miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 210 bits (106), Expect = 5e-54
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||||||||| ||||| |||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtta 99
Query: 70 atgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaatg 129
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgaatcttggcacatatatatgtctagatttattaacatatatatgaatgtgggcaatg 39
Query: 130 ctagaaagtcttataatatgaaatagaggaagta 163
| |||||||||||||| ||||| |||||||||
Sbjct: 38 ccagaaagtcttataacttgaaacggaggaagta 5
Score = 157 bits (79), Expect = 6e-38
Identities = 139/159 (87%)
Strand = Plus / Plus
Query: 9 atactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtt 68
||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||| |||||
Sbjct: 4 atacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtt 63
Query: 69 aatgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaat 128
||| ||||||| | |||||| || | ||||| |||||||||||||||||||||||||||
Sbjct: 64 aataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaat 123
Query: 129 gctagaaagtcttataatatgaaatagaggaagtagcat 167
||||||||||||||||| ||||| |||| ||||||||
Sbjct: 124 gctagaaagtcttataacttgaaacggaggtagtagcat 162
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 143/159 (89%)
Strand = Plus / Plus
Query: 9 atactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtt 68
||||| ||||| ||||| ||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtt 63
Query: 69 aatgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaat 128
|||||| ||| ||||||||||||||||||| |||| ||| ||||||||||||||||||
Sbjct: 64 aatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaat 123
Query: 129 gctagaaagtcttataatatgaaatagaggaagtagcat 167
|||||||||||||||||||||||| |||||||||||||
Sbjct: 124 gctagaaagtcttataatatgaaacggaggaagtagcat 162
Score = 157 bits (79), Expect = 6e-38
Identities = 127/143 (88%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 70 atgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaatg 129
|||||||||| | |||||| ||| ||| || |||||||| ||||||| |||||||||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 130 ctagaaagtcttataatatgaaa 152
|||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 186 bits (94), Expect = 7e-47
Identities = 109/114 (95%)
Strand = Plus / Minus
Query: 30 ataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatat 89
||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atatctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
Score = 155 bits (78), Expect = 2e-37
Identities = 105/114 (92%)
Strand = Plus / Plus
Query: 30 ataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatat 89
||||||||||||| ||||| ||||||||||||| |||||||||||||||| || ||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
|| ||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||| |||||||| ||||||||||||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 70 atgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaatg 129
||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatg 39
Query: 130 ctagaaagtcttataatatgaaatagaggaagta 163
|||||||||||||||||||||| |||||||||
Sbjct: 38 ttagaaagtcttataatatgaaacggaggaagta 5
Score = 133 bits (67), Expect = 9e-31
Identities = 124/143 (86%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||||||||| ||||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 70 atgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaatg 129
|||||||||| | |||||| ||| |||||| ||| |||| |||||||| ||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 130 ctagaaagtcttataatatgaaa 152
|||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaa 147
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 170 bits (86), Expect = 4e-42
Identities = 107/114 (93%)
Strand = Plus / Minus
Query: 30 ataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatat 89
||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatac 55
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
Score = 139 bits (70), Expect = 1e-32
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 30 ataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatat 89
||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||| |
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgt 60
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
|| ||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 167 bits (84), Expect = 6e-41
Identities = 130/144 (90%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 70 atgaatctaggtacatatatatgtctagattta-ttaacatatatatgaatgtgggcaat 128
|||||||||| || || || |||||||||| | ||||||| |||||||||||||| |||
Sbjct: 99 atgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaat 40
Query: 129 gctagaaagtcttataatatgaaa 152
||||||||||||||||||||||||
Sbjct: 39 gctagaaagtcttataatatgaaa 16
Score = 151 bits (76), Expect = 4e-36
Identities = 131/148 (88%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 6 tttatactacctccatttcaggttataagactttctaacattgtccacattcatatagat 65
|||||||| ||||| ||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 1 tttatactccctccgtttcatattataagactttctagcattacccacattcatatagat 60
Query: 66 gttaa-tgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtggg 124
||||| | ||||||| || || |||| |||||||| |||||||| ||||||||||||||
Sbjct: 61 gttaaattaatctagacacctacatatatctagattcattaacatctatatgaatgtggg 120
Query: 125 caatgctagaaagtcttataatatgaaa 152
|||||||||||||||||||||| |||||
Sbjct: 121 caatgctagaaagtcttataatctgaaa 148
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 165 bits (83), Expect = 2e-40
Identities = 140/158 (88%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 162 tatactccctccgtttcatattataagactttctagcattgcccacattcatatagatgt 103
Query: 68 taatgaatctaggtacata--tatatgtctagatttattaacatatatatgaatgtgggc 125
||||||||||| ||| | ||||| | |||||| |||||||| |||||||||||||||
Sbjct: 102 taatgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggc 43
Query: 126 aatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||||||||||||| |||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaacggaggaagta 5
Score = 159 bits (80), Expect = 2e-38
Identities = 131/147 (89%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 3 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62
Query: 68 taatgaatctaggtacata--tatatgtctagatttattaacatatatatgaatgtgggc 125
||||||||||| || ||| | | ||| |||||| |||||||| |||||||||||||||
Sbjct: 63 taatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggc 122
Query: 126 aatgctagaaagtcttataatatgaaa 152
|||||||||||||||||||||||||||
Sbjct: 123 aatgctagaaagtcttataatatgaaa 149
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 163 bits (82), Expect = 1e-39
Identities = 106/114 (92%)
Strand = Plus / Minus
Query: 30 ataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatat 89
||||||||||||| ||||| ||||||||||||||||||||||||||||||| | |||| |
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgt 55
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
||| ||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 54 atgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
Score = 147 bits (74), Expect = 6e-35
Identities = 104/114 (91%)
Strand = Plus / Plus
Query: 30 ataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatat 89
||||||||||||| ||||| ||| ||||||||| ||||||||||||||||| | | ||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
||| ||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 atgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 119/133 (89%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 137 taagactttttagcattgctcacattcatatagatgttaatgaatctagacacacatata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
| |||||||| |||||||| |||||||||||||||||||||||||||||||| | |||||
Sbjct: 77 tttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 109/122 (89%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| |||||||||||||||||||||||||||||| | |||| |
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| |||||||||||| ||||||||| ||||||||| | |||||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatga 145
Query: 151 aa 152
||
Sbjct: 146 aa 147
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 119/133 (89%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 137 taagactttctagcattgctcatattcatatagatgttaatgaatctagacacatatata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| |||||||||||||||||| |||||||| |||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacattatga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 131 bits (66), Expect = 3e-30
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||| ||||||| |||| |||||||||||||||||||||||||||||| | ||||||
Sbjct: 26 taagtctttctagtattgcccacattcatatagatgttaatgaatctagacatatatatg 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| ||||||||| || ||||||||||||||||||| | |||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatga 145
Query: 151 aa 152
||
Sbjct: 146 aa 147
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 119/134 (88%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| || |||||||||||||||||||||||||| ||| |||||
Sbjct: 137 taagactttctagcattgcccgcattcatatagatgttaatgaatctatatacttatatg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||| ||| ||| |||||||||||||||||||||||||||| | |||||
Sbjct: 77 tgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 151 aatagaggaagtag 164
|| ||||||||||
Sbjct: 17 aacggaggaagtag 4
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| ||||||||| ||||||| |||||||||||| |||||||
Sbjct: 26 taagactttctagcattgcccacattcacatagatgctaatgaatctagacacatataag 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
| | |||||| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 86 tatatagattcattaacatctatatgaatgcgggcaatgctagaaagtctta 137
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 118/133 (88%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| ||||||||||||| ||| ||||||||||||| ||| |||||
Sbjct: 137 taagactttctagcattgcccacattcatatatatgctaatgaatctaggcacacatata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||| || ||||| ||||||||||| |||||||||||||| | |||||
Sbjct: 77 tgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacattatga 18
Query: 151 aatagaggaagta 163
|| ||||||||||
Sbjct: 17 aacagaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 106/122 (86%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| | ||| ||||||| |||||||| |||||||||||| | |||| |
Sbjct: 26 taagactttctagcgttgcccacatttatatagatactaatgaatctagacatatatgtg 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|| ||||||| |||| |||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 86 tgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatga 145
Query: 151 aa 152
||
Sbjct: 146 aa 147
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 118/133 (88%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 137 taagactttctaggtttgtccacattcatatagatgttaatgaatctaaacacacatata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| ||||||||||| | |||||||||||||||||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacattatga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 123 bits (62), Expect = 8e-28
Identities = 107/122 (87%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||||| |||||||||||||||||||||||||||| | |||| |
Sbjct: 26 taagactttctagcattgtctacattcatatagatgttaatgaatctagacatatatgtg 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||| |||||| |||||||| ||||||||||||| ||| ||||||||||||| | |||||
Sbjct: 86 tgtttagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatga 145
Query: 151 aa 152
||
Sbjct: 146 aa 147
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 103/113 (91%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 105
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
|||||||||||||||||||||||||||||||| | ||||||| |||||||||
Sbjct: 106 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
Score = 131 bits (66), Expect = 3e-30
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| |||||||||||||||||||||||||||||| | |||| |
Sbjct: 137 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| |||||||||||| | ||||||| ||||||||| | |||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatga 18
Query: 151 aa 152
||
Sbjct: 17 aa 16
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 101/112 (90%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| |||||||| ||||||||| |||||||||||||||||||| || |||| |
Sbjct: 137 taagactttttaacattgcccacattcacatagatgttaatgaatctagatatatatgtg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||| |||||||| |||||||||||| |||||||||| ||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtctta 26
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||| ||| ||||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 26 taagacttcctagcattgctcacattcatatagatgttaatgaatctagacacacatata 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
| |||||||| |||||||| ||| ||||||||||||||| || |||||||||
Sbjct: 86 tatctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtctta 137
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 9e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 6 tttatactacctccatttcaggttataagactttctaacattgtccacattcatatagat 65
|||||||| ||||| ||||| | ||||||||| || |||||||||||||||||||||
Sbjct: 162 tttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagat 103
Query: 66 gttaatgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggc 125
|||||||||||||| | || ||||| ||||| || |||||||| ||||||||| |||||
Sbjct: 102 gttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggc 43
Query: 126 aatgctagaaagtcttataatatgaaa 152
||| ||||||||||||||| |||||||
Sbjct: 42 aatactagaaagtcttatattatgaaa 16
Score = 123 bits (62), Expect = 8e-28
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||||||||||| |||| ||| ||||||||||||||||||||| |||| || ||| |
Sbjct: 24 tataagactttctagtattgcccatattcatatagatgttaatgaacctagatatataca 83
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||||| |||||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtctta 137
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 9e-31
Identities = 127/147 (86%)
Strand = Plus / Plus
Query: 6 tttatactacctccatttcaggttataagactttctaacattgtccacattcatatagat 65
|||||||| ||||| ||||| | ||||||||| || |||||||||||||||||||||
Sbjct: 1 tttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagat 60
Query: 66 gttaatgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggc 125
|||||||||||||| | || ||||| ||||| || |||||||| ||||||||| |||||
Sbjct: 61 gttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggc 120
Query: 126 aatgctagaaagtcttataatatgaaa 152
||| ||||||||||||||| |||||||
Sbjct: 121 aatactagaaagtcttatattatgaaa 147
Score = 123 bits (62), Expect = 8e-28
Identities = 101/114 (88%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||||||||||| |||| ||| ||||||||||||||||||||| |||| || ||| |
Sbjct: 139 tataagactttctagtattgcccatattcatatagatgttaatgaacctagatatataca 80
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||||| |||||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 79 tatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtctta 26
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 116/133 (87%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| || ||||| |||||||||||||||| | |||||||||| | |||| |
Sbjct: 137 taagactttttagcattgcccacattcatatagatatcaatgaatctaaacatatatgtg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aaccgaggaagta 5
Score = 123 bits (62), Expect = 8e-28
Identities = 107/122 (87%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| | ||| ||||||||||||| |||||||||||||||| ||| |||||
Sbjct: 26 taagactttctagccttgcccacattcatatatatgttaatgaatctagacacacatata 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||| |||||| ||| | || |||||||||||||||||||||| ||||||||| | |||||
Sbjct: 86 tgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattatga 145
Query: 151 aa 152
||
Sbjct: 146 aa 147
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 127 bits (64), Expect = 5e-29
Identities = 100/112 (89%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||||||||| ||||||||||||||||| ||||||||||| | |||| |
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|| ||||||| |||| |||| |||||||||||||||||||||||||||||||
Sbjct: 56 tgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 100/112 (89%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| |||||||||||| ||| ||||||||||||| ||| |||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||| ||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 65 tgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 127 bits (64), Expect = 5e-29
Identities = 100/112 (89%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatata 61
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||| ||| |||| |||||||||||| | ||||||||||||||||
Sbjct: 62 tgtctagattcatttacatctatatgaatgtgtgtgatgctagaaagtctta 113
Score = 111 bits (56), Expect = 3e-24
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||||||||| ||||||||||| | |||||| |||||||||| ||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 111 tatatgaatgtgggcaatgctagaaagtctta 142
|||||||||||||| ||||||||||||||||
Sbjct: 33 tatatgaatgtgggtgatgctagaaagtctta 2
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 117/134 (87%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| | | |||||||| |||||||||||||||||||| |||
Sbjct: 26 taagactttctagcattgcctatattcatattgatgttaatgaatctaggta--tatgcg 83
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| ||||||||||||| |||||||||||||||||| | |||||
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 151 aatagaggaagtag 164
|| ||||||||||
Sbjct: 144 aacggaggaagtag 157
Score = 109 bits (55), Expect = 1e-23
Identities = 106/122 (86%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||||||||||||||||| |||||||||||||||| ||| |||
Sbjct: 135 taagactttctagcattgtccacattcatataaatgttaatgaatctag--acacgcata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
| ||||||| |||||||| |||||||| | |||||||||||||||||||| | |||||
Sbjct: 77 tacctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatga 18
Query: 151 aa 152
||
Sbjct: 17 aa 16
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 123 bits (62), Expect = 8e-28
Identities = 107/121 (88%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 45 attgtccacattcatatagatgttaatgaatc--taggtacatatatatgtctagattta 102
|||| ||||||||||||||||||||||||||| || |||||| | ||| |||||| |
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 103 ttaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagt 162
||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 65 ttaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggagt 6
Query: 163 a 163
|
Sbjct: 5 a 5
Score = 101 bits (51), Expect = 3e-21
Identities = 117/138 (84%), Gaps = 7/138 (5%)
Strand = Plus / Plus
Query: 28 ttataagactttctaacattgtccacattcatatagatgttaatgaatc--taggtacat 85
||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||
Sbjct: 23 ttataagactttctagaattgcccacattcatatagatgttaatgaatctatacacacat 82
Query: 86 atatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataa 145
|| | ||| |||||| |||||||| |||||||||||||||||| |||||||||||
Sbjct: 83 atgtgtgtatagattcattaacatctatatgaatgtgggcaat-----taagtcttataa 137
Query: 146 tatgaaatagaggaagta 163
||||||| |||||||||
Sbjct: 138 tatgaaacggaggaagta 155
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 115/133 (86%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||||||| || |||||||||||||||||||||| || ||| | |
Sbjct: 137 taagactttctagcattgtccatatacatatagatgttaatgaatctaaatatatacaca 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| ||||||| || ||||||||||| ||||||||||||||||| | | |||
Sbjct: 77 tgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| |||| |||||||||| ||| ||||||||||||||| | | ||||
Sbjct: 26 taagactttctagcattacccacattcatttagttgttaatgaatctagacatgtgtata 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
| | |||||| |||||||| |||||| || ||| ||||||||||||||||||
Sbjct: 86 tatttagattcattaacatctatatgtatatggacaatgctagaaagtctta 137
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 115/133 (86%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||||||||| ||||||||||||||||| |||||||||||| | ||||
Sbjct: 137 taagactttctaacattgcccacattcatatagatgctaatgaatctagacattattata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
| | ||||||||||| ||| |||||||||||||| ||||||| ||||||||| | |||||
Sbjct: 77 tatatagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/112 (85%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| || |||| ||||||||||||||||| |||| |||||| || ||| |
Sbjct: 26 taagactttatagcattacccacattcatatagatgctaataaatctatatatataataa 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||| |||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 86 tgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtctta 137
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 115/133 (86%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| |||| |||| | ||||| |||||||||||||||| |||||| |||
Sbjct: 137 taagactttctagtattgcccacgtacatatggatgttaatgaatctaaatacatacata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| || |||||| |||||||||||||||||||||| | | |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| ||| |||||| ||||||||||||||||||| | || |||
Sbjct: 26 taagactttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
| | |||||| |||||||| ||||| | ||||||||| |||||||||||||
Sbjct: 86 tatttagattcattaacatccatatgtacgtgggcaatactagaaagtctta 137
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatga 122
Query: 151 aatagaggaagta 163
|| ||||||||||
Sbjct: 123 aacagaggaagta 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 105 aacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
|||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 63 aacatatatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagtag 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 28 ttataagactttctaacattgtccacattcatatagatgttaatgaatctag 79
||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 117 ttataagactttctagcattgtccacattcatatatatgttaatgaatctag 66
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 28 ttataagactttctaacattgtccacattcatatagatgtt 68
||||||||||||||| |||| ||||||||||||| |||||
Sbjct: 23 ttataagactttctagcattacccacattcatatatatgtt 63
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| |||||| |||||| ||||||||||||||| ||||| |||
Sbjct: 26 taagactttctagcattgcccacatacatataaatgttaatgaatctaaacacatacata 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||| |||| ||| || |||||| ||||||||||||||||||||||
Sbjct: 86 tgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtctta 137
Score = 115 bits (58), Expect = 2e-25
Identities = 115/134 (85%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| ||| |||||| |||||| |||||||||||| | || |||
Sbjct: 137 taagactttctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||| |||||| |||||||| |||||| ||||||||||||||||||||||||| | | |||
Sbjct: 77 tgtttagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtga 18
Query: 151 aatagaggaagtag 164
|| ||||||||||
Sbjct: 17 aacggaggaagtag 4
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 99/112 (88%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| | || ||| |||||||||||||||||||||| ||| || |||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||| |||||||| |||||||||||||||||| |||||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagtctta 137
Score = 103 bits (52), Expect = 8e-22
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| |||| |||||||||||||||||||||||||||||| | ||||
Sbjct: 137 taagactttctagtattgcccacattcatatagatgttaatgaatctagacatatatgcg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||| ||| |||||||| ||||||||| |||||| | |||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtctta 26
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 117 bits (59), Expect = 5e-26
Identities = 98/110 (89%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||| ||||||||||||||||||| |||||| | |||||||||| |||||||| |||
Sbjct: 112 attcatctagatgttaatgaatctag--acatatgtgtgtctagattcattaacatctat 55
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
|||||||||||||||||||||||| |||| | ||||||| |||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 106/122 (86%), Gaps = 2/122 (1%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||| ||||||| ||||| |||||||||||||||||||||||||||||| ||| | |||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctag--acacacata 83
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| || |||||| | ||||||||| ||||||||| | |||||
Sbjct: 84 tgtctagattcattaacatctagatgaatataagcaatgctacaaagtcttacattatga 143
Query: 151 aa 152
||
Sbjct: 144 aa 145
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 117 bits (59), Expect = 5e-26
Identities = 86/93 (92%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 41 taacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctagatt 100
|||||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||
Sbjct: 2 taacattgcccacattcatatatatgttaatgaatctag--acatatatat--ctagatt 57
Query: 101 tattaacatatatatgaatgtgggcaatgctag 133
||||||||||||||||||||||||||||||||
Sbjct: 58 cattaacatatatatgaatgtgggcaatgctag 90
Score = 113 bits (57), Expect = 8e-25
Identities = 79/86 (91%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 44 cattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttat 103
||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctag----atatatatgtctagattcat 31
Query: 104 taacatatatatgaatgtgggcaatg 129
||||||||||||||||||||||||||
Sbjct: 30 taacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| ||||||||||||||||||||||| ||||||||||||| | ||||||| ||||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| |||||||| |||||||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaa 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 130 ttctagcattttccacattcatattgatgttaatgaatctagacttatatatatgcctag 71
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| |||| ||| ||||||||||||| |||||||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaa 33
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 83 catatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 52 catatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtctta 111
Query: 143 taatatgaaa 152
|||| |||||
Sbjct: 112 taatttgaaa 121
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 106 acatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||
Sbjct: 62 acatatatatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 73/83 (87%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||| |||| ||||||||||||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 70 atgaatctaggtacatatatatg 92
|||||||||| |||||||||||
Sbjct: 72 atgaatctag--acatatatatg 52
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||| ||||| ||||| ||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatatatatgt 62
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatg 149
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 150 aaatagaggaagta 163
||| |||||||||
Sbjct: 113 aaacggaggaagta 126
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 128 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 69
Query: 68 taatgaatctag 79
||||||||||||
Sbjct: 68 taatgaatctag 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||||||||||||||| |||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaa 16
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 113 bits (57), Expect = 8e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 20 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatc 79
Query: 111 tatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaa 104
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| | |||||| | |||||||| ||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacat 33
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||| | ||||||||||
Sbjct: 32 caatatgaatgtgagaaatgctagaa 7
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 98/112 (87%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| | || ||| |||||||||||||||||||||| ||| || |||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||| |||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggcaatactagaaagtctta 137
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/112 (85%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| |||| ||| |||||||||||||||||||||||||| | ||||
Sbjct: 137 taagactttctagtattgcccatattcatatagatgttaatgaatctagacatatatgcg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||| ||| |||||||| ||||||||| |||||| | |||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtctta 26
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatg 149
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 19
Query: 150 aaa 152
|||
Sbjct: 18 aaa 16
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||| | ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 70 atgaatctag 79
||||||||||
Sbjct: 65 atgaatctag 74
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 125 caatgctagaaagtcttataatatgaaatagaggaagta 163
|||||||||||||||||||||||||||| |||||||||
Sbjct: 90 caatgctagaaagtcttataatatgaaaaggaggaagta 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtcca 52
|||| ||||| ||||| ||||||||||||||| |||||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattgtcca 86
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatg 149
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 114
Query: 150 aaa 152
|||
Sbjct: 115 aaa 117
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||| | ||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 70 atgaatctag 79
||||||||||
Sbjct: 68 atgaatctag 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 125 caatgctagaaagtcttataatatgaaatagaggaagta 163
|||||||||||||||||||||||||||| |||||||||
Sbjct: 43 caatgctagaaagtcttataatatgaaaaggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtcca 52
|||| ||||| ||||| ||||||||||||||| |||||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattgtcca 47
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 115/134 (85%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| |||||||||||| |||||||||||||||||||||| ||||| |||
Sbjct: 26 taagactttctaccattgtccacat--atatagatgttaatgaatctagaaacatacata 83
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
| |||||||| ||||| || || || ||||||| |||||||| ||||||||| | | |||
Sbjct: 84 tatctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtga 143
Query: 151 aatagaggaagtag 164
|| ||||||||||
Sbjct: 144 aacggaggaagtag 157
Score = 93.7 bits (47), Expect = 7e-19
Identities = 104/122 (85%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| || ||||||||||||| || ||||| ||||||||||||| || || |||
Sbjct: 135 taagactttttagcattgtccacatttatttagatattaatgaatctagatatatgtatg 76
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
| |||||||| |||||||| ||||| |||||| ||||| |||||||||||| | |||||
Sbjct: 75 tttctagattcattaacatctatat--atgtggacaatggtagaaagtcttacattatga 18
Query: 151 aa 152
||
Sbjct: 17 aa 16
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| || || |||||||| ||||||||||||| ||||| |||
Sbjct: 26 taagactttctagcattgctcatatacatatagacgttaatgaatctaaacacatacata 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| || |||||| |||||||||||| ||||||||| | | |||
Sbjct: 86 tgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtga 145
Query: 151 aatagaggaagtag 164
|| ||||||||||
Sbjct: 146 aacggaggaagtag 159
Score = 87.7 bits (44), Expect = 5e-17
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| || ||||| ||| |||||| ||||||||||||||||||| | || |||
Sbjct: 137 taagactttttagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
||| |||||| |||||| | |||||| || || |||||||||||||||||||
Sbjct: 77 tgtttagattcattaacgtctatatgtatatgagcaatgctagaaagtctta 26
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||||||| |||||||||||||| ||||||||||||||| || ||||| ||||||||
Sbjct: 33 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 92
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| ||||||| ||||||||||||| ||||||||||
Sbjct: 93 attcattaacacctatatgaatgtggaaaatgctagaa 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||||||||| ||||||||||||||| | ||||||| |||||
Sbjct: 130 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 71
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| ||||||| |||||||||||||| |||| |||||
Sbjct: 70 attcattaacacctatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 107 bits (54), Expect = 5e-23
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||||||| |||||||||||||| ||||||||||||||| || ||||| ||||||||
Sbjct: 100 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 41
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| ||||||| ||||||||||||| ||||||||||
Sbjct: 40 attcattaacacctatatgaatgtggaaaatgctagaa 3
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||||||||| ||||||||||||||| | ||||||| |||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| ||||||| |||||||||||||| |||| |||||
Sbjct: 63 attcattaacacctatatgaatgtgggaaatgttagaa 100
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||||||| ||||||||||||| ||| |||||||||||| || ||||||||||||||
Sbjct: 130 ttctaacattttccacattcatattgatattaatgaatctaaatagatatatatgtctag 71
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| |||||||| |||||||||||| ||||||||||
Sbjct: 70 attcattaacatcactatgaatgtgggaaatgctagaa 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||||||| ||||||||||||||||| | |||||| | | |||||| ||||| ||
Sbjct: 45 ccacattcatagtgatgttaatgaatctagacatatatatctatttagattcattaatat 104
Query: 110 atatatgaatgtgg 123
||||||||||||
Sbjct: 105 caatatgaatgtgg 118
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 53 cattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatata 112
||||||| |||||||||||||||||| | || ||||||||||||||||||||||| ||
Sbjct: 48 cattcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatcta 107
Query: 113 tatgaatgtgggcaatgctagaaagtctta 142
||| |||||||||||||||||||||||||
Sbjct: 108 aatgtatgtgggcaatgctagaaagtctta 137
Score = 81.8 bits (41), Expect = 3e-15
Identities = 110/133 (82%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| |||||| ||| ||||||||||| ||||||| | ||| |||
Sbjct: 137 taagactttctagcattgcccacatacatttagatgttaataaatctagacatatacata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||| |||||| |||||||| || ||||||| || ||| ||| ||||||||| | | |||
Sbjct: 77 tgtttagattcattaacatctaaatgaatggaggtaatactataaagtcttacattgtga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 107 bits (54), Expect = 5e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaacat 33
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 32 caatatgaatgtgggaaatgctagaa 7
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| | |||||| | | |||||| ||||||||
Sbjct: 19 ccacattcatattgatgttaatgaatctagacatatatatctatttagattcattaacat 78
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 79 caatatgaatgtgggaaatgctagaa 104
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaata 154
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 155 gaggaagta 163
|||||||||
Sbjct: 124 gaggaagta 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 28 ttataagactttctaacattgtccacattcatatagatgttaatgaatcta 78
||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 115 tgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattca 58
|||| ||||| ||||| ||||||||||||||| ||||| |||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 84 atatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
||||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 118
Query: 144 aatatgaaa 152
|||||||||
Sbjct: 119 aatatgaaa 127
Score = 87.7 bits (44), Expect = 5e-17
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 9 atactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtt 68
||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 139 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
Query: 69 aatgaatctaggtacatatatat 91
||||||||||| ||||||||||
Sbjct: 79 aatgaatctag--acatatatat 59
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaata 154
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 155 gaggaagta 163
|||||||||
Sbjct: 124 gaggaagta 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 28 ttataagactttctaacattgtccacattcatatagatgttaatgaatcta 78
||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 115 tgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattca 58
|||| ||||| ||||| ||||||||||||||| ||||| |||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataata 147
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 148 tgaaatagaggaagtag 164
||||| ||||||||||
Sbjct: 119 tgaaacggaggaagtag 135
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||| ||||| |||||||||||||||||||||| |||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaataaatctag 65
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||||||| |||||||||||||||||| |||||||||
Sbjct: 57 tatatgaatgtgaacaatgctagaaagtcttacaatatgaaa 16
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagat 65
|||| ||||| ||||| || |||||||||||| |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagat 60
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| || ||| ||||||||||||||||||||| ||||| || || ||
Sbjct: 26 taagactttctagcactgtttacattcatatagatgttaatggatctatacacttacatg 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| ||| |||| ||| |||| ||||||||||||||||||||||||| |||||
Sbjct: 86 tgtctagattcattgacatctatgtgaacgtgggcaatgctagaaagtcttatattatga 145
Query: 151 a 151
|
Sbjct: 146 a 146
Score = 87.7 bits (44), Expect = 5e-17
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||||||||||| ||||| |||| |||| |||||||| ||||||||||| |||| ||
Sbjct: 139 tataagactttctagcattgcccacgttcacatagatgtcaatgaatctagacacatgta 80
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatat 148
||| ||||| |||||||| ||||||||||| || ||||||||||||||| | |||
Sbjct: 79 agtgtatagatccattaacatctatatgaatgtaaacagtgctagaaagtcttacattat 20
Query: 149 gaaa 152
||||
Sbjct: 19 gaaa 16
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 103 bits (52), Expect = 8e-22
Identities = 98/112 (87%), Gaps = 6/112 (5%)
Strand = Plus / Minus
Query: 34 gactttctaacattgtccacattcatatagatgttaatgaatctaggtacat--at---- 87
||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatcc 53
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtc 139
|||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
Score = 89.7 bits (45), Expect = 1e-17
Identities = 95/112 (84%), Gaps = 6/112 (5%)
Strand = Plus / Plus
Query: 34 gactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata--- 90
||||||||| ||||| |||||||||||| ||||||||||||||||| || || |||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctagatatatggatatta 60
Query: 91 ---tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtc 139
|||||||||| |||||||| |||||||||||||||||| |||||||||
Sbjct: 61 atgtgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 100/116 (86%)
Strand = Plus / Plus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||| | ||||||| || ||||||||||||| |||||||||||||||| || |||||
Sbjct: 24 tataagtcattctaactttttccacattcatattaatgttaatgaatctagataaatata 83
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
||| |||||||| ||||| || ||||||||||||| |||||||||| | ||||||
Sbjct: 84 tatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttata 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||| | ||||| |||| |||||||||||| ||| ||||||||||||| || |||||
Sbjct: 139 tataagtcattctagcatttcccacattcatattgatattaatgaatctagatatatata 80
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatat 148
| | |||||||| |||||||| |||||||||||| || | ||||| | |||||| | |
Sbjct: 79 tttatctagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgt 20
Query: 149 gaaatagaggaagtag 164
|||| ||||||||||
Sbjct: 19 gaaacggaggaagtag 4
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 8e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 84 atatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
|||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 84 atatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttat 25
Query: 144 aatatgaaatagaggaagta 163
||||||||| |||||||||
Sbjct: 24 aatatgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 3 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62
Query: 68 taatgaatctagg 80
||| |||||||||
Sbjct: 63 taacgaatctagg 75
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 110 atatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||||||||||||||||||||||| |||||| |||| ||||
Sbjct: 81 atatatgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagta 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatata 62
||||||||||||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||||||||||||||||||||||| ||| || ||| |||| ||| |||||||| |||
Sbjct: 114 attcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatctat 55
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
||| |||||||||||||||||| | |||| | ||||||| ||||||||||
Sbjct: 54 atgtatgtgggcaatgctagaatgacttacattatgaaacggaggaagtag 4
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| ||||| |||||| ||||||||||||||||||| ||| || | || | |||||||
Sbjct: 33 ttctagcattgcccacatacatatagatgttaatgaatttagatatagatgtgtgtctag 92
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||| |||||||| ||||||||| |||| |||||||||| | |||| | |||||||
Sbjct: 93 attcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaa 147
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| || |||||||||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 33 ttctagcattttctacattcatattgatgttaatgaatgtag--acatatatatgtctag 90
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| |||||||| ||||||||||||| ||||||||||
Sbjct: 91 attcattaacatcaatatgaatgtgggaaatgctagaa 128
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||
Sbjct: 116 ccacattcatattgatgttaatgaatctag--acatatatatgtctacattcattaacat 59
Query: 110 atatatgaatgtgggcaatgctagaa 135
|||||||||| | ||||||||||
Sbjct: 58 caatatgaatgtagaaaatgctagaa 33
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 118 ccacattcatattaatgttaatgaatctagatagatatatatgtctagattcattaacat 59
Query: 110 atatatgaatgtgggcaatgcta 132
||||||||||||| |||||||
Sbjct: 58 caatatgaatgtgggtaatgcta 36
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| | |||||| | |||||||| ||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacat 104
Query: 110 atatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
||||||||||||| ||||||| || | |||||| | ||||| ||||||||||
Sbjct: 105 taatatgaatgtgggaaatgctaaaatgacttatattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 77 tgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatatga 18
Query: 151 aa 152
||
Sbjct: 17 aa 16
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 105 aacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 70 atgaatctag 79
|| |||||||
Sbjct: 65 ataaatctag 74
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 9 atactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtt 68
||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||| ||||||||||||||||| || || | |||||||||||| ||||||||
Sbjct: 117 cacattcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatc 58
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||| | ||||||||||||| | |||| | |||||||
Sbjct: 57 tatatgaatataggcaatgctagaatgacttacattatgaaa 16
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||||||||||||||||||||||| | | | |||| |||||||| |||||||| ||
Sbjct: 49 attcatatagatgttaatgaatctagacatagacatatatctagattcattaacatccat 108
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
||||||||| ||| |||||||| | |||| | ||||||| ||||||||||
Sbjct: 109 atgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 159
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 33 ttctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtctag 92
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| ||||||| ||||||||||||| ||| ||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaa 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| | ||||||||||||||| | |||||| | |||||||| ||||||||
Sbjct: 118 ccacattcatattgttgttaatgaatctagacatatatatctatctagattcattaacat 59
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||| |||||| ||||||||||
Sbjct: 58 caatatggatgtggaaaatgctagaa 33
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 87 tatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataat 146
|||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| | |
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 147 atgaaatagaggaagta 163
|||||| |||||||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 83 catatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||||||||||||||| |||||||| |||||||||||| |||||||||||| | ||||
Sbjct: 52 catatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgactta 111
Query: 143 taatatgaaatagaggaagta 163
| |||||||| |||||||||
Sbjct: 112 cattatgaaatggaggaagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||||||||| | |||| | ||||| ||||| |||||||||||||||||
Sbjct: 134 tatacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgt 75
Query: 68 taatgaatctaggtacatatatatg 92
|||||||||||| |||||||||||
Sbjct: 74 taatgaatctag--acatatatatg 52
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 83 catatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 52 catatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtctta 111
Query: 143 taatatgaaatagaggaagta 163
| ||||||| ||||| ||||
Sbjct: 112 cattatgaaacagagggagta 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 111 taagactttctagcattgtccacattcatatagatgttaatgaatctag 63
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 106 acatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
|||| ||||||||||||| |||||||||||||||||| | ||||||| |||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgt 67
|||||||||||| ||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||||| |||||||||||||| || |||||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcatatagatgtta 80
Query: 70 atgaatctaggta 82
||||||| |||||
Sbjct: 79 atgaatcaaggta 67
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatg 66
|||| ||||| |||||||||||||||||||||| || |||||| |||||||||||||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtccatattcatatagatg 61
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 97 gatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||| |||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttata 120
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||||||||| | | | | |||||||||||||||||||| | ||||||
Sbjct: 137 taagactttctaacattgcctatgtacccatagatgttaatgaatctagacatatatatg 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||| |||||| |||||||| || ||||||||||| |||||||||||||||| | |||||
Sbjct: 77 tgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatga 18
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 32 aagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatat 91
||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||
Sbjct: 27 aagactttctagcattacccacattcatttagatgttaatgaatctaaacacatatatat 86
Query: 92 gtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
||||||||| |||||||| ||| | | | ||||||| ||||||||||||
Sbjct: 87 gtctagattcattaacatctatgggtacataggcaatgttagaaagtctta 137
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 97.6 bits (49), Expect = 5e-20
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 45 attgtccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttatt 104
|||| |||||||| ||||||| |||||||||||| |||||||| ||| ||||| |||
Sbjct: 121 attgcccacattcttatagatactaatgaatctagccacatatat--gtccagattcatt 64
Query: 105 aacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||| ||||||||||||||||||||||||| | |||||| |||||||
Sbjct: 63 aacatctatatgaatgtgggcaatgctagaatgacttatattatgaaa 16
Score = 93.7 bits (47), Expect = 7e-19
Identities = 116/138 (84%), Gaps = 2/138 (1%)
Strand = Plus / Plus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||| | ||||| ||||| |||||||||||||||||||||||||||| | |||||||
Sbjct: 24 tataagtcattctagcattgcccacattcatatagatgttaatgaatct--ggacatata 81
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatat 148
| || ||||||| |||| || |||| ||||||||||||| |||||| | |||||| | |
Sbjct: 82 tgtggctagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgt 141
Query: 149 gaaatagaggaagtagca 166
|||| |||| |||||||
Sbjct: 142 gaaacggagggagtagca 159
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/112 (85%)
Strand = Plus / Plus
Query: 52 acattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatat 111
|||||||||||||||||||||||||||| ||| || ||| |||| ||| |||||||| |
Sbjct: 47 acattcatatagatgttaatgaatctagacacacatctatatctaaattcattaacatct 106
Query: 112 atatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
|||| |||||||||||||||||| | |||| | ||||||| |||||||||
Sbjct: 107 atatatatgtgggcaatgctagaatgacttacattatgaaacggaggaagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| ||||| |||||| |||||||||||||||||| ||| || | || | |||||||
Sbjct: 130 ttctagcattgcccacatatatatagatgttaatgaatttagatatagatgtgtgtctag 71
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||| |||||||| ||||||||||| || |||||||||| | |||| | |||||||
Sbjct: 70 attcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaa 16
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 93.7 bits (47), Expect = 7e-19
Identities = 74/82 (90%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
|||||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatg--catatatatgtcttgattcattaacatc 58
Query: 111 tatatgaatgtgggcaatgcta 132
|| ||||||||||| |||||||
Sbjct: 57 tacatgaatgtgggaaatgcta 36
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||| |||||||||||||||| || ||||||||||| |||||| ||||||||
Sbjct: 45 ccacattcatgtagatgttaatgaatcaag--acatatatatgcatagattcattaacat 102
Query: 110 atatatgaatgtg 122
||||||||||||
Sbjct: 103 ctatatgaatgtg 115
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||||||||||||||||||||||| || | | |||| |||||||| |||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagatatagacatatatctagattcattaacatccat 55
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
||||||||| ||| |||||||| | |||| | ||||||| ||||||||||
Sbjct: 54 atgaatgtgagcattgctagaatgacttacattatgaaacggaggaagtag 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||| ||||||||||||||||| || || | ||| |||||||| ||||||||
Sbjct: 46 cacattcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatc 105
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||| | ||||||||||||| | |||| | |||||||
Sbjct: 106 tatatgaatataggcaatgctagaatgacttacattatgaaa 147
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| || ||||||||||||| ||| ||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagatagatatatatgtctacattcattaacat 104
Query: 110 atatatgaatgtggg 124
|||||||||||||
Sbjct: 105 caatatgaatgtggg 119
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||| ||| | |||||| | |||||||| ||||||||
Sbjct: 118 ccacattcatattgatgttaatgaatgtagacatatatatctatctagattcattaacat 59
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||||||||| ||||||||||||| |||||||||||||||||| | |||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 153 tagaggaagta 163
| |||| ||||
Sbjct: 15 tggagggagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||||||||| | |||||||||||| ||||||||||||||||||||||||
Sbjct: 3 tatactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgt 62
Query: 68 taatgaatctag 79
|||| |||||||
Sbjct: 63 taataaatctag 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 123 ggcaatgctagaaagtcttataatatgaaa 152
|||||||||||||||||||| | |||||||
Sbjct: 84 ggcaatgctagaaagtcttacattatgaaa 113
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 91.7 bits (46), Expect = 3e-18
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| ||||| |||||| |||||| ||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctagc-acatacatatgtttagattcattaacat 103
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 104 caatatgaatgtgggaaatgctagaa 129
Score = 79.8 bits (40), Expect = 1e-14
Identities = 77/87 (88%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgt-ctagatttattaaca 108
|||||||||||| |||||||||||||||| |||||| ||||| ||||||| |||||||
Sbjct: 117 ccacattcatattgatgttaatgaatctaa--acatatgtatgtgctagattcattaaca 60
Query: 109 tatatatgaatgtgggcaatgctagaa 135
| ||||||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 91.7 bits (46), Expect = 3e-18
Identities = 91/106 (85%)
Strand = Plus / Minus
Query: 58 atatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatatatga 117
||||| ||||||||||||||| ||||| |||||| |||||| |||||||| || ||||
Sbjct: 110 atatatatgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatga 51
Query: 118 atgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||| ||||||||||||||||| | | ||||| ||||| ||||
Sbjct: 50 atgtgggtaatgctagaaagtcttacattgtgaaacagagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| |||| |||||||||| |||||||||||||||||| | || |||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatg 85
Query: 91 tgtctagatttattaac--atatatatgaatgtgggcaatgctagaaagtctta 142
||| |||||| |||||| ||||||||| ||||| ||||||||| |||||||||
Sbjct: 86 tgtttagattcattaacatatatatatgtatgtgagcaatgctaaaaagtctta 139
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||| ||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 44 ccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaacat 103
Query: 110 atatatgaatgtgg 123
||||||||||||
Sbjct: 104 caatatgaatgtgg 117
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||| ||| ||||||||||||| ||||||||||||||||| | |||||| | |||||
Sbjct: 129 ttctaatattttccacattcatattgatgttaatgaatctagacatatatatctatctag 70
Query: 98 atttattaacatatatatgaatgtggg 124
||| ||||| || |||||||||||||
Sbjct: 69 attcattaatatcaatatgaatgtggg 43
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||||| ||||||||||||||||| | ||||||||||||||||| |||||||| ||
Sbjct: 49 attcatatggatgttaatgaatctagttggatatatatgtctagattcattaacattaat 108
Query: 114 atgaatgtgggcaatgctagaa 135
||||||||| | ||||||||||
Sbjct: 109 atgaatgtgagaaatgctagaa 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||| |||||||||||||||| | |||||| ||||||| ||||||||
Sbjct: 117 cacattcatattaatgttaatgaatctagacatatatatccaactagattcattaacatc 58
Query: 111 tatatgaatgtgggcaatgctagaa 135
|||||||| |||| ||||||||||
Sbjct: 57 catatgaatatgggtaatgctagaa 33
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| || |||||||||| |||||| ||||||||
Sbjct: 118 ccacattcatattgatgttaatgaatctagataaatatatatgtatagattcattaacat 59
Query: 110 atatatgaatgtgggcaatgctagaa 135
|||||||| ||| ||||||||||
Sbjct: 58 caatatgaatatggaaaatgctagaa 33
Score = 85.7 bits (43), Expect = 2e-16
Identities = 106/127 (83%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| |||| |||||||| |||||||||||||||| | |||||| | |||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaatctatacatatatatttatctag 92
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagag 157
||| |||||||| ||||||||||||| |||||||||| | |||| | | ||||| |||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 158 gaagtag 164
|||||||
Sbjct: 153 gaagtag 159
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 45 ccacattcatattagtgttaatgaatctagatagatatatatgtctagattcattaacat 104
Query: 110 atatatgaatgtgggcaatgctagaa 135
|||||||||||| ||||||||||
Sbjct: 105 taatatgaatgtggagaatgctagaa 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||||||| |||||||||||||||| | |||||| | |||||
Sbjct: 130 ttctagcattctccacattcatattaatgttaatgaatctagacatatatatctatctag 71
Query: 98 atttattaacatatatatgaatgtgggcaatgcta 132
||| ||||||| ||||||||||||| |||||||
Sbjct: 70 attcattaacactaatatgaatgtgggaaatgcta 36
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| ||| |||| | |||||||| ||||||||||||||| ||| | || ||
Sbjct: 26 taagactttttaatattgcctacattcatttagatgttaatgaatatagacatatgtacg 85
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||| |||||| |||||||| |||||| ||||| ||||||||||||||||||| | | |||
Sbjct: 86 tgtttagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtga 145
Query: 151 aatagaggaagta 163
|| |||||||||
Sbjct: 146 aacggaggaagta 158
Score = 87.7 bits (44), Expect = 5e-17
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| ||||| |||||||||||||||||||||| || || |||
Sbjct: 137 taagactttctagcattgctcacatacatatagatgttaatgaatctaaacacgtacata 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
|||||| ||| |||||||| || |||||||| |||||| || |||||||||
Sbjct: 77 tgtctatattcattaacatctaaatgaatgtaggcaatattaaaaagtctta 26
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||| ||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 118 ccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaacat 59
Query: 110 atatatgaatgtgggcaatgc 130
|||| |||||||| |||||
Sbjct: 58 caatataaatgtgggaaatgc 38
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||| |||| ||||||||||||||||| | |||||| | |||||||| ||||| ||
Sbjct: 45 ccacatttatattgatgttaatgaatctagacatatatatctatctagattcattaatat 104
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 105 caatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 58 atatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatatatga 117
|||| ||||||||||||||||| || ||||||||||||||||| ||||| || ||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 118 atgtgggcaatgctagaaagtctta 142
||||||| ||| |||||| ||||||
Sbjct: 113 atgtgggaaatactagaatgtctta 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||| ||||||||||||| | |||||| | |||||||| ||||||||
Sbjct: 118 ccacattcatattgatattaatgaatctagacatatatatctatctagattcattaacat 59
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||| ||| ||||||||||||| || ||||||||||||||||| ||||| ||
Sbjct: 117 cacattcatattgattttaatgaatctagatagatatatatgtctagattcattaatatc 58
Query: 111 tatatgaatgtgggcaatgctagaa 135
||||||||||||| |||| |||||
Sbjct: 57 aatatgaatgtgggaaatgttagaa 33
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||||||| |||||||||||| ||| ||||||||||||| | |||||| | |||||
Sbjct: 33 ttctaacatttcccacattcatattgatattaatgaatctagacatatatatctatctag 92
Query: 98 atttattaacatatatatgaatgtg 122
||| ||||| || |||||||||||
Sbjct: 93 attcattaaaatcaatatgaatgtg 117
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 63 gatgttaatgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtg 122
||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||
Sbjct: 62 gatgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtg 121
Query: 123 ggcaatgctagaa 135
|| ||||||||||
Sbjct: 122 ggaaatgctagaa 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||||||| ||||||||||||||||| | |||||| | |||||||| ||||||||
Sbjct: 122 ccacattcatagtgatgttaatgaatctagacatatatatctatctagattcattaacat 63
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||||||||||||||||||||| | ||||||| | |||||| || |||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatc 105
Query: 111 tatatgaatgtgggcaatgctagaa 135
|||||||||||||| ||||||||||
Sbjct: 106 tatatgaatgtgggaaatgctagaa 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||||||||||||||| ||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 118 ccacattcatatagatgttgatgaatctaaatatatatagatgtctagattcattaacat 59
Query: 110 atatatgaatgtg 122
||||||||||||
Sbjct: 58 ctatatgaatgtg 46
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||| ||||| |||||| | ||||| |||| | |||||| |||| ||||
Sbjct: 160 tatactccctccgtttcacaatataagccattctagcatttttcacatttatattgatga 101
Query: 68 taatgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaa 127
|||||||||||| | |||||| | |||||||| ||||||||| ||||||||||||| ||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaa 41
Query: 128 tgctagaaagtcttataatatgaaatagaggaagtag 164
||||| || | |||||| | ||||| ||||||||||
Sbjct: 40 tgctacaatgacttatattgtgaaacggaggaagtag 4
Score = 77.8 bits (39), Expect = 4e-14
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| |||||||||||||||| || ||||||||||||||||| |||| |||
Sbjct: 45 ccacattcatatttatgttaatgaatctagatagatatatatgtctagattcattatcat 104
Query: 110 atatatgaatgtgggcaatgctagaaagtcttata 144
|||| |||||| |||||||||| | ||||||
Sbjct: 105 caatataaatgtgaaaaatgctagaatggcttata 139
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||| |||||||| ||||||||| || |||||||||||||| |||||| |||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 153 tagaggaagtag 164
|||||||||||
Sbjct: 15 cagaggaagtag 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||| |||| ||| ||||||||| |||| ||||||||||||||||||| |||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||| ||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 24 tataagtctttctagcattgctcatattcatatagatgttaatgaatctag 74
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 121 tataagactttctagcattacccatattcatatagatgctaatgaatctag 71
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| | ||||||||||||||| || ||||||||||||||||| |||| |||
Sbjct: 45 ccacattcatattgttgttaatgaatctagatagatatatatgtctagattcattaccat 104
Query: 110 atatatgaatgtgggcaatg 129
||||||||||||| ||||
Sbjct: 105 caatatgaatgtgggaaatg 124
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| |||| |||||||||||| | |||||| | |||||||| |||||||
Sbjct: 118 ccacattcatattgatggtaatgaatctagacatatatatctatctagattcattaacaa 59
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 57 catatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatatatg 116
||||||||||||||||||||||| || | | |||||| |||||| |||| ||| ||||||
Sbjct: 52 catatagatgttaatgaatctagatatagacatatgtttagattcattaccatctatatg 111
Query: 117 aatgtgggcaatgcta 132
||||||||||||||||
Sbjct: 112 aatgtgggcaatgcta 127
Score = 73.8 bits (37), Expect = 7e-13
Identities = 100/121 (82%)
Strand = Plus / Minus
Query: 44 cattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttat 103
||||| ||||||||||||||||| ||||||||||| | || | ||| |||||||| ||
Sbjct: 124 cattgcccacattcatatagatggtaatgaatctaaacatatgtctatatctagattcat 65
Query: 104 taacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
|||||| |||||| || |||| || ||||||| | |||| | ||||||| |||||||||
Sbjct: 64 taacatctatatgcatatgggtaaggctagaatgacttacattatgaaacggaggaagta 5
Query: 164 g 164
|
Sbjct: 4 g 4
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 44 cattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttat 103
|||| ||||||||||||| || ||||| ||| ||| || ||||||||||||||||| ||
Sbjct: 39 cattttccacattcatatttatattaataaatttagctaaatatatatgtctagattcat 98
Query: 104 taacatatatatgaatgtgggcaatgctagaa 135
|||||| ||||||||||||| ||||||||||
Sbjct: 99 taacatcaatatgaatgtgggaaatgctagaa 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| | |||||| | ||| ||||||||| ||
Sbjct: 118 ccacattcatattgatgttaatgaatctagacatatatatttagctaaatttattaatat 59
Query: 110 atatatgaatgtgggcaatgcta 132
| |||||||||||| |||||||
Sbjct: 58 aaatatgaatgtggaaaatgcta 36
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 119
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 119 taagactttctagcattgtccacattcatatagatgttaataaatctag 71
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 87.7 bits (44), Expect = 5e-17
Identities = 110/134 (82%), Gaps = 11/134 (8%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| ||||| |||||| |||||||||||||||||||||||
Sbjct: 126 taagactttctagcattgcccacatacatatagatgttaatgaatctag----------- 78
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| |||||||| || |||||||| ||||||||||||||||||| | | |||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 151 aatagaggaagtag 164
|| ||||||||||
Sbjct: 17 aacggaggaagtag 4
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 94 ctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||| |||||||| |||||| ||||||||||||||||||||||||| | |||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaa 136
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/107 (85%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||| | ||||| |||| | ||||||||||| ||| |||||||||||| || |||||
Sbjct: 139 tataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagatata 80
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||||||| ||||||| |||| |||||||| ||||||||||
Sbjct: 79 tatgtctagattcattaacaccaatataaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||| |||| | ||||||||||||||| | |||||| | | |||||| ||||| ||
Sbjct: 45 ccacatttatattggtgttaatgaatctagacatatatatctatttagattcattaatat 104
Query: 110 atatatgaatgtgggcaatgctagaaagtcttata 144
||||||||||| |||||||||| | ||||||
Sbjct: 105 caatatgaatgtgaaaaatgctagaatgacttata 139
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||| ||| |||||||| |||||||||||||||||||||||||||||||| | |||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 151 aa 152
||
Sbjct: 17 aa 16
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaat 75
|||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaat 70
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 106 acatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgt 67
|||||||||||| ||||| ||||||||||||||||||
Sbjct: 121 taagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 83.8 bits (42), Expect = 7e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 82 acatatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctt 141
||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||||
Sbjct: 86 acatatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtctt 27
Query: 142 ataatatgaaatagaggaagta 163
| | | ||||| |||||||||
Sbjct: 26 acattgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
|||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 26 taagactttctagcattatccacattcatttagatgttaatgaatctag--acatatata 83
Query: 91 tgt 93
|||
Sbjct: 84 tgt 86
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 83.8 bits (42), Expect = 7e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 120 gtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatata 62
|||| ||||| ||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 112/135 (82%), Gaps = 4/135 (2%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
||||||||||| || || | |||||| |||| ||||||||||||||||| |||||||
Sbjct: 135 tataagactttttagcactacccacatacataaagatgttaatgaatctaaatacatat- 77
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatat 148
||||||||| |||||||| || |||||||||||||| |||| ||||||||| | | |
Sbjct: 76 ---gtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgt 20
Query: 149 gaaatagaggaagta 163
|||| |||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 96/114 (84%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatatata 90
||||||||| || | ||| |||||||||| ||||||||||||||||||| |||||| ||
Sbjct: 26 taagactttgtagcgttgcccacattcatttagatgttaatgaatctag--acatatgta 83
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
| |||||| |||||||| | |||| ||||||| | ||||| |||||||||||
Sbjct: 84 --tttagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttata 135
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||| |||||||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 129
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatcta 78
|||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 119 taagactttctagcattgcccacattcatatagatgttaatgaatcta 72
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 102 attaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||| ||||||||||| |||||||||||||||||||| | |||||||
Sbjct: 66 attaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
|||||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||
Sbjct: 117 cacattcatatattagttaatgaatctagatagatatatatgtctagattcattaatatc 58
Query: 111 tatatgaatgtgggcaatgctagaa 135
||||||||||||| |||| |||||
Sbjct: 57 aatatgaatgtgggaaatgatagaa 33
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||| ||||||||||||| | |||||| | |||||||| ||||||
Sbjct: 45 ccacattcatattgatattaatgaatctagacatatatatctatctagattcattaacta 104
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| | ||||||||||
Sbjct: 105 atatatgaatgtgagaaatgctagaa 130
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 87 taagactttctagcattgtccacattcatatagatgttaacgaatctag 39
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| ||||||| ||||||||||||| |||||||||||||||||| | |||||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 151 aa 152
||
Sbjct: 96 aa 97
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 45 attgtccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttatt 104
||||| ||||| ||||| |||| |||||||||||| || ||||||||||||||||| |||
Sbjct: 123 attgttcacatccatattgatgctaatgaatctagatagatatatatgtctagattcatt 64
Query: 105 aacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||| |||||||||||| |||||||||| | |||| | |||||||
Sbjct: 63 ggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaa 16
Score = 50.1 bits (25), Expect = 1e-05
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||||||| |||| ||||||||||| | |||||| | |||||
Sbjct: 33 ttctagcattttccacattcatatcgatgccaatgaatctagacatatatatctatctag 92
Query: 98 atttattaacatatatatgaatgtg 122
||| |||| ||| ||||| |||||
Sbjct: 93 attcattagcatcaatatggatgtg 117
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaa 106
||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 46 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaa 101
Score = 52.0 bits (26), Expect = 3e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||| | ||| ||||||||||||| | |||||| | |||||||| |||||||| ||
Sbjct: 114 attcatgttgatattaatgaatctagacatatatatctatctagattcattaacatcaat 55
Query: 114 atgaatgtgggcaatgctagaa 135
||||||||| | |||| |||||
Sbjct: 54 atgaatgtgagaaatggtagaa 33
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtagc 165
|||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagtagc 116
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 102 attaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||| ||| ||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 66 attagcatttatatgaatgtggacaatactagaaagtcttatagtatgaaa 16
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaat 75
|||||||||||||| |||||||||||||||||| ||| ||||||||
Sbjct: 24 tataagactttctagtattgtccacattcatataaatgctaatgaat 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcat 59
|||| ||||| ||||| ||||||||||||||| ||||| ||| ||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattgcccatattcat 65
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||||||||||||||||| | |||||||| |||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||| |||||||| ||| |||||||||||||||||||||||||| | |||||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||| ||||| ||||||| ||| |||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacatttttatggatgttaatgaatctag 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatat 61
|||| ||||||||||| | |||||||||||| ||||| ||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaa 109
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 109 ttctagcattgtccacattcatatagatgttaataaatctag 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 115 tgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
||||||||||||||||||||| |||| | ||||||| ||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
||||||||||| |||| |||||||| || ||||||||||||||||| | |||| | ||
Sbjct: 49 attcatatagaggttagtgaatctatatagatatatatgtctagattcactaacctccat 108
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||| |||||||||| | |||| | |||||||
Sbjct: 109 atgaatgtgggaaatgctagaatgacttacattatgaaa 147
Score = 46.1 bits (23), Expect = 2e-04
Identities = 83/103 (80%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| || |||| ||||||||| | |||||| | | |||||| | |||| |
Sbjct: 118 ccacattcatatggaggttagtgaatctagacatatatatctatatagattcactaacct 59
Query: 110 atatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||| | || |||||||||| | |||| | |||||||
Sbjct: 58 ctatatgaatataggaaatgctagaatgacttacattatgaaa 16
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 102 attaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaag 161
|||| ||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||
Sbjct: 53 attatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggaggaag 112
Query: 162 tag 164
|||
Sbjct: 113 tag 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 114 atgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaa 16
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 9 atactacctccatttcaggttataagactttctaacattgtccacattcat 59
||||| ||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctaacattgcccacattcat 54
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatatagatgtta 69
|||| ||||| ||||| ||||||||||||||| |||| ||| ||||||||||||| ||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatatagatgata 55
Query: 70 atgaat 75
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||| ||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 33 ttctagcattttccacattcgtattgatgttaatgactctagatagatatatatgtctag 92
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
||| |||| ||| |||||||| | | |||||||||| | ||||||
Sbjct: 93 attcattagcatcaatatgaatatagaaaatgctagaatgacttata 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 87/107 (81%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||| | ||||| |||| || | |||||||| |||| |||||||||||| | |||||
Sbjct: 139 tataagtcattctagcattttctatattcatattgatgctaatgaatctagacatatata 80
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
| | |||||| | |||||||| ||| |||||||| ||||||||||
Sbjct: 79 tctatctagagtcattaacatcaatacgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgttaatgaatctaaacacatata 56
Query: 89 tat 91
|||
Sbjct: 55 tat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 106 acatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 62 acatatatatagatgtgggcaatgctagaaagtcttatattatgaaa 16
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 84 atatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
|||||| ||| |||||| |||||||| ||||| |||||||||||| |||||||||||||
Sbjct: 55 atatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttat 114
Query: 144 a 144
|
Sbjct: 115 a 115
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 40 ctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctagat 99
|||||||| |||||||||||| |||| |||| ||||||| |||||||||||||||| |
Sbjct: 116 ctaacatttcccacattcatattgatgctaataaatctag--acatatatatgtctagtt 59
Query: 100 ttattaacatatatatg 116
|||||| ||||||||||
Sbjct: 58 ttattagcatatatatg 42
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 82 acatatatatgtctagatttattaacatatatatgaatgtgggcaatg 129
|||||||||||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 65 acatatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 83 catatatatgtctagatttattaacatatatatgaatgtgggcaatg 129
||||||||||||||| || |||| ||| ||||||||||||| ||||
Sbjct: 51 catatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/53 (86%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 40 ctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatg 92
|||||||| |||||||||||| |||| ||||||| |||| |||||||||||
Sbjct: 1 ctaacatttcccacattcatattgatgctaatgaaactag--acatatatatg 51
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||||||| || | ||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 33 ttctaacattttctatattcatatagatgctaatgaatctatacgcatatatatgtttaa 92
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| |||| ||| ||||||||||||| ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaa 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaat 75
||||| |||| |||||||||||||||||| ||||||||
Sbjct: 130 ttctagcattttccacattcatatagatgctaatgaat 93
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/102 (84%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||| ||||| |||| |||||||||||| || ||||||||||||||||| ||| |||
Sbjct: 117 cacatccatatcgatgctaatgaatctagataaatatatatgtctagattcattggcatc 58
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||||||| |||||||||| | |||| | |||||||
Sbjct: 57 gatatgaatgtggaaaatgctagaatgacttacattatgaaa 16
Score = 50.1 bits (25), Expect = 1e-05
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||||||| |||| ||||||||||| | |||||| | |||||
Sbjct: 33 ttctagcattttccacattcatatcgatgccaatgaatctagacatatatatttatctag 92
Query: 98 atttattaacatatatatgaatgtg 122
||| |||| ||| ||||| |||||
Sbjct: 93 attcattagcatcgatatggatgtg 117
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 104/126 (82%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||||||| |||||||||||| |||| |||||||||||| | |||||| | |||||
Sbjct: 130 ttctaacatttaccacattcatattgatgctaatgaatctagacatatatatctatctag 71
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagag 157
||| |||| || ||||||||||| | |||||||||| | |||||| | ||||| |||
Sbjct: 70 attcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggag 11
Query: 158 gaagta 163
||||||
Sbjct: 10 gaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||| ||| |||||||||||| || ||||||||||||||||| |||| |||
Sbjct: 46 cacattcatattgatactaatgaatctagatagatatatatgtctagattcattagcatc 105
Query: 111 tatatgaatgtgg 123
||||||||||||
Sbjct: 106 aatatgaatgtgg 118
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 116 taagactttctagcattgtccatatttatatagatgttaatgaatctag 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatat 148
|||||||||||| |||||||| ||||| ||| ||| |||||||||||||||||| | |||
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 149 gaaa 152
||||
Sbjct: 123 gaaa 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 104 taacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||| ||||| |||||||||||||||||||||||||| | |||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaa 16
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgtta 69
|||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 26 taagactttctagcattgcccacatttatatagatgtta 64
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
|||||| |||| ||||||||| |||||| || ||||||||||||||||| ||||||||
Sbjct: 117 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 58
Query: 111 tatatgaatgtgggcaatgct 131
|||||||| |||| ||||||
Sbjct: 57 aatatgaatatgggaaatgct 37
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||||| ||||||||||||||||| | |||||| | | ||||||||||||||| ||
Sbjct: 49 attcatattgatgttaatgaatctagacatatatatctatatagatttattaacatcaat 108
Query: 114 atgaatgtg 122
|| ||||||
Sbjct: 109 ataaatgtg 117
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||||| |||||| |||||||| |||||| ||||||| |||||||||||||||||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata 117
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatcta 78
|||||||||||||| |||| |||||| ||||||||||||||||||||||
Sbjct: 117 tataagactttctagcattacccacatacatatagatgttaatgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||||| |||||| |||||||| |||||| ||||||| |||||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata 24
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatcta 78
|||||||||||||| |||| |||||| ||||||||||||||||||||||
Sbjct: 24 tataagactttctagcattacccacatacatatagatgttaatgaatcta 73
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
|||||| |||| ||||||||| |||||| || ||||||||||||||||| ||||||||
Sbjct: 44 cacatttatattgatgttaataaatctatatagatatatatgtctagattcattaacatc 103
Query: 111 tatatgaatgtgggcaatgct 131
|||||||| |||| ||||||
Sbjct: 104 aatatgaatatgggaaatgct 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||||| ||||||||||||||||| | |||||| | | ||||||||||||||| ||
Sbjct: 112 attcatattgatgttaatgaatctagacatatatatctatatagatttattaacatcaat 53
Query: 114 atgaatgtg 122
|| ||||||
Sbjct: 52 ataaatgtg 44
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||| |||| ||||||||||||||||| || | ||||||||||||||| || |||||
Sbjct: 118 ccacatttatattgatgttaatgaatctagatagaaatatatgtctagattcataaacat 59
Query: 110 atatatgaatgtgggcaatgc 130
|||| |||||||| |||||
Sbjct: 58 caatataaatgtgggaaatgc 38
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 120 gtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tttcaggttataagactttcta 42
||||||||||||||||||||||
Sbjct: 16 tttcaggttataagactttcta 37
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 86 atatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataa 145
|||||||||||||| |||||||| ||||||||||||| |||||||||| | |||| |
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 146 tatgaaatagaggaagtag 164
||||||| ||||||||||
Sbjct: 112 tatgaaacggaggaagtag 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/50 (88%), Gaps = 2/50 (4%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagat 99
|||||||||||| |||||||||| |||||| |||||||| | |||||||
Sbjct: 89 ccacattcatattgatgttaatggatctag--acatatatctatctagat 42
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 106 acatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||| ||| |||||||| |||||||||||||||||||||| ||||| ||| | |||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 151 aa 152
||
Sbjct: 130 aa 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgt 67
|||||||||||| ||||| ||||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgt 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 35 actttctaacattgtccacattcatatagatgttaatgaat 75
||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 117 actttttagcattgcccacattcatatagatgttaatgaat 77
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 104/126 (82%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| | |||||||||| |||||||||||||||| || ||||||||||||
Sbjct: 128 ttctagcatttttcacattcatactcatgttaatgaatctagata--tatatatgtctaa 71
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagag 157
||| |||||||| |||||||||||| ||||| |||| | |||||| | ||||| |||
Sbjct: 70 attcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaacggag 11
Query: 158 gaagta 163
||||||
Sbjct: 10 gaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 72/86 (83%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||||||| |||||||||||| ||| |||||||||| |||||||| ||||||||
Sbjct: 45 ccacattcatactcatgttaatgaatttag--acatatatatatctagattcattaacat 102
Query: 110 atatatgaatgtgggcaatgctagaa 135
|||||||||| ||||||||||
Sbjct: 103 gagtatgaatgtgaaaaatgctagaa 128
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| || |||||||||||||| || |||||||| |||||||| |||| |||
Sbjct: 45 ccacattcatattgacgttaatgaatctagatagatatatatttctagattcattaccat 104
Query: 110 atatatgaatgtggg 124
|||| ||||||||
Sbjct: 105 caatattaatgtggg 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||| |||| |||| |||||||||||| | |||||| | |||||||| |||||| |
Sbjct: 118 ccacattaatattgatggtaatgaatctagaaatatatatctatctagattcattaacgt 59
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 58 caatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 85 tatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatatat 113
|||||||| ||||||||||||||||| || ||||| ||||||| ||| |||||||| ||
Sbjct: 49 attcatattgatgttaatgaatctagatagatatagatgtctatattcattaacatcaat 108
Query: 114 atgaatg 120
|||||||
Sbjct: 109 atgaatg 115
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 53 cattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatata 112
||||||||| ||||||||||||| ||| | ||||| | |||||||| |||||||| |
Sbjct: 115 cattcatattgatgttaatgaatatagacatctatatctatctagattcattaacatcaa 56
Query: 113 tatgaatgtgggcaatgctagaa 135
||||||| | || ||||||||||
Sbjct: 55 tatgaatataggaaatgctagaa 33
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 85 tatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||||||||||| ||||| ||| ||||||||||||| ||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaa 107
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||| | |||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 120 tataagtcattctaacattttccacattcatattgatgttaatgaatctag 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 87 tatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataat 146
|||||||||||||| |||||||| |||||||||||| |||| ||||| | |||||| |
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 147 atgaaatagaggaagtag 164
|||||| ||||||||||
Sbjct: 123 atgaaacggaggaagtag 140
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 102 attaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaag 161
||||| || ||||||||||||||||| |||||||||||||| | | ||||| ||||||||
Sbjct: 53 attaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagaggaag 112
Query: 162 ta 163
||
Sbjct: 113 ta 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaat 75
|||||||||||| | ||| |||||||||||||||| |||||||||
Sbjct: 93 taagactttctagcgttgcccacattcatatagatattaatgaat 49
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||| ||||| |||| |||||||||||| | |||||| ||||||||| ||||| |||
Sbjct: 117 cacatccatattgatgctaatgaatctagacatatatatccgtctagattcattaatata 58
Query: 111 tatatgaatgtgggcaatgctagaa 135
|||||||||||| ||||||||||
Sbjct: 57 agtatgaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
||||||||||| || ||||||||||||| ||||||||||||||||| |||| |||
Sbjct: 45 ccacattcatacttatattaatgaatctagacggatatatatgtctagattcattagcat 104
Query: 110 atatatgaatgtgggcaatgcta 132
||||| ||||| | |||||||
Sbjct: 105 caatatggatgtgagaaatgcta 127
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 39 tctaacattgtccacattcatatagatgttaatgaatctag 79
||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctag 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 86 atatatgtctagatttattaacatatatatgaatgtgg 123
|||||| |||||||| |||||||| ||||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtgg 90
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 87 tatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 83 catatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||| | ||||||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 52 catatagacgtctagattcattaacatctatatgcatgtgggcaatgctagaa 104
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
||||| ||||| |||||| |||||||||||||||||||||||
Sbjct: 104 ttctagcattgcccacatgcatatagatgttaatgaatctag 63
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||| || |||||||| |||||||||||| ||||||| ||||||||||
Sbjct: 57 tatatgaatatgtgcaatgcttgaaagtcttatagtatgaaacagaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 102 attaacatatatatgaatgtgggcaatgctagaaagtct 140
|||| ||| ||||||||| ||||||||||| ||||||||
Sbjct: 95 attagcatctatatgaatatgggcaatgcttgaaagtct 57
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||| ||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 57 tatatgaatgtggataatgctataaagtcttataatatgaaa 16
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatataga 64
|||| ||||| ||||| |||||||||||| || |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttatagcattatccacattcatataga 59
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 10 tactacctccatttcaggttataagactttctaacattgtccacattcatata 62
|||| ||||| ||||| ||||||||||||||| |||| |||||||| |||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatata 62
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctt 141
||||||||||| |||||| | ||| ||||||||||||||||| |||||||||
Sbjct: 90 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctt 141
||||||||||||| |||||| | ||| ||||||||||||||||| |||| ||||
Sbjct: 54 atatgtctagattcattaacttctatgtgaatgtgggcaatgctggaaaatctt 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 32 aagactttctaacattgtccacattcatatagatgttaatgaatctag 79
||||||||| | ||||| ||||||||| ||||| ||||||||||||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatctag 94
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtctta 142
|||||||||||||||||||| ||||||||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtctta 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 cattgtccacattcatatagatgttaatgaatctag 79
||||| ||||||||| ||||| ||||||||||||||
Sbjct: 13 cattgcccacattcacatagaagttaatgaatctag 48
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 84 atatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttat 143
|||||||| ||||||||||||||||| |||||||||||| ||| |||||| | ||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 144 aatatgaaatagaggaagta 163
| ||||||| ||||| ||||
Sbjct: 125 attatgaaacagagggagta 144
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 73 aatctaggtacatatatatgtctagatttattaacatatatatgaatgtgggcaatgcta 132
||||||| || ||||||||||||||||| |||||||| |||||||| || | |||||||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 133 gaaagtcttataatatgaaa 152
||| | |||| | |||||||
Sbjct: 35 gaatgacttacattatgaaa 16
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 2/38 (5%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctaggtacatatatat 91
|||||||| ||||||||||||||||| ||||||||||
Sbjct: 49 attcatattgatgttaatgaatctag--acatatatat 84
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 8 tatactacctccatttcaggttataagactttctaacattgtccacattcatatagatgt 67
|||||| ||||| ||||| |||||| | |||||||||| |||||||||||| |||||
Sbjct: 137 tatactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgt 78
Query: 68 taatgaatctag 79
||||||||||||
Sbjct: 77 taatgaatctag 66
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||||||| |||||||| ||||||||||||| |||| ||||| | ||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttata 116
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 63.9 bits (32), Expect = 7e-10
Identities = 79/95 (83%), Gaps = 6/95 (6%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| |||| |||||||||||| ||||||||||||||| |||| |||
Sbjct: 45 ccacattcatattgatgctaatgaatctag------atatatgtctagattcattagcat 98
Query: 110 atatatgaatgtgggcaatgctagaaagtcttata 144
|||||||||| || |||||||||| | ||||||
Sbjct: 99 caatatgaatgtaggaaatgctagaatgacttata 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 71/84 (84%), Gaps = 6/84 (7%)
Strand = Plus / Minus
Query: 52 acattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacatat 111
|||||||||| |||| |||||||||||| ||||||| |||||||| |||| |||
Sbjct: 110 acattcatattgatgctaatgaatctag--acatata----tctagattcattagcatca 57
Query: 112 atatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 84 atatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
||||||||||||||||| |||||||| |||| |||||||| ||||||||||
Sbjct: 84 atatatatgtctagattcattaacattaatataaatgtgggaaatgctagaa 33
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 102 attaacatatatatgaatgtgggcaatgctagaa 135
|||||||| ||||||||||||| ||||||||||
Sbjct: 87 attaacatcaatatgaatgtgggaaatgctagaa 120
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtctta 142
|||||||||||||||||||||||||||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtctta 105
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 125 caatgctagaaagtcttataatatgaaatagaggaagta 163
|||||||||||||||||| | |||||||| |||||||||
Sbjct: 43 caatgctagaaagtcttacattatgaaatggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaat 75
|||||||||||| ||||| |||||||||||| ||| ||||||||
Sbjct: 105 taagactttctagcattgcccacattcatatggatactaatgaat 61
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatg 149
||||||||||| |||||||| ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 150 aaatagaggaagtag 164
||| ||||||||||
Sbjct: 18 aaacggaggaagtag 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 72/86 (83%), Gaps = 9/86 (10%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag--acat-------tctagattcattaacat 95
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| ||||||||||
Sbjct: 96 caatatgaatgtgggaaatgctagaa 121
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 94/114 (82%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||||||||||||||| | | ||||||| ||||| ||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag--ataggcatatgtccagattcattaacat 102
Query: 110 atatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
|||| || ||||| |||||||||| | |||||| | ||||| |||||||||
Sbjct: 103 caatataaacgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 88/107 (82%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctaggtacatata 88
|||||| | ||||| |||| |||| || |||| ||||||||||||||| | ||||||
Sbjct: 137 tataagtcattctagcatttcccacgtttatattgatgttaatgaatctgg--acatatg 80
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
| |||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 79 cctatctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 109 tatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||| ||| |||||||||||||||||||| ||||| | |||||||||
Sbjct: 51 tatatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatata 62
|||||||||||||| ||||||||| |||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatata 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 124 gcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||||||| ||| ||| |||||||||
Sbjct: 44 gcaatgctagaaagtcttatattataaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 63 gatgttaatgaatctaggtacatatatatgtctagatttattaacatatatatgaatgtg 122
||||||||||||||||| || |||| ||||||||||| |||||||| |||||||| ||
Sbjct: 51 gatgttaatgaatctagatagatat--atgtctagattcattaacatcaatatgaatatg 108
Query: 123 ggcaatgcta 132
|| |||||||
Sbjct: 109 ggaaatgcta 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/56 (89%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||| ||||||||||||||||| |||||||| | |||||||| ||||||||
Sbjct: 105 attcatattgatgttaatgaatctag--acatatatctatctagattcattaacat 52
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatcta 78
|||||| | ||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 121 tataagtcattctagcattttccacattcatattgatgttaatgaatcta 72
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||||| |||||| |||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttata 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 101 tattaacatatatatgaatgtgggcaatgctagaa 135
||||||||| ||||||||||||| ||||||||||
Sbjct: 67 tattaacattaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
||||| |||| ||||||||||||| ||||||||||| | ||| || ||| ||||||||||
Sbjct: 33 ttctagcattttccacattcatatcgatgttaatgagtttagatagatacatatgtctag 92
Query: 98 at 99
||
Sbjct: 93 at 94
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatcta 78
||||||||||||||| |||| ||||||||| ||||||||||| ||||||
Sbjct: 105 tataagactttctaatattgcacacattcatttagatgttaataaatcta 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
||||||||||||||| || ||||||||| ||||| ||||||||||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttata 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 114 atgaatgtgggcaatgctagaaagtctta 142
||||||||||||||||||| |||||||||
Sbjct: 54 atgaatgtgggcaatgctaaaaagtctta 26
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||| |||||||||||||||||||||| | |||||||
Sbjct: 57 tatatgaatatgggcaatgctagaaagtcttacattatgaaa 16
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatg 66
|||||||||||| ||||| ||| |||||||||||||
Sbjct: 26 taagactttctagcattgcccatattcatatagatg 61
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
||||||||||||| ||||| ||||||||||||| |||||||||| | |||| | | |||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 151 aatagaggaagtag 164
|| ||||||||||
Sbjct: 132 aacggaggaagtag 145
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 150
|||||||||| ||||||| ||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 151 aa 152
||
Sbjct: 17 aa 16
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||||| |||| ||| ||||||||||||||||| ||||||||
Sbjct: 26 taagactttctagcattaaccatattcatatagatgttaacgaatctag 74
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtc 139
||||||||||| |||||| | ||| ||||||||||||||||| |||||||
Sbjct: 50 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtc 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaa 136
||||||||||||| |||||| | ||| ||||||||||||||||| ||||
Sbjct: 86 atatgtctagattcattaacttctatgtgaatgtgggcaatgctggaaa 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 112 atatgaatgtgggcaatgctagaaagtctta 142
|||||||||||||||||||| ||||||||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtctta 59
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 34 gactttctaacattgtccacattcatatagatgttaatgaatctag 79
||||||| | ||||| ||||||||| ||||| ||||||||||||||
Sbjct: 1 gactttccagcattgcccacattcacatagaagttaatgaatctag 46
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 44 cattgtccacattcatatagatgttaatgaatctag 79
||||| ||||||||| ||||| ||||||||||||||
Sbjct: 127 cattgcccacattcacatagaagttaatgaatctag 92
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||| |||||||| |||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||||||| |||||||||||| |||||||||||||||||
Sbjct: 108 ttctaacatttcccacattcatattgatgttaatgaatctag 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||| |||||||| ||||||||||||| |||| |||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaa 108
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 87 tatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||||||||| ||| ||||| ||||||||||| | ||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaa 110
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 39 tctaacattgtccacattcatatagatgttaatgaatctag 79
||||||||| |||||||||||| |||||||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctag 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctaga 134
|||||||| |||||||| ||||||||||||| |||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatcta 78
||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgaatcta 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaata 154
|||||| |||||||| |||||||||||| |||||||||| | |||| | |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 155 gaggaagtagc 165
|||||||||||
Sbjct: 13 gaggaagtagc 3
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatcta 78
||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgaatcta 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaata 154
|||||| |||||||| |||||||||||| |||||||||| | |||| | |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 155 gaggaagtagc 165
|||||||||||
Sbjct: 13 gaggaagtagc 3
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 89 tatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
||||||||| || |||||||| ||||||||||||| ||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaa 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||||||||||| ||||
Sbjct: 106 ccacattcatattgatgttaatgaaactag 77
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaa 33
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatcta 78
|||||||||||||||||||||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatcta 78
|||||||||| |||||||||||| ||||||||||||||||
Sbjct: 33 ttctaacatttcccacattcatattgatgttaatgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||| |||||| |||||||| ||||||||||||| |||| |||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 111 tatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||||||| |||||||||||||| | | ||||| |||||||||
Sbjct: 57 tatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 111 tatatgaatgtgggcaatgctagaaagtctta 142
|||||||||||||||||||||||||| |||||
Sbjct: 68 tatatgaatgtgggcaatgctagaaactctta 99
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatg 66
|||||||||||| | ||| |||||||||||||||||
Sbjct: 26 taagactttctagcgttgcccacattcatatagatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatg 66
||||| |||||| ||||| |||||||||||||||||
Sbjct: 99 taagagtttctagcattgcccacattcatatagatg 64
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 90 atgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatg 149
|||| |||||| |||||||| ||||||||||||| ||||||||| | |||||| | ||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 150 aaatagaggaagtagca 166
||| ||||||||||||
Sbjct: 119 aaacggaggaagtagca 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatcta 78
|||||||||||| ||||||||||||||||
Sbjct: 92 ccacattcatattgatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 58.0 bits (29), Expect = 4e-08
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacata 110
||||||||||| |||| |||||||||||| || | |||||| |||||||| ||||||||
Sbjct: 46 cacattcatattgatggtaatgaatctagataga-atatatatctagattcattaacatt 104
Query: 111 tatatgaatgtgggcaatgctagaa 135
|||| ||| |||| |||| |||||
Sbjct: 105 aatataaatatgggaaatgttagaa 129
Score = 52.0 bits (26), Expect = 3e-06
Identities = 81/98 (82%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatgtctag 97
|||||||||| ||| ||| |||| |||||||||||||||| || |||| | | |||||
Sbjct: 129 ttctaacatttcccatatttatattaatgttaatgaatctagatatatat-tctatctag 71
Query: 98 atttattaacatatatatgaatgtgggcaatgctagaa 135
||| |||| ||| ||||||||||| | ||||||||||
Sbjct: 70 attcattaccatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||||| |||||| |||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttata 121
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatcta 78
|||||| | ||||| |||| |||||||||||| ||||||||||||||||
Sbjct: 121 tataagtcattctagcatttcccacattcatattgatgttaatgaatcta 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 101 tattaacatatatatgaatgtgggcaatgctagaa 135
||||||||| ||||||||||||| ||||||||||
Sbjct: 67 tattaacattaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataata 147
|||||| |||||| | |||||| || |||||||||| |||||||||||||||||| | |
Sbjct: 65 atatgtttagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattg 123
Query: 148 tgaaatagaggaagta 163
||||| |||||||||
Sbjct: 124 tgaaacggaggaagta 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatcta 78
|||||||||||| ||||| |||||||||| ||||||||| ||||||||
Sbjct: 118 taagactttctagcattg-ccacattcatttagatgttattgaatcta 72
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 87 tatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtctta 142
||||||| |||||| |||||||| ||| | ||||||||||||||||||| |||||
Sbjct: 81 tatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatctta 26
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 6 tttatactacctccatttcaggttataagactttctaacattgtccacattcatatagat 65
|||||||| ||||| ||||| | ||||| |||||| ||||| |||||| | ||||||
Sbjct: 1 tttatactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagat 60
Query: 66 gttaatgaatcta 78
|||||||||||||
Sbjct: 61 gttaatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 114 atgaatgtgggcaatgctagaaagtcttata 144
||||||||| | |||||||||||||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttata 119
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 58 atatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| |||||||| ||| |||||||||||||||| | ||||||
Sbjct: 53 atatagatgttagtgaatctaagtatgtatatatgtctagattcactaacat 104
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 88 atatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataata 147
|||| |||||||| ||||| || ||||||||||||| |||||||||| | |||| | ||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 148 tgaaatagaggaagta 163
||||| |||||||||
Sbjct: 100 tgaaacggaggaagta 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| ||| |||||||||||||
Sbjct: 75 ccacattcatattgatattaatgaatctag 46
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 84/103 (81%), Gaps = 6/103 (5%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||| ||||||||||| | || |||||||||| ||| ||||
Sbjct: 45 ccacattcatattgatgtcaatgaatctag------acatctgtctagattcattgacat 98
Query: 110 atatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
||||||||||||| |||||||||| | |||| | |||||||
Sbjct: 99 caatatgaatgtgggaaatgctagaatgacttacattatgaaa 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 70/86 (81%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||| ||||||||||| | | ||||||||||| ||| ||||
Sbjct: 112 ccacattcatattgatgtcaatgaatctag------acagatgtctagattcattgacat 59
Query: 110 atatatgaatgtgggcaatgctagaa 135
||||||||||||| |||| |||||
Sbjct: 58 caatatgaatgtgggaaatgatagaa 33
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 85 tatatatgtctagatttattaacatatatatgaatgtgggcaatgcta 132
|||| |||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgcta 105
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa
Indica Group
Length = 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 31 taagactttctaacattgtccacattcatatagatgtta 69
||||||||||||||| | ||||||||||| |||||||||
Sbjct: 26 taagactttctaacactttccacattcatctagatgtta 64
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 113 tatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||| |||||||||| | |||||| ||||||| ||||||||||
Sbjct: 55 tatgaatgtggaaaatgctagaatgacttatattatgaaacagaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 29 tataagactttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||| | ||||| |||| |||||||||||| |||| ||||||||||||
Sbjct: 24 tataagtcattctagcattttccacattcatactgatgctaatgaatctag 74
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 86 atatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
||||||||||||||| |||| ||| ||||||||||| | |||||||||| | ||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttata 106
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgttaatgaatct 77
|||| ||||||| |||||||||||| || |||||||||||||||||
Sbjct: 97 taaggctttctagtattgtccacatttatttagatgttaatgaatct 51
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 49 tccacattcatatagatgttaatgaatctaggtacatatatatgtctagat 99
||||||||||||| ||||||||||| | ||| || ||| ||||||||||||
Sbjct: 113 tccacattcatattgatgttaatgagtttagatagatacatatgtctagat 63
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 152
|||||||| |||||||| ||||||||||| | |||||||||| | |||||| | |||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 153 tagaggaagta 163
|||||||||
Sbjct: 117 cggaggaagta 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctag 79
||||||||||| |||||||||||||||||
Sbjct: 86 cacattcatattgatgttaatgaatctag 58
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
||||| |||| |||| |||||||| |||||||||||||||||
Sbjct: 117 ttctagcattttccatattcatattgatgttaatgaatctag 76
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 94 ctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaat 153
|||||||||||||||| |||| |||||| | |||||||||| | |||| | |||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 154 agaggaagt 162
||||||||
Sbjct: 14 ggaggaagt 6
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaat 75
|||||||||| |||| |||||||| |||||||||||||
Sbjct: 33 ttctaacattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctag 79
|||||||| |||||||||||||||||
Sbjct: 102 attcatattgatgttaatgaatctag 77
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
||||| |||| ||||||||||||| |||||||||| ||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgtatctag 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 102 attaacatatatatgaatgtgggcaatgctagaa 135
|||||||| ||||||||||||| ||||||||||
Sbjct: 85 attaacatcaatatgaatgtgggaaatgctagaa 118
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctaggtacatatatatgtctagatt 100
||||||||||| ||||| ||||||||||| | |||| ||||||||||||
Sbjct: 117 cacattcatattgatgtcaatgaatctagacatatatgtatgtctagatt 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 86 atatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
||||||||||||||| ||| |||| ||||||||||| | ||||||||||
Sbjct: 81 atatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaa 130
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||||||||||||||||
Sbjct: 106 ccacattcatattgatgttaatgaatctag 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctag 79
|||||||| |||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 86 atatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataa 145
|||| |||||||||| |||||||| ||||||||||| | ||| |||||| | |||| |
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 146 tatgaaatagaggaagta 163
||||||| |||||||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctag 79
||||||||||| |||||||||||||||||
Sbjct: 46 cacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 49 tccacattcatatagatgttaatgaatcta 78
||||||||||||| ||||||||||||||||
Sbjct: 91 tccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 105 aacatatatatgaatgtgggcaatgctagaaagtctta 142
||||| ||||||||| || |||||||||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtctta 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 31 taagactttctaacattgtccacattcatatagatgtt 68
|||||||||||| ||||| || |||||||||||||||
Sbjct: 87 taagactttctagcattgctcatattcatatagatgtt 50
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
||||| |||| | ||||||||||| |||||||||||||||||
Sbjct: 102 ttctatcatttttcacattcatattgatgttaatgaatctag 61
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 99 tttattaacatatatatgaatgtgggcaatgctagaa 135
||||||||||| ||||||||||||| ||||||||||
Sbjct: 73 tttattaacatcaatatgaatgtgggaaatgctagaa 109
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctag 79
||||||||||| |||||||||||||||||
Sbjct: 46 cacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||| |||||||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 69/84 (82%), Gaps = 6/84 (7%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||||||||||| ||||| ||||||||||| | || |||||||||| ||| ||||
Sbjct: 11 ccacattcatattgatgtcaatgaatctag------acatctgtctagattcattgacat 64
Query: 110 atatatgaatgtgggcaatgctag 133
||||||||||||| ||||||||
Sbjct: 65 caatatgaatgtgggaaatgctag 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| ||||| |||||||||||
Sbjct: 78 ccacattcatattgatgtcaatgaatctag 49
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 91 tgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||||| ||| |||| ||||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaa 33
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| ||||| |||||||||||
Sbjct: 45 ccacattcatattgatgtcaatgaatctag 74
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 cacattcatatagatgttaatgaatctag 79
||||||||||| |||||||||||||||||
Sbjct: 46 cacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||||| |||||||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 95 tagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaa 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatcta 78
|||||||||||| ||||||||||||||||
Sbjct: 90 ccacattcatattgatgttaatgaatcta 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 101 tattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaa 160
||||||||| |||||||||||| ||||||| || | |||||| | ||||| |||||||
Sbjct: 63 tattaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaa 4
Query: 161 gta 163
|||
Sbjct: 3 gta 1
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
||||||||||||| |||||||||| |||||| | | ||||| ||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtag 133
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatctag 79
||||||||||| |||||||||||||||||
Sbjct: 106 cacattcatattgatgttaatgaatctag 78
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtag 164
||||||||||||| |||||||||| | |||||| | ||||| ||||||||||
Sbjct: 63 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtag 115
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatcta 78
|||||| ||||||||||||||||||||||
Sbjct: 2 ccacatacatatagatgttaatgaatcta 30
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatcta 78
|||||| ||||||||||||||||||||||
Sbjct: 62 ccacatacatatagatgttaatgaatcta 34
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 acattcatatagatgttaatgaatctag 79
|||||||||| |||||||||||||||||
Sbjct: 81 acattcatattgatgttaatgaatctag 54
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||||||| |||| ||| ||||||||||||| |||||||||| | ||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttata 113
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||| |||||||||| | |||||| | ||||| |||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||| |||||||||| | |||||| | ||||| |||||||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 84 atatatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
|||||| | ||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatat 89
|||||||||||| |||||||||| |||||| || ||||||
Sbjct: 105 ccacattcatattgatgttaatgtatctagatagatatat 66
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaa 135
||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||||||||| ||||||
Sbjct: 19 ccacattcatattgatgttaatgtatctag 48
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 115 tgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagtagca 166
|||||||||| |||||||||| | |||||| | ||||| ||||||||||||
Sbjct: 87 tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtagca 138
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 93 tctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttata 144
|||||||| |||| ||| ||||||||||||| |||||||||| | ||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttata 24
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 112 atatgaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
||||||||||||| |||||||||| | |||||| | ||||| |||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 116 gaatgtgggcaatgctagaaagtcttataatatgaaatagaggaagta 163
|||| ||| |||||||||||||||||| | ||||||| | ||||||||
Sbjct: 52 gaatatggacaatgctagaaagtcttacattatgaaacataggaagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacat 85
|||||||||||| |||||||||||||| || |||||
Sbjct: 94 ccacattcatattgatgttaatgaatcaagatacat 59
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 97 gatttattaacatatatatgaatgtgggcaatgctagaa 135
|||| |||||||| ||||||||||||| ||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaa 33
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatc 76
|||||||||||| ||||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatc 71
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 51 cacattcatatagatgttaatgaatc 76
||||||||||| ||||||||||||||
Sbjct: 100 cacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctaggtacatatatatg 92
||||| |||| |||| |||||||| |||||||||||||||| | |||||||||
Sbjct: 106 ttctagcattttccatattcatattaatgttaatgaatctagatgaatatatatg 52
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctag 79
|||||||| |||||||||||||||||
Sbjct: 95 attcatattgatgttaatgaatctag 70
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
||||| |||| | ||||||||||| |||| ||||||||||||
Sbjct: 33 ttctagcatttttcacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||| ||||||||||||
Sbjct: 45 ccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 87 tatatgtctagatttattaacatatatatgaatgtgggcaatgctagaaagtcttataat 146
|||||||||||||| ||||||| |||||| ||| | | ||| |||||| | |||||| |
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 147 atgaaatagaggaagtag 164
||||| ||||||||||
Sbjct: 123 gtgaaacggaggaagtag 140
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaat 75
||||| |||| |||| |||||||| |||||||||||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctag 79
|||||||||||| |||| ||||||||||||
Sbjct: 103 ccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 106 acatatatatgaatgtgggcaatgctagaa 135
||||||||||||||| ||| ||||||||||
Sbjct: 62 acatatatatgaatgcgggaaatgctagaa 33
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 86 atatatgtctagatttattaacatatatatgaatgtgggcaatgctagaa 135
||||||||||||||| |||| | ||||||||||||| ||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctag 79
|||||||| |||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 69/84 (82%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||| ||||||| ||| ||||||||||||| | ||||| | |||||||| ||||| ||
Sbjct: 81 ccacgttcatattgatattaatgaatctagat---tatatctatctagattcattaatat 25
Query: 110 atatatgaatgtgggcaatgctag 133
||||||| ||||| ||||||||
Sbjct: 24 caatatgaacgtgggaaatgctag 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 69/84 (82%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 50 ccacattcatatagatgttaatgaatctaggtacatatatatgtctagatttattaacat 109
|||| ||||||| ||| ||||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 11 ccacgttcatattgatattaatgaatctagatagatata---atctagattcattaatat 67
Query: 110 atatatgaatgtgggcaatgctag 133
||||||| ||||| ||||||||
Sbjct: 68 caatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 38 ttctaacattgtccacattcatatagatgttaatgaatctag 79
|||||| |||| ||| || ||||||||| |||||||||||||
Sbjct: 33 ttctaatattgcccatatgcatatagatattaatgaatctag 74
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 cattgtccacattcatatagatgttaatga 73
|||| ||||||||||||| |||||||||||
Sbjct: 39 cattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 102 attaacatatatatgaatgtgggcaatgctagaa 135
|||||||| ||||||||||||| ||||||||||
Sbjct: 66 attaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctag 79
|||||||| |||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 54 attcatatagatgttaatgaatctag 79
|||||||| |||||||||||||||||
Sbjct: 96 attcatattgatgttaatgaatctag 71
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 102 attaacatatatatgaatgtgggcaatgctagaa 135
|||||||| ||||||||||||| ||||||||||
Sbjct: 69 attaacatcgatatgaatgtgggaaatgctagaa 102
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 attcatatagatgttaatgaatctag 79
|||||||| |||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctag 74
