgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagta 157
|||||| ||||||||||||||||||||||||||| || |||||||||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||||| ||| ||||||||||||| |||| |||||||||||||||
Sbjct: 70 attcattagcatttatatgaatgtggacaatactagaaagtcttata 24
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 81 atatatgtctagattcattaacattaatatgaatgtgagaaatgctagaa 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 88 ctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaa 33
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||| |||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 82 atatatgcctagattcattagcatctatatgaatgtggacaatgctagaa 33
Score = 61.9 bits (31), Expect = 2e-09
Identities = 82/98 (83%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 34 ttctatcattgcctacatttatatagatggtagataatttaggcacatatat--gtctag 91
||||| ||||| | ||||| ||||||||| || ||| |||||| |||||| ||||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||| |||||||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaa 130
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtc 133
|||||||||||||||||| | ||| ||||||||||||||||| |||||||
Sbjct: 50 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtc 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaa 130
|||||||||||||||||||| | ||| ||||||||||||||||| ||||
Sbjct: 86 atatgtctagattcattaacttctatgtgaatgtgggcaatgctggaaa 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 106 atatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||| ||||||||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtctta 59
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 85 atatatgtctagattcattaacatcactatgaatgtgggaaatgctagaa 134
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtctta 26
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 106 atatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtctta 109
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| |||| |||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacattaatataaatgtgggaaatgctagaa 33
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||| ||||||||||||| ||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaa 120
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacatcactatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 81 atatatgtctagattcattaacattaatatgaatgtggagaatgctagaa 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||||||||| ||||||||||||| |||||||
Sbjct: 75 tctagattcattaacactaatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||| ||||| ||||||||||| | ||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaa 110
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||||||| || ||||||||||||| ||| |||||| ||||||
Sbjct: 81 atatatgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtctta 137
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||| ||| |||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 85 cacatctatatctaaattcattaacatctatatgtatgtgggcaatgctagaa 33
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| ||||||||| |||| ||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggtaatgctagaa 130
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 83 atatgtttagattcattaccatctatatgaatgtgggcaatgcta 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| |||||| || |||| || |||||||
Sbjct: 75 tctagattcattaacatctatatgcatatgggtaaggctagaa 33
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaa 33
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||| ||| |||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 78 cacatctatatctaaattcattaacatctatatatatgtgggcaatgctagaa 130
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtctta 93
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||| ||||||||||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttata 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 96 attaacatatatatgaatgtgggcaatgctagaa 129
|||||||| ||||||||||||| ||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataat 140
||||||||||||||||||||||| |||||||||||| |||| ||||| | |||||| |
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 141 acaaagcggaggaagta 157
| || |||||||||||
Sbjct: 123 atgaaacggaggaagta 139
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 82 atatgtttagattcattaacatcaatatgaatgtgggaaatgctagaa 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 88 ctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 78 acatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| |||| ||||||||||| | ||||||||||
Sbjct: 79 acatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaa 130
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 81 tatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||| ||||||||||||||| ||| | ||||||||||||||||||| |||||
Sbjct: 81 tatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatctta 26
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 108 atgaatgtgggcaatgctagaaagtcttata 138
||||||||| | |||||||||||||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttata 119
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||| ||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 114 gtgggcaatgctagaaagtcttataatacaaagcggaggaagta 157
|||||||||||||||||||||||||||| || |||||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 tactacctctatttcaggttataagactttcta 38
|||| ||||| ||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcaggttataagactttcta 37
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||||||||||| ||||||||||||| |||||||
Sbjct: 75 tctagattcattaacataaatatgaatgtgggaaatgcta 36
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||||||||||||||||| ||| |||| |||||| |||||||||| | ||||||
Sbjct: 81 atatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggcttata 139
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||| |||||||||||||| || ||||||||||||| |||||||||| | ||||||
Sbjct: 81 atatatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttata 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgg 117
||||||||||||||||| ||||||||||||
Sbjct: 75 tctagattcattaacattaatatgaatgtgg 45
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||||||||||||||||| ||| ||||||||||| | |||||||||| | ||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttata 106
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||| |||||||| |||||| || |||||||||| ||||||||||||||||||
Sbjct: 65 atatgtttagattcaataacatctaaatgaatgtgg-caatgctagaaagtctta 118
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 83 tatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||| ||||||||||| ||||||||||||| ||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaa 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| |||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 82 atatatgtcttgattcattaacatctacatgaatgtgggaaatgcta 36
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtg 116
||||||| ||||||||||||||| ||||||||||||
Sbjct: 79 atatatgcatagattcattaacatctatatgaatgtg 115
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||| | |||||||||||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaa 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||| ||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 80 atatatctagattcattaacatccatatgaatgtgagcattgctagaa 33
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
||||||| |||||||||||||| |||| || ||||| |||||||||| | |||||| |
Sbjct: 81 atatgtccagattcattaacatcaatataaacgtgggaaatgctagaatgacttatattg 140
Query: 142 caaagcggaggaagtattta 161
|| |||||||||||||||
Sbjct: 141 tgaaacggaggaagtattta 160
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
|||| |||||||||||||| || ||||||||||||| |||||||||| | |||| | ||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 142 caaagcggaggaagtattt 160
|| ||||||||||||||
Sbjct: 100 tgaaacggaggaagtattt 118
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 88 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||| ||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 82 atatatgtatagattcattaacatcaatatgaatatggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 72 atatatgtctagattcattaacatcaatatgaatatgggaaatgcta 118
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||||||||||||||||| ||| |||||||||| || |||||||||| | ||||||
Sbjct: 75 atatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttata 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||| ||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 80 atatatctagattcattagcatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtggg 118
||||||||||| |||||||||||| |||||||||||||
Sbjct: 81 atatatgtctacattcattaacatcaatatgaatgtggg 119
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgct 125
|||||||||||||||||||||||| |||||||| |||| ||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatatgggaaatgct 37
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| || ||||||||||||| |||| |||||
Sbjct: 82 atatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaa 33
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| ||||||||||||| | ||||||||||
Sbjct: 88 tctagattcattaactaatatatgaatgtgagaaatgctagaa 130
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| |||| | ||||||||||||| ||||||||||
Sbjct: 81 atatatgtctagattcactaacctccatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||||| |||| |||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattaacaccaatataaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgg 117
|||||||||||||||||||||||| ||||||||||||
Sbjct: 80 atatatgtctagattcattaacatcaatatgaatgtgg 117
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| |||||||||||||||| |||||||||||||| |||| |||||
Sbjct: 82 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaa 33
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 85 atgtctagattcattaacacctatatgaatgtggaaaatgctagaa 130
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| || ||||||||||||| |||| |||||
Sbjct: 82 atatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgct 125
|||||||||||||||||||||||| |||||||| |||| ||||||
Sbjct: 79 atatatgtctagattcattaacatcaatatgaatatgggaaatgct 124
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| | ||||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 81 atatatatttagattcatcaacatctatatgaatgtgggaaatgctagaa 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtg 116
|||||||||||||||||||| ||||||||||||
Sbjct: 78 atgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||||||||| |||||||| || | ||||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatatgagaaatgctagaa 33
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 48 atgtctagattcattaacacctatatgaatgtggaaaatgctagaa 3
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| |||||||||||||||| |||||||||||||| |||| |||||
Sbjct: 51 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaa 100
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||||| ||||||||||||| ||| ||||||
Sbjct: 81 atatatgtctagattcattaacaacaatatgaatgtgggaaatactagaa 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatggatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaa 111
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||| ||||||||||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttata 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 96 attaacatatatatgaatgtgggcaatgctagaa 129
|||||||| ||||||||||||| ||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgc 124
|||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 82 atatatgtctagattcattaacatcaatataaatgtgggaaatgc 38
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaa 33
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 118 gcaatgctagaaagtcttataatacaaagcggaggaagtat 158
||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 44 gcaatgctagaaagtcttatattataaaacggaggaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 103 tatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||| ||| ||||||||||||||||||||
Sbjct: 51 tatatatgaatatggacaatgctagaaagtcttata 86
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaa 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 78 atgtctagattcattgacatcaatatgaatgtgggaaatgatagaa 33
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 105 tatatgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagta 157
||||| ||||||| |||||||||||||||||||||| || |||||||||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 105 tatatgaatgtgggcaatgctagaaagtcttataata 141
||||||||||||| ||||||| ||||||||||||||
Sbjct: 57 tatatgaatgtggataatgctataaagtcttataata 21
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaaag 146
||||||||||||||||| |||||||| |||| |||||||||| | |||| | || ||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 147 cggaggaagtatt 159
|||||||||||||
Sbjct: 130 cggaggaagtatt 142
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaa 33
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||| ||| ||||||||||||| |||||||||| | ||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttata 113
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 86 gtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| ||| |||||||||||| ||||||||||
Sbjct: 76 gtctagattcattaatataagtatgaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||||||||||||| ||| ||||| ||||| | |||||||
Sbjct: 81 atatatgtctagattcattagcatcaatatggatgtgagaaatgcta 127
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatg 123
|||||||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 81 atatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacaacaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 105 tatatgaatgtgggcaatgctagaaagtctta 136
||||||||| ||||||||||||||||||||||
Sbjct: 57 tatatgaatatgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| ||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 105 tatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||| ||||||||||||||
Sbjct: 57 tatatgaatgtgggcaacgctagaaagtctta 26
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 105 tatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||||||||||||||| |||||
Sbjct: 68 tatatgaatgtgggcaatgctagaaactctta 99
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||| ||| ||||||||||||| |||||||||| | ||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttata 24
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 79 catatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||| ||||||||||||||||||| ||||||||||| | ||| |||||| | |||| |
Sbjct: 83 catatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttaca 24
Query: 139 atacaaagcggaggaagtat 158
|| || ||||||||||||
Sbjct: 23 ttatgaaacggaggaagtat 4
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||||||| ||||||||||||| |||| ||||| | ||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttata 116
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||||||||| ||||||||||| | |||||||||| | ||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttata 108
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 91 gattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||| ||||||||||||| ||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 91 gattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||| ||||||||||| | ||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaa 113
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| |||||||||| || ||||||||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaa 95
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
||||||||||| |||||||||||| |||||||||||| ||||| |||| | ||||||
Sbjct: 82 atatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttata 24
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 69 aatttaggcacatatatgtctagattcattaacatatatatgaatgtgggcaatgctaga 128
||||||| || |||||| ||||||||||||||||| |||||||||| |||||||||
Sbjct: 68 aatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgctaga 127
Query: 129 a 129
|
Sbjct: 128 a 128
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctag 127
|||||||||||||| |||| ||||||||||||| ||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatg 123
||||||||||||||| |||| ||||||||||||| ||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacgtcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 79 catatatgtctagattcattaacatatatatgaatgtgg 117
||||||| ||||||||||||||||| ||||||||||||
Sbjct: 52 catatatatctagattcattaacatcaatatgaatgtgg 90
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||| ||||||||| ||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||| ||||||||| ||||||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 79 catatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 52 catatatgtctagattcattagtactaatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||| ||||||||||||||| ||||||||||||| ||||||||| | ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttata 113
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/50 (90%), Gaps = 2/50 (4%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||||||||| ||||| |||||| ||||| ||||||||||||
Sbjct: 73 tctagattcattaacatctatat--atgtggacaatggtagaaagtctta 26
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||| |||||||||||||| || || || ||||||| |||||||| |||||||||
Sbjct: 81 atatatctagattcattaatatctaaataaatgtggacaatgctaaaaagtctta 135
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaa 108
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctaga 128
||||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 108 atgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagta 157
||||||||||||||||||| ||||||||| | || ||| |||| ||||||
Sbjct: 54 atgaatgtgggcaatgctaaaaagtcttacattataaaacggatgaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||| |||||||| || ||||||||| ||||| ||||||||||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttata 105
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||| || |||||||| ||| ||||||||||||| ||||||||||
Sbjct: 81 atatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaa 130
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| ||| |||||||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||| ||| |||||||||||| ||||||||||
Sbjct: 82 atatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgg 117
|||||||||||||||||||| ||| ||||||||||||
Sbjct: 81 atatatgtctagattcattagcatcaatatgaatgtgg 118
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 99 aacatatatatgaatgtgggcaatgctagaaagtctta 136
||||| ||||||||| || |||||||||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtctta 87
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| |||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatg 123
||||||||||||||||| ||||||||||||| ||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||| ||||||||| ||||||||||||| ||||||||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaa 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||| ||||||||| |||||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||| || ||||| ||||||||||||| ||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaa 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| ||||| ||||||||||||| ||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatg 123
||||||||||||||||| ||||||||||||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 93 ttcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||| ||||||||||||| ||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgc 124
|||||||||||||||||| ||||| |||| |||||||| |||||
Sbjct: 82 atatatgtctagattcataaacatcaatataaatgtgggaaatgc 38
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgcta 126
||||||||||||||||| |||| |||||||| |||||||
Sbjct: 88 tctagattcattaacatcaatataaatgtgggaaatgcta 127
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 86 gtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaa 117
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 90 agattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaa 33
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 96 attaacatatatatgaatgtgggcaatgctagaa 129
|||||||| ||||||||||||| ||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaa 109
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatg 123
|||||||||||| ||||||| ||| ||||||||||||| ||||
Sbjct: 48 atatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatg 123
||||||||||||||| |||| ||| ||||||||||||| ||||
Sbjct: 69 atatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 106 atatgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagtattta 161
||||||||||||| |||||||||| | |||||| | || |||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtattta 140
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 95 cattaacatatatatgaatgtgggcaatgctagaaagtct 134
||||| ||| ||||||||| ||||||||||| ||||||||
Sbjct: 96 cattagcatctatatgaatatgggcaatgcttgaaagtct 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 105 tatatgaatgtgggcaatgctagaaagtcttata 138
||||||||| || |||||||| ||||||||||||
Sbjct: 57 tatatgaatatgtgcaatgcttgaaagtcttata 24
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 106 atatgaatgtgggcaatgctagaaagtcttataatacaaagcggaggaagtattta 161
||||||||||||| |||||||||| | |||||| | || |||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtattta 140
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatacaaag 146
||||||||||||| ||| ||||||||||| | |||||||||| | |||| | | | ||
Sbjct: 75 tctagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaa 16
Query: 147 cggaggaagtat 158
||||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| ||||||||||||||||| |||| ||| |||| |||| |||||
Sbjct: 80 atatatatctagattcattaacattaatataaatatgggaaatgttagaa 129
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 91 gattcattaacatatatatgaatgtgggcaatgcta 126
||||||||||||| ||||||||||||| |||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgcta 103
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtg 116
||||||||||||||||||| |||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtg 106
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 tcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||| ||||||||||||| ||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 88 ctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||||| ||| ||||||||||||| |||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 91 gattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 91 gattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaa 110
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 90 agattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
|||||||||||||| || || ||||||| |||| |||||||| ||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagcctta 97
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||||||||||||||||| ||| |||||||| | | |||||||||| | ||||||
Sbjct: 81 atatatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgacttata 139
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||| | |||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatggtagaa 33
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 88 ctagattcattaacatatatatgaatgtgggcaatgcta 126
|||||||||||| ||| ||||||||||||| |||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgcta 112
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 91 gattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaa 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 91 gattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaa 84
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaat 122
||||| ||||||||||||||| || |||||| || ||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaat 40
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| |||||||| | || ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaa 33
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 106 atatgaatgtgggcaatgctagaaagtctta 136
||||||||||||| |||||||||| ||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgtctta 111
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgcta 126
||||||||||| |||||||| |||||||| |||| |||||||
Sbjct: 63 atgtctagatttattaacatcaatatgaatatgggaaatgcta 105
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||| || ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaa 106
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 tatatgtctagattcattaaca 102
||||||||||||||||||||||
Sbjct: 63 tatatgtctagattcattaaca 84
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||| |||||||||| || ||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaa 86
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 100 acatatatatgaatgtgggcaatgctagaa 129
||||||||||||||| ||| ||||||||||
Sbjct: 62 acatatatatgaatgcgggaaatgctagaa 33
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaat 113
|||||||||||||||||||| ||| ||||||||
Sbjct: 55 atatatgtctagattcattatcatcaatatgaat 88
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||| |||||||| |||||||| |||||||||||| ||| ||||||
Sbjct: 67 atatatatctagatttattaacatcactatgaatgtgggaaatactagaa 116
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 tctagattcattaacatatatatgaatgtg 116
||||||||||||||||| |||||||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtg 89
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtggg 118
||||||||||||||| |||||| |||||||
Sbjct: 30 tagattcattaacatctatatgtatgtggg 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 89 tagattcattaacatatatatgaatgtggg 118
||||||||||||||| |||||| |||||||
Sbjct: 34 tagattcattaacatctatatgtatgtggg 63
