miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 85.7 bits (43), Expect = 1e-16
Identities = 68/76 (89%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatatgctagaaa 75
||||||||| |||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgcccacgtt----tgctagaaa 32
Query: 76 gtcttataacctgaaa 91
||||||||||||||||
Sbjct: 31 gtcttataacctgaaa 16
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagca 51
|||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcaggttataagactttctagca 40
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatat 81
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattca 64
|||| |||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatat 56
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 27 tttcaggttataagactttctagcattgcccacattcatat 67
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123 tttcagattataagactttctagcattgcccacattcatat 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 66 atgctagaaagtcttataacctgaaatggtggtagta 102
||||||||||||||||||| ||||||||| |||||||
Sbjct: 98 atgctagaaagtcttataatctgaaatggaggtagta 134
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatat 107
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatat 56
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatat 81
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattca 64
|||| |||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatat 56
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatat 109
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatat 56
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatat 107
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 66 atgctagaaagtcttataacctgaaatggtggtagta 102
|||||||||||||||||||| ||||| || |||||||
Sbjct: 122 atgctagaaagtcttataacttgaaacggaggtagta 158
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatat 108
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| |||||||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatat 56
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 66 atgctagaaagtcttataacctgaaa 91
||||||||||||||||||| ||||||
Sbjct: 123 atgctagaaagtcttataatctgaaa 148
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatat 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcttattataagactttctagcattacccacattcatat 56
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 79.8 bits (40), Expect = 7e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatat 75
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
|||| |||| |||||| |||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacattcat 54
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||| |||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4 ttactccctccgtttcatattataagactttctagcattgcccacattcatat 56
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatatg 68
|||||||||| |||||| |||||||||||||||||||||||||| || |||||
Sbjct: 105 ttacttcctccgtttcatattataagactttctagcattgcccacgtttatatg 52
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 140 ttacttcctccgtttcaggctataagactttctagcactgtccacattcatat 88
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtccatattcatat 56
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 67 tgctagaaagtcttataacctgaaa 91
|||||||||||||||||||||||||
Sbjct: 40 tgctagaaagtcttataacctgaaa 16
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattg 54
||||||||| ||||| |||||||||||||||||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattg 90
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatat 56
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatat 77
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattg 54
||||||||| ||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattg 43
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatat 86
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattca 64
|||| |||| |||||| ||||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattca 53
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| ||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatat 56
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
||||||||| |||||| ||||||||||||||||||||||||| ||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattgcccatattcat 65
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 35 tataagactttctagcattgcccacattcatat 67
||||||||||||||| |||| ||||||||||||
Sbjct: 24 tataagactttctagtattgtccacattcatat 56
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||||||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 115 ttacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatat 63
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatat 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||| | |||||||||| ||||| |||||||||||||||||
Sbjct: 5 tacttcctccgttttatattataagactatctagtattgcccacattcatat 56
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatatg 68
||||||||||||||||||||||||||||||||
Sbjct: 105 taagactttctagcattgcccacattcatatg 74
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tagttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||| |||| |||||| | |||||||||||||||||||||||||||||||
Sbjct: 162 tagttactccctccgtttcataatgtaagactttctagcattgcccacattcatat 107
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||||||||||| | |||||||||||||| ||||||||||| ||||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatat 56
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| |||||||||||||||||||| |||| ||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatat 63
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
|||| |||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacattgcccacattcat 54
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 36 ataagactttctagcattgcccacattcatat 67
||||||||||||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatat 83
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 36 ataagactttctagcattgcccacattcatat 67
||||||||||||||||||| ||||||||||||
Sbjct: 1 ataagactttctagcattgtccacattcatat 32
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatat 56
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| |||||||||||||||||||| |||||||||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatat 81
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatat 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| || |||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 36 ataagactttctagcattgcccacattcatat 67
||||||||||||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatat 83
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 36 ataagactttctagcattgcccacattcatat 67
||||||||||||||||||||||| ||||||||
Sbjct: 1 ataagactttctagcattgcccatattcatat 32
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatatg 68
||||||||||||||||||||||||||||||||
Sbjct: 109 taagactttctagcattgcccacattcatatg 78
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacatt 62
||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacatt 51
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatat 107
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 36 ataagactttctagcattgcccacattcatat 67
||||||||||||||||||||||||||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatat 32
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 36 ataagactttctagcattgcccacattcatat 67
||||||||||||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatat 83
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||| ||||||||| |||||||||||
Sbjct: 137 taagactttttagcattgctcacattcatat 107
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 41 actttctagcattgcccacattcatat 67
||||| |||||||||||||||||||||
Sbjct: 117 actttttagcattgcccacattcatat 91
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||||||||||||||
Sbjct: 121 taagactttctagcattgcccacattcatat 91
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||||||||||||||
Sbjct: 5 taagactttctagcattgcccacattcatat 35
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||| ||||||||||||||||||
Sbjct: 116 taagactttctaacattgcccacattcatat 86
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||||||||||||||
Sbjct: 119 taagactttctagcattgcccacattcatat 89
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||| ||||||||||
Sbjct: 26 taagactttctagcattgcctacattcatat 56
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 40 gactttctagcattgcccacattcatatg 68
|||||||||||||||||||||||||||||
Sbjct: 1 gactttctagcattgcccacattcatatg 29
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 40 gactttctagcattgcccacattcatatg 68
||||||||| |||||||||||||||||||
Sbjct: 112 gactttctaacattgcccacattcatatg 84
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||||||||||| |||||||||||| |||||||| || ||||||||
Sbjct: 4 ttacttcctctgtttcatactataagactttcaagcattgcacatattcatat 56
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattca 64
||||||||| |||||| | ||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattca 53
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||||||||||||||| |||||||||
Sbjct: 137 taagactttctagcattgcccgcattcatat 107
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||||| |||||| |||||||||||||||||||| ||||||| ||||
Sbjct: 115 ttacttcctccgtttcatattataagactttctagcattatccacatttatat 63
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| |||| |||||| |||||||||||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttatagcattatccacattcatat 56
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | ||||||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatat 56
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcat 65
|||||||||||||||||||||| ||||||
Sbjct: 137 taagactttctagcattgcccaaattcat 109
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatat 56
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 35 tataagactttctagcattgcccacattcatat 67
||||||||||||||||||| |||| ||||||||
Sbjct: 121 tataagactttctagcattacccatattcatat 89
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||| ||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatat 56
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||| ||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatat 56
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatatg 68
|||||||||| |||||||||||||||||||||
Sbjct: 81 taagactttccagcattgcccacattcatatg 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 38 aagactttctagcattgcccacattca 64
||||||||| |||||||||||||||||
Sbjct: 141 aagactttccagcattgcccacattca 115
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||||||||||||||| ||||||||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatat 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||| | ||||||||
Sbjct: 26 taagactttctagcattgcctatattcatat 56
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||| ||||||||||| | |||||||||||||||||| ||||||||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatat 81
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||| ||||||||||||
Sbjct: 26 taagactttctagcattgtccacattcatat 56
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatat 56
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||| |||||||||||||||||||||
Sbjct: 137 taagactttttagcattgcccacattcatat 107
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatat 56
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||| |||||||||||||||||||||||||
Sbjct: 99 taagagtttctagcattgcccacattcatat 69
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatatg 68
|||||||||| |||||||||||||||||||||
Sbjct: 59 taagactttccagcattgcccacattcatatg 90
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa
Indica Group
Length = 141
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||||||||| ||||
Sbjct: 26 taagactttctagcattgcccacatttatat 56
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
||||| ||||||||||| | ||||||||||||||||| |||||||||||
Sbjct: 4 ttactccctctgtttcacaatgtaagactttctagcattacccacattcat 54
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||| ||||||||||||
Sbjct: 87 taagactttctagcattgtccacattcatat 57
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||| ||||||||||||
Sbjct: 119 taagactttctagcattgtccacattcatat 89
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 35 tataagactttctagcattgcccacat 61
|||||||||||||||||||||||||||
Sbjct: 24 tataagactttctagcattgcccacat 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 35 tataagactttctagcattgcccacat 61
|||||||||||||| ||||||||||||
Sbjct: 115 tataagactttctaacattgcccacat 89
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||||||| ||||||||
Sbjct: 26 taagactttctagcattgcccatattcatat 56
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
|||||||||| |||||| | ||||||||||||||||| |||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattacccacattcat 54
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||||||| |||||||||||||||||
Sbjct: 137 taagactttctagtattgcccacattcatat 107
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||| ||||||||||||||||||
Sbjct: 137 taagactttctaacattgcccacattcatat 107
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | ||||||||| ||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatat 56
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||||||||||||||||||| |||||
Sbjct: 126 taagactttctagcattgcccacatacatat 96
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattca 64
||||||||| |||||| | ||||||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattca 53
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
|||||||||| |||||| | |||||||||||||||||||||| ||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattgcccatattcat 54
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||||| ||||||||||||
Sbjct: 26 taagactttctagcattgtccacattcatat 56
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 35 tataagactttctagcattgcccacattca 64
||||||||||||||||||||||||| ||||
Sbjct: 139 tataagactttctagcattgcccacgttca 110
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||||| |||||| | ||||||||||||||||||| ||||| |||||
Sbjct: 159 ttacttcctccgtttcacaatgtaagactttctagcattgctcacatacatat 107
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 35 tataagactttctagcattgcccacattcatat 67
||||||||||||||| |||||||| ||||||||
Sbjct: 24 tataagactttctagtattgcccatattcatat 56
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa
Japonica Group
Length = 128
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcat 65
||||||||| |||||||||||||||||||
Sbjct: 26 taagactttttagcattgcccacattcat 54
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 35 tataagactttctagcattgcccacattcatat 67
||||||||||||||||||| ||||||| |||||
Sbjct: 117 tataagactttctagcattacccacatacatat 85
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 35 tataagactttctagcattgcccacattcatat 67
||||||||||||||||||| ||||||| |||||
Sbjct: 24 tataagactttctagcattacccacatacatat 56
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 35 tataagactttctagcattgcccacattcatat 67
|||||||||||||||||||| ||| ||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatat 54
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 35 tataagactttctagcattgcccacattcatat 67
||||||||||||||| |||||||| ||||||||
Sbjct: 139 tataagactttctagtattgcccatattcatat 107
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacat 61
|||||||||||||||||||||||||
Sbjct: 137 taagactttctagcattgcccacat 113
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 35 tataagactttctagcattgcccacattcatat 67
|||||| | ||||||||||||||||||||||||
Sbjct: 24 tataagtcattctagcattgcccacattcatat 56
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
|||||||||| |||||| | |||| |||||||| |||||||||||||||||
Sbjct: 4 ttacttcctccgtttcataatgtaagtctttctagtattgcccacattcatat 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||||||||||||| || ||||||||
Sbjct: 137 taagactttctagcattgctcatattcatat 107
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 12 tagttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||||||| |||||| |||||| | |||||||||| | |||||||||||
Sbjct: 139 tagttacttcctccgtttcacaatataagtcattctagcatttctcacattcatat 84
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| |||||| | |||||||||| |||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| |||||| | |||||||||| |||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 68
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||||||||||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatat 56
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| |||||| | |||||||||| |||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 59/70 (84%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 15 ttacttcctctgtttcaggttataagactttctagcattgcccacattcat---atgcta 71
||||||||| ||||||| | |||||||||||||||||| ||| |||| | ||||||
Sbjct: 4 ttacttcctatgtttcataatgtaagactttctagcattgtccatattcgttcaatgcta 63
Query: 72 gaaagtctta 81
||||||||||
Sbjct: 64 gaaagtctta 73
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| | |||||| |||||||||| |||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatat 81
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 38 aagactttctagcattgcccacattcat 65
|||||||||||||||| |||||||||||
Sbjct: 27 aagactttctagcattacccacattcat 54
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||| |||||| |||||| | |||||||||| |||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 63
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcata 66
|||||||||||||||| |||||| | |||||||||| |||||||||||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcata 55
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||||||| |||||||| ||||||||
Sbjct: 137 taagactttctagtattgcccatattcatat 107
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 35 tataagactttctagcattgcccacattcat 65
||||||||||||||||||| | |||||||||
Sbjct: 119 tataagactttctagcattactcacattcat 89
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||| |||||||||| |||||||||||
Sbjct: 26 taagacttcctagcattgctcacattcatat 56
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 taagactttctagcattgcccacattcatat 67
||||||||||||||||||| || ||||||||
Sbjct: 87 taagactttctagcattgctcatattcatat 57
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 taagactttctagcattgcccacattcatat 67
|||||||||||||||| |||||||||||||
Sbjct: 2 taagactttctagcatcacccacattcatat 32
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
||||||||| |||||| | |||||||||||||||||| ||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcattg-ccacattcat 91
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
||||||||| |||||| | ||||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcat 54
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
||||||||| |||||| | ||||||||| |||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcat 109
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 46 ctagcattgcccacattcatat 67
||||||||||||||||||||||
Sbjct: 90 ctagcattgcccacattcatat 69
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 14 gttacttcctctgtttcaggttataagactttctagcattgcccacattcatat 67
||||||||||| |||||| |||||| | |||||| ||| |||||||||||||
Sbjct: 3 gttacttcctccgtttcacaatataagtcattctagtatttcccacattcatat 56
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 16 tacttcctctgtttcaggttataagactttctagcattgcccacattcat 65
||||||||| |||||| | ||||||||| |||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcat 54
